# HG changeset patch
# User fubar
# Date 1387693949 18000
# Node ID 8051d14cf81947ba3040bf7ddd7601f64c519905
# Parent 5b6af671d9853adca32c473d2bb4d997150b2f5d
update with better filtering
diff -r 5b6af671d985 -r 8051d14cf819 differential_count_models/rgToolFactory.py
--- a/differential_count_models/rgToolFactory.py Thu Aug 08 20:04:16 2013 -0400
+++ /dev/null Thu Jan 01 00:00:00 1970 +0000
@@ -1,631 +0,0 @@
-# rgToolFactory.py
-# see https://bitbucket.org/fubar/galaxytoolfactory/wiki/Home
-#
-# copyright ross lazarus (ross stop lazarus at gmail stop com) May 2012
-#
-# all rights reserved
-# Licensed under the LGPL
-# suggestions for improvement and bug fixes welcome at https://bitbucket.org/fubar/galaxytoolfactory/wiki/Home
-#
-# august 2013
-# found a problem with GS if $TMP or $TEMP missing - now inject /tmp and warn
-#
-# july 2013
-# added ability to combine images and individual log files into html output
-# just make sure there's a log file foo.log and it will be output
-# together with all images named like "foo_*.pdf
-# otherwise old format for html
-#
-# January 2013
-# problem pointed out by Carlos Borroto
-# added escaping for <>$ - thought I did that ages ago...
-#
-# August 11 2012
-# changed to use shell=False and cl as a sequence
-
-# This is a Galaxy tool factory for simple scripts in python, R or whatever ails ye.
-# It also serves as the wrapper for the new tool.
-#
-# you paste and run your script
-# Only works for simple scripts that read one input from the history.
-# Optionally can write one new history dataset,
-# and optionally collect any number of outputs into links on an autogenerated HTML page.
-
-# DO NOT install on a public or important site - please.
-
-# installed generated tools are fine if the script is safe.
-# They just run normally and their user cannot do anything unusually insecure
-# but please, practice safe toolshed.
-# Read the fucking code before you install any tool
-# especially this one
-
-# After you get the script working on some test data, you can
-# optionally generate a toolshed compatible gzip file
-# containing your script safely wrapped as an ordinary Galaxy script in your local toolshed for
-# safe and largely automated installation in a production Galaxy.
-
-# If you opt for an HTML output, you get all the script outputs arranged
-# as a single Html history item - all output files are linked, thumbnails for all the pdfs.
-# Ugly but really inexpensive.
-#
-# Patches appreciated please.
-#
-#
-# long route to June 2012 product
-# Behold the awesome power of Galaxy and the toolshed with the tool factory to bind them
-# derived from an integrated script model
-# called rgBaseScriptWrapper.py
-# Note to the unwary:
-# This tool allows arbitrary scripting on your Galaxy as the Galaxy user
-# There is nothing stopping a malicious user doing whatever they choose
-# Extremely dangerous!!
-# Totally insecure. So, trusted users only
-#
-# preferred model is a developer using their throw away workstation instance - ie a private site.
-# no real risk. The universe_wsgi.ini admin_users string is checked - only admin users are permitted to run this tool.
-#
-
-import sys
-import shutil
-import subprocess
-import os
-import time
-import tempfile
-import optparse
-import tarfile
-import re
-import shutil
-import math
-
-progname = os.path.split(sys.argv[0])[1]
-myversion = 'V000.2 June 2012'
-verbose = False
-debug = False
-toolFactoryURL = 'https://bitbucket.org/fubar/galaxytoolfactory'
-
-def timenow():
- """return current time as a string
- """
- return time.strftime('%d/%m/%Y %H:%M:%S', time.localtime(time.time()))
-
-html_escape_table = {
- "&": "&",
- ">": ">",
- "<": "<",
- "$": "\$"
- }
-
-def html_escape(text):
- """Produce entities within text."""
- return "".join(html_escape_table.get(c,c) for c in text)
-
-def cmd_exists(cmd):
- return subprocess.call("type " + cmd, shell=True,
- stdout=subprocess.PIPE, stderr=subprocess.PIPE) == 0
-
-
-class ScriptRunner:
- """class is a wrapper for an arbitrary script
- """
-
- def __init__(self,opts=None,treatbashSpecial=True):
- """
- cleanup inputs, setup some outputs
-
- """
- self.useGM = cmd_exists('gm')
- self.useIM = cmd_exists('convert')
- self.useGS = cmd_exists('gs')
- self.temp_warned = False # we want only one warning if $TMP not set
- self.treatbashSpecial = treatbashSpecial
- if opts.output_dir: # simplify for the tool tarball
- os.chdir(opts.output_dir)
- self.thumbformat = 'png'
- self.opts = opts
- self.toolname = re.sub('[^a-zA-Z0-9_]+', '', opts.tool_name) # a sanitizer now does this but..
- self.toolid = self.toolname
- self.myname = sys.argv[0] # get our name because we write ourselves out as a tool later
- self.pyfile = self.myname # crude but efficient - the cruft won't hurt much
- self.xmlfile = '%s.xml' % self.toolname
- s = open(self.opts.script_path,'r').readlines()
- s = [x.rstrip() for x in s] # remove pesky dos line endings if needed
- self.script = '\n'.join(s)
- fhandle,self.sfile = tempfile.mkstemp(prefix=self.toolname,suffix=".%s" % (opts.interpreter))
- tscript = open(self.sfile,'w') # use self.sfile as script source for Popen
- tscript.write(self.script)
- tscript.close()
- self.indentedScript = '\n'.join([' %s' % x for x in s]) # for restructured text in help
- self.escapedScript = '\n'.join([html_escape(x) for x in s])
- self.elog = os.path.join(self.opts.output_dir,"%s_error.log" % self.toolname)
- if opts.output_dir: # may not want these complexities
- self.tlog = os.path.join(self.opts.output_dir,"%s_runner.log" % self.toolname)
- art = '%s.%s' % (self.toolname,opts.interpreter)
- artpath = os.path.join(self.opts.output_dir,art) # need full path
- artifact = open(artpath,'w') # use self.sfile as script source for Popen
- artifact.write(self.script)
- artifact.close()
- self.cl = []
- self.html = []
- a = self.cl.append
- a(opts.interpreter)
- if self.treatbashSpecial and opts.interpreter in ['bash','sh']:
- a(self.sfile)
- else:
- a('-') # stdin
- a(opts.input_tab)
- a(opts.output_tab)
- self.outFormats = 'tabular' # TODO make this an option at tool generation time
- self.inputFormats = 'tabular' # TODO make this an option at tool generation time
- self.test1Input = '%s_test1_input.xls' % self.toolname
- self.test1Output = '%s_test1_output.xls' % self.toolname
- self.test1HTML = '%s_test1_output.html' % self.toolname
-
- def makeXML(self):
- """
- Create a Galaxy xml tool wrapper for the new script as a string to write out
- fixme - use templating or something less fugly than this example of what we produce
-
-
- a tabular file
-
- reverse.py --script_path "$runMe" --interpreter "python"
- --tool_name "reverse" --input_tab "$input1" --output_tab "$tab_file"
-
-
-
-
-
-
-
-**What it Does**
-
-Reverse the columns in a tabular file
-
-
-
-
-
-# reverse order of columns in a tabular file
-import sys
-inp = sys.argv[1]
-outp = sys.argv[2]
-i = open(inp,'r')
-o = open(outp,'w')
-for row in i:
- rs = row.rstrip().split('\t')
- rs.reverse()
- o.write('\t'.join(rs))
- o.write('\n')
-i.close()
-o.close()
-
-
-
-
-
-
- """
- newXML="""
- %(tooldesc)s
- %(command)s
-
- %(inputs)s
-
-
- %(outputs)s
-
-
-
- %(script)s
-
-
- %(tooltests)s
-
- %(help)s
-
- """ # needs a dict with toolname, toolid, interpreter, scriptname, command, inputs as a multi line string ready to write, outputs ditto, help ditto
-
- newCommand="""
- %(toolname)s.py --script_path "$runMe" --interpreter "%(interpreter)s"
- --tool_name "%(toolname)s" %(command_inputs)s %(command_outputs)s
- """ # may NOT be an input or htmlout
- tooltestsTabOnly = """
-
-
- %s ' % self.opts.tool_desc
- else:
- xdict['tooldesc'] = ''
- xdict['command_outputs'] = ''
- xdict['outputs'] = ''
- if self.opts.input_tab <> 'None':
- xdict['command_inputs'] = '--input_tab "$input1" ' # the space may matter a lot if we append something
- xdict['inputs'] = '
- """
- galhtmlattr = """
"""
- galhtmlpostfix = """
Galaxy Tool "%s" run at %s
%s %s %s %s %s images and outputs
' % sectionname)
- html.append('(Click on a thumbnail image to download the corresponding original PDF image)\n')
- for i,paths in enumerate(ourpdfs):
- fname,thumb = paths
- s= """ \n'
- ntogo = 0
- if i < (npdf - 1): # more to come
- s += ''
- ntogo = nacross
- else:
- ntogo -= 1
- html.append(s)
- if html[-1].strip().endswith(' '):
- html.append('
'*ntogo)
- html.append('\n')
- logt = open(logfname,'r').readlines()
- logtext = [x for x in logt if x.strip() > '']
- html.append('%s log output
' % sectionname)
- if len(logtext) > 1:
- html.append('\n\n')
- html += logtext
- html.append('\n \n')
- else:
- html.append('%s is emptyOutput File Name (click to view) Size
All output files available for downloading
\n')
- html += fhtml # add all non-pdf files to the end of the display
- else:
- html.append('### Error - %s returned no files - please confirm that parameters are sane
' % self.opts.interpreter)
- html.append(galhtmlpostfix)
- htmlf = file(self.opts.output_html,'w')
- htmlf.write('\n'.join(html))
- htmlf.write('\n')
- htmlf.close()
- self.html = html
-
-
- def run(self):
- """
- scripts must be small enough not to fill the pipe!
- """
- if self.treatbashSpecial and self.opts.interpreter in ['bash','sh']:
- retval = self.runBash()
- else:
- if self.opts.output_dir:
- ste = open(self.elog,'w')
- sto = open(self.tlog,'w')
- sto.write('## Toolfactory generated command line = %s\n' % ' '.join(self.cl))
- sto.flush()
- p = subprocess.Popen(self.cl,shell=False,stdout=sto,stderr=ste,stdin=subprocess.PIPE,cwd=self.opts.output_dir)
- else:
- p = subprocess.Popen(self.cl,shell=False,stdin=subprocess.PIPE)
- p.stdin.write(self.script)
- p.stdin.close()
- retval = p.wait()
- if self.opts.output_dir:
- sto.close()
- ste.close()
- err = open(self.elog,'r').readlines()
- if retval <> 0 and err: # problem
- print >> sys.stderr,err
- if self.opts.make_HTML:
- self.makeHtml()
- return retval
-
- def runBash(self):
- """
- cannot use - for bash so use self.sfile
- """
- if self.opts.output_dir:
- s = '## Toolfactory generated command line = %s\n' % ' '.join(self.cl)
- sto = open(self.tlog,'w')
- sto.write(s)
- sto.flush()
- p = subprocess.Popen(self.cl,shell=False,stdout=sto,stderr=sto,cwd=self.opts.output_dir)
- else:
- p = subprocess.Popen(self.cl,shell=False)
- retval = p.wait()
- if self.opts.output_dir:
- sto.close()
- if self.opts.make_HTML:
- self.makeHtml()
- return retval
-
-
-def main():
- u = """
- This is a Galaxy wrapper. It expects to be called by a special purpose tool.xml as:
- rgBaseScriptWrapper.py --script_path "$scriptPath" --tool_name "foo" --interpreter "Rscript"
-
- """
- op = optparse.OptionParser()
- a = op.add_option
- a('--script_path',default=None)
- a('--tool_name',default=None)
- a('--interpreter',default=None)
- a('--output_dir',default=None)
- a('--output_html',default=None)
- a('--input_tab',default="None")
- a('--output_tab',default="None")
- a('--user_email',default='Unknown')
- a('--bad_user',default=None)
- a('--make_Tool',default=None)
- a('--make_HTML',default=None)
- a('--help_text',default=None)
- a('--tool_desc',default=None)
- a('--new_tool',default=None)
- a('--tool_version',default=None)
- opts, args = op.parse_args()
- assert not opts.bad_user,'UNAUTHORISED: %s is NOT authorized to use this tool until Galaxy admin adds %s to admin_users in universe_wsgi.ini' % (opts.bad_user,opts.bad_user)
- assert opts.tool_name,'## Tool Factory expects a tool name - eg --tool_name=DESeq'
- assert opts.interpreter,'## Tool Factory wrapper expects an interpreter - eg --interpreter=Rscript'
- assert os.path.isfile(opts.script_path),'## Tool Factory wrapper expects a script path - eg --script_path=foo.R'
- if opts.output_dir:
- try:
- os.makedirs(opts.output_dir)
- except:
- pass
- r = ScriptRunner(opts)
- if opts.make_Tool:
- retcode = r.makeTooltar()
- else:
- retcode = r.run()
- os.unlink(r.sfile)
- if retcode:
- sys.exit(retcode) # indicate failure to job runner
-
-
-if __name__ == "__main__":
- main()
-
-
diff -r 5b6af671d985 -r 8051d14cf819 differential_count_models/rgedgeRpaired_nocamera.xml
--- a/differential_count_models/rgedgeRpaired_nocamera.xml Thu Aug 08 20:04:16 2013 -0400
+++ /dev/null Thu Jan 01 00:00:00 1970 +0000
@@ -1,1074 +0,0 @@
-
- models using BioConductor packages
-
- biocbasics
- r3
- graphicsmagick
- ghostscript
-
-
-
- rgToolFactory.py --script_path "$runme" --interpreter "Rscript" --tool_name "DifferentialCounts"
- --output_dir "$html_file.files_path" --output_html "$html_file" --make_HTML "yes"
-
-
-
-
-
-
-
-
-
- Do not run edgeR
- Run edgeR
-
-
-
-
-
- Do not run DESeq2
- Run DESeq2
-
-
- Parametric (default) fit for dispersions
- Local fit - this will automagically be used if parametric fit fails
- Mean dispersion fit- use this if you really understand what you're doing - read the fine manual linked below in the documentation
-
-
-
-
- Do not run VOOM
- Run VOOM
-
-
- fdr
- Benjamini Hochberg
- Benjamini Yukateli
- Bonferroni
- Hochberg
- Holm
- Hommel
- no control for multiple tests
-
-
-
-
- edgeR['doedgeR'] == "T"
-
-
- DESeq2['doDESeq2'] == "T"
-
-
- doVoom == "T"
-
-
-
-
-
-
-
-
-
-
-
- nsamp) {
- dm =dm[1:nsamp,]
- #sub = paste('Showing',nsamp,'contigs ranked for evidence for differential abundance out of',nprobes,'total')
- }
- newcolnames = substr(colnames(dm),1,20)
- colnames(dm) = newcolnames
- pdf(outpdfname)
- heatmap.2(dm,main=myTitle,ColSideColors=pcols,col=topo.colors(100),dendrogram="col",key=T,density.info='none',
- Rowv=F,scale='row',trace='none',margins=c(8,8),cexRow=0.4,cexCol=0.5)
- dev.off()
-}
-
-hmap = function(cmat,nmeans=4,outpdfname="heatMap.pdf",nsamp=250,TName='Treatment',group=NA,myTitle="Title goes here")
-{
- # for 2 groups only was
- #col.map = function(g) {if (g==TName) "#FF0000" else "#0000FF"}
- #pcols = unlist(lapply(group,col.map))
- gu = unique(group)
- colours = rainbow(length(gu),start=0.3,end=0.6)
- pcols = colours[match(group,gu)]
- nrows = nrow(cmat)
- mtitle = paste(myTitle,'Heatmap: n contigs =',nrows)
- if (nrows > nsamp) {
- cmat = cmat[c(1:nsamp),]
- mtitle = paste('Heatmap: Top ',nsamp,' DE contigs (of ',nrows,')',sep='')
- }
- newcolnames = substr(colnames(cmat),1,20)
- colnames(cmat) = newcolnames
- pdf(outpdfname)
- heatmap(cmat,scale='row',main=mtitle,cexRow=0.3,cexCol=0.4,Rowv=NA,ColSideColors=pcols)
- dev.off()
-}
-
-qqPlot = function(descr='qqplot',pvector, outpdf='qqplot.pdf',...)
