# HG changeset patch # User fubar # Date 1371119523 14400 # Node ID fd07a014d2e746b0fc0ca826dfa336ac537d3524 # Parent 349261fef17bf7d552fba166313ba2bc85515075 Uploaded diff -r 349261fef17b -r fd07a014d2e7 htseq_bams_to_count_matrix/tool_dependencies.xml --- a/htseq_bams_to_count_matrix/tool_dependencies.xml Thu Jun 13 06:23:54 2013 -0400 +++ b/htseq_bams_to_count_matrix/tool_dependencies.xml Thu Jun 13 06:32:03 2013 -0400 @@ -23,7 +23,7 @@ $INSTALL_DIR/lib/python export PYTHONPATH=$INSTALL_DIR/lib/python:$PYTHONPATH_NUMPY:$PYTHONPATH && - export CPLUS_INCLUDE_PATH=$FREETYPE_INCLUDE_DIR:$FREETYPE_INCLUDE_DIR/freetype2/$CPLUS_INCLUDE_PATH && + export CPLUS_INCLUDE_PATH=$FREETYPE_INCLUDE_DIR:$FREETYPE_INCLUDE_DIR/freetype2/:$CPLUS_INCLUDE_PATH && export LIBRARY_PATH=$FREETYPE_LIB_DIR:$LIBRARY_PATH && python setup.py install --home $INSTALL_DIR --install-scripts $INSTALL_DIR/bin @@ -42,6 +42,14 @@ https://pypi.python.org/packages/source/H/HTSeq/HTSeq-0.5.4p3.tar.gz $INSTALL_DIR/lib/python $INSTALL_DIR/lib64/python + + + + + + + + export PYTHONPATH=$PYTHONPATH:$INSTALL_DIR/lib/python:$INSTALL_DIR/lib64/python && python setup.py install --home $INSTALL_DIR --install-scripts $INSTALL_DIR/bin $INSTALL_DIR/lib/python:$INSTALL_DIR/lib64/python