# HG changeset patch
# User fubar
# Date 1370521899 14400
# Node ID 6aa7ffe331c002e8fb855eeb04346c0dc949a86f
# Parent  f2310e26012f69dd000beafa7bf6105d6e7ef2db
Uploaded

diff -r f2310e26012f -r 6aa7ffe331c0 htseq_bams_to_count_matrix/htseqsams2mx.xml
--- a/htseq_bams_to_count_matrix/htseqsams2mx.xml	Thu Jun 06 08:18:03 2013 -0400
+++ b/htseq_bams_to_count_matrix/htseqsams2mx.xml	Thu Jun 06 08:31:39 2013 -0400
@@ -7,7 +7,7 @@
     htseqsams2mx.py -g "$gfffile" -o "$outfile" -m "$model" --id_attribute "$id_attr" --feature_type "$feature_type"
     --samf "'$firstsamf','${firstsamf.name}'"
     #for $s in $samfiles:
-    --samf "'${s.samf}','${s.samf.name}'"
+    --samf "'${s.samf}','${s.samf.name}'" 
     #end for
     </command>
   <inputs>