# HG changeset patch # User fubar # Date 1414104638 14400 # Node ID b0d21688db8ea18030b0a08a2c61d698b284b503 # Parent badcd3b0e708a2867f93c5f201bc287ccad79851 Uploaded diff -r badcd3b0e708 -r b0d21688db8e rgedgeRpaired_nocamera.xml --- a/rgedgeRpaired_nocamera.xml Thu Oct 23 01:31:34 2014 -0400 +++ b/rgedgeRpaired_nocamera.xml Thu Oct 23 18:50:38 2014 -0400 @@ -1,7 +1,6 @@ <tool id="rgDifferentialCount" name="Differential_Count" version="0.26"> <description>models using BioConductor packages</description> <requirements> - <requirement type="package" version="2.9.1">libxml2</requirement> <requirement type="package" version="3.1.1">R_3_1_1</requirement> <requirement type="package" version="1.3.18">graphicsmagick</requirement> <requirement type="package" version="9.10">ghostscript</requirement> <package name="libxml2" version="2.9.1"> diff -r badcd3b0e708 -r b0d21688db8e tool_dependencies.xml --- a/tool_dependencies.xml Thu Oct 23 01:31:34 2014 -0400 +++ b/tool_dependencies.xml Thu Oct 23 18:50:38 2014 -0400 @@ -1,7 +1,7 @@ <?xml version="1.0"?> <tool_dependency> <package name="R_3_1_1" version="3.1.1"> - <repository changeset_revision="6ca21e466ef6" name="package_r_3_1_1" owner="fubar" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" /> + <repository changeset_revision="d9964efbfbe3" name="package_r_3_1_1" owner="fubar" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" /> </package> <package name="graphicsmagick" version="1.3.18"> <repository changeset_revision="2fd4eb971ba5" name="package_graphicsmagick_1_3" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" /> @@ -9,15 +9,12 @@ <package name="ghostscript" version="9.10"> <repository changeset_revision="9345d2740f0c" name="package_ghostscript_9_10" owner="devteam" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" /> </package> - <package name="libxml2" version="2.9.1"> - <repository changeset_revision="926b471a2e43" name="package_libxml2_2_9_1" owner="devteam" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" /> - </package> <package name="biocbasics" version="2.14"> <install version="1.0"> <actions> <action type="setup_r_environment"> - <repository changeset_revision="6ca21e466ef6" name="package_r_3_1_1" owner="fubar" toolshed="https://testtoolshed.g2.bx.psu.edu"> + <repository changeset_revision="d9964efbfbe3" name="package_r_3_1_1" owner="fubar" toolshed="https://testtoolshed.g2.bx.psu.edu"> <package name="R_3_1_1" version="3.1.1" /> </repository> <package>https://github.com/fubar2/galaxy_tool_source/blob/master/RELEASE_2_14/getopt_1.20.0.tar.gz?raw=true</package>