-# stolen from https://gist.github.com/703512
-{
- o = -log10(sort(pvector,decreasing=F))
- e = -log10( 1:length(o)/length(o) )
- o[o==-Inf] = reallysmall
- o[o==Inf] = reallybig
- maint = descr
- pdf(outpdf)
- plot(e,o,pch=19,cex=1, main=maint, ...,
- xlab=expression(Expected~~-log[10](italic(p))),
- ylab=expression(Observed~~-log[10](italic(p))),
- xlim=c(0,max(e)), ylim=c(0,max(o)))
- lines(e,e,col="red")
- grid(col = "lightgray", lty = "dotted")
- dev.off()
-}
-
-smearPlot = function(DGEList,deTags, outSmear, outMain)
- {
- pdf(outSmear)
- plotSmear(DGEList,de.tags=deTags,main=outMain)
- grid(col="lightgray", lty="dotted")
- dev.off()
- }
-
-boxPlot = function(rawrs,cleanrs,maint,myTitle,pdfname)
-{ #
- nc = ncol(rawrs)
- for (i in c(1:nc)) {rawrs[(rawrs[,i] < 0),i] = NA}
- fullnames = colnames(rawrs)
- newcolnames = substr(colnames(rawrs),1,20)
- colnames(rawrs) = newcolnames
- newcolnames = substr(colnames(cleanrs),1,20)
- colnames(cleanrs) = newcolnames
- defpar = par(no.readonly=T)
- print.noquote('raw contig counts by sample:')
- print.noquote(summary(rawrs))
- print.noquote('normalised contig counts by sample:')
- print.noquote(summary(cleanrs))
- pdf(pdfname)
- par(mfrow=c(1,2))
- boxplot(rawrs,varwidth=T,notch=T,ylab='log contig count',col="maroon",las=3,cex.axis=0.35,main=paste('Raw:',maint))
- grid(col="lightgray",lty="dotted")
- boxplot(cleanrs,varwidth=T,notch=T,ylab='log contig count',col="maroon",las=3,cex.axis=0.35,main=paste('After ',maint))
- grid(col="lightgray",lty="dotted")
- dev.off()
- pdfname = "sample_counts_histogram.pdf"
- nc = ncol(rawrs)
- print.noquote(paste('Using ncol rawrs=',nc))
- ncroot = round(sqrt(nc))
- if (ncroot*ncroot < nc) { ncroot = ncroot + 1 }
- m = c()
- for (i in c(1:nc)) {
- rhist = hist(rawrs[,i],breaks=100,plot=F)
- m = append(m,max(rhist\$counts))
- }
- ymax = max(m)
- ncols = length(fullnames)
- if (ncols > 20)
- {
- scale = 7*ncols/20
- pdf(pdfname,width=scale,height=scale)
- } else {
- pdf(pdfname)
- }
- par(mfrow=c(ncroot,ncroot))
- for (i in c(1:nc)) {
- hist(rawrs[,i], main=paste("Contig logcount",i), xlab='log raw count', col="maroon",
- breaks=100,sub=fullnames[i],cex=0.8,ylim=c(0,ymax))
- }
- dev.off()
- par(defpar)
-
-}
-
-cumPlot = function(rawrs,cleanrs,maint,myTitle)
-{ # updated to use ecdf
- pdfname = "Filtering_rowsum_bar_charts.pdf"
- defpar = par(no.readonly=T)
- lrs = log(rawrs,10)
- lim = max(lrs)
- pdf(pdfname)
- par(mfrow=c(2,1))
- hist(lrs,breaks=100,main=paste('Before:',maint),xlab="# Reads (log)",
- ylab="Count",col="maroon",sub=myTitle, xlim=c(0,lim),las=1)
- grid(col="lightgray", lty="dotted")
- lrs = log(cleanrs,10)
- hist(lrs,breaks=100,main=paste('After:',maint),xlab="# Reads (log)",
- ylab="Count",col="maroon",sub=myTitle,xlim=c(0,lim),las=1)
- grid(col="lightgray", lty="dotted")
- dev.off()
- par(defpar)
-}
-
-cumPlot1 = function(rawrs,cleanrs,maint,myTitle)
-{ # updated to use ecdf
- pdfname = paste(gsub(" ","", myTitle , fixed=TRUE),"RowsumCum.pdf",sep='_')
- pdf(pdfname)
- par(mfrow=c(2,1))
- lastx = max(rawrs)
- rawe = knots(ecdf(rawrs))
- cleane = knots(ecdf(cleanrs))
- cy = 1:length(cleane)/length(cleane)
- ry = 1:length(rawe)/length(rawe)
- plot(rawe,ry,type='l',main=paste('Before',maint),xlab="Log Contig Total Reads",
- ylab="Cumulative proportion",col="maroon",log='x',xlim=c(1,lastx),sub=myTitle)
- grid(col="blue")
- plot(cleane,cy,type='l',main=paste('After',maint),xlab="Log Contig Total Reads",
- ylab="Cumulative proportion",col="maroon",log='x',xlim=c(1,lastx),sub=myTitle)
- grid(col="blue")
- dev.off()
-}
-
-
-
-doGSEAold = function(y=NULL,design=NULL,histgmt="",
- bigmt="/data/genomes/gsea/3.1/Abetterchoice_nocgp_c2_c3_c5_symbols_all.gmt",
- ntest=0, myTitle="myTitle", outfname="GSEA.xls", minnin=5, maxnin=2000,fdrthresh=0.05,fdrtype="BH")
-{
- sink('Camera.log')
- genesets = c()
- if (bigmt > "")
- {
- bigenesets = readLines(bigmt)
- genesets = bigenesets
- }
- if (histgmt > "")
- {
- hgenesets = readLines(histgmt)
- if (bigmt > "") {
- genesets = rbind(genesets,hgenesets)
- } else {
- genesets = hgenesets
- } # use only history if no bi
- }
- print.noquote(paste("@@@read",length(genesets), 'genesets from',histgmt,bigmt))
- genesets = strsplit(genesets,'\t') # tabular. genesetid\tURLorwhatever\tgene_1\t..\tgene_n
- outf = outfname
- head=paste(myTitle,'edgeR GSEA')
- write(head,file=outfname,append=F)
- ntest=length(genesets)
- urownames = toupper(rownames(y))
- upcam = c()
- downcam = c()
- for (i in 1:ntest) {
- gs = unlist(genesets[i])
- g = gs[1] # geneset_id
- u = gs[2]
- if (u > "") { u = paste("",u," ",sep="") }
- glist = gs[3:length(gs)] # member gene symbols
- glist = toupper(glist)
- inglist = urownames %in% glist
- nin = sum(inglist)
- if ((nin > minnin) && (nin < maxnin)) {
- ### print(paste('@@found',sum(inglist),'genes in glist'))
- camres = camera(y=y,index=inglist,design=design)
- if (! is.null(camres)) {
- rownames(camres) = g # gene set name
- camres = cbind(GeneSet=g,URL=u,camres)
- if (camres\$Direction == "Up")
- {
- upcam = rbind(upcam,camres) } else {
- downcam = rbind(downcam,camres)
- }
- }
- }
- }
- uscam = upcam[order(upcam\$PValue),]
- unadjp = uscam\$PValue
- uscam\$adjPValue = p.adjust(unadjp,method=fdrtype)
- nup = max(10,sum((uscam\$adjPValue < fdrthresh)))
- dscam = downcam[order(downcam\$PValue),]
- unadjp = dscam\$PValue
- dscam\$adjPValue = p.adjust(unadjp,method=fdrtype)
- ndown = max(10,sum((dscam\$adjPValue < fdrthresh)))
- write.table(uscam,file=paste('camera_up',outfname,sep='_'),quote=F,sep='\t',row.names=F)
- write.table(dscam,file=paste('camera_down',outfname,sep='_'),quote=F,sep='\t',row.names=F)
- print.noquote(paste('@@@@@ Camera up top',nup,'gene sets:'))
- write.table(head(uscam,nup),file="",quote=F,sep='\t',row.names=F)
- print.noquote(paste('@@@@@ Camera down top',ndown,'gene sets:'))
- write.table(head(dscam,ndown),file="",quote=F,sep='\t',row.names=F)
- sink()
-}
-
-
-
-
-doGSEA = function(y=NULL,design=NULL,histgmt="",
- bigmt="/data/genomes/gsea/3.1/Abetterchoice_nocgp_c2_c3_c5_symbols_all.gmt",
- ntest=0, myTitle="myTitle", outfname="GSEA.xls", minnin=5, maxnin=2000,fdrthresh=0.05,fdrtype="BH")
-{
- sink('Camera.log')
- genesets = c()
- if (bigmt > "")
- {
- bigenesets = readLines(bigmt)
- genesets = bigenesets
- }
- if (histgmt > "")
- {
- hgenesets = readLines(histgmt)
- if (bigmt > "") {
- genesets = rbind(genesets,hgenesets)
- } else {
- genesets = hgenesets
- } # use only history if no bi
- }
- print.noquote(paste("@@@read",length(genesets), 'genesets from',histgmt,bigmt))
- genesets = strsplit(genesets,'\t') # tabular. genesetid\tURLorwhatever\tgene_1\t..\tgene_n
- outf = outfname
- head=paste(myTitle,'edgeR GSEA')
- write(head,file=outfname,append=F)
- ntest=length(genesets)
- urownames = toupper(rownames(y))
- upcam = c()
- downcam = c()
- incam = c()
- urls = c()
- gsids = c()
- for (i in 1:ntest) {
- gs = unlist(genesets[i])
- gsid = gs[1] # geneset_id
- url = gs[2]
- if (url > "") { url = paste("",url," ",sep="") }
- glist = gs[3:length(gs)] # member gene symbols
- glist = toupper(glist)
- inglist = urownames %in% glist
- nin = sum(inglist)
- if ((nin > minnin) && (nin < maxnin)) {
- incam = c(incam,inglist)
- gsids = c(gsids,gsid)
- urls = c(urls,url)
- }
- }
- incam = as.list(incam)
- names(incam) = gsids
- allcam = camera(y=y,index=incam,design=design)
- allcamres = cbind(geneset=gsids,allcam,URL=urls)
- for (i in 1:ntest) {
- camres = allcamres[i]
- res = try(test = (camres\$Direction == "Up"))
- if ("try-error" %in% class(res)) {
- cat("test failed, camres = :")
- print.noquote(camres)
- } else { if (camres\$Direction == "Up")
- { upcam = rbind(upcam,camres)
- } else { downcam = rbind(downcam,camres)
- }
-
- }
- }
- uscam = upcam[order(upcam\$PValue),]
- unadjp = uscam\$PValue
- uscam\$adjPValue = p.adjust(unadjp,method=fdrtype)
- nup = max(10,sum((uscam\$adjPValue < fdrthresh)))
- dscam = downcam[order(downcam\$PValue),]
- unadjp = dscam\$PValue
- dscam\$adjPValue = p.adjust(unadjp,method=fdrtype)
- ndown = max(10,sum((dscam\$adjPValue < fdrthresh)))
- write.table(uscam,file=paste('camera_up',outfname,sep='_'),quote=F,sep='\t',row.names=F)
- write.table(dscam,file=paste('camera_down',outfname,sep='_'),quote=F,sep='\t',row.names=F)
- print.noquote(paste('@@@@@ Camera up top',nup,'gene sets:'))
- write.table(head(uscam,nup),file="",quote=F,sep='\t',row.names=F)
- print.noquote(paste('@@@@@ Camera down top',ndown,'gene sets:'))
- write.table(head(dscam,ndown),file="",quote=F,sep='\t',row.names=F)
- sink()
- }
-
-
-edgeIt = function (Count_Matrix=c(),group=c(),out_edgeR=F,out_VOOM=F,out_DESeq2=F,fdrtype='fdr',priordf=5,
- fdrthresh=0.05,outputdir='.', myTitle='Differential Counts',libSize=c(),useNDF=F,
- filterquantile=0.2, subjects=c(),mydesign=NULL,
- doDESeq2=T,doVoom=T,doCamera=T,doedgeR=T,org='hg19',
- histgmt="", bigmt="/data/genomes/gsea/3.1/Abetterchoice_nocgp_c2_c3_c5_symbols_all.gmt",
- doCook=F,DESeq_fitType="parameteric")
-{
- # Error handling
- if (length(unique(group))!=2){
- print("Number of conditions identified in experiment does not equal 2")
- q()
- }
- require(edgeR)
- options(width = 512)
- mt = paste(unlist(strsplit(myTitle,'_')),collapse=" ")
- allN = nrow(Count_Matrix)
- nscut = round(ncol(Count_Matrix)/2)
- colTotmillionreads = colSums(Count_Matrix)/1e6
- counts.dataframe = as.data.frame(c())
- rawrs = rowSums(Count_Matrix)
- nonzerod = Count_Matrix[(rawrs > 0),] # remove all zero count genes
- nzN = nrow(nonzerod)
- nzrs = rowSums(nonzerod)
- zN = allN - nzN
- print('# Quantiles for non-zero row counts:',quote=F)
- print(quantile(nzrs,probs=seq(0,1,0.1)),quote=F)
- if (useNDF == T)
- {
- gt1rpin3 = rowSums(Count_Matrix/expandAsMatrix(colTotmillionreads,dim(Count_Matrix)) >= 1) >= nscut
- lo = colSums(Count_Matrix[!gt1rpin3,])
- workCM = Count_Matrix[gt1rpin3,]
- cleanrs = rowSums(workCM)
- cleanN = length(cleanrs)
- meth = paste( "After removing",length(lo),"contigs with fewer than ",nscut," sample read counts >= 1 per million, there are",sep="")
- print(paste("Read",allN,"contigs. Removed",zN,"contigs with no reads.",meth,cleanN,"contigs"),quote=F)
- maint = paste('Filter >=1/million reads in >=',nscut,'samples')
- } else {
- useme = (nzrs > quantile(nzrs,filterquantile))
- workCM = nonzerod[useme,]
- lo = colSums(nonzerod[!useme,])
- cleanrs = rowSums(workCM)
- cleanN = length(cleanrs)
- meth = paste("After filtering at count quantile =",filterquantile,", there are",sep="")
- print(paste('Read',allN,"contigs. Removed",zN,"with no reads.",meth,cleanN,"contigs"),quote=F)
- maint = paste('Filter below',filterquantile,'quantile')
- }
- cumPlot(rawrs=rawrs,cleanrs=cleanrs,maint=maint,myTitle=myTitle)
- allgenes = rownames(workCM)
- reg = "^chr([0-9]+):([0-9]+)-([0-9]+)"
- genecards=" 0.8) # is ucsc style string
- {
- print("@@ using ucsc substitution for urls")
- contigurls = paste0(ucsc,"&position=chr",testreg[,2],":",testreg[,3],"-",testreg[,4],"\'>",allgenes," ")
- } else {
- print("@@ using genecards substitution for urls")
- contigurls = paste0(genecards,allgenes,"\'>",allgenes,"")
- }
- print(paste("# Total low count contigs per sample = ",paste(lo,collapse=',')),quote=F)
- cmrowsums = rowSums(workCM)
- TName=unique(group)[1]
- CName=unique(group)[2]
- if (is.null(mydesign)) {
- if (length(subjects) == 0)
- {
- mydesign = model.matrix(~group)
- }
- else {
- subjf = factor(subjects)
- mydesign = model.matrix(~subjf+group) # we block on subject so make group last to simplify finding it
- }
- }
- print.noquote(paste('Using samples:',paste(colnames(workCM),collapse=',')))
- print.noquote('Using design matrix:')
- print.noquote(mydesign)
- if (doedgeR) {
- sink('edgeR.log')
- #### Setup DGEList object
- DGEList = DGEList(counts=workCM, group = group)
- DGEList = calcNormFactors(DGEList)
-
- DGEList = estimateGLMCommonDisp(DGEList,mydesign)
- comdisp = DGEList\$common.dispersion
- DGEList = estimateGLMTrendedDisp(DGEList,mydesign)
- if (edgeR_priordf > 0) {
- print.noquote(paste("prior.df =",edgeR_priordf))
- DGEList = estimateGLMTagwiseDisp(DGEList,mydesign,prior.df = edgeR_priordf)
- } else {
- DGEList = estimateGLMTagwiseDisp(DGEList,mydesign)
- }
- DGLM = glmFit(DGEList,design=mydesign)
- DE = glmLRT(DGLM,coef=ncol(DGLM\$design)) # always last one - subject is first if needed
- efflib = DGEList\$samples\$lib.size*DGEList\$samples\$norm.factors
- normData = (1e+06*DGEList\$counts/efflib)
- uoutput = cbind(
- Name=as.character(rownames(DGEList\$counts)),
- DE\$table,
- adj.p.value=p.adjust(DE\$table\$PValue, method=fdrtype),
- Dispersion=DGEList\$tagwise.dispersion,totreads=cmrowsums,normData,
- DGEList\$counts
- )
- soutput = uoutput[order(DE\$table\$PValue),] # sorted into p value order - for quick toptable
- goodness = gof(DGLM, pcutoff=fdrthresh)
- if (sum(goodness\$outlier) > 0) {
- print.noquote('GLM outliers:')
- print(paste(rownames(DGLM)[(goodness\$outlier)],collapse=','),quote=F)
- } else {
- print('No GLM fit outlier genes found\n')
- }
- z = limma::zscoreGamma(goodness\$gof.statistic, shape=goodness\$df/2, scale=2)
- pdf("edgeR_GoodnessofFit.pdf")
- qq = qqnorm(z, panel.first=grid(), main="tagwise dispersion")
- abline(0,1,lwd=3)
- points(qq\$x[goodness\$outlier],qq\$y[goodness\$outlier], pch=16, col="maroon")
- dev.off()
- estpriorn = getPriorN(DGEList)
- print(paste("Common Dispersion =",comdisp,"CV = ",sqrt(comdisp),"getPriorN = ",estpriorn),quote=F)
- efflib = DGEList\$samples\$lib.size*DGEList\$samples\$norm.factors
- normData = (1e+06*DGEList\$counts/efflib)
- uniqueg = unique(group)
- #### Plot MDS
- sample_colors = match(group,levels(group))
- sampleTypes = levels(factor(group))
- print.noquote(sampleTypes)
- pdf("edgeR_MDSplot.pdf")
- plotMDS.DGEList(DGEList,main=paste("edgeR MDS for",myTitle),cex=0.5,col=sample_colors,pch=sample_colors)
- legend(x="topleft", legend = sampleTypes,col=c(1:length(sampleTypes)), pch=19)
- grid(col="blue")
- dev.off()
- colnames(normData) = paste( colnames(normData),'N',sep="_")
- print(paste('Raw sample read totals',paste(colSums(nonzerod,na.rm=T),collapse=',')))
- nzd = data.frame(log(nonzerod + 1e-2,10))
- try( boxPlot(rawrs=nzd,cleanrs=log(normData,10),maint='TMM Normalisation',myTitle=myTitle,pdfname="edgeR_raw_norm_counts_box.pdf") )
- write.table(soutput,file=out_edgeR, quote=FALSE, sep="\t",row.names=F)
- tt = cbind(
- Name=as.character(rownames(DGEList\$counts)),
- DE\$table,
- adj.p.value=p.adjust(DE\$table\$PValue, method=fdrtype),
- Dispersion=DGEList\$tagwise.dispersion,totreads=cmrowsums
- )
- print.noquote("# edgeR Top tags\n")
- tt = cbind(tt,URL=contigurls) # add to end so table isn't laid out strangely
- tt = tt[order(DE\$table\$PValue),]
- print.noquote(tt[1:50,])
- deTags = rownames(uoutput[uoutput\$adj.p.value < fdrthresh,])
- nsig = length(deTags)
- print(paste('#',nsig,'tags significant at adj p=',fdrthresh),quote=F)
- deColours = ifelse(deTags,'red','black')
- pdf("edgeR_BCV_vs_abundance.pdf")
- plotBCV(DGEList, cex=0.3, main="Biological CV vs abundance")
- dev.off()
- dg = DGEList[order(DE\$table\$PValue),]
- #normData = (1e+06 * dg\$counts/expandAsMatrix(dg\$samples\$lib.size, dim(dg)))
- efflib = dg\$samples\$lib.size*dg\$samples\$norm.factors
- normData = (1e+06*dg\$counts/efflib)
- outpdfname="edgeR_top_100_heatmap.pdf"
- hmap2(normData,nsamp=100,TName=TName,group=group,outpdfname=outpdfname,myTitle=paste('edgeR Heatmap',myTitle))
- outSmear = "edgeR_smearplot.pdf"
- outMain = paste("Smear Plot for ",TName,' Vs ',CName,' (FDR@',fdrthresh,' N = ',nsig,')',sep='')
- smearPlot(DGEList=DGEList,deTags=deTags, outSmear=outSmear, outMain = outMain)
- qqPlot(descr=paste(myTitle,'edgeR adj p QQ plot'),pvector=tt\$adj.p.value,outpdf='edgeR_qqplot.pdf')
- norm.factor = DGEList\$samples\$norm.factors
- topresults.edgeR = soutput[which(soutput\$adj.p.value < fdrthresh), ]
- edgeRcountsindex = which(allgenes %in% rownames(topresults.edgeR))
- edgeRcounts = rep(0, length(allgenes))
- edgeRcounts[edgeRcountsindex] = 1 # Create venn diagram of hits
- sink()
- } ### doedgeR
- if (doDESeq2 == T)
- {
- sink("DESeq2.log")
- # DESeq2
- require('DESeq2')
- library('RColorBrewer')
- if (length(subjects) == 0)
- {
- pdata = data.frame(Name=colnames(workCM),Rx=group,row.names=colnames(workCM))
- deSEQds = DESeqDataSetFromMatrix(countData = workCM, colData = pdata, design = formula(~ Rx))
- } else {
- pdata = data.frame(Name=colnames(workCM),Rx=group,subjects=subjects,row.names=colnames(workCM))
- deSEQds = DESeqDataSetFromMatrix(countData = workCM, colData = pdata, design = formula(~ subjects + Rx))
- }
- #DESeq2 = DESeq(deSEQds,fitType='local',pAdjustMethod=fdrtype)
- #rDESeq = results(DESeq2)
- #newCountDataSet(workCM, group)
- deSeqDatsizefac = estimateSizeFactors(deSEQds)
- deSeqDatdisp = estimateDispersions(deSeqDatsizefac,fitType=DESeq_fitType)
- resDESeq = nbinomWaldTest(deSeqDatdisp, pAdjustMethod=fdrtype)
- rDESeq = as.data.frame(results(resDESeq))
- rDESeq = cbind(Contig=rownames(workCM),rDESeq,NReads=cmrowsums)
- srDESeq = rDESeq[order(rDESeq\$pvalue),]
- write.table(srDESeq,file=out_DESeq2, quote=FALSE, sep="\t",row.names=F)
- qqPlot(descr=paste(myTitle,'DESeq2 adj p qq plot'),pvector=rDESeq\$padj,outpdf='DESeq2_qqplot.pdf')
- cat("# DESeq top 50\n")
- rDESeq = cbind(Contig=rownames(workCM),rDESeq,NReads=cmrowsums,URL=contigurls)
- srDESeq = rDESeq[order(rDESeq\$pvalue),]
- print.noquote(srDESeq[1:50,])
- topresults.DESeq = rDESeq[which(rDESeq\$padj < fdrthresh), ]
- DESeqcountsindex = which(allgenes %in% rownames(topresults.DESeq))
- DESeqcounts = rep(0, length(allgenes))
- DESeqcounts[DESeqcountsindex] = 1
- pdf("DESeq2_dispersion_estimates.pdf")
- plotDispEsts(resDESeq)
- dev.off()
- ysmall = abs(min(rDESeq\$log2FoldChange))
- ybig = abs(max(rDESeq\$log2FoldChange))
- ylimit = min(4,ysmall,ybig)
- pdf("DESeq2_MA_plot.pdf")
- plotMA(resDESeq,main=paste(myTitle,"DESeq2 MA plot"),ylim=c(-ylimit,ylimit))
- dev.off()
- rlogres = rlogTransformation(resDESeq)
- sampledists = dist( t( assay(rlogres) ) )
- sdmat = as.matrix(sampledists)
- pdf("DESeq2_sample_distance_plot.pdf")
- heatmap.2(sdmat,trace="none",main=paste(myTitle,"DESeq2 sample distances"),
- col = colorRampPalette( rev(brewer.pal(9, "RdBu")) )(255))
- dev.off()
- ###outpdfname="DESeq2_top50_heatmap.pdf"
- ###hmap2(sresDESeq,nsamp=50,TName=TName,group=group,outpdfname=outpdfname,myTitle=paste('DESeq2 vst rlog Heatmap',myTitle))
- sink()
- result = try( (ppca = plotPCA( varianceStabilizingTransformation(deSeqDatdisp,blind=T), intgroup=c("Rx","Name")) ) )
- if ("try-error" %in% class(result)) {
- print.noquote('DESeq2 plotPCA failed.')
- } else {
- pdf("DESeq2_PCA_plot.pdf")
- #### wtf - print? Seems needed to get this to work
- print(ppca)
- dev.off()
- }
- }
-
- if (doVoom == T) {
- sink('Voom.log')
- if (doedgeR == F) {
- #### Setup DGEList object
- DGEList = DGEList(counts=workCM, group = group)
- DGEList = calcNormFactors(DGEList)
- DGEList = estimateGLMCommonDisp(DGEList,mydesign)
- DGEList = estimateGLMTrendedDisp(DGEList,mydesign)
- DGEList = estimateGLMTagwiseDisp(DGEList,mydesign)
- DGEList = estimateGLMTagwiseDisp(DGEList,mydesign)
- norm.factor = DGEList\$samples\$norm.factors
- }
- pdf("Voom_mean_variance_plot.pdf")
- dat.voomed = voom(DGEList, mydesign, plot = TRUE, lib.size = colSums(workCM) * norm.factor)
- dev.off()
- # Use limma to fit data
- fit = lmFit(dat.voomed, mydesign)
- fit = eBayes(fit)
- rvoom = topTable(fit, coef = length(colnames(mydesign)), adj = fdrtype, n = Inf, sort="none")
- qqPlot(descr=paste(myTitle,'Voom-limma adj p QQ plot'),pvector=rvoom\$adj.P.Val,outpdf='Voom_qqplot.pdf')
- rownames(rvoom) = rownames(workCM)
- rvoom = cbind(rvoom,NReads=cmrowsums)
- srvoom = rvoom[order(rvoom\$P.Value),]
- write.table(srvoom,file=out_VOOM, quote=FALSE, sep="\t",row.names=F)
- rvoom = cbind(rvoom,NReads=cmrowsums,URL=contigurls)
- srvoom = rvoom[order(rvoom\$P.Value),]
- cat("# Voom top 50\n")
- print(srvoom[1:50,])
- # Use an FDR cutoff to find interesting samples for edgeR, DESeq and voom/limma
- topresults.voom = rvoom[which(rvoom\$adj.P.Val < fdrthresh), ]
- voomcountsindex = which(allgenes %in% topresults.voom\$ID)
- voomcounts = rep(0, length(allgenes))
- voomcounts[voomcountsindex] = 1
- sink()
- }
-
- if (doCamera) {
- doGSEA(y=DGEList,design=mydesign,histgmt=histgmt,bigmt=bigmt,ntest=20,myTitle=myTitle,
- outfname=paste(mt,"GSEA.xls",sep="_"),fdrthresh=fdrthresh,fdrtype=fdrtype)
- }
-
- if ((doDESeq2==T) || (doVoom==T) || (doedgeR==T)) {
- if ((doVoom==T) && (doDESeq2==T) && (doedgeR==T)) {
- vennmain = paste(mt,'Voom,edgeR and DESeq2 overlap at FDR=',fdrthresh)
- counts.dataframe = data.frame(edgeR = edgeRcounts, DESeq2 = DESeqcounts,
- VOOM_limma = voomcounts, row.names = allgenes)
- } else if ((doDESeq2==T) && (doedgeR==T)) {
- vennmain = paste(mt,'DESeq2 and edgeR overlap at FDR=',fdrthresh)
- counts.dataframe = data.frame(edgeR = edgeRcounts, DESeq2 = DESeqcounts, row.names = allgenes)
- } else if ((doVoom==T) && (doedgeR==T)) {
- vennmain = paste(mt,'Voom and edgeR overlap at FDR=',fdrthresh)
- counts.dataframe = data.frame(edgeR = edgeRcounts, VOOM_limma = voomcounts, row.names = allgenes)
- }
-
- if (nrow(counts.dataframe > 1)) {
- counts.venn = vennCounts(counts.dataframe)
- vennf = "Venn_significant_genes_overlap.pdf"
- pdf(vennf)
- vennDiagram(counts.venn,main=vennmain,col="maroon")
- dev.off()
- }
- } #### doDESeq2 or doVoom
-
-}
-#### Done
-
-###sink(stdout(),append=T,type="message")
-builtin_gmt = ""
-history_gmt = ""
-history_gmt_name = ""
-out_edgeR = F
-out_DESeq2 = F
-out_VOOM = "$out_VOOM"
-doDESeq2 = $DESeq2.doDESeq2 # make these T or F
-doVoom = $doVoom
-doCamera = F
-doedgeR = $edgeR.doedgeR
-edgeR_priordf = 0
-
-
-#if $doVoom == "T":
- out_VOOM = "$out_VOOM"
-#end if
-
-#if $DESeq2.doDESeq2 == "T":
- out_DESeq2 = "$out_DESeq2"
- DESeq_fitType = "$DESeq2.DESeq_fitType"
-#end if
-
-#if $edgeR.doedgeR == "T":
- out_edgeR = "$out_edgeR"
- edgeR_priordf = $edgeR.edgeR_priordf
-#end if
-
-
-if (sum(c(doedgeR,doVoom,doDESeq2)) == 0)
-{
-write("No methods chosen - nothing to do! Please try again after choosing one or more methods", stderr())
-quit(save="no",status=2)
-}
-
-Out_Dir = "$html_file.files_path"
-Input = "$input1"
-TreatmentName = "$treatment_name"
-TreatmentCols = "$Treat_cols"
-ControlName = "$control_name"
-ControlCols= "$Control_cols"
-org = "$input1.dbkey"
-if (org == "") { org = "hg19"}
-fdrtype = "$fdrtype"
-fdrthresh = $fdrthresh
-useNDF = $useNDF
-fQ = $fQ # non-differential centile cutoff
-myTitle = "$title"
-sids = strsplit("$subjectids",',')
-subjects = unlist(sids)
-nsubj = length(subjects)
-TCols = as.numeric(strsplit(TreatmentCols,",")[[1]])-1
-CCols = as.numeric(strsplit(ControlCols,",")[[1]])-1
-cat('Got TCols=')
-cat(TCols)
-cat('; CCols=')
-cat(CCols)
-cat('\n')
-useCols = c(TCols,CCols)
-if (file.exists(Out_Dir) == F) dir.create(Out_Dir)
-Count_Matrix = read.table(Input,header=T,row.names=1,sep='\t') #Load tab file assume header
-snames = colnames(Count_Matrix)
-nsamples = length(snames)
-if (nsubj > 0 & nsubj != nsamples) {
-options("show.error.messages"=T)
-mess = paste('Fatal error: Supplied subject id list',paste(subjects,collapse=','),
- 'has length',nsubj,'but there are',nsamples,'samples',paste(snames,collapse=','))
-write(mess, stderr())
-quit(save="no",status=4)
-}
-if (length(subjects) != 0) {subjects = subjects[useCols]}
-Count_Matrix = Count_Matrix[,useCols] ### reorder columns
-rn = rownames(Count_Matrix)
-islib = rn %in% c('librarySize','NotInBedRegions')
-LibSizes = Count_Matrix[subset(rn,islib),][1] # take first
-Count_Matrix = Count_Matrix[subset(rn,! islib),]
-group = c(rep(TreatmentName,length(TCols)), rep(ControlName,length(CCols)) ) #Build a group descriptor
-group = factor(group, levels=c(ControlName,TreatmentName))
-colnames(Count_Matrix) = paste(group,colnames(Count_Matrix),sep="_") #Relable columns
-results = edgeIt(Count_Matrix=Count_Matrix,group=group, out_edgeR=out_edgeR, out_VOOM=out_VOOM, out_DESeq2=out_DESeq2,
- fdrtype='BH',mydesign=NULL,priordf=edgeR_priordf,fdrthresh=fdrthresh,outputdir='.',
- myTitle=myTitle,useNDF=F,libSize=c(),filterquantile=fQ,subjects=subjects,
- doDESeq2=doDESeq2,doVoom=doVoom,doCamera=doCamera,doedgeR=doedgeR,org=org,
- histgmt=history_gmt,bigmt=builtin_gmt,DESeq_fitType=DESeq_fitType)
-sessionInfo()
-]]>
-
-
-
-
-**What it does**
-
-Allows short read sequence counts from controlled experiments to be analysed for differentially expressed genes.
