Mercurial > repos > fubar > htseq_bams_to_count_matrix

changeset 21:349261fef17b draft

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Uploaded
author fubar
date Thu, 13 Jun 2013 06:23:54 -0400
parents 9aa25eb1365b
children fd07a014d2e7
files htseq_bams_to_count_matrix/tool_dependencies.xml
diffstat 1 files changed, 3 insertions(+), 3 deletions(-) [+]
line wrap: on
line diff
--- a/htseq_bams_to_count_matrix/tool_dependencies.xml	Thu Jun 13 05:58:30 2013 -0400
+++ b/htseq_bams_to_count_matrix/tool_dependencies.xml	Thu Jun 13 06:23:54 2013 -0400
@@ -22,9 +22,9 @@
                 </action>
                 <!-- install matplotlib -->
                 <action type="make_directory">$INSTALL_DIR/lib/python</action>
-                <action type="shell_command">export PYTHONPATH=$PYTHONPATH:$INSTALL_DIR/lib/python:$PYTHONPATH_NUMPY &amp;&amp; 
-                    export CPLUS_INCLUDE_PATH=$CPLUS_INCLUDE_PATH:$FREETYPE_INCLUDE_DIR:$FREETYPE_INCLUDE_DIR/freetype2/$CPLUS_INCLUDE_PATH &amp;&amp; 
-                    export LIBRARY_PATH=$FREETYPE_LIB_DIR &amp;&amp; 
+                <action type="shell_command">export PYTHONPATH=$INSTALL_DIR/lib/python:$PYTHONPATH_NUMPY:$PYTHONPATH &amp;&amp; 
+                    export CPLUS_INCLUDE_PATH=$FREETYPE_INCLUDE_DIR:$FREETYPE_INCLUDE_DIR/freetype2/$CPLUS_INCLUDE_PATH &amp;&amp; 
+                    export LIBRARY_PATH=$FREETYPE_LIB_DIR:$LIBRARY_PATH &amp;&amp; 
                     python setup.py install --home $INSTALL_DIR --install-scripts $INSTALL_DIR/bin</action>
                 <action type="set_environment">
                     <environment_variable action="append_to" name="PYTHONPATH">$INSTALL_DIR/lib/python</environment_variable>