Mercurial > repos > fubar > htseq_bams_to_count_matrix

comparison test-data/generatetest.sh @ 43:390cb852aae7 draft

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author fubar
date Thu, 21 Nov 2013 17:39:01 -0500
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42:5c783df4f31c 43:390cb852aae7
1 #python ../htseqsams2mx.py -g rn4_chr20_100k.gtf -o test.xls --samf "'rn4chr20test1.bam','col1'" --samf "'rn4chr20test2.bam','col2'"
2 python ../htseqsams2mx.py -g rn4_chr20_100k.gtf -o htseqsams2mx_test1_out.xls --samf "'rn4chr20test1.bam',''" --samf "'rn4chr20test2.bam',''"