-Optionally adds a term for subject if not all samples are independent or if some other factor needs to be blocked in the design.
-
-**Input**
-
-Requires a count matrix as a tabular file. These are best made using the companion HTSeq_ based counter Galaxy wrapper
-and your fave gene model to generate inputs. Each row is a genomic feature (gene or exon eg) and each column the
-non-negative integer count of reads from one sample overlapping the feature.
-The matrix must have a header row uniquely identifying the source samples, and unique row names in
-the first column. Typically the row names are gene symbols or probe ids for downstream use in GSEA and other methods.
-
-**Specifying comparisons**
-
-This is basically dumbed down for two factors - case vs control.
-
-More complex interfaces are possible but painful at present.
-Probably need to specify a phenotype file to do this better.
-Work in progress. Send code.
-
-If you have (eg) paired samples and wish to include a term in the GLM to account for some other factor (subject in the case of paired samples),
-put a comma separated list of indicators for every sample (whether modelled or not!) indicating (eg) the subject number or
-A list of integers, one for each subject or an empty string if samples are all independent.
-If not empty, there must be exactly as many integers in the supplied integer list as there are columns (samples) in the count matrix.
-Integers for samples that are not in the analysis *must* be present in the string as filler even if not used.
-
-So if you have 2 pairs out of 6 samples, you need to put in unique integers for the unpaired ones
-eg if you had 6 samples with the first two independent but the second and third pairs each being from independent subjects. you might use
-8,9,1,1,2,2
-as subject IDs to indicate two paired samples from the same subject in columns 3/4 and 5/6
-
-**Methods available**
-
-You can run 3 popular Bioconductor packages available for count data.
-
-edgeR - see edgeR_ for details
-
-VOOM/limma - see limma_VOOM_ for details
-
-DESeq2 - see DESeq2_ for details
-
-and optionally camera in edgeR which works better if MSigDB is installed.
-
-**Outputs**
-
-Some helpful plots and analysis results. Note that most of these are produced using R code
-suggested by the excellent documentation and vignettes for the Bioconductor
-packages invoked. The Tool Factory is used to automatically lay these out for you to enjoy.
-
-**Note on Voom**
-
-The voom from limma version 3.16.6 help in R includes this from the authors - but you should read the paper to interpret this method.
-
-This function is intended to process RNA-Seq or ChIP-Seq data prior to linear modelling in limma.
-
-voom is an acronym for mean-variance modelling at the observational level.
-The key concern is to estimate the mean-variance relationship in the data, then use this to compute appropriate weights for each observation.
-Count data almost show non-trivial mean-variance relationships. Raw counts show increasing variance with increasing count size, while log-counts typically show a decreasing mean-variance trend.
-This function estimates the mean-variance trend for log-counts, then assigns a weight to each observation based on its predicted variance.
-The weights are then used in the linear modelling process to adjust for heteroscedasticity.
-
-In an experiment, a count value is observed for each tag in each sample. A tag-wise mean-variance trend is computed using lowess.
-The tag-wise mean is the mean log2 count with an offset of 0.5, across samples for a given tag.
-The tag-wise variance is the quarter-root-variance of normalized log2 counts per million values with an offset of 0.5, across samples for a given tag.
-Tags with zero counts across all samples are not included in the lowess fit. Optional normalization is performed using normalizeBetweenArrays.
-Using fitted values of log2 counts from a linear model fit by lmFit, variances from the mean-variance trend were interpolated for each observation.
-This was carried out by approxfun. Inverse variance weights can be used to correct for mean-variance trend in the count data.
-
-
-Author(s)
-
-Charity Law and Gordon Smyth
-
-References
-
-Law, CW (2013). Precision weights for gene expression analysis. PhD Thesis. University of Melbourne, Australia.
-
-Law, CW, Chen, Y, Shi, W, Smyth, GK (2013). Voom! Precision weights unlock linear model analysis tools for RNA-seq read counts.
-Technical Report 1 May 2013, Bioinformatics Division, Walter and Eliza Hall Institute of Medical Reseach, Melbourne, Australia.
-http://www.statsci.org/smyth/pubs/VoomPreprint.pdf
-
-See Also
-
-A voom case study is given in the edgeR User's Guide.
-
-vooma is a similar function but for microarrays instead of RNA-seq.
-
-
-***old rant on changes to Bioconductor package variable names between versions***
-
-The edgeR authors made a small cosmetic change in the name of one important variable (from p.value to PValue)
-breaking this and all other code that assumed the old name for this variable,
-between edgeR2.4.4 and 2.4.6 (the version for R 2.14 as at the time of writing).
-This means that all code using edgeR is sensitive to the version. I think this was a very unwise thing
-to do because it wasted hours of my time to track down and will similarly cost other edgeR users dearly
-when their old scripts break. This tool currently now works with 2.4.6.
-
-**Note on prior.N**
-
-http://seqanswers.com/forums/showthread.php?t=5591 says:
-
-*prior.n*
-
-The value for prior.n determines the amount of smoothing of tagwise dispersions towards the common dispersion.
-You can think of it as like a "weight" for the common value. (It is actually the weight for the common likelihood
-in the weighted likelihood equation). The larger the value for prior.n, the more smoothing, i.e. the closer your
-tagwise dispersion estimates will be to the common dispersion. If you use a prior.n of 1, then that gives the
-common likelihood the weight of one observation.
-
-In answer to your question, it is a good thing to squeeze the tagwise dispersions towards a common value,
-or else you will be using very unreliable estimates of the dispersion. I would not recommend using the value that
-you obtained from estimateSmoothing()---this is far too small and would result in virtually no moderation
-(squeezing) of the tagwise dispersions. How many samples do you have in your experiment?
-What is the experimental design? If you have few samples (less than 6) then I would suggest a prior.n of at least 10.
-If you have more samples, then the tagwise dispersion estimates will be more reliable,
-so you could consider using a smaller prior.n, although I would hesitate to use a prior.n less than 5.
-
-
-From Bioconductor Digest, Vol 118, Issue 5, Gordon writes:
-
-Dear Dorota,
-
-The important settings are prior.df and trend.
-
-prior.n and prior.df are related through prior.df = prior.n * residual.df,
-and your experiment has residual.df = 36 - 12 = 24. So the old setting of
-prior.n=10 is equivalent for your data to prior.df = 240, a very large
-value. Going the other way, the new setting of prior.df=10 is equivalent
-to prior.n=10/24.
-
-To recover old results with the current software you would use
-
- estimateTagwiseDisp(object, prior.df=240, trend="none")
-
-To get the new default from old software you would use
-
- estimateTagwiseDisp(object, prior.n=10/24, trend=TRUE)
-
-Actually the old trend method is equivalent to trend="loess" in the new
-software. You should use plotBCV(object) to see whether a trend is
-required.
-
-Note you could also use
-
- prior.n = getPriorN(object, prior.df=10)
-
-to map between prior.df and prior.n.
-
-----
-
-**Attributions**
-
-edgeR - edgeR_
-
-VOOM/limma - limma_VOOM_
-
-DESeq2 - DESeq2_ for details
-
-See above for Bioconductor package documentation for packages exposed in Galaxy by this tool and app store package.
-
-Galaxy_ (that's what you are using right now!) for gluing everything together
-
-Otherwise, all code and documentation comprising this tool was written by Ross Lazarus and is
-licensed to you under the LGPL_ like other rgenetics artefacts
-
-.. _LGPL: http://www.gnu.org/copyleft/lesser.html
-.. _HTSeq: http://www-huber.embl.de/users/anders/HTSeq/doc/index.html
-.. _edgeR: http://www.bioconductor.org/packages/release/bioc/html/edgeR.html
-.. _DESeq2: http://www.bioconductor.org/packages/release/bioc/html/DESeq2.html
-.. _limma_VOOM: http://www.bioconductor.org/packages/release/bioc/html/limma.html
-.. _Galaxy: http://getgalaxy.org
-
-
-
-
-
diff -r 5b6af671d985 -r 8051d14cf819 differential_count_models/test-data/edgeRtest1out.html
--- a/differential_count_models/test-data/edgeRtest1out.html Thu Aug 08 20:04:16 2013 -0400
+++ /dev/null Thu Jan 01 00:00:00 1970 +0000
@@ -1,733 +0,0 @@
-
-
-
-
-
Galaxy Tool "DifferentialCounts" run at 07/08/2013 15:46:55
-
DESeq2 images and outputs
-(Click on a thumbnail image to download the corresponding original PDF image)
-
-
-
-
-
-
-
-
DESeq2 log output
-
-
-
-# DESeq top 50
-
- Contig baseMean log2FoldChange lfcSE pvalue padj NReads URL
-
-Mir192 Mir192 271352.97636 6.965264 0.2150593 4.096936e-230 4.576278e-227 2325567 Mir192
-
-Mir122a Mir122a 10112.31117 10.312083 0.3292695 2.649323e-215 1.479647e-212 90428 Mir122a
-
-Mir149 Mir149 810.35429 -6.911118 0.2341392 1.735537e-191 6.461982e-189 6164 Mir149
-
-Mir23a Mir23a 1289.18043 -3.104086 0.1191688 1.424246e-149 3.977206e-147 10118 Mir23a
-
-Mir181d Mir181d 275.22797 -3.581172 0.1778187 3.329371e-90 7.437816e-88 2139 Mir181d
-
-Mir204 Mir204 347.57397 -7.284200 0.3771119 3.959336e-83 7.370965e-81 2601 Mir204
-
-Mir23b Mir23b 2028.55377 -2.065110 0.1085802 1.182361e-80 1.886711e-78 16387 Mir23b
-
-Mir27a Mir27a 2788.72629 -3.016676 0.1688167 2.036708e-71 2.843754e-69 21886 Mir27a
-
-Mir195 Mir195 519.86200 -3.152795 0.1784796 7.838123e-70 9.727982e-68 3962 Mir195
-
-Mir194-2 Mir194-2 391.65678 5.222911 0.3099275 1.013490e-63 1.132068e-61 3570 Mir194-2
-
-Mir208b Mir208b 1649.77924 -11.396172 0.6771238 1.464479e-63 1.487112e-61 14756 Mir208b
-
-Mir10b Mir10b 27820.40551 -5.071453 0.3044889 2.754493e-62 2.563974e-60 197340 Mir10b
-
-Mir181c Mir181c 2765.96510 -3.660964 0.2275711 3.141153e-58 2.698975e-56 23605 Mir181c
-
-Mir208a Mir208a 616.76981 -10.356524 0.6559217 3.688385e-56 2.942804e-54 4638 Mir208a
-
-Mir490 Mir490 220.99790 -8.059660 0.5142876 2.369067e-55 1.764165e-53 1741 Mir490
-
-Mir203 Mir203 772.92882 1.990849 0.1274099 4.877239e-55 3.404923e-53 6739 Mir203
-
-Mir215 Mir215 152.78082 -3.004380 0.1939090 3.822339e-54 2.511502e-52 1182 Mir215
-
-Dnm3os Dnm3os 179.61643 -3.278392 0.2166491 9.922020e-52 6.157165e-50 1401 Dnm3os
-
-Mir214 Mir214 134.69038 -3.216444 0.2154916 2.230148e-50 1.311093e-48 1048 Mir214
-
-Mir21 Mir21 26121.31011 2.963903 0.2008617 2.817434e-49 1.573537e-47 229120 Mir21
-
-Mir1948 Mir1948 263.89527 7.074045 0.4867225 7.374030e-48 3.922282e-46 2404 Mir1948
-
-Mir27b Mir27b 76478.05753 -1.904653 0.1312889 1.088626e-47 5.527251e-46 625308 Mir27b
-
-Rabggtb Rabggtb 2257.19195 1.988368 0.1401741 1.134862e-45 5.511484e-44 19535 Rabggtb
-
-Mir499 Mir499 712.45950 -10.577061 0.7528467 7.766408e-45 3.614616e-43 6527 Mir499
-
-Mir101b Mir101b 6846.19683 3.791681 0.2809666 1.670548e-41 7.464007e-40 59019 Mir101b
-
-Mir132 Mir132 106.46062 -2.797928 0.2083376 4.046163e-41 1.738294e-39 857 Mir132
-
-Mir143hg Mir143hg 180217.77425 -2.169143 0.1685614 6.764675e-38 2.798571e-36 1407364 Mir143hg
-
-Mir143 Mir143 179219.35960 -2.170303 0.1696199 1.746403e-37 6.966899e-36 1399819 Mir143
-
-Mir155 Mir155 57.66182 -3.788079 0.3056585 2.845488e-35 1.096004e-33 463 Mir155
-
-Mir322 Mir322 899.53469 -3.126011 0.2622595 9.363374e-33 3.486296e-31 7074 Mir322
-
-Mir378 Mir378 483.21548 -2.994300 0.2577321 3.343457e-31 1.204723e-29 4075 Mir378
-
-Mir24-2 Mir24-2 424.48288 -2.712674 0.2361028 1.491830e-30 5.049617e-29 3470 Mir24-2
-
-Mir3074-2 Mir3074-2 424.48288 -2.712674 0.2361028 1.491830e-30 5.049617e-29 3470 Mir3074-2
-
-Mir199b Mir199b 47.84725 -5.294373 0.4644474 4.215162e-30 1.384805e-28 370 Mir199b
-
-Mir802 Mir802 166.83414 8.816580 0.7782636 9.478527e-30 3.025004e-28 1514 Mir802
-
-Mir125b-2 Mir125b-2 493.08516 -2.919341 0.2631193 1.324797e-28 4.110551e-27 3837 Mir125b-2
-
-Mir301 Mir301 260.53406 -1.676984 0.1526772 4.570133e-28 1.379686e-26 2119 Mir301
-
-Snord104 Snord104 3851.90119 2.386573 0.2173857 4.847914e-28 1.425032e-26 33458 Snord104
-
-Mir150 Mir150 553.20599 -2.836881 0.2595088 8.127991e-28 2.327940e-26 4229 Mir150
-
-Mir148a Mir148a 118994.46955 2.678852 0.2481801 3.675045e-27 1.026256e-25 1002397 Mir148a
-
-5430416N02Rik 5430416N02Rik 62.15966 3.089960 0.2941123 8.101331e-26 2.207119e-24 564 5430416N02Rik
-
-Mir193 Mir193 45.70861 4.991530 0.4814098 3.446492e-25 9.166027e-24 421 Mir193
-
-Mir3073 Mir3073 98.93199 8.208709 0.7944742 5.036320e-25 1.308272e-23 904 Mir3073
-
-Mir125b-1 Mir125b-1 79.01988 -3.020660 0.2937360 8.355633e-25 2.121191e-23 609 Mir125b-1
-
-2610203C20Rik 2610203C20Rik 79.17666 -3.023491 0.2948614 1.136165e-24 2.820214e-23 610 2610203C20Rik
-
-Mir181a-1 Mir181a-1 59.53826 -3.151487 0.3211628 9.923707e-23 2.409735e-21 506 Mir181a-1
-
-Mir184 Mir184 32.23796 -4.865023 0.4962776 1.092606e-22 2.596683e-21 247 Mir184
-
-Mir199a-2 Mir199a-2 44.84878 -3.422216 0.3545647 4.826269e-22 1.123113e-20 352 Mir199a-2
-
-Snord91a Snord91a 168.95251 2.700421 0.2835464 1.670595e-21 3.808275e-20 1437 Snord91a
-
-Mir200b Mir200b 87.13638 5.940702 0.6338554 7.094881e-21 1.584996e-19 888 Mir200b
-
-
-
-
-
DifferentialCounts log output
-
-
-
-Loading required package: gtools
-
-Loading required package: gdata
-
-gdata: read.xls support for 'XLS' (Excel 97-2004) files ENABLED.
-
-gdata: read.xls support for 'XLSX' (Excel 2007+) files ENABLED.
-
-Attaching package: ‘gdata’
-
-The following object is masked from ‘package:stats’:
-
- nobs
-
-The following object is masked from ‘package:utils’:
-
- object.size
-
-Loading required package: caTools
-
-Loading required package: grid
-
-Loading required package: KernSmooth
-
-KernSmooth 2.23 loaded
-
-Copyright M. P. Wand 1997-2009
-
-Loading required package: MASS
-
-Attaching package: ‘gplots’
-
-The following object is masked from ‘package:stats’:
-
- lowess
-
-Loading required package: methods
-
-Loading required package: limma
-
-Loading required package: splines
-
-Loading required package: DESeq2
-
-Loading required package: GenomicRanges
-
-Loading required package: BiocGenerics
-
-Loading required package: parallel
-
-Attaching package: ‘BiocGenerics’
-
-The following object is masked from ‘package:parallel’:
-
- clusterApply, clusterApplyLB, clusterCall, clusterEvalQ, clusterExport, clusterMap, parApply, parCapply, parLapply, parLapplyLB, parRapply, parSapply, parSapplyLB
-
-The following object is masked from ‘package:gdata’:
-
- combine
-
-The following object is masked from ‘package:stats’:
-
- xtabs
-
-The following object is masked from ‘package:base’:
-
- anyDuplicated, as.data.frame, cbind, colnames, duplicated, eval, Filter, Find, get, intersect, lapply, Map, mapply, match, mget, order, paste, pmax, pmax.int, pmin, pmin.int, Position, rank, rbind, Reduce, rep.int, rownames, sapply, setdiff, sort, table, tapply, union, unique, unlist
-
-Loading required package: IRanges
-
-Attaching package: ‘IRanges’
-
-The following object is masked from ‘package:gplots’:
-
- space
-
-The following object is masked from ‘package:caTools’:
-
- runmean
-
-The following object is masked from ‘package:gdata’:
-
- trim
-
-Loading required package: Biobase
-
-Welcome to Bioconductor
-
- Vignettes contain introductory material; view with 'browseVignettes()'. To cite Bioconductor, see 'citation("Biobase")', and for packages 'citation("pkgname")'.
