Mercurial > repos > fubar > edger_test

diff rgedgeR/rgedgeRpaired.xml @ 4:dea65c85afb4 draft

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Uploaded
author fubar
date Wed, 12 Jun 2013 03:45:24 -0400
parents 82e0af566160
children 06e51c47590d
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--- a/rgedgeR/rgedgeRpaired.xml	Wed Jun 12 03:02:29 2013 -0400
+++ b/rgedgeR/rgedgeRpaired.xml	Wed Jun 12 03:45:24 2013 -0400
@@ -1,5 +1,11 @@
-<tool id="rgedgeRpaired" name="edgeR paired" version="0.18">
-  <description>2 level Anova for counts</description>
+<tool id="rgedgeRpaired" name="edgeR" version="0.18">
+  <description>1 or 2 level models for count data</description>
+  <requirements>
+      <requirement type="package" version="6.2">">name=package_readline_6_2</requirement>
+      <requirement type="package" version="3.0.1">">name=package_R</requirement>
+      <requirement type="package" version="2.12">">name=package_BioCBasics</requirement>
+  </requirements>
+  
   <command interpreter="python">
      rgToolFactory.py --script_path "$runme" --interpreter "Rscript" --tool_name "edgeR" 
     --output_dir "$html_file.files_path" --output_html "$html_file" --output_tab "$outtab" --make_HTML "yes"