# HG changeset patch
# User fubar
# Date 1385075149 18000
# Node ID 58fe9656873abdae7bc848d033466f8ae99432e8
# Parent  edda3a085658a6a4556ffdf447124ab8958190ee
Uploaded

diff -r edda3a085658 -r 58fe9656873a tool_dependencies.xml
--- a/tool_dependencies.xml	Thu Nov 21 17:56:05 2013 -0500
+++ b/tool_dependencies.xml	Thu Nov 21 18:05:49 2013 -0500
@@ -9,8 +9,7 @@
     <package name="htseq" version="0.5.4p3">
         <install version="1.0">
             <actions>
-                <action type="make_directory">$INSTALL_DIR/lib/python</action> <!-- Not sure why these must be made apriori, but install fails otherwise -->
-                <action type="make_directory">$INSTALL_DIR/lib64/python</action> <!-- Not sure why these must be made apriori, but install fails otherwise -->
+                <action type="download_by_url">https://pypi.python.org/packages/source/H/HTSeq/HTSeq-0.5.4p3.tar.gz</action>
                 <action type="set_environment_for_install">
                         <repository changeset_revision="247e5e5bee87" name="package_pysam_0_7_6" owner="iuc" toolshed="http://testtoolshed.g2.bx.psu.edu">
                             <package name="pysam" version="0.7.6" />
@@ -19,7 +18,8 @@
                             <package name="matplotlib" version="1.2.1" />
                         </repository>
                 </action>
-                <action type="download_by_url">https://pypi.python.org/packages/source/H/HTSeq/HTSeq-0.5.4p3.tar.gz</action>
+                <action type="make_directory">$INSTALL_DIR/lib/python</action> <!-- Not sure why these must be made apriori, but install fails otherwise -->
+                <action type="make_directory">$INSTALL_DIR/lib64/python</action> <!-- Not sure why these must be made apriori, but install fails otherwise -->
                 <action type="shell_command">export PYTHONPATH=$PYTHONPATH:$INSTALL_DIR/lib/python:$INSTALL_DIR/lib64/python &amp;&amp; python setup.py install --home $INSTALL_DIR --install-scripts $INSTALL_DIR/bin</action>
                 <action type="set_environment">
                     <environment_variable action="append_to" name="PYTHONPATH">$INSTALL_DIR/lib/python:$INSTALL_DIR/lib64/python</environment_variable>