-
-Loading required package: lattice
-
-Loading required package: Rcpp
-
-Loading required package: RcppArmadillo
-
-Attaching package: ‘DESeq2’
-
-The following object is masked from ‘package:limma’:
-
- plotMA
-
-gene-wise dispersion estimates
-
-mean-dispersion relationship
-
-final dispersion estimates
-
-you had estimated dispersions, replacing these
-
-gene-wise dispersion estimates
-
-mean-dispersion relationship
-
-final dispersion estimates
-
-you had estimated dispersions, replacing these
-
-gene-wise dispersion estimates
-
-mean-dispersion relationship
-
-final dispersion estimates
-
-Warning messages:
-
-1: In bplt(at[i], wid = width[i], stats = z$stats[, i], out = z$out[z$group == :
-
- Outlier (-Inf) in boxplot 1 is not drawn
-
-2: In bplt(at[i], wid = width[i], stats = z$stats[, i], out = z$out[z$group == :
-
- Outlier (-Inf) in boxplot 3 is not drawn
-
-3: In bxp(list(stats = c(-0.430723026286372, -0.127900608036896, 0.474159383291067, :
-
- some notches went outside hinges ('box'): maybe set notch=FALSE
-
-4: In par(defpar) : calling par(new=TRUE) with no plot
-
-
-
-
-
VOOM images and outputs
-(Click on a thumbnail image to download the corresponding original PDF image)
-
-
-
-
-
-
-
VOOM log output
-
-
-
-# VOOM top 50
-
- ID logFC AveExpr t P.Value adj.P.Val B NReads URL
-
-Mir192 Mir192 6.948883 14.6763803 42.722954 2.301199e-16 2.625668e-13 27.266471 2325567 Mir192
-
-Mir208a Mir208a -11.015018 3.9395538 -23.252407 1.118938e-12 6.383542e-10 17.208662 4638 Mir208a
-
-Mir122a Mir122a 10.426125 8.1698641 21.722912 2.859682e-12 1.087633e-09 17.760171 90428 Mir122a
-
-Mir149 Mir149 -7.030463 6.3160807 -20.883835 4.915491e-12 1.402144e-09 17.277609 6164 Mir149
-
-Mir208b Mir208b -12.433228 4.6076218 -19.592458 1.179199e-11 2.690931e-09 15.683666 14756 Mir208b
-
-Mir10b Mir10b -5.130915 12.2628672 -18.242023 3.124991e-11 4.963978e-09 16.221503 197340 Mir10b
-
-Mir143hg Mir143hg -2.249221 16.2444825 -18.082481 3.521739e-11 4.963978e-09 16.026695 1407364 Mir143hg
-
-Mir143 Mir143 -2.251067 16.2358599 -18.081481 3.524391e-11 4.963978e-09 16.026084 1399819 Mir143
-
-Mir499 Mir499 -11.567529 3.7874598 -17.942086 3.915496e-11 4.963978e-09 14.821741 6527 Mir499
-
-Mir802 Mir802 9.158434 2.9157675 17.316522 6.338616e-11 7.232360e-09 14.381577 1514 Mir802
-
-Mir3073 Mir3073 8.420542 2.5457189 16.702657 1.033066e-10 1.036045e-08 13.985845 904 Mir3073
-
-Mir148a Mir148a 2.638213 15.4435820 16.548188 1.171186e-10 1.036045e-08 14.814792 1002397 Mir148a
-
-Mir101b Mir101b 3.765722 10.8508440 16.538566 1.180419e-10 1.036045e-08 14.900027 59019 Mir101b
-
-Mir490 Mir490 -8.474378 3.7506957 -16.259650 1.484816e-10 1.210125e-08 13.424617 1741 Mir490
-
-Mir21 Mir21 2.938537 13.1642917 15.375404 3.148335e-10 2.394833e-08 13.867698 229120 Mir21
-
-Mir181c Mir181c -3.742560 9.6295577 -15.242361 3.537063e-10 2.522368e-08 13.810405 23605 Mir181c
-
-Mir204 Mir204 -7.684425 4.7751735 -15.033484 4.254268e-10 2.855364e-08 12.822427 2601 Mir204
-
-Mir23a Mir23a -3.165768 8.7896592 -14.631179 6.110682e-10 3.873493e-08 13.269174 10118 Mir23a
-
-Mir181d Mir181d -3.636211 6.3713218 -14.317073 8.157508e-10 4.898798e-08 12.956333 2139 Mir181d
-
-Mir133b Mir133b -6.493549 1.2544862 -13.969968 1.129934e-09 6.446275e-08 11.982684 159 Mir133b
-
-Mir27a Mir27a -3.106935 9.9255796 -13.838251 1.281011e-09 6.960160e-08 12.513086 21886 Mir27a
-
-Mir194-2 Mir194-2 5.264136 6.0897615 13.044012 2.792884e-09 1.448491e-07 11.715753 3570 Mir194-2
-
-Mir195 Mir195 -3.216595 7.4509350 -12.869478 3.332788e-09 1.653353e-07 11.587523 3962 Mir195
-
-Mir27b Mir27b -1.976376 15.0957731 -11.756036 1.082197e-08 5.144946e-07 10.127719 625308 Mir27b
-
-Mir378 Mir378 -3.097393 7.3832049 -11.684163 1.171371e-08 5.346138e-07 10.329692 4075 Mir378
-
-Snord104 Snord104 2.337374 10.6109024 11.495675 1.444482e-08 6.339052e-07 10.023395 33458 Snord104
-
-Mir1983 Mir1983 -5.895500 0.9931851 -11.445812 1.527548e-08 6.441605e-07 9.749260 101 Mir1983
-
-Mir322 Mir322 -3.296618 8.2153415 -11.415362 1.580762e-08 6.441605e-07 10.008472 7074 Mir322
-
-Mir200a Mir200a 6.191561 1.7981309 11.322172 1.756229e-08 6.909853e-07 9.662295 264 Mir200a
-
-Mir215 Mir215 -3.045873 5.7544234 -11.148134 2.141822e-08 8.082459e-07 9.753268 1182 Mir215
-
-Dnm3os Dnm3os -3.363344 5.8607432 -11.092261 2.283960e-08 8.082459e-07 9.689496 1401 Dnm3os
-
-Mir182 Mir182 4.903995 7.1511683 11.074468 2.331304e-08 8.082459e-07 9.658842 7189 Mir182
-
-Mir181a-2 Mir181a-2 -3.048298 6.9414651 -11.072128 2.337609e-08 8.082459e-07 9.644017 2817 Mir181a-2
-
-Mir1948 Mir1948 7.195525 4.5513493 11.005492 2.524936e-08 8.473388e-07 9.341794 2404 Mir1948
-
-Mir214 Mir214 -3.280874 5.4784451 -10.768257 3.332555e-08 1.086413e-06 9.318504 1048 Mir214
-
-Mir153 Mir153 -5.963803 1.4386315 -10.727082 3.498742e-08 1.093990e-06 9.035569 140 Mir153
-
-Cyp3a25 Cyp3a25 6.318200 1.4888933 10.698226 3.620443e-08 1.093990e-06 9.024973 226 Cyp3a25
-
-Gm5441 Gm5441 -5.982176 1.4484953 -10.692891 3.643436e-08 1.093990e-06 9.000362 142 Gm5441
-
-Mir125b-2 Mir125b-2 -3.077678 7.4316058 -10.446668 4.893073e-08 1.431538e-06 8.884250 3837 Mir125b-2
-
-Mir133a-1 Mir133a-1 -5.144671 0.5903264 -10.358205 5.447229e-08 1.553822e-06 8.575535 60 Mir133a-1
-
-1110038B12Rik 1110038B12Rik 2.226702 10.8487089 10.194609 6.655312e-08 1.852125e-06 8.439308 37066 1110038B12Rik
-
-Mir132 Mir132 -2.847559 5.3211839 -10.110952 7.380297e-08 2.004981e-06 8.531491 857 Mir132
-
-Rabggtb Rabggtb 1.935779 9.9874171 9.928995 9.262821e-08 2.457879e-06 8.133384 19535 Rabggtb
-
-Mir504 Mir504 -5.256127 0.6221088 -9.892894 9.693595e-08 2.513725e-06 8.068853 69 Mir504
-
-Mir150 Mir150 -2.938531 7.6297870 -9.842102 1.033602e-07 2.620755e-06 8.116464 4229 Mir150
-
-Mir199b Mir199b -5.752816 2.8805143 -9.823920 1.057683e-07 2.623514e-06 7.979387 370 Mir199b
-
-Mir23b Mir23b -2.124129 9.8141190 -9.806316 1.081569e-07 2.625681e-06 7.979464 16387 Mir23b
-
-Mir24-2 Mir24-2 -2.833979 7.3083691 -9.767192 1.136724e-07 2.646944e-06 8.030550 3470 Mir24-2
-
-Mir3074-2 Mir3074-2 -2.833979 7.3083691 -9.767192 1.136724e-07 2.646944e-06 8.030550 3470 Mir3074-2
-
-Mir155 Mir155 -3.906600 3.9899000 -9.732173 1.188627e-07 2.712448e-06 8.046518 463 Mir155
-
-
-
-
-
edgeR images and outputs
-(Click on a thumbnail image to download the corresponding original PDF image)
-
-
-
-
-
-
-
-
-
-
edgeR log output
-
-
-
-[1] prior.df = 8
-
-[1] "No GLM fit outlier genes found\n"
-
-[1] Common Dispersion = 0.228651460998105 CV = 0.478175136323613 getPriorN = 3.33333333333333
-
-[1] heart liver
-
-[1] "Raw sample read totals 2443751,1644652,1682104,1806045,1440960,1341813,2888924,1428365"
-
-[1] raw contig counts by sample:
-
- liver_X11706Liv_CAAA liver_X11700Liv_ATTC liver_X11698Liv_ACTG liver_X11699Liv_ATGA heart_X11706He_AGTTC heart_X11699He_GGCTA heart_X11698He_TAGCT heart_X11700He_CTTGT
-
- Min. :0.0043 Min. :0.0043 Min. :0.0043 Min. :0.0043 Min. :0.0043 Min. :0.0043 Min. :0.0043 Min. :0.0043
-
- 1st Qu.:0.3032 1st Qu.:0.0043 1st Qu.:0.3032 1st Qu.:0.0043 1st Qu.:0.0043 1st Qu.:0.0043 1st Qu.:0.0043 1st Qu.:0.0043
-
- Median :0.7789 Median :0.6031 Median :0.6998 Median :0.6031 Median :0.4786 Median :0.4786 Median :0.4786 Median :0.4786
-
- Mean :1.0519 Mean :1.0343 Mean :0.9855 Mean :0.9966 Mean :0.9210 Mean :0.9428 Mean :1.0205 Mean :0.9753
-
- 3rd Qu.:1.5410 3rd Qu.:1.6335 3rd Qu.:1.4473 3rd Qu.:1.5534 3rd Qu.:1.5770 3rd Qu.:1.5855 3rd Qu.:1.7161 3rd Qu.:1.6022
-
- Max. :5.8209 Max. :5.6905 Max. :5.7999 Max. :5.7215 Max. :5.3609 Max. :5.3589 Max. :5.6967 Max. :5.3702
-
- NA's :650 NA's :969 NA's :664 NA's :886 NA's :902 NA's :957 NA's :821 NA's :950
-
-[1] normalised contig counts by sample:
-
- liver_X11706Liv_CAAA liver_X11700Liv_ATTC liver_X11698Liv_ACTG liver_X11699Liv_ATGA heart_X11706He_AGTTC heart_X11699He_GGCTA heart_X11698He_TAGCT heart_X11700He_CTTGT
-
- Min. :-Inf Min. :-Inf Min. :-Inf Min. :-Inf Min. :-Inf Min. :-Inf Min. :-Inf Min. :-Inf
-
- 1st Qu.: 0 1st Qu.:-Inf 1st Qu.: 0 1st Qu.:-Inf 1st Qu.:-Inf 1st Qu.:-Inf 1st Qu.:-Inf 1st Qu.:-Inf
-
- Median : 0 Median : 0 Median : 0 Median : 0 Median : 0 Median : 0 Median : 0 Median : 0
-
- Mean :-Inf Mean :-Inf Mean :-Inf Mean :-Inf Mean :-Inf Mean :-Inf Mean :-Inf Mean :-Inf
-
- 3rd Qu.: 1 3rd Qu.: 1 3rd Qu.: 1 3rd Qu.: 1 3rd Qu.: 1 3rd Qu.: 1 3rd Qu.: 1 3rd Qu.: 1
-
- Max. : 6 Max. : 6 Max. : 6 Max. : 5 Max. : 5 Max. : 5 Max. : 6 Max. : 5
-
-[1] Using ncol rawrs= 8
-
-[1] # edgeR Top tags\n
-
- Name logFC logCPM LR PValue adj.p.value Dispersion totreads URL
-
-Mir208a Mir208a -11.840751 8.465017 594.16946 3.104543e-131 3.542284e-128 0.05171220 4638 Mir208a
-
-Mir149 Mir149 -7.008984 8.861767 484.30321 2.473909e-107 1.411365e-104 0.04959937 6164 Mir149
-
-Mir208b Mir208b -13.291635 9.905945 417.69758 7.737463e-93 2.942815e-90 0.10508096 14756 Mir208b
-
-Mir122a Mir122a 10.514683 12.478088 415.17429 2.740525e-92 7.817349e-90 0.10803882 90428 Mir122a
-
-Mir204 Mir204 -7.498162 7.634507 341.30678 3.313430e-76 7.561247e-74 0.06907958 2601 Mir204
-
-Mir499 Mir499 -13.577454 8.700078 325.79199 7.930755e-73 1.508165e-70 0.12042284 6527 Mir499
-
-Mir490 Mir490 -8.534394 6.991023 303.17184 6.710366e-68 1.093790e-65 0.07949711 1741 Mir490
-
-Mir192 Mir192 6.953853 17.169364 217.22867 3.638307e-49 5.189135e-47 0.12700995 2325567 Mir192
-
-Mir802 Mir802 11.440805 6.593380 212.88059 3.231644e-48 4.097007e-46 0.12273671 1514 Mir802
-
-Mir1948 Mir1948 7.418142 7.252734 195.66958 1.840248e-44 2.099723e-42 0.12060221 2404 Mir1948
-
-Mir194-2 Mir194-2 5.298950 7.811522 191.85588 1.250960e-43 1.297587e-41 0.08670751 3570 Mir194-2
-
-Mir23a Mir23a -3.153807 9.529402 177.53185 1.676248e-40 1.593833e-38 0.04442763 10118 Mir23a
-
-Mir181c Mir181c -3.767686 10.639598 169.87390 7.883295e-39 6.919107e-37 0.06368883 23605 Mir181c
-
-Mir3073 Mir3073 10.686337 5.859950 164.86740 9.778593e-38 7.969554e-36 0.14069249 904 Mir3073
-
-Mir181d Mir181d -3.643963 7.300371 162.18591 3.767663e-37 2.865936e-35 0.05729574 2139 Mir181d
-
-Mir195 Mir195 -3.203683 8.215089 150.20548 1.563314e-34 1.114838e-32 0.05235020 3962 Mir195
-
-Mir10b Mir10b -5.182616 13.946466 147.24793 6.926819e-34 4.649118e-32 0.12268790 197340 Mir10b
-
-Mir101b Mir101b 3.759962 11.863187 136.31359 1.703812e-31 1.080028e-29 0.07961343 59019 Mir101b
-
-Mir378 Mir378 -3.115599 8.119617 126.76408 2.092233e-29 1.256441e-27 0.05942391 4075 Mir378
-
-Mir27a Mir27a -3.064687 10.642480 124.98911 5.117477e-29 2.919520e-27 0.06113852 21886 Mir27a
-
-Mir182 Mir182 5.057509 8.846381 123.17765 1.275060e-28 6.927826e-27 0.13653707 7189 Mir182
-
-Mir322 Mir322 -3.194159 9.012888 107.34926 3.732413e-25 1.935765e-23 0.07536483 7074 Mir322
-
-Mir199b Mir199b -5.520119 4.792610 102.10724 5.259607e-24 2.609223e-22 0.13417024 370 Mir199b
-
-Mir181a-2 Mir181a-2 -3.000177 7.637692 101.38361 7.578821e-24 3.603098e-22 0.06896654 2817 Mir181a-2
-
-Mir125b-2 Mir125b-2 -2.987759 8.144514 91.72544 9.957640e-22 4.488356e-20 0.07737381 3837 Mir125b-2
-
-Dnm3os Dnm3os -3.331215 6.686950 91.67250 1.022763e-21 4.488356e-20 0.08810497 1401 Dnm3os
-
-Mir184 Mir184 -5.111350 4.234160 84.35542 4.133639e-20 1.686711e-18 0.13502324 247 Mir184
-
-Mir215 Mir215 -3.058208 6.447966 84.35278 4.139167e-20 1.686711e-18 0.08138517 1182 Mir215
-
-Mir133b Mir133b -8.383611 3.584760 83.96681 5.031517e-20 1.960318e-18 0.17482280 159 Mir133b
-
-Mir150 Mir150 -2.883446 8.307765 83.91918 5.154210e-20 1.960318e-18 0.08008123 4229 Mir150
-
-Mir3074-2 Mir3074-2 -2.778308 7.935651 83.74839 5.619282e-20 2.040616e-18 0.07424646 3470 Mir3074-2
-
-Mir24-2 Mir24-2 -2.778307 7.935651 83.71222 5.723024e-20 2.040616e-18 0.07427992 3470 Mir24-2
-
-Mir193 Mir193 5.176579 4.801090 83.19222 7.445011e-20 2.574169e-18 0.14794861 421 Mir193
-
-Scarna17 Scarna17 2.182159 9.244479 81.91330 1.421894e-19 4.771710e-18 0.04982909 9224 Scarna17
-
-Mir214 Mir214 -3.271172 6.271755 80.43948 2.997458e-19 9.771712e-18 0.09566584 1048 Mir214
-
-Snord104 Snord104 2.330488 11.053611 79.50529 4.809369e-19 1.524303e-17 0.05915990 33458 Snord104
-
-Mir200a Mir200a 7.201555 4.139422 77.35503 1.428304e-18 4.365755e-17 0.19287764 264 Mir200a
-
-Mir200b Mir200b 6.525423 5.752604 77.31985 1.453976e-18 4.365755e-17 0.26237966 888 Mir200b
-
-Mir21 Mir21 2.923147 13.825255 75.51798 3.620938e-18 1.059357e-16 0.09395834 229120 Mir21
-
-Mir203 Mir203 1.956427 8.767610 75.17870 4.299815e-18 1.226522e-16 0.04381710 6739 Mir203
-
-Mir155 Mir155 -3.886731 5.068563 73.81316 8.587210e-18 2.389758e-16 0.12522673 463 Mir155
-
-Cyp3a25 Cyp3a25 8.681501 3.972085 72.29680 1.851471e-17 5.029829e-16 0.23125383 226 Cyp3a25
-
-Rabggtb Rabggtb 1.934093 10.298211 72.02043 2.129809e-17 5.651422e-16 0.04596646 19535 Rabggtb
-
-Mir23b Mir23b -2.100584 10.184110 71.44225 2.854935e-17 7.403367e-16 0.05416378 16387 Mir23b
-
-Snord52 Snord52 2.207491 10.217554 71.27974 3.100027e-17 7.860292e-16 0.05941483 18059 Snord52
-
-Gm5441 Gm5441 -6.881248 3.538457 70.05615 5.764004e-17 1.429724e-15 0.20097284 142 Gm5441
-
-Mir153 Mir153 -6.857671 3.517446 69.37600 8.137282e-17 1.975455e-15 0.20158808 140 Mir153
-
-Mir132 Mir132 -2.858294 5.938312 64.52507 9.531204e-16 2.265647e-14 0.09274248 857 Mir132
-
-1110038B12Rik 1110038B12Rik 2.195962 11.253090 62.92015 2.152583e-15 5.012443e-14 0.06712174 37066 1110038B12Rik
-
-Snord91a Snord91a 2.654072 6.557504 62.40549 2.795431e-15 6.379174e-14 0.08637410 1437 Snord91a
-
-[1] # 416 tags significant at adj p= 0.05
-
-
-
-
-
Other images and outputs
-(Click on a thumbnail image to download the corresponding original PDF image)
-
-
-
Other log output
-
-
-
-## Toolfactory generated command line = Rscript - None None
-
-Got TCols=1 5 6 7; CCols=2 3 4 8
-
-[1] # Quantiles for non-zero row counts:
-
- 0% 10% 20% 30% 40% 50% 60% 70% 80% 90% 100%
-
- 1.0 1.0 2.0 3.0 4.0 8.0 13.0 24.0 86.6 753.0 2325567.0
-
-[1] Read 3242 contigs. Removed 1494 with no reads. After filtering at count quantile =0.3, there are 1141 contigs
-
-[1] "@@ using genecards substitution for urls"
-
-[1] # urls
-
-[1] 0610005C13Rik 0610007N19Rik 0610008F07Rik 0610009L18Rik 0610012G03Rik
-
-[6] 0610031O16Rik
-
-[1] # Total low count contigs per sample = 170,67,203,86,145,111,155,120
-
-[1] Using samples: liver_X11706Liv_CAAAAG_L003_R1_001_trimmed.fastq_bwa.sam.bam,liver_X11700Liv_ATTCCT_L003_R1_001_trimmed.fastq_bwa.sam.bam,liver_X11698Liv_ACTGAT_L003_R1_001_trimmed.fastq_bwa.sam.bam,liver_X11699Liv_ATGAGC_L003_R1_001_trimmed.fastq_bwa.sam.bam,heart_X11706He_AGTTCC_L001_R1_001_trimmed.fastq_bwa.sam.bam,heart_X11699He_GGCTAC_L001_R1_001_trimmed.fastq_bwa.sam.bam,heart_X11698He_TAGCTT_L001_R1_001_trimmed.fastq_bwa.sam.bam,heart_X11700He_CTTGTA_L001_R1_001_trimmed.fastq_bwa.sam.bam
-
-[1] Using design matrix:
-
- (Intercept) groupliver
-
-1 1 1
-
-2 1 1
-
-3 1 1
-
-4 1 1
-
-5 1 0
-
-6 1 0
-
-7 1 0
-
-8 1 0
-
-attr(,"assign")
-
-[1] 0 1
-
-attr(,"contrasts")
-
-attr(,"contrasts")$group
-
-[1] contr.treatment
-
-R version 3.0.1 (2013-05-16)
-
-Platform: x86_64-unknown-linux-gnu (64-bit)
-
-locale:
-
- [1] LC_CTYPE=en_AU.UTF-8 LC_NUMERIC=C LC_TIME=en_AU.UTF-8 LC_COLLATE=en_AU.UTF-8 LC_MONETARY=en_AU.UTF-8 LC_MESSAGES=en_AU.UTF-8 LC_PAPER=C LC_NAME=C LC_ADDRESS=C LC_TELEPHONE=C LC_MEASUREMENT=en_AU.UTF-8 LC_IDENTIFICATION=C
-
-attached base packages:
-
- [1] parallel splines methods grid stats graphics grDevices utils datasets base
-
-other attached packages:
-
- [1] RColorBrewer_1.0-5 DESeq2_1.0.18 RcppArmadillo_0.3.900.7 Rcpp_0.10.4 lattice_0.20-15 Biobase_2.20.1 GenomicRanges_1.12.4 IRanges_1.18.2 BiocGenerics_0.6.0 edgeR_3.2.4 limma_3.16.7 gplots_2.11.3 MASS_7.3-28 KernSmooth_2.23-10 caTools_1.14 gdata_2.13.2 gtools_3.0.0 stringr_0.6.2
-
-loaded via a namespace (and not attached):
-
- [1] annotate_1.38.0 AnnotationDbi_1.22.6 bitops_1.0-5 DBI_0.2-7 genefilter_1.42.0 locfit_1.5-9.1 RSQLite_0.11.4 stats4_3.0.1 survival_2.37-4 XML_3.98-1.1 xtable_1.7-1
-
-
-
-
-
All output files available for downloading
-
-
-
Mir192
-Mir208a -11.0150177152075 3.93955375669227 -23.2524066836307 1.11893807599952e-12 6.38354172357727e-10 17.2086622097974 4638 Mir208a
-Mir122a 10.4261254701779 8.16986409392255 21.7229119192922 2.85968233611017e-12 1.08763251516723e-09 17.760171141852 90428 Mir122a
-Mir149 -7.03046258655617 6.31608073609863 -20.8838348040628 4.91549082404237e-12 1.40214375755809e-09 17.2776088871455 6164 Mir149
-Mir208b -12.4332279840446 4.60762179736006 -19.5924575126382 1.17919871718875e-11 2.69093147262473e-09 15.6836663826186 14756 Mir208b
-Mir10b -5.1309149063532 12.2628671946242 -18.2420234752943 3.12499057505143e-11 4.96397841614262e-09 16.2215027882858 197340 Mir10b
-Mir143hg -2.24922058313374 16.2444825488726 -18.0824813146443 3.52173903971276e-11 4.96397841614262e-09 16.0266951625541 1407364 Mir143hg
-Mir143 -2.25106712131643 16.235859869169 -18.0814805993441 3.524391092512e-11 4.96397841614262e-09 16.0260836456534 1399819 Mir143
-Mir499 -11.5675289490546 3.78745976580796 -17.9420857279689 3.91549568319751e-11 4.96397841614262e-09 14.8217405828874 6527 Mir499
-Mir802 9.15843445824816 2.91576747878654 17.3165224121399 6.33861560587965e-11 7.23236040630868e-09 14.381577240531 1514 Mir802
-Mir3073 8.42054159318439 2.54571889776166 16.7026571721381 1.03306635740721e-10 1.03604453339228e-08 13.9858447292853 904 Mir3073
-Mir148a 2.63821345578617 15.4435819751152 16.5481882215215 1.17118649515038e-10 1.03604453339228e-08 14.8147917664862 1002397 Mir148a
-Mir101b 3.76572195114225 10.8508440499081 16.5385659719288 1.1804188373444e-10 1.03604453339228e-08 14.9000274171241 59019 Mir101b
-Mir490 -8.47437764634465 3.75069567634692 -16.2596504905533 1.48481644820999e-10 1.21012540529114e-08 13.4246171016517 1741 Mir490
-Mir21 2.93853744034991 13.1642916950886 15.3754036511693 3.14833456057776e-10 2.39483315574615e-08 13.8676979022068 229120 Mir21
-Mir181c -3.74256009957124 9.62955774646065 -15.2423608550805 3.53706264458683e-10 2.52236779842098e-08 13.8104046176901 23605 Mir181c
-Mir204 -7.68442507149438 4.77517348536933 -15.0334839919296 4.2542677795722e-10 2.85536443323052e-08 12.8224274879526 2601 Mir204
-Mir23a -3.16576837850821 8.78965917558611 -14.6311785109623 6.11068192724496e-10 3.87349337721472e-08 13.2691736804205 10118 Mir23a
-Mir181d -3.63621106402109 6.37132182424908 -14.3170733565449 8.15750840848868e-10 4.89879847057136e-08 12.9563328312209 2139 Mir181d
-Mir133b -6.49354876170712 1.25448620431148 -13.969968060601 1.12993427319653e-09 6.44627502858619e-08 11.9826837063041 159 Mir133b
-Mir27a -3.10693537246128 9.92557960348829 -13.8382510839158 1.28101104196848e-09 6.96015999469543e-08 12.5130856443239 21886 Mir27a
-Mir194-2 5.26413595786074 6.08976151689046 13.0440120203829 2.79288399641768e-09 1.44849119996026e-07 11.7157527118771 3570 Mir194-2
-Mir195 -3.21659545049586 7.4509349905835 -12.869478368273 3.33278798407795e-09 1.65335264775345e-07 11.5875227405737 3962 Mir195
-Mir27b -1.97637614533106 15.0957731023791 -11.75603589654 1.08219717999805e-08 5.14494575990741e-07 10.1277185662145 625308 Mir27b
-Mir378 -3.09739319841142 7.38320489393809 -11.6841625470748 1.17137125863851e-08 5.34613842442616e-07 10.3296922348831 4075 Mir378
-Snord104 2.33737428989677 10.6109023861403 11.4956750870273 1.44448164322638e-08 6.33905213431269e-07 10.0233949189609 33458 Snord104
-Mir1983 -5.89550024150745 0.993185099223749 -11.4458119994178 1.52754786535047e-08 6.44160462853232e-07 9.74926029381244 101 Mir1983
-Mir322 -3.29661750880005 8.21534154356388 -11.4153616003567 1.58076187203247e-08 6.44160462853232e-07 10.0084716002011 7074 Mir322
-Mir200a 6.19156065085543 1.79813092499896 11.3221723123067 1.75622912046568e-08 6.9098531946598e-07 9.66229453831667 264 Mir200a
-Mir215 -3.04587333807051 5.75442336214621 -11.1481336257529 2.14182153707674e-08 8.08245865886245e-07 9.75326755116029 1182 Mir215
-Dnm3os -3.36334357719079 5.86074322417943 -11.0922610835813 2.28395969947309e-08 8.08245865886245e-07 9.68949616901383 1401 Dnm3os
-Mir182 4.90399541739044 7.1511683493624 11.0744681203078 2.33130367310143e-08 8.08245865886245e-07 9.65884218207857 7189 Mir182
-Mir181a-2 -3.04829832099813 6.94146510070354 -11.0721276255975 2.33760855164295e-08 8.08245865886245e-07 9.64401697815694 2817 Mir181a-2
-Mir1948 7.19552540631629 4.5513492833967 11.0054920626234 2.52493600829575e-08 8.47338819254543e-07 9.34179361673467 2404 Mir1948
-Mir214 -3.28087400431203 5.47844506177362 -10.7682572190636 3.3325545851092e-08 1.0864127947456e-06 9.3185039394887 1048 Mir214
-Mir153 -5.9638030672045 1.43863148956561 -10.7270821099311 3.49874201497232e-08 1.09398957489501e-06 9.03556928822473 140 Mir153
-Cyp3a25 6.3181999278218 1.48889330889732 10.698226339624 3.62044305804168e-08 1.09398957489501e-06 9.02497280953977 226 Cyp3a25
-Gm5441 -5.98217559924296 1.44849534030207 -10.6928905219357 3.64343591989574e-08 1.09398957489501e-06 9.00036161342169 142 Gm5441
-Mir125b-2 -3.07767777869034 7.43160584496732 -10.4466676018996 4.89307304174606e-08 1.43153752323904e-06 8.88425047860251 3837 Mir125b-2
-Mir133a-1 -5.1446707114636 0.590326422018506 -10.3582048674166 5.44722862183524e-08 1.5538219643785e-06 8.57553468686339 60 Mir133a-1
-1110038B12Rik 2.2267024913641 10.8487089345135 10.1946092089644 6.6553123680318e-08 1.85212473461568e-06 8.43930767784171 37066 1110038B12Rik
-Mir132 -2.84755882904953 5.32118389129247 -10.1109518209472 7.38029688527407e-08 2.00498065383279e-06 8.53149092529729 857 Mir132
-Rabggtb 1.93577875106629 9.98741711657765 9.92899544482161 9.26282059254969e-08 2.45787867351144e-06 8.13338404178509 19535 Rabggtb
-Mir504 -5.25612736011945 0.622108812393712 -9.89289391617729 9.69359452558378e-08 2.51372530765707e-06 8.06885345567596 69 Mir504
-Mir150 -2.93853062743745 7.62978695478889 -9.84210172881295 1.0336018288322e-07 2.62075485932786e-06 8.11646444295523 4229 Mir150
-Mir199b -5.75281586680568 2.88051428778536 -9.82392040215114 1.05768314120536e-07 2.62351405242461e-06 7.97938664656761 370 Mir199b
-Mir23b -2.12412853458823 9.81411903779331 -9.80631552439508 1.08156895246613e-07 2.62568122290182e-06 7.97946421769546 16387 Mir23b
-Mir24-2 -2.83397931671342 7.30836912335631 -9.76719188905173 1.13672435494913e-07 2.64694385509584e-06 8.03055035937719 3470 Mir24-2
-Mir3074-2 -2.83397931671342 7.30836912335631 -9.76719188905173 1.13672435494913e-07 2.64694385509584e-06 8.03055035937719 3470 Mir3074-2
-Mir155 -3.90660012470502 3.98990000150695 -9.73217278591154 1.18862734970705e-07 2.71244761203149e-06 8.04651834419983 463 Mir155
-Snord52 2.24297808473649 9.80695706696893 9.65508926768283 1.31194241930095e-07 2.93514960867135e-06 7.78317356265822 18059 Snord52
-Scarna17 2.22135685073443 8.84690751573681 9.60031550237377 1.4077767610154e-07 3.08898708522803e-06 7.75116302071276 9224 Scarna17
-Mir201 -5.13478218238105 0.574435171385817 -9.36375298852343 1.91556946938131e-07 4.12389578219637e-06 7.45101629313275 63 Mir201
-Mir184 -5.19740389169544 2.57741455998865 -9.28503096123923 2.12504578894189e-07 4.42570763295992e-06 7.34294491810118 247 Mir184
-Snord91a 2.64601724328653 5.9737770599439 9.28208610647144 2.1333384733812e-07 4.42570763295992e-06 7.45176303063652 1437 Snord91a
-Mir193 4.93970055277848 3.14663535122407 9.21323530535893 2.33732739541295e-07 4.76230456815389e-06 7.28752724029761 421 Mir193
-Mir470 5.07947201153691 1.71052510073336 8.84181308472679 3.85901653714362e-07 7.72480327873838e-06 6.83971839651152 157 Mir470
-0610031O16Rik 4.84298796174609 0.739739561937192 8.8004727262221 4.08431072700958e-07 8.03482506813436e-06 6.77016207746292 78 0610031O16Rik
-Mir203 1.9396775595845 8.44497102033975 8.70156015908293 4.6818189744087e-07 9.05416177932259e-06 6.53224466632053 6739 Mir203
-1810019D21Rik 5.37088028736873 1.02158093294187 8.63951664435106 5.10331246821015e-07 9.70479921037964e-06 6.58253399607689 117 1810019D21Rik
-D7Ertd143e 4.74135480360802 0.690096187370941 8.59182875086527 5.45451616539556e-07 1.02026277782235e-05 6.49996146777963 73 D7Ertd143e
-Mir181a-1 -3.20886334319296 4.33388500974742 -8.528721562826 5.95908204570219e-07 1.09666332486229e-05 6.48742379588458 506 Mir181a-1
-Mir547 -4.64199116509563 0.384583900671288 -8.48569977551612 6.33121735643368e-07 1.14665381010966e-05 6.34288346197563 42 Mir547
-Mir3102 -4.82802034015575 1.26816340424779 -8.40617041640129 7.08539703084848e-07 1.26319343940595e-05 6.2533959548051 87 Mir3102
-Mir194-1 3.86792676846218 4.28030595336869 8.2361953191898 9.03449017918911e-07 1.5859005068392e-05 6.08687440143381 635 Mir194-1
-Mir199a-2 -3.62193724804755 3.76746624824118 -8.22528846947687 9.17754251311817e-07 1.58660242537391e-05 6.07294487982063 352 Mir199a-2
-Mir375 4.36561952992499 1.70304479419652 8.20239976081094 9.48559026077637e-07 1.61538186381281e-05 5.9804850351652 123 Mir375
-Mir128-1 -2.79500838795041 4.68404652058909 -8.16636754121193 9.99287948408945e-07 1.67674639578619e-05 5.95537435854342 527 Mir128-1
-Mir1a-1 -4.50930254765404 0.235845136893643 -8.15352480043541 1.01805558742015e-06 1.68348032644405e-05 5.89233114702952 42 Mir1a-1
-Mir17hg 1.26324530315481 13.08692945461 8.08792426896809 1.11990826888155e-06 1.80004069127122e-05 5.39248242771111 145451 Mir17hg
-Mir92-1 1.26323093975761 13.0869221993444 8.08780961117952 1.12009543453336e-06 1.80004069127122e-05 5.39230857078851 145450 Mir92-1
-Mir881 4.55329779507755 0.622217688176746 7.98090604480001 1.30985575977083e-06 2.06385233899717e-05 5.68307629847666 64 Mir881
-Mir125b-1 -3.19780406116102 4.7293501044755 -7.96524973476641 1.340381181277e-06 2.06385233899717e-05 5.66721192306587 609 Mir125b-1
-2610203C20Rik -3.20042083590071 4.73071629949528 -7.96367997663051 1.3434829565975e-06 2.06385233899717e-05 5.66487879544241 610 2610203C20Rik
-Scnn1b -4.63822537309801 0.37290502628334 -7.9570799219013 1.35660758479218e-06 2.06385233899717e-05 5.63911983957 45 Scnn1b
-Mir193b -3.19095319216208 3.51292960275358 -7.90681185253976 1.46112366345347e-06 2.19360802631633e-05 5.62073482323402 260 Mir193b
-Mir183 4.30421971951602 3.92737361468754 7.78136892736858 1.76081314682182e-06 2.60215226213659e-05 5.44000583749589 563 Mir183
-5430416N02Rik 3.07746071410873 4.3937689770433 7.77455061595853 1.77885956570249e-06 2.60215226213659e-05 5.40856341816749 564 5430416N02Rik
-Mir125a -2.6112312467571 10.9299667279975 -7.67497504879118 2.06586606398761e-06 2.98373820127831e-05 4.87458713303236 37867 Mir125a
-Mir200b 6.64163006978911 3.12821174098826 7.58298811849222 2.37461716273863e-06 3.38679772835598e-05 5.13195387121669 888 Mir200b
-C430049B03Rik -1.92074554462898 10.5496297843175 -7.55549117760725 2.4760890707944e-06 3.48792299972396e-05 4.70418935748661 25716 C430049B03Rik
-Terc 4.24682289892723 0.87844372666952 7.3826580782883 3.2281439398588e-06 4.49184418948646e-05 4.83681905205792 66 Terc
-Mir871 5.21513327520529 2.43957936484213 7.24439581531717 4.00226877508459e-06 5.50191406309821e-05 4.63418699567578 290 Mir871
-Mir30e -1.90475431278526 13.2693114305891 -7.14894534136424 4.6492913699815e-06 6.28199839913465e-05 3.89856793405104 186796 Mir30e
-Mir24-1 -3.10183666628555 3.10602318965769 -7.13671325687185 4.73984945200915e-06 6.28199839913465e-05 4.48008371426601 189 Mir24-1
-Mir3074-1 -3.10183666628555 3.10602318965769 -7.13671325687185 4.73984945200915e-06 6.28199839913465e-05 4.48008371426601 189 Mir3074-1
-Mir592 4.27837071128313 0.882966518707851 7.13005059451541 4.78995495814825e-06 6.28199839913465e-05 4.46386515426502 70 Mir592
-Serpina4-ps1 6.28609584979245 1.44994282762173 7.10887070838901 4.95297318411398e-06 6.42198000349325e-05 4.43976042902202 295 Serpina4-ps1
-Mirlet7e -1.98704484524714 6.38418687649397 -6.91936550313624 6.69984149789542e-06 8.58934735853783e-05 3.9044291222869 1576 Mirlet7e
-Mir3470b 4.76222273641772 1.545054677666 6.90067154705821 6.90430035193184e-06 8.75311855728247e-05 4.11927719036494 132 Mir3470b
-Mir497 -2.37449282835512 5.72555109896591 -6.88407718002354 7.09129622786183e-06 8.89139450108829e-05 3.89837376299718 963 Mir497
-Mir30d -1.6250750764544 13.1824457426439 -6.86162843142705 7.35278174335401e-06 9.11904779257275e-05 3.42562585807056 161730 Mir30d
-Mir107 1.66807649183652 7.69910580818381 6.8393447582273 7.62239107335082e-06 9.35177227386374e-05 3.6976878474277 3843 Mir107
-Mir301 -1.74763355751926 6.9632575863254 -6.82958967456103 7.7436706688371e-06 9.39949812036503e-05 3.72033936484245 2119 Mir301
-Mir455 2.46320289727146 5.30404932290074 6.81532109954182 7.92473126605604e-06 9.51801934165257e-05 3.83331724079003 895 Mir455
-Mir429 4.86439995826456 3.23263249974835 6.78791698606005 8.28507245768243e-06 9.84715382730797e-05 3.94480735955982 499 Mir429
-1700003L19Rik -3.76057540139707 -0.126261497218445 -6.63064169305684 1.07147990447279e-05 0.000126033542791258 3.68122560260964 23 1700003L19Rik
-Mir99a -2.28512022818228 9.92572736694444 -6.62442810768864 1.08249668655068e-05 0.000126033542791258 3.2109507357583 17575 Mir99a
-Mir145 -1.97697703068737 8.78484403570673 -6.5439327901519 1.23647594606541e-05 0.000141146069525717 3.13555880659816 7539 Mir145
-Mir34b -4.12275476924448 0.708468030075098 -6.54365850253687 1.23703829558034e-05 0.000141146069525717 3.55740492991767 54 Mir34b
-Mir31 2.28911995870681 6.51541747970347 6.52931766820141 1.26681737242473e-05 0.000143112734845209 3.25621845009615 2078 Mir31
-Mir181b-1 -3.60801009779468 -0.132126628141882 -6.46494720684188 1.41005553764556e-05 0.000157732683181724 3.42410398459059 19 Mir181b-1
-Gm6307 -4.1578316997704 0.656018151435715 -6.45273564502753 1.43909587108892e-05 0.000159418290185675 3.41462429299529 52 Gm6307
-Scarna6 1.69929242985022 7.02301841351445 6.42269285853436 1.51324405034754e-05 0.000166020332831399 3.03238527080513 2398 Scarna6
-Snord45b 1.94022355970573 6.80826479898751 6.39728013438808 1.57909283820436e-05 0.000171594755084873 3.00447879542696 2199 Snord45b
-Mir212 -2.84645310030162 3.44913875490104 -6.35557690856707 1.6937466935156e-05 0.000182317450688802 3.21240862806012 232 Mir212
-Mir488 -4.10203604485773 1.24180834532503 -6.29103817686794 1.88870111723183e-05 0.000201402614463693 3.15543310741006 78 Mir488
-Mir1943 -2.71589064856915 3.44876720857909 -6.23580114025192 2.07423167962376e-05 0.000219138735782473 3.00834314558259 215 Mir1943
-Gas5 1.24087717560169 10.5129034284973 6.13133629490868 2.4792457454819e-05 0.000259524715192188 2.31915097100889 24887 Gas5
-Mir1960 -3.55886465849503 0.603332307653829 -6.02805967736536 2.96173517543744e-05 0.000307212712288556 2.72737825973636 36 Mir1960
-Snord72 1.83422077226714 4.99202771858388 6.01300538064759 3.03988327484681e-05 0.000312478091585605 2.48059356064701 603 Snord72
-Mir126 -1.4123938474776 14.7113257499272 -5.9690966101592 3.28038341776394e-05 0.000334189060684701 1.77670178050375 420720 Mir126
-Mir181b-2 -3.5537298874584 2.37784481058975 -5.74465057345259 4.86143755138839e-05 0.000490876127976474 2.24688113349229 154 Mir181b-2
-4930581F22Rik 3.25147651228939 0.329341147921603 5.72231806379132 5.05741508633493e-05 0.000506185141535803 2.2176701707354 33 4930581F22Rik
-Taf1d 1.56967838004803 6.27598295057893 5.62971411199061 5.96235762303463e-05 0.000591569569381088 1.67884064404776 1421 Taf1d
-Mir324 -2.38077905852261 3.65370681185719 -5.61738196066422 6.09504435595697e-05 0.000599521173288526 1.9104544791018 248 Mir324
-Mtmr2 -2.30493988089979 4.77764446891153 -5.57410629776523 6.58554908247018e-05 0.000642231752401579 1.7123130370103 580 Mtmr2
-Mir137 3.41092416262533 0.0324356592441258 5.50287186084007 7.48455682327983e-05 0.000723718587742567 1.84456682895684 29 Mir137
-Snhg1 0.975366701589908 11.1969347059892 5.49575538415102 7.5811401213261e-05 0.000726897552809502 1.12394645028672 37837 Snhg1
-Mir34a -2.05826883405221 3.36051649740781 -5.47484354411999 7.87253643157781e-05 0.000748547005702523 1.67723038143596 180 Mir34a
-Mir298 -3.44904214184284 0.481437816526014 -5.39740371005322 9.05725273791661e-05 0.000854076477187012 1.66441956376117 37 Mir298
-Mir30b -1.37954359870678 9.2115221848988 -5.37206514503938 9.4840390621554e-05 0.000886990866386828 1.00959570224732 10011 Mir30b
-2310001H17Rik 3.60260656982356 0.877139295086231 5.35615735698035 9.76262576906534e-05 0.000902593356272145 1.57720822721783 54 2310001H17Rik
-Pex16 3.10814004056272 0.242483417469106 5.35355087544425 9.80907766676126e-05 0.000902593356272145 1.58678494520955 30 Pex16
-Mir741 3.33919133389387 0.432231427661093 5.2950378042311 0.000109146860855228 0.000996292545886519 1.47796989545021 36 Mir741
-Gm6313 -3.15860344908017 -0.430119305523511 -5.24231069726794 0.000120220067795944 0.00108865950281883 1.40353714409938 15 Gm6313
-Mir328 -1.36488724959 7.2282210636054 -5.23221518519415 0.000122470141866871 0.00110030261315039 0.870852174596449 2362 Mir328
-Snord33 1.25647224562943 7.71222650703403 5.19862342341357 0.000130277220055511 0.00116129928190108 0.778490918357933 3442 Snord33
-Rpph1 1.87063945690961 4.43992987975591 5.19124070458341 0.000132061294296316 0.0011680770293961 1.05386997375291 430 Rpph1
-Mir291a 3.17904342101315 -0.0791999402663102 5.18540568400292 0.000133489301957871 0.00117026083393732 1.2956738181937 24 Mir291a
-Mir186 -1.38629871411117 10.176089899221 -5.181881716386 0.000134359482248719 0.00117026083393732 0.594672202880173 18235 Mir186
-Gm16596 -3.02811906442667 -0.421976649282355 -5.15901843295933 0.000140150118907224 0.00121144913388744 1.25840752971795 12 Gm16596
-Mirlet7i -1.21381140575271 10.6031742297066 -5.15326347701587 0.000141648110216644 0.00121519168238489 0.514620675402163 26242 Mirlet7i
-Sra1 2.97648314190951 -0.188256184051246 5.14486604509538 0.000143863812461334 0.00122498962700285 1.22868620554498 19 Sra1
-Mir700 -3.05275751205424 3.03686027981893 -5.10658051111472 0.00015443097639702 0.00130522773384445 1.06937466394294 177 Mir700
-Mir30c-1 -1.44640830149114 5.51774362365196 -5.09058727395353 0.000159080836478697 0.0013266290585589 0.730639691134108 732 Mir30c-1
-Mir674 -1.94702895981213 4.45877434664642 -5.08988436247691 0.000159288502210841 0.0013266290585589 0.846234772297753 392 Mir674
-Snord45c 1.44139263505882 6.31780757188042 5.0752407566119 0.000163679307853258 0.00135146340163194 0.643628779392595 1427 Snord45c
-Ank1 -1.70157147221109 10.9929711198162 -5.07209350467361 0.000164639275045433 0.00135146340163194 0.337810380148678 33776 Ank1
-Mirlet7b -1.09478453248563 9.30463614623057 -5.06223764308063 0.000167683437276746 0.00136662001380548 0.418305977430397 10012 Mirlet7b
-0610008F07Rik 3.20935973501609 0.342617899865038 5.04843460516125 0.000172045196108449 0.00139222389191305 1.0441746904328 34 0610008F07Rik
-Snord4a 1.57395983217788 5.94089477513251 5.00029990452424 0.000188198499627571 0.00151221470475393 0.535941755206456 1151 Snord4a
-Mir3107 -1.70018651164628 9.99212523723331 -4.97672369154541 0.000196676176463643 0.00155838553711817 0.215189363582583 16873 Mir3107
-Mir486 -1.70018651164628 9.99212523723331 -4.97672369154541 0.000196676176463643 0.00155838553711817 0.215189363582583 16873 Mir486
-Mir100 -1.97076444192024 8.99815411447499 -4.96949043197095 0.000199355724522589 0.00156872332193292 0.262493038912075 8837 Mir100
-6430411K18Rik -3.18910263916585 -0.373872894349982 -4.91488268129579 0.000220845557812913 0.00170486995980212 0.826251830470595 17 6430411K18Rik
-Mir433 -3.18910263916585 -0.373872894349982 -4.91488268129579 0.000220845557812913 0.00170486995980212 0.826251830470595 17 Mir433
-Mir190 -2.07544392773473 3.1544454577673 -4.91417324518583 0.000221140012314386 0.00170486995980212 0.671557118650327 163 Mir190
-Mir668 -2.84374273013661 -0.157703843092941 -4.86996462339487 0.000240314465841743 0.00184026043976798 0.746753746471687 15 Mir668
-0610012G03Rik 2.84115361016785 -0.244188556172649 4.84933497977366 0.000249843031682205 0.00190047266099598 0.705829411755822 17 0610012G03Rik
-Mirlet7d -1.19906882560952 10.0080528514984 -4.83828196963314 0.000255108219097298 0.00192767203966899 -0.0535917366982233 16847 Mirlet7d
-Mir320 -1.40563797109219 6.563348272824 -4.77568906174122 0.000287168062262582 0.00215564973053688 0.0467165593444996 1651 Mir320
-Snord66 1.15430111322029 8.03351541888005 4.75658981303321 0.00029775850741536 0.00222053893438514 -0.0877963597335594 4212 Snord66
-Hgd 4.54425664237216 0.975547692617975 4.73952572490202 0.000307561641064749 0.00225560361403978 0.450492806487889 137 Hgd
-Aqp9 4.93135714830861 0.753510541775538 4.73814880056307 0.000308367063909922 0.00225560361403978 0.445426512401092 161 Aqp9
-Mir221 -1.08377350661343 8.47402248983799 -4.73470478811828 0.000310391167513083 0.00225560361403978 -0.161171563827692 5659 Mir221
-Atf5 3.74327970750113 0.168725495917353 4.73192727585554 0.00031203354916423 0.00225560361403978 0.467422722695712 50 Atf5
-Ahsg 7.43012370228481 2.43819500653074 4.73140267365542 0.000312344759875797 0.00225560361403978 0.392509485594371 1524 Ahsg
-Cyp2d13 3.62058562658928 0.099076105394318 4.71784217799444 0.000320501474638856 0.00229995083372915 0.445950346991055 44 Cyp2d13
-Mir292 3.55331832828793 0.0808135496327816 4.67052458846538 0.000350727059524427 0.00250112234323357 0.360392052911509 41 Mir292
-Proc 4.16579682989808 0.376893953921531 4.63475223165321 0.000375520073648099 0.00266129443498435 0.275862327084029 83 Proc
-2610019E17Rik 1.58277820027238 5.58959301890268 4.63093795449771 0.00037826821496869 0.00266422242764985 -0.140287526130874 892 2610019E17Rik
-Mir379 -2.08294744907303 3.05372097245691 -4.61798165733268 0.000387758909131681 0.00271431236392177 0.128998572399559 153 Mir379
-Mir96 3.092187161072 -0.127577830654966 4.61264491367143 0.000391739223724717 0.00272545398945063 0.269031262574771 24 Mir96
-5033403H07Rik 3.03100334960097 -0.167104636116587 4.55138913141517 0.00044055961680218 0.00304390944849929 0.159657330767462 23 5033403H07Rik
-Mir582 -4.60557103590561 3.35812677089552 -4.5486926708253 0.00044284747454065 0.00304390944849929 0.0591283272554897 566 Mir582
-Mir335 -1.27174458468766 6.43063411797007 -4.54414079104836 0.000446737391037914 0.00305225965972611 -0.393123932477534 1318 Mir335
-Gm5424 4.79310957596335 1.09020146508355 4.53505892344961 0.000454603987554657 0.00308751874880871 0.0640172708933422 181 Gm5424
-Snord96a 1.64486304749729 4.67116544357615 4.51910388563813 0.0004687711663005 0.00316489882099923 -0.255892987917286 487 Snord96a
-Fam120b 3.09294836244015 0.400892342309139 4.51279274228026 0.000474499826623265 0.00318473118927733 0.0711882890790463 39 Fam120b
-1810032O08Rik 1.41990709594509 5.47749401704587 4.44622801412284 0.000539494231805467 0.00359978314906455 -0.491596569959665 801 1810032O08Rik
-D830005E20Rik -2.66421484690988 -0.635454055345691 -4.43818702356919 0.00054794279494766 0.00363489958741442 -0.0273233727843643 9 D830005E20Rik
-Mir3057 -1.76308589999293 3.90842103747244 -4.39033832828025 0.000601107772422842 0.00396453160886973 -0.421971049333088 244 Mir3057
-Dcaf11 3.64616824902598 1.34504089418874 4.36305371925593 0.000633768357283662 0.00415591779115321 -0.228339632338981 105 Dcaf11
-Mir141 2.71262314324362 4.77357067250837 4.34309768158673 0.000658805704226011 0.00429541319155359 -0.576407055554532 835 Mir141
-Clip4 -2.70686636040313 -0.590132795422603 -4.22339289420565 0.000831845216151027 0.00538076227850526 -0.424317219340228 10 Clip4
-Atp2a2 -3.03468731889576 3.9897529348455 -4.22163834350324 0.000834701948549895 0.00538076227850526 -0.712425757555907 394 Atp2a2
-Snord11 1.70196648813426 4.30076703857411 4.20393833047899 0.000864088763598198 0.00553890606328957 -0.81986210274439 399 Snord11
-Mir1a-2 -2.99188005456984 -0.157703843092941 -4.1964183364679 0.00087689254654494 0.0055585244200432 -0.484125725482271 23 Mir1a-2
-Mir1b -2.99188005456984 -0.157703843092941 -4.1964183364679 0.00087689254654494 0.0055585244200432 -0.484125725482271 23 Mir1b
-Snord95 0.986915429703335 7.67764085008967 4.16122119437911 0.000939451338082392 0.00592217666713818 -1.23233286437982 3258 Snord95
-Tardbp 2.97062100907675 0.883541928525332 4.15354257136734 0.000953695266999763 0.00597893571234467 -0.601444869463529 52 Tardbp
-Mir34c -4.34256582352703 3.19074386781529 -4.14603488500754 0.000967835650645262 0.00601077590779499 -0.705590893704782 715 Mir34c
-Nagpa 2.44212396887249 0.350172381597785 4.14525853315587 0.000969310049986221 0.00601077590779499 -0.597611598821245 24 Nagpa
-Bmp1 2.83284622628297 0.517967853857585 4.09387916064743 0.00107217035218767 0.00661268309106014 -0.708641495529353 39 Bmp1
-Crem 2.33712898304139 -0.121515515943567 4.0829392931282 0.00109547464985413 0.00672008911550302 -0.694023102630085 16 Crem
-AI506816 2.42270659752045 -0.452690836228738 4.06592993902701 0.00113274010846169 0.00690883244123217 -0.71823549330855 12 AI506816
-Snhg12 1.2392736392255 8.22309194102909 4.06341770887408 0.0011383527598174 0.00690883244123217 -1.46153826275546 5403 Snhg12
-Snord99 1.60658132000619 7.61494864267921 4.05085172286681 0.00116685579559478 0.00702317443883207 -1.44229619547632 3970 Snord99
-Mir450b -1.85261764183761 3.54483087111489 -4.0485135276699 0.00117223928473074 0.00702317443883207 -1.03659851317493 205 Mir450b
-Mir218-1 -2.37943795492075 -0.788253108012747 -4.04703416313971 0.00117565847310861 0.00702317443883207 -0.747038393026922 7 Mir218-1
-Mir140 -0.901201558594089 9.41159056411459 -4.03552071597731 0.00120261909580773 0.00711569212542235 -1.59661829698077 10795 Mir140
-Mir483 -2.42347249247516 -0.756810762138252 -4.03017784461274 0.0012153437165189 0.00711569212542235 -0.779102255351839 7 Mir483
-Sqrdl 3.73159563362893 0.945260485192632 4.02973478085716 0.00121640506624817 0.00711569212542235 -0.861776345505721 102 Sqrdl
-Mir144 -2.29129119700542 9.41554506116587 -4.02892270273821 0.00121835283652175 0.00711569212542235 -1.60506726133582 13709 Mir144
-Mir210 -1.50896749399836 4.99944311707418 -4.02726966499444 0.00122232748166764 0.00711569212542235 -1.27568646998696 592 Mir210
-Mir136 -1.91584100290298 5.18425364003902 -4.01919516322722 0.00124193308478254 0.0071567962107923 -1.30273093425232 753 Mir136
-Mir3071 -1.91584100290298 5.18425364003902 -4.01919516322722 0.00124193308478254 0.0071567962107923 -1.30273093425232 753 Mir3071
-Snord43 1.12653255459757 7.42275234629614 4.00820447995329 0.00126913582767258 0.00727680391645436 -1.51733899954002 2975 Snord43
-Nlrp5-ps 3.06966395518949 -0.135132312387713 3.98319245863032 0.00133332885542151 0.00760664112017971 -0.902428549559341 34 Nlrp5-ps
-4833418N02Rik 1.82386047796749 3.16360132579728 3.94914311648112 0.00142607040510993 0.00809525538423099 -1.16130756295351 170 4833418N02Rik
-Pknox1 2.58217103686749 -0.386376496641391 3.94009175499237 0.00145181139000837 0.00820057819801758 -0.95836656931183 16 Pknox1
-Mir1843 1.0607275776375 7.37281183848222 3.92128643575477 0.00150681377235572 0.008458947103908 -1.6871582740604 2782 Mir1843
-Scarna3b 1.05890367361984 7.37450114126396 3.91942250502631 0.00151237967501948 0.008458947103908 -1.69099763322655 2784 Scarna3b
-Phyhd1 2.69871613662387 -0.324381809808589 3.91199503566496 0.00153476742516205 0.00850676625406398 -1.01680363882686 20 Phyhd1
-Gm14207 -2.37304409257741 -0.416502509079365 -3.91164184680055 0.00153584035787658 0.00850676625406398 -1.00193629125355 11 Gm14207
-2700038G22Rik -1.20941383309973 5.69714561045198 -3.89423392377302 0.00158967928624185 0.00876243509952633 -1.61494260853442 872 2700038G22Rik
-Mir1249 -1.57997335358757 3.92571996538164 -3.86749708921129 0.00167613304205796 0.00914790116608117 -1.45071018307216 240 Mir1249
-Mir680-2 2.69993600843854 2.33940488575521 3.86630244603638 0.00168010559076576 0.00914790116608117 -1.19260507987069 134 Mir680-2
-4732471J01Rik 2.47123788102083 1.83426864599497 3.86203852417355 0.00169436257731633 0.00914790116608117 -1.16621943210526 78 4732471J01Rik
-0610005C13Rik 3.75552246080227 1.36486301235638 3.86197876879019 0.00169456324819645 0.00914790116608117 -1.18181214765895 126 0610005C13Rik
-Mir297a-3 -2.83038541581836 0.620898493219045 -3.86045228910567 0.00169969767502998 0.00914790116608117 -1.12583690632738 32 Mir297a-3
-D830015G02Rik -2.85288965105576 -0.0430116131169372 -3.8540007067199 0.00172157316996324 0.00918761905215916 -1.135758525707 19 D830015G02Rik
-Mir190b -2.58480150088673 0.118920372323834 -3.85352956525721 0.00172318183800356 0.00918761905215916 -1.12342997930169 19 Mir190b
-Cacnb2 -2.36615720731133 -0.788253108012747 -3.84657108578939 0.00174711947070295 0.00927192240033519 -1.12169301350773 7 Cacnb2
-Mtfr1 2.77427419358368 0.492589466798896 3.83997888411189 0.001770108543009 0.00935043447950588 -1.18729669638225 40 Mtfr1
-Snord1a 1.56162899910724 3.64400301591315 3.83681604346118 0.0017812471515648 0.00936313497745819 -1.45598973323054 230 Snord1a
-Snord68 0.957663081634941 8.79334935483305 3.83464756418373 0.00178892500007527 0.00936313497745819 -1.95644313626433 7303 Snord68
-Mir878 2.41936085459412 -0.447944854953861 3.82652263259005 0.00181799260036803 0.00947182446127819 -1.16702401112308 13 Mir878
-Mir511 1.70981318188926 3.27929603694437 3.81643804724114 0.0018547387918105 0.00959956329857923 -1.44128807747474 183 Mir511
-Gm15787 2.48153800186339 -0.386376496641391 3.81519042194731 0.00185933697544786 0.00959956329857923 -1.19313192146596 14 Gm15787
-Surf1 2.36126838851735 0.0872159088448913 3.80305260835126 0.00190467958178741 0.00978936667936682 -1.23097217655323 20 Surf1
-Mir1968 2.37800084613411 0.673754504632647 3.77926083620018 0.00199683807660974 0.0102052996591412 -1.28734965758831 33 Mir1968
-0610007N19Rik -1.90120438734532 2.49555567542219 -3.77758577340756 0.00200349441161053 0.0102052996591412 -1.41487533930946 104 0610007N19Rik
-Snhg8 1.59039445480745 3.20715500905903 3.75615085858512 0.00209068421652196 0.0106020919602291 -1.55245580151111 164 Snhg8
-Mir99b -1.91682795135645 10.9172256229833 -3.75211079306552 0.0021075435523792 0.0106402973153304 -2.25375326353787 35086 Mir99b
-Mir365-2 2.40700496454038 0.263026808334256 3.74756102414217 0.00212669484901157 0.0106896864437102 -1.33894003797924 25 Mir365-2
-A630019I02Rik -2.46429396746277 -0.331334129436178 -3.72894212518103 0.00220692150206125 0.0110442869905785 -1.34913426897275 12 A630019I02Rik
-Snora24 1.55151202645698 3.18622291582758 3.72443395692917 0.00222680324291416 0.011095120088057 -1.61270421930364 160 Snora24
-Tmem205 3.35434252485109 1.34402776298411 3.71826658220279 0.00225429637910924 0.0111803962803989 -1.43852442151233 106 Tmem205
-Chka 2.66265038819564 -0.367431606769972 3.71621547263374 0.00226351581136911 0.0111803962803989 -1.38147433178837 20 Chka
-Il15ra 3.0322333836799 1.34537734368953 3.69802409752219 0.00234697158113459 0.0115426490261835 -1.46743653610507 78 Il15ra
-Mir340 1.08524047523296 8.40150339094243 3.68614126686871 0.00240316001921397 0.0117592747718197 -2.22640527546981 5906 Mir340
-Mir222 -0.989531454809674 6.83748363675873 -3.68437434098812 0.00241163040894463 0.0117592747718197 -2.12318215364121 1840 Mir222
-Snord16a 2.29129601947442 3.76378890459482 3.66271871458069 0.0025179297139219 0.0122253523556804 -1.78739319047154 368 Snord16a
-Snora16a 1.52372874357926 4.55536943029929 3.65510898252504 0.0025563971250754 0.0123595301682671 -1.93830245300744 464 Snora16a
-Meg3 -2.68467060880573 -0.63693223477029 -3.65193847372806 0.00257259886012651 0.0123853810101449 -1.49159048882037 12 Meg3
-Mir503 -1.62803161355467 2.50957996141068 -3.64484640281096 0.00260921685489431 0.0125088925690521 -1.68081269699905 88 Mir503
-Snord34 1.9527050627559 2.43578559807808 3.64115899694926 0.00262846334208935 0.0125484379636985 -1.64754683241552 110 Snord34
-Mir330 -1.20046349365495 3.89404790732931 -3.62347773804946 0.00272276191759244 0.0129444639498874 -1.93549975651123 231 Mir330
-Snord123 -1.85009039423829 2.46689582455698 -3.62068933774574 0.00273794187669866 0.012962621084287 -1.71578244093404 102 Snord123
-1700123M08Rik -2.53907013725051 -0.265019789848831 -3.61128151512854 0.0027897908425338 0.0131535179807069 -1.57539508080877 14 1700123M08Rik
-U05342 2.83058680402627 0.79675702914225 3.60519476819122 0.00282386325723748 0.0132525688403876 -1.63602002228639 54 U05342
-Mir331 -1.23366463697674 4.50384654608554 -3.60339313514846 0.00283402874413198 0.0132525688403876 -2.05839651689923 359 Mir331
-Snord47 1.75254142711948 3.676071658915 3.56574123782182 0.00305512804060726 0.014228167731971 -1.9866272780716 277 Snord47
-1810026B05Rik 2.40748340219702 -0.486051677644913 3.55958270725964 0.00309291230781102 0.014345581069969 -1.66670102684768 15 1810026B05Rik
-Mir1933 -2.60309478178739 0.220871127749556 -3.55529124527092 0.00311951960536729 0.0144104124280327 -1.68059425943861 26 Mir1933
-Gm9899 -2.07308991765323 -0.941052160679803 -3.54532493149369 0.00318220422627889 0.0146407057346138 -1.68493975204853 5 Gm9899
-Hspa13 2.27524541038784 -0.523818455835255 3.54060461550118 0.00321233452906321 0.0147199746894021 -1.69974419035356 12 Hspa13
-Mir3096b -1.20474634794453 4.70053095823646 -3.5153757202842 0.00337831126227612 0.0153571838655659 -2.25812559332021 435 Mir3096b
-Snord93 -1.20474634794453 4.70053095823646 -3.5153757202842 0.00337831126227612 0.0153571838655659 -2.25812559332021 435 Snord93
-Adhfe1 2.52527478072387 0.179068747865736 3.50530102423767 0.00344697804598443 0.0156071505970962 -1.80634560509756 25 Adhfe1
-Gm10768 3.5358301921593 0.021906952859762 3.48225041539546 0.00360941220951063 0.0162780210713503 -1.87207612241023 59 Gm10768
-Snord85 1.10352244207212 9.7813263715169 3.47953980186612 0.00362901230761682 0.0163019804842157 -2.72788678002978 15092 Snord85
-AF357399 1.79554087095325 2.33898958600026 3.47297259387192 0.00367694357668826 0.0164098488394083 -1.96818697726206 89 AF357399
-Mir551b 2.15397612089142 -0.590132795422603 3.47231349486416 0.00368178904722922 0.0164098488394083 -1.82422890137775 10 Mir551b
-Def8 2.41874321422316 -0.465993593620758 3.46859651584658 0.00370923535603452 0.0164678503550015 -1.83970905317218 16 Def8
-Mir664 -1.01764634401405 5.37432688059702 -3.45211961435443 0.00383339754528852 0.0168755824717367 -2.46240607108039 632 Mir664
-Mir467c 2.31849317866793 0.658275206086465 3.45045370722881 0.00384618107849534 0.0168755824717367 -1.9100187677291 35 Mir467c
-Mir345 -0.912671478268366 6.07047283018279 -3.44931934620133 0.00385491021641726 0.0168755824717367 -2.53238717399997 1042 Mir345
-Tysnd1 2.30243120612363 -0.498012096151827 3.44862877647117 0.0038602340272772 0.0168755824717367 -1.87482817968793 13 Tysnd1
-Szrd1 3.00773623992391 1.76282092941222 3.43919964294803 0.00393366880940514 0.0171175138601232 -1.97326991386 108 Szrd1
-Snord35a 1.64122011441228 2.9111550248254 3.43698444459166 0.00395112336041969 0.0171175138601232 -2.13032503281622 131 Snord35a
-Snora36b -1.01237028448432 5.37669976851797 -3.43578817017266 0.00396058164686462 0.0171175138601232 -2.49502841436006 633 Snora36b
-Mir3471-1 -1.1190522551011 4.8388269488082 -3.42504935436875 0.00404651146785495 0.017401703908276 -2.45454758690256 469 Mir3471-1
-Snord42b 1.04806162755878 6.10341205402338 3.42377413826923 0.00405683894794165 0.017401703908276 -2.57887542149696 1095 Snord42b
-Snord23 2.9296105505117 1.31458313757935 3.40028372003562 0.00425187802628573 0.0181700105917304 -2.02991542506104 83 Snord23
-Wac 2.7504919030552 0.283618002868323 3.39632013594792 0.00428570220488658 0.0182462172230433 -2.02643747960115 36 Wac
-Mir98 -0.933678340542421 7.94963852128455 -3.39430346367777 0.00430301532596754 0.0182518233714831 -2.78058118585178 4140 Mir98
-4930483K19Rik 2.52533407356931 -0.00211602021024845 3.38443072134124 0.00438878944604477 0.0185466991034707 -2.0252331979185 24 4930483K19Rik
-9530036O11Rik -2.18021083734 -0.880373807283523 -3.36944259471363 0.00452229090218708 0.0190403465660349 -2.01615459630653 6 9530036O11Rik
-Airn -3.32728005388875 1.05242623359369 -3.36289553627823 0.00458187540512432 0.0192202935192899 -2.09508526477381 66 Airn
-Mir542 -1.22316159239699 3.81531438686763 -3.32742457590211 0.00491862125207608 0.0205573144638052 -2.50522353523098 225 Mir542
-Mir350 -1.56832295120394 3.2654986223895 -3.31591379494715 0.00503313311490562 0.0209591419128004 -2.43484812644587 172 Mir350
-Mir467d -2.52245592103549 0.453062661337275 -3.31293337335217 0.00506321480472689 0.0210077385170668 -2.14396740548906 27 Mir467d
-Gm10069 5.68607477678649 3.08099524867498 3.3046846231052 0.00514741011835455 0.0212796918298643 -2.27892670543982 1309 Gm10069
-Wwp1 3.00070653341197 1.74135246228108 3.28733760371041 0.00532906211683886 0.0219415999009116 -2.26148023738523 118 Wwp1
-Mir431 -2.52814898361935 0.729842447535775 -3.28575204794379 0.0053459813956647 0.0219415999009116 -2.20212311657876 36 Mir431
-1810058I24Rik 2.62271409770273 0.785774819657178 3.27879786751028 0.00542082417887067 0.0221690336490732 -2.25054020283081 50 1810058I24Rik
-Mir1950 2.90261468429164 1.12507136246027 3.27585207867393 0.00545284200159248 0.0222203311564894 -2.2663579061757 78 Mir1950
-1700045H11Rik 2.17220411664475 -0.157703843092941 3.2269553992009 0.00601270540485873 0.0244145795976648 -2.30225973272088 15 1700045H11Rik
-Mir3098 1.50327989079112 3.77759040172564 3.22488371497116 0.00603765136079478 0.0244289368888895 -2.67812879077923 259 Mir3098
-Mir92b -1.33550563727296 3.82392790661174 -3.21643129376509 0.00614050279704137 0.0247572921958452 -2.71829841094789 237 Mir92b
-Gm16157 2.66162389621631 -0.365224948706732 3.20356821793981 0.00630038071552899 0.0253124450578119 -2.34859094591427 22 Gm16157
-Snord19 0.841113010089355 7.11055248976838 3.19415039125178 0.00642005717801694 0.0257027552284819 -3.11414489267883 2203 Snord19
-Schip1 -2.57567954952992 -0.153384190338395 -3.18549465102036 0.00653204236936578 0.0260045455633494 -2.38778174828683 17 Schip1
-Snord69 0.84304704580235 7.14897332827513 3.18307678347552 0.00656366958087888 0.0260045455633494 -3.13872359988574 2301 Snord69
-Mir3061 -1.52813229940924 2.87430787227175 -3.18306594661466 0.00656381167593746 0.0260045455633494 -2.63327753238114 119 Mir3061
-Mir29a -0.877942320051101 11.0487374837586 -3.17676979444805 0.00664688724206556 0.0262425548207502 -3.41112827127731 33081 Mir29a
-Gm10319 2.14644292502742 -0.590132795422603 3.17164218489659 0.00671531580422408 0.0264212942504127 -2.38832170685348 12 Gm10319
-Mir127 -1.25650791022161 9.78648771687729 -3.16887488380797 0.00675253616433696 0.0264764390498573 -3.34593460449095 14429 Mir127
-B330016D10Rik -1.92161264416092 -0.63693223477029 -3.1657281651115 0.0067951088367248 0.0264822665438203 -2.39563418410943 8 B330016D10Rik
-Eci2 3.49526347553937 0.0311983516108461 3.16533536523053 0.00680044180310197 0.0264822665438203 -2.47536158350563 69 Eci2
-Mir128-2 -2.89379537629014 0.203236815749758 -3.14346309940017 0.00710405107482255 0.0275704839332399 -2.47229052342811 35 Mir128-2
-Snora65 1.80564358716833 2.25630817287283 3.13994836128033 0.00715407873897124 0.0276705214954786 -2.59842313949207 83 Snora65
-Snord38a 1.14948303605283 3.92210478649851 3.12106491021558 0.00742890451562957 0.0286364190957207 -2.90862714087175 255 Snord38a
-Snord49b 1.06413907223879 6.40649794888962 3.10982427775322 0.0075974432295226 0.0291874839221727 -3.22360916919111 1485 Snord49b
-G630025P09Rik 2.04699188377197 -0.244188556172649 3.10780445430196 0.00762812710513572 0.0292070235804022 -2.51605087870259 15 G630025P09Rik
-Mir329 -2.25038749201629 0.143148280966294 -3.10219089596341 0.00771405119681339 0.0294372321590772 -2.52468319230879 18 Mir329
-Gm5105 -2.16408947287434 -0.894252721332116 -3.09357723434137 0.00784776462691287 0.029847664797692 -2.53204083131101 7 Gm5105
-1700001L05Rik 2.36321176153954 -0.504303555595595 3.08655241783997 0.00795851133538617 0.0301683104108825 -2.55344737484833 16 1700001L05Rik
-Snord2 0.691526499495304 8.00175923757187 3.08142494474571 0.008040321980135 0.030265949526277 -3.40026204758547 3954 Snord2
-Mir22 -0.847615802202714 16.7326675324719 -3.08005897908952 0.00806225653232276 0.030265949526277 -3.96615097802407 1751447 Mir22
-Mir22hg -0.847524583315551 16.7327250619969 -3.07996011844832 0.00806384632426661 0.030265949526277 -3.96634849509949 1751491 Mir22hg
-1700012B15Rik 2.2557460290944 -0.13987829366259 3.07437268195085 0.00815420485488848 0.0305047466866484 -2.59032088872728 19 1700012B15Rik
-Mir185 -1.40702024721662 4.08694622913669 -3.05877067430607 0.008411855287644 0.0313657741281105 -3.06664608794292 331 Mir185
-Slc25a44 2.21491041672761 1.66497498687079 3.04421973608031 0.00865939699909311 0.032183622071548 -2.71149512021232 77 Slc25a44
-Mir495 -1.8776791373757 -0.650811148818883 -3.04203753845606 0.00869713645483206 0.0322189373213097 -2.62552265945633 7 Mir495
-Sec16b 3.05043595272399 0.157027195014887 3.02828873074633 0.00893867714364734 0.0330065715886784 -2.71905679017603 57 Sec16b
-Mir152 -0.718432101776587 7.28616446583531 -3.01300789436766 0.00921491113521454 0.0339168180815477 -3.48441058966127 2398 Mir152
-Snora3 2.07140605143005 1.76186432056615 3.0107219189642 0.00925695325975535 0.0339620053677841 -2.78114890188917 69 Snora3
-2010003O02Rik 1.94956844186534 -0.0201000379109987 2.97528778647613 0.00993335310087066 0.0362443709129751 -2.76683258555442 17 2010003O02Rik
-Mir704 1.80973957230357 -0.756810762138252 2.9728569191809 0.00998150161417436 0.0362443709129751 -2.75225460174575 7 Mir704
-D130020L05Rik 2.51176492481985 1.19972413900365 2.97271570851407 0.00998430564726682 0.0362443709129751 -2.82735067383733 52 D130020L05Rik
-Mir3076 -2.06400546664394 -0.027699510367659 -2.97161874120075 0.0100061146692262 0.0362443709129751 -2.75226107651724 17 Mir3076
-Mirlet7c-1 -0.837889959835657 5.12475158025001 -2.96511158812865 0.0101364526370322 0.0366002925913093 -3.39152169935695 536 Mirlet7c-1
-Mir540 -2.19546334412823 0.490670971257216 -2.96107695486126 0.0102181042879641 0.0367787286831769 -2.78918578498352 25 Mir540
-Mir1947 -1.28776936588478 3.27191581050928 -2.95683139992983 0.0103047236916254 0.0369738670822157 -3.13442994008256 146 Mir1947
-9130019P16Rik 2.19950155178161 0.0491090861538386 2.93627487051494 0.0107344511680762 0.0383950118582288 -2.85952778968786 20 9130019P16Rik
-Mir5121 1.92484055344077 0.963995516493567 2.91681375354519 0.0111574945019998 0.0397834413336931 -2.90528656811773 37 Mir5121
-B430319G15Rik -1.98479980231837 -0.986373420602892 -2.90027155266244 0.0115299314828684 0.0408786538511516 -2.88966321680022 6 B430319G15Rik
-Mir351 -0.833417329407842 8.58289887759314 -2.89999295816495 0.0115363072217974 0.0408786538511516 -3.79447142137588 5692 Mir351
-D330050I16Rik 1.78527438588565 -0.392012482832458 2.89505348884379 0.0116499250396066 0.0411534503721088 -2.89805092182303 11 D330050I16Rik
-BC024386 2.76807972012068 -0.350592172752806 2.88853915590151 0.0118014481853742 0.0415600382083702 -2.93769383343029 35 BC024386
-Mir666 -2.07579086945099 -0.498012096151827 -2.87668024285998 0.0120822641583993 0.0424180412453341 -2.935960499869 9 Mir666
-Mir19a 1.09579604803789 3.73141492889975 2.86437745877971 0.0123805124227085 0.0433317934794797 -3.37709843179263 223 Mir19a
-Numb 1.68732685590953 2.04652538144382 2.86121813573409 0.0124582585716259 0.0434705597254591 -3.09454193475081 80 Numb
-Mir743b 1.75236219547595 -0.788253108012747 2.85924586889851 0.0125070353152586 0.043507705166799 -2.96109586080316 7 Mir743b
-Mir466f-3 2.69172899990669 1.87893214035262 2.85764483454932 0.012546768496086 0.0435132609545109 -3.07809643101419 134 Mir466f-3
-Snora64 2.4307644292688 0.761833001151837 2.85484959589604 0.0126164349935154 0.0435532556947262 -3.03394915069077 47 Snora64
-Trmt61b 2.31260437934785 -0.537538901613448 2.85283128922496 0.0126669731509781 0.0435532556947262 -2.98304494636545 18 Trmt61b
-C130080G10Rik -1.86190650840199 -1.04705177399917 -2.85259853175366 0.0126728141022341 0.0435532556947262 -2.97869388313859 5 C130080G10Rik
-Mir146 -0.747535639173072 9.8698371568429 -2.82836188364647 0.0132956711142425 0.045554137729091 -4.01615829841473 13917 Mir146
-Mir449a -1.79604146328396 -1.07849411987367 -2.8268741085019 0.0133348659084281 0.045554137729091 -3.02729704133418 5 Mir449a
-Ncaph2 2.43172128495717 0.531053368370468 2.81514840260429 0.0136477529969634 0.0464838393120456 -3.10990472720523 39 Ncaph2
-Tmem41a 2.13366400352273 -0.61462282166951 2.81019216927593 0.0137821511685655 0.0468018883432536 -3.05559526679725 14 Tmem41a
-Mir337 -2.00512882554678 1.46245475734951 -2.790176090596 0.0143381997019222 0.0484912300051582 -3.15685281038144 50 Mir337
-E430016F16Rik -1.97871005920294 -0.986373420602892 -2.78924386549867 0.0143646237876805 0.0484912300051582 -3.09307014868296 6 E430016F16Rik
-1700003F17Rik -2.01422348895548 0.00986412853889808 -2.78534021594328 0.0144757903878217 0.0487223505383617 -3.09728477834654 16 1700003F17Rik
-5730522E02Rik 1.77943144260577 -0.402623595030772 2.78153548351825 0.0145849474469889 0.0489453677559245 -3.10514832323792 12 5730522E02Rik
-Snord32a 0.731701165103898 7.36041411624865 2.77936808794083 0.0146474880967064 0.0490110965347272 -3.93874361373315 2646 Snord32a
-Ccl25 1.82691173511948 -0.742931848089659 2.76634551467819 0.0150287990280197 0.0501399406168728 -3.13119236947949 8 Ccl25
-Bc1 1.4447966027473 5.60396756501899 2.76417137258444 0.015093394998458 0.0502086405050747 -3.80973281446833 1034 Bc1
-Mir92-2 0.841738777296982 7.67150490176917 2.75570725400377 0.015347458592434 0.0509053786452535 -4.00630959541651 3238 Mir92-2
-Gm16023 2.83755782890821 0.231660734523689 2.74997768567304 0.0155217992534112 0.051334414342441 -3.23123254571433 61 Gm16023
-Mir463 1.7496368661484 -0.788253108012747 2.74746508869923 0.0155988599062727 0.051440170962593 -3.16503205634054 7 Mir463
-1810008I18Rik 2.42034344843247 -0.486051677644913 2.74392263242908 0.0157081389909388 0.0516512581805798 -3.18685172400794 25 1810008I18Rik
-Gm16119 2.15928464558089 0.141491903029062 2.7402336372813 0.0158227303686605 0.0517925809899256 -3.22270297555294 24 Gm16119
-2010308F09Rik -1.83277349898908 -0.650811148818883 -2.73961897562678 0.0158419025113795 0.0517925809899256 -3.18111223859539 7 2010308F09Rik
-Gm8883 2.16409799450603 -0.590132795422603 2.72505563686563 0.0163028203034417 0.0529872269292577 -3.21224705829732 16 Gm8883
-Zfp862 2.16409799450603 -0.590132795422603 2.72505563686563 0.0163028203034417 0.0529872269292577 -3.21224705829732 16 Zfp862
-Snhg7 1.72599658448324 2.92713305382255 2.72369233450925 0.0163466291666071 0.0529872269292577 -3.48946421579912 173 Snhg7
-B830017H08Rik -2.23343112594958 -0.833574367935836 -2.72209538930301 0.016398091528245 0.0530034629850638 -3.21732724703038 8 B830017H08Rik
-1810064F22Rik 2.10429563053184 -0.628239618113655 2.71233407077621 0.0167160942777747 0.0537469782312529 -3.23263196069571 14 1810064F22Rik
-Mir297c -2.59766718982369 -0.523818455835255 -2.71214450340864 0.0167223288975414 0.0537469782312529 -3.25125579861584 16 Mir297c
-Mir3065 -1.15841548117293 4.89782194523564 -2.69932982501886 0.0171490634567944 0.0546270939470388 -3.86797461891443 469 Mir3065
-Mir338 -1.15841548117293 4.89782194523564 -2.69932982501886 0.0171490634567944 0.0546270939470388 -3.86797461891443 469 Mir338
-Snord12 0.862355865323009 7.21183801132978 2.69866680699734 0.017171427527834 0.0546270939470388 -4.08039835847175 2566 Snord12
-Gm16551 1.95751791415313 -0.691386427467094 2.69401162790859 0.0173292489773132 0.0546270939470388 -3.26351851959596 11 Gm16551
-Mir1938 -1.6694250746775 -1.13917247326995 -2.69395153729379 0.0173312953626889 0.0546270939470388 -3.27380411394135 4 Mir1938
-Mir384 -1.6694250746775 -1.13917247326995 -2.69395153729379 0.0173312953626889 0.0546270939470388 -3.27380411394135 4 Mir384
-Sec14l1 -1.6694250746775 -1.13917247326995 -2.69395153729379 0.0173312953626889 0.0546270939470388 -3.27380411394135 4 Sec14l1
-A530013C23Rik 2.10076433042777 -0.628239618113655 2.67776214138051 0.0178912486859939 0.056236679754047 -3.29508901202161 14 A530013C23Rik
-Gm9920 1.6285204207954 -0.848931461409027 2.67099225409632 0.0181305686626977 0.0566766543675016 -3.30261681920118 6 Gm9920
-Mir3096 1.6285204207954 -0.848931461409027 2.67099225409632 0.0181305686626977 0.0566766543675016 -3.30261681920118 6 Mir3096
-Runx2 -2.05940172171601 0.19321552216426 -2.66798439607752 0.0182378909516821 0.0568298554460666 -3.31709929184916 18 Runx2
-Mir1199 -1.80452318263558 -0.286012869513089 -2.66623221676357 0.0183006932250553 0.0568298554460666 -3.30697738722689 11 Mir1199
-2810013P06Rik 1.73280899888147 -0.254570523638594 2.66544441649986 0.0183289980755061 0.0568298554460666 -3.31814833648003 13 2810013P06Rik
-Mir139 -0.71676951546528 5.60987527682552 -2.6551603087927 0.0187024067912338 0.0578304773680157 -4.03578216454232 751 Mir139
-Syce2 2.36455525863438 -0.504303555595595 2.65072370278831 0.0188657609520281 0.0581779276926056 -3.35376683182341 26 Syce2
-Hsf4 1.75853048276747 -0.027699510367659 2.63272367541842 0.0195427890611213 0.060103294659675 -3.38335065718976 17 Hsf4
-9530026P05Rik -2.07695780402641 0.308348068257344 -2.63023447836339 0.0196382434958373 0.0602345049159956 -3.38900744489907 20 9530026P05Rik
-F730035M05Rik 1.78278284441709 0.0460524556882713 2.60073804597223 0.0208042043193282 0.0636396705853981 -3.45006336955945 17 F730035M05Rik
-4931440P22Rik 1.81357503948527 -0.34669122290937 2.59692706678062 0.0209596355730796 0.0639437010397962 -3.44244562957201 12 4931440P22Rik
-Mir300 -1.68375330243594 3.41000156536173 -2.5819475209075 0.0215814969001033 0.0656653012347144 -3.85223959755949 222 Mir300
-Gm9961 1.6141478502722 -0.484133182103234 2.57010065554055 0.0220858578259184 0.0668716722449952 -3.48214581462349 10 Gm9961
-2900060B14Rik -1.19518787351076 3.46457469939205 -2.56923876538494 0.0221229909127292 0.0668716722449952 -3.89704508052604 185 2900060B14Rik
-Mir411 -1.00605950591069 6.99892994877789 -2.56852458872886 0.0221538055290168 0.0668716722449952 -4.310335894974 2196 Mir411
-Mir673 -1.3090170207406 1.82295295242957 -2.56480697753964 0.0223148777778054 0.0671801465553455 -3.62107180274171 51 Mir673
-Gm5088 -1.68701668543175 -1.13917247326995 -2.55941235619776 0.0225506148115993 0.0677111881579862 -3.51525248418991 4 Gm5088
-Tor2a 2.07995668744553 -0.61904848868591 2.55252291882178 0.0228551574897157 0.0684454978891487 -3.51995132920037 16 Tor2a
-Mir1929 -1.69214227634269 -1.13917247326995 -2.5510179798629 0.0229222065165283 0.0684665906684784 -3.53018502209241 4 Mir1929
-Gm12295 -1.69666721026032 -1.13917247326995 -2.54771186173241 0.0230701674123488 0.0687286188446215 -3.53606163444577 4 Gm12295
-Wdr13 -1.72526707110706 -0.147092730894626 -2.53924168587016 0.0234534382441355 0.0696884714493714 -3.52799276824936 12 Wdr13
-St7l 1.62230300798708 0.897522708635819 2.52666370286734 0.0240338880626592 0.0712277046220627 -3.60118587779941 32 St7l
-Snord88c 0.793290174312999 4.47693446317466 2.50505317099491 0.0250634970146661 0.0740866582739222 -4.17079027962479 341 Snord88c
-9330175M20Rik -1.65022439160042 -0.360570136957963 -2.50294066783667 0.0251663831454311 0.0741985611600436 -3.59490203212403 9 9330175M20Rik
-Snora52 1.11047151370588 2.69319347264049 2.50050576985066 0.0252854729408082 0.0742992649502222 -3.88083546486857 105 Snora52
-4933405D12Rik 2.28373557503359 -0.125999379613997 2.49952793100309 0.0253334503629621 0.0742992649502222 -3.64207314883416 26 4933405D12Rik
-Mir188 -1.84047092737597 1.30222680574037 -2.49825793655251 0.0253958924895589 0.0742992649502222 -3.67062190136747 41 Mir188
-Mir205 1.92476770177287 -0.714181147408868 2.49436665703146 0.0255881349007889 0.0746702350941181 -3.61910043615221 13 Mir205
-Mir29b-2 -1.76343390631061 1.19462262736195 -2.491486533954 0.0257313191461785 0.0747071028176607 -3.66952491758492 41 Mir29b-2
-Snord100 0.630343774928686 6.02538660524635 2.49147851197563 0.0257317190248384 0.0747071028176607 -4.3727044437044 1006 Snord100
-Mir103-1 1.66401353804538 -0.178535076769122 2.48869237583317 0.0258709623692558 0.0749123841663655 -3.63209662533681 14 Mir103-1
-Snord67 1.44797500570103 2.44125660341038 2.48744103910754 0.0259337350970328 0.0749123841663655 -3.84438090974652 108 Snord67
-Mir378b -1.87217458287095 -1.04230579272429 -2.48543799390718 0.0260345203956202 0.07501360548334 -3.63953394774132 8 Mir378b
-Stap2 1.82543646576299 0.360783493796099 2.47215410233116 0.0267124555123547 0.0766751025232241 -3.68285167340431 25 Stap2
-Abhd1 1.9251911184693 -0.706743520940286 2.47151360035917 0.0267455659984603 0.0766751025232241 -3.65951891456996 13 Abhd1
-Crebzf 2.18345173240976 1.01056858325673 2.46941691788336 0.0268542277090025 0.0766788467965674 -3.72491986207361 48 Crebzf
-AW495222 3.12693001673928 0.217900170575655 2.46889622052332 0.0268812784562901 0.0766788467965674 -3.7522647303971 101 AW495222
-Lrrc28 2.42525008262091 0.708273211214943 2.46119616740811 0.0272843555867779 0.077634537966368 -3.75212597460025 60 Lrrc28
-Mir3086 -1.56502610075238 0.163979514642475 -2.45070863513763 0.0278426426188866 0.079026008030223 -3.67658416235536 15 Mir3086
-Gm16548 1.56554530187766 -0.880373807283523 2.43719245534725 0.028578244472197 0.0809125978728953 -3.7171315266521 6 Gm16548
-Vsig8 0.720909981822672 5.46827442991139 2.4297652846464 0.0289903098093856 0.081876097753735 -4.42992368125479 711 Vsig8
-Mllt10 1.64313940342435 2.00106077397987 2.42643449288836 0.0291769377903763 0.0821624443172407 -3.88522168534726 76 Mllt10
-Snord37 0.718235154642642 5.26607014192141 2.42421441307507 0.0293019662978149 0.0821624443172407 -4.41840621005442 605 Snord37
-2310044G17Rik 1.83521282323275 0.25478388047673 2.42411236612262 0.0293077255364741 0.0821624443172407 -3.77290246486377 21 2310044G17Rik
-Mir5109 1.91674990639075 5.26141207092908 2.4205606649453 0.0295088463344336 0.0825235138911489 -4.39344655492679 1282 Mir5109
-1700028E10Rik 1.54839823984953 -0.345213043484771 2.41736388881311 0.0296909918731214 0.0828298819736711 -3.7511992998099 11 1700028E10Rik
-Mea1 1.54661886587012 -0.101771470971538 2.4138331460667 0.0298934095831866 0.0831911715473558 -3.76260805956638 13 Mea1
-Snora74a -1.73489546483347 1.01966577101052 -2.40803895916142 0.0302284388032876 0.0839188532227522 -3.80206412811815 36 Snora74a
-Mir191 -0.655767170712639 13.5617906330993 -2.39884764518688 0.0307672305375651 0.0851401619055862 -5.06132700567092 174890 Mir191
-Mir1949 -1.81819327722704 -1.07849411987367 -2.39799614454486 0.0308176046161324 0.0851401619055862 -3.79424293296871 5 Mir1949
-Mir1198 1.58891563084634 1.17557415725746 2.39059542110177 0.0312587378593833 0.086150289607624 -3.8609699445768 43 Mir1198
-Cldn25 1.85104613563129 -0.734239231433024 2.38535835022853 0.0315745192814028 0.0868109072291099 -3.80901008552036 12 Cldn25
-3110045C21Rik 1.65443039841412 0.203826634362574 2.38155453756473 0.0318057752099395 0.0872365132561082 -3.82495974541955 21 3110045C21Rik
-A330009N23Rik -1.65876461460145 -1.13917247326995 -2.36252069958505 0.0329872919163081 0.0902246398210002 -3.86075992930999 6 A330009N23Rik
-4930412C18Rik -1.71539919467515 -1.13917247326995 -2.36022700442918 0.0331324488036802 0.0902246398210002 -3.86472183787187 4 4930412C18Rik
-Gm17769 -1.71539919467515 -1.13917247326995 -2.36022700442918 0.0331324488036802 0.0902246398210002 -3.86472183787187 4 Gm17769
-Fth1 2.86103494155137 3.45595627169968 2.35821583980086 0.033260223411433 0.0903569402677262 -4.19586341531867 625 Fth1
-4833417C18Rik 1.47974694653215 -0.544811535499514 2.35068477635695 0.0337428496416542 0.0914503359646734 -3.86474671238307 9 4833417C18Rik
-Snora61 0.958904821800182 3.29767563160608 2.349125503029 0.0338436003101147 0.0915060378053102 -4.26190631619714 164 Snora61
-Mirlet7f-2 0.650708366569944 9.71888537299185 2.34186730999564 0.0343163384594052 0.0925648751351804 -4.91362837250212 14033 Mirlet7f-2
-Mir484 -0.729527631490827 7.08906245513894 -2.3224356166388 0.0356128817086712 0.095835608560363 -4.76719481541216 2052 Mir484
-A630066F11Rik 1.44515529589515 -0.941052160679803 2.31716732167662 0.0359722924599672 0.0963708221549233 -3.92438209949561 5 A630066F11Rik
-A730017L22Rik 2.05481659238372 -0.239213430165402 2.31696857375682 0.0359859181283499 0.0963708221549233 -3.9446476842384 21 A730017L22Rik
-Ankrd10 1.8458518819756 -0.032400500918623 2.31581421766513 0.0360651543033762 0.0963708221549233 -3.94922969635093 18 Ankrd10
-9330179D12Rik -1.85045093530144 1.28320177813767 -2.31096269706071 0.0363999711565358 0.0970382408635685 -3.9951686511153 40 9330179D12Rik
-Snora62 1.7847261774294 -0.244188556172649 2.29775908931167 0.0373260968205211 0.0992752365319687 -3.96525604386916 17 Snora62
-BC024582 1.59980554588654 -0.452690836228738 2.2959268866433 0.0374563520512198 0.0993899946289343 -3.96118314063755 10 BC024582
-Gm10804 1.52979741848186 -0.355824155683085 2.29375082460336 0.0376116093012649 0.0994728784445405 -3.96360070348265 12 Gm10804
-Mir1195 1.10164801174588 3.09590694872149 2.29304709119496 0.0376619487187042 0.0994728784445405 -4.32472042528613 144 Mir1195
-Gorasp2 1.73210701934952 0.154556788162208 2.28600861467189 0.03816892734941 0.100579090313341 -3.99587343487878 24 Gorasp2
-5730420D15Rik 1.62853621883357 -0.848931461409027 2.27860458389794 0.0387091654979492 0.101767644776867 -3.99077412899541 8 5730420D15Rik
-Mirlet7f-1 -0.614882576643158 5.68980618928649 -2.27248837673306 0.0391608536660756 0.102718469041361 -4.74250560785076 779 Mirlet7f-1
-0610009L18Rik -1.61889807816313 0.265553460945444 -2.26526136567524 0.0397009617671157 0.103777261528111 -3.99536063610116 21 0610009L18Rik
-Snhg3 1.25378785890833 2.38956644178022 2.26464378812804 0.0397474393896485 0.103777261528111 -4.23895965644335 94 Snhg3
-Mir297-2 1.46684984163613 1.40872493183085 2.26345073111919 0.0398373712088629 0.103777261528111 -4.09858373085422 47 Mir297-2
-Etfb 2.40847795385732 0.265851908477543 2.26169079632117 0.0399703828812269 0.103886576007927 -4.07904638296427 53 Etfb
-Mir708 -1.85451172422601 -0.280376883322022 -2.25778324055568 0.0402671991288784 0.104420168650114 -4.0216739515904 16 Mir708
-Rchy1 1.62884124887726 -0.438811922180145 2.25361813300649 0.0405858566094605 0.105007851227652 -4.03354975134699 11 Rchy1
-A730056A06Rik -1.68694694851363 -1.13917247326995 -2.24683042206407 0.0411102355769964 0.105912931059682 -4.05854864097368 6 A730056A06Rik
-4933406I18Rik 1.77699338800155 -0.768738207773087 2.24668779416224 0.0411213220503411 0.105912931059682 -4.04580334564085 11 4933406I18Rik
-Mir134 -1.97599424729025 0.963837048223167 -2.23531953342299 0.0420140490275288 0.107968535901825 -4.10273890592774 40 Mir134
-0610040F04Rik 1.48024531718237 -0.126261497218445 2.21863530367332 0.0433571530862421 0.111169689149219 -4.09406770500723 13 0610040F04Rik
-Hyi 1.7208723887239 -0.798864220211061 2.21727225982332 0.0434686369972673 0.111205638596148 -4.09496822692958 10 Hyi
-Mir19b-2 1.46199574456486 -0.157703843092941 2.21491518136265 0.0436620562951831 0.111450573227749 -4.09725345928943 13 Mir19b-2
-Dnajc5 1.72175747703832 0.127791187493102 2.20641034213855 0.0443666638363991 0.112996346958329 -4.1264696449174 24 Dnajc5
-A330023F24Rik -0.702900153988052 8.59775002327938 -2.19591230206849 0.0452510530552774 0.114819027522333 -5.09936581845105 6103 A330023F24Rik
-Mir5117 -0.936491371721633 3.3130102793186 -2.19552988269139 0.0452835779010078 0.114819027522333 -4.54124266085371 153 Mir5117
-Mir376a -1.47455098239027 -0.835052547360434 -2.1925218271152 0.0455401753877667 0.11521361445109 -4.13790833966528 5 Mir376a
-C530005A16Rik 1.59621643209164 -0.0517042297735718 2.19129548146478 0.0456451756588884 0.115223773068123 -4.14802186280035 15 C530005A16Rik
-Mir29c -0.711325240372844 8.57976498765981 -2.18303555556971 0.0463582979168776 0.116551708876032 -5.12055952980097 6038 Mir29c
-Snora17 1.61038572109377 2.63473165643875 2.18283746936672 0.046375526581699 0.116551708876032 -4.41075432236771 155 Snora17
-Gm12992 1.67719387198237 -0.452690836228738 2.17669534214676 0.04691271219153 0.117642647495683 -4.16199311590905 14 Gm12992
-4933425B07Rik 1.566045114104 -0.880373807283523 2.1731277221669 0.0472273890461801 0.118135825145526 -4.16761720498767 8 4933425B07Rik
-4932412D23Rik -1.44767473084559 -1.24517208658932 -2.17095503836684 0.0474199894098607 0.118135825145526 -4.19574836919915 4 4932412D23Rik
-Smpx -1.44767473084559 -1.24517208658932 -2.17095503836684 0.0474199894098607 0.118135825145526 -4.19574836919915 4 Smpx
-Gm16833 1.43772363562533 0.00422814234783093 2.16359562114833 0.0480778206167906 0.119513710945007 -4.18236836922897 15 Gm16833
-Mir3089 -1.46210970943343 -1.24517208658932 -2.15543507336627 0.0488171825310707 0.120734101973115 -4.22155997764311 4 Mir3089
-Snora7a 1.7230694099937 1.73375263955762 2.15504822558148 0.048852492789084 0.120734101973115 -4.31592015811305 80 Snora7a
-2310015A10Rik 1.51712536676038 -0.90486383353043 2.15439473012054 0.0489121957425213 0.120734101973115 -4.19854386809234 8 2310015A10Rik
-AW112010 1.99789847267928 0.0701015602482627 2.15352220222733 0.0489920150863736 0.120734101973115 -4.22796047652863 34 AW112010
-Pglyrp2 2.13000407982332 -0.625897547790957 2.1382953912996 0.050404600122275 0.123947518835163 -4.23118827095858 27 Pglyrp2
-R74862 1.46156334047426 0.026537555448611 2.13628776933242 0.0505936418662866 0.124144828751469 -4.22999882095606 15 R74862
-Snora28 1.12037820753744 2.12526039705926 2.12930512434667 0.0512562751008916 0.125500879592526 -4.42817337501701 71 Snora28
-Cd40 -1.37088395935442 -1.27661443246381 -2.12752810799839 0.0514261885899383 0.125647283043083 -4.27058401928142 4 Cd40
-Mug-ps1 2.13180518001054 -0.635454055345691 2.12264061264248 0.0518962135703567 0.126524742914053 -4.25630236233275 31 Mug-ps1
-A630072M18Rik 1.38270587147115 0.396971820945472 2.11893446805287 0.0522552789377958 0.127117232913158 -4.26481829202589 20 A630072M18Rik
-9430083A17Rik 1.47463750425962 -0.925695067206612 2.11783696007545 0.0523620503673834 0.127117232913158 -4.25875097666518 7 9430083A17Rik
-Mir1934 -1.57424505068045 -0.635454055345691 -2.11625143263769 0.0525166556449856 0.127221877050804 -4.25830313630768 9 Mir1934
-Snhg4 -1.12748951163344 1.68874582221391 -2.10271220257256 0.0538541790241838 0.130185631920749 -4.40346908432753 47 Snhg4
-Mir669e 1.4372851263053 -0.148570910319225 2.09754754034625 0.0543726361448265 0.131161052518493 -4.29239386401532 13 Mir669e
-9430008C03Rik 1.75693578729127 0.363840124261666 2.09398906309311 0.054732534541466 0.131750679138845 -4.32757583432609 26 9430008C03Rik
-C030037D09Rik 1.44249836924774 -0.941052160679803 2.08964460798292 0.0551749074500188 0.132204324416187 -4.30482301369224 7 C030037D09Rik
-Wdr73 1.44249836924774 -0.941052160679803 2.08964460798292 0.0551749074500188 0.132204324416187 -4.30482301369224 7 Wdr73
-A230108P19Rik 1.49352479961928 0.250614055858426 2.08783829894219 0.0553598038831607 0.132204324416187 -4.31611624705347 21 A230108P19Rik
-B230206H07Rik 1.44241701736279 -0.941052160679803 2.08759786205388 0.0553844584320223 0.132204324416187 -4.3081590960531 7 B230206H07Rik
-Snord55 0.601021636432394 6.97866331241363 2.08546096371218 0.0556040229210925 0.132208091094402 -5.17041448286456 2070 Snord55
-Ralgps2 1.88483656314977 0.227262055965901 2.08532736079326 0.0556177771475135 0.132208091094402 -4.34269584383277 30 Ralgps2
-Mir33 0.994045785258037 2.79490734914157 2.08206634259786 0.055954469010935 0.132731910897041 -4.63235497043256 118 Mir33
-Mir26a-1 -0.807612985022876 4.30478785875254 -2.07928199044436 0.0562434329588863 0.13314057470143 -4.90515725875701 302 Mir26a-1
-Gm16845 1.58909272532801 0.693110936601907 2.07661019420121 0.0565220086427535 0.133523005924186 -4.35651524620671 30 Gm16845
-Gm15417 1.5342975077552 0.98095079124996 2.07236996254055 0.0569667294167582 0.134295533604382 -4.38415298913751 35 Gm15417
-Tmem161b 1.62214843774913 -0.848931461409027 2.06567840236373 0.0576751098770028 0.135602143587659 -4.3444683065412 8 Tmem161b
-0610039K10Rik 1.59784774087558 0.19965680974427 2.0648940719261 0.0577586693984243 0.135602143587659 -4.35652602439924 21 0610039K10Rik
-E230016K23Rik -1.72852657300674 -1.13917247326995 -2.05875394572702 0.0584166748798269 0.136730583937275 -4.37016708474507 6 E230016K23Rik
-2900056M20Rik -1.65506739394547 -0.558690449548107 -2.05452050389929 0.0588743595154887 0.136730583937275 -4.36084200194152 10 2900056M20Rik
-Mir671 0.562605162336286 5.98852427457086 2.05429817680062 0.0588984865622872 0.136730583937275 -5.14108074312137 973 Mir671
-4931408D14Rik 1.96514847475323 -0.696132408741971 2.05392305419837 0.0589392156613288 0.136730583937275 -4.36610698383729 22 4931408D14Rik
-Gm16998 1.69004828050554 0.625421285257375 2.05268667282661 0.0590736396779562 0.136730583937275 -4.40968404758219 28 Gm16998
-Gm16880 1.44362454501385 -0.941052160679803 2.05264516314336 0.0590781576521265 0.136730583937275 -4.36487132437809 7 Gm16880
-Gm20605 1.44362454501385 -0.941052160679803 2.05264516314336 0.0590781576521265 0.136730583937275 -4.36487132437809 7 Gm20605
-Angel2 2.00212254672889 -0.0888847843510248 2.04370859875966 0.0600582524306836 0.13871754255751 -4.40649208108809 28 Angel2
-Mir3082 -0.840503124788145 2.98078155227528 -2.04091866162716 0.0603672767363008 0.139149621729534 -4.74512204880153 112 Mir3082
-4930556M19Rik 1.91670992783053 -0.130687164234845 2.03879415031149 0.0606035740806922 0.139412657310624 -4.40877400780406 23 4930556M19Rik
-Rian -1.1485219400328 2.35394460295566 -2.03597388605946 0.0609185674267399 0.139771726308962 -4.63934157315238 88 Rian
-Mir410 -0.901221750135118 3.70006848443484 -2.03462058748079 0.0610702490918199 0.139771726308962 -4.88099717429878 208 Mir410
-3110039I08Rik -1.63610179345525 -1.18449373319304 -2.03411361106907 0.0611271616373111 0.139771726308962 -4.41449053166305 5 3110039I08Rik
-Jpx 1.4439778868564 -0.386376496641391 2.0256963387538 0.0620792090771524 0.141664755114062 -4.40640628270017 12 Jpx
-Ranbp3 1.65127100064997 0.13253716876798 2.01854426538914 0.0628988113300898 0.143248590274716 -4.43559297253071 21 Ranbp3
-Ano4 -1.60469225892927 -0.386376496641391 -2.01415852435434 0.0634062900341383 0.144116687109466 -4.41831749461231 12 Ano4
-Raver1-fdx1l 1.84484701704264 0.152704788521028 2.00550228504778 0.0644189220532073 0.146127216824472 -4.45962561575273 32 Raver1-fdx1l
-Mir1191 1.82343613876431 0.355147507605031 2.00159544245338 0.064880780262737 0.14678508924003 -4.47205950977787 34 Mir1191
-Snord42a -1.13379631100394 4.75607203025783 -2.00076940150347 0.0649788196577846 0.14678508924003 -5.09261777286222 438 Snord42a
-Elmo1 -1.44814767972568 -0.848931461409027 -1.99979301527205 0.0650948774368582 0.14678508924003 -4.45311869203765 6 Elmo1
-B430010I23Rik 1.34949047728334 -0.986373420602892 1.99444973304055 0.0657333644405924 0.147932482892931 -4.45809589212282 6 B430010I23Rik
-Zfp809 1.61960355427207 -0.452690836228738 1.9814089454698 0.0673157207393185 0.151195349140871 -4.47945908882588 14 Zfp809
-2310050B05Rik -1.59274071576353 -0.590132795422603 -1.97545789269397 0.0680492897692784 0.152490055886233 -4.48612649748884 10 2310050B05Rik
-Gm19705 -1.53197912631465 -1.24517208658932 -1.97349298532553 0.0682930925134662 0.152490055886233 -4.5170833713595 4 Gm19705
-Mir701 -1.53197912631465 -1.24517208658932 -1.97349298532553 0.0682930925134662 0.152490055886233 -4.5170833713595 4 Mir701
-F630028O10Rik -0.622888913014848 5.94290954470824 -1.96287969360653 0.0696237734116029 0.154761005415237 -5.29318401111469 928 F630028O10Rik
-Mir223 -0.622888913014848 5.94290954470824 -1.96287969360653 0.0696237734116029 0.154761005415237 -5.29318401111469 928 Mir223
-Snord71 0.746584913495821 4.40398042673262 1.96214265492746 0.0697170523956459 0.154761005415237 -5.10586352740556 341 Snord71
-Mir3087 -1.55280633805545 -0.590132795422603 -1.94082835991025 0.0724641808981051 0.160546855154831 -4.54065638515475 8 Mir3087
-Gm12718 1.35418552228114 -0.986373420602892 1.93287179314716 0.073514592902694 0.162558431205376 -4.55523156925391 6 Gm12718
-AF357359 -1.68799855890395 1.29585702757533 -1.92491777610303 0.0745784347261457 0.163934632876851 -4.62972173041495 55 AF357359
-Gm10125 -1.45199246964296 -0.848931461409028 -1.92479193749794 0.0745953769075101 0.163934632876851 -4.57142675996109 6 Gm10125
-Tmem179b 1.72738705406917 -0.803788399998572 1.92472040076264 0.0746050097519669 0.163934632876851 -4.56937203477109 16 Tmem179b
-5430405H02Rik 1.78645846006788 -0.165684653346019 1.92319520065518 0.0748106549472968 0.163934632876851 -4.58774074751784 20 5430405H02Rik
-Snora20 1.38262094231094 0.0963488416186067 1.92286428347317 0.0748553406913579 0.163934632876851 -4.56861037921303 18 Snora20
-4930519F09Rik -1.5565120089996 -1.23129317254072 -1.9216903287951 0.0750140617025739 0.163967518012714 -4.59735520927714 5 4930519F09Rik
-Snord15a 1.10276132756029 1.79014108710226 1.91104926615851 0.0764666941361036 0.166823131948937 -4.72655247154268 57 Snord15a
-Dmr 1.68073345913718 -0.8263599307038 1.89430363868892 0.0788041640078884 0.171285514017207 -4.61631543051433 15 Dmr
-A930005H10Rik 1.49847756821754 -0.371019403168199 1.89424576390839 0.0788123530754021 0.171285514017207 -4.61401782584198 14 A930005H10Rik
-C920021L13Rik 1.45659708523928 0.785774819657178 1.89280562125827 0.0790163750358231 0.171402440904704 -4.64971051817534 32 C920021L13Rik
-4931403E22Rik 1.70378545689415 -0.814059467696176 1.88880372983809 0.079585814935806 0.172310085088719 -4.62498282958674 16 4931403E22Rik
-Mir1964 -0.871113074799274 2.86663339631991 -1.88648279477582 0.0799177575555235 0.172701063202372 -4.9744960348716 105 Mir1964
-2410004N09Rik 2.12780696213311 -0.132941404588628 1.87600039224749 0.0814325355366182 0.175611886412351 -4.66535335652261 50 2410004N09Rik
-4930545L23Rik 1.35692949813202 -0.986373420602892 1.87504023129734 0.0815725677463155 0.175611886412351 -4.6448850582387 6 4930545L23Rik
-C330022C24Rik 1.66684006383984 -0.832108206363072 1.87245175628895 0.0819511559395892 0.176094668412564 -4.64990032998496 15 C330022C24Rik
-Gm7854 1.41521331892746 0.409161384184755 1.87132675965834 0.0821161885893659 0.176117615000877 -4.66097795086114 23 Gm7854
-Zfp410 1.71265563446791 -0.233577443974335 1.86771686993171 0.0826477630092813 0.176925136198105 -4.66576692182148 20 Zfp410
-Srsf3 1.22390265356443 1.85404652627685 1.85691167526583 0.0842573902310767 0.180033112834567 -4.81976844441289 57 Srsf3
-Mir466n 1.94888590100719 1.13742198871721 1.85224203398279 0.084961673426306 0.181198634354047 -4.7515811957887 64 Mir466n
-Ldha 1.23623349077625 1.31382141784026 1.85067176230469 0.0851996867355077 0.181367243591818 -4.75855841349533 43 Ldha
-Jmjd4 1.44086756566094 -0.101771470971538 1.84911253075739 0.0854366173626727 0.181532924414915 -4.69022441726304 15 Jmjd4
-Snord90 1.29002743641748 2.8519744150179 1.84711128368238 0.0857415782389845 0.181842269090486 -5.00704775229682 171 Snord90
-Apol7d 1.22452963991045 -1.04705177399917 1.84402849240442 0.0862132574777033 0.182165419966777 -4.69431475678792 5 Apol7d
-Gm13944 1.22452963991045 -1.04705177399917 1.84402849240442 0.0862132574777033 0.182165419966777 -4.69431475678792 5 Gm13944
-Snora68 0.821345299486193 3.6276738274756 1.84196855216361 0.0865297291862233 0.182496157119188 -5.16790668162727 213 Snora68
-Mir3470a 1.39115943125415 1.51311326753652 1.83385231031511 0.0877867742768492 0.184805736992408 -4.80714219046788 61 Mir3470a
-1700042O10Rik 1.25969390520503 -1.03317285995058 1.82371980602793 0.0893789810710051 0.186983832297381 -4.72463210359103 6 1700042O10Rik
-Cox18 1.25969390520503 -1.03317285995058 1.82371980602793 0.0893789810710051 0.186983832297381 -4.72463210359103 6 Cox18
-2010310C07Rik 1.30127564765566 -0.600743907620917 1.82236178655336 0.0895943251318701 0.186983832297381 -4.72220804437159 9 2010310C07Rik
-9530080O11Rik 1.2333343214217 -1.04705177399917 1.82206906601016 0.0896408030382712 0.186983832297381 -4.72761567183742 5 9530080O11Rik
-Gm10658 1.2333343214217 -1.04705177399917 1.82206906601016 0.0896408030382712 0.186983832297381 -4.72761567183742 5 Gm10658
-AV039307 1.68466781700848 -0.822165860739921 1.8179655824626 0.0902946176139629 0.188003939229072 -4.7329903325485 18 AV039307
-Mir653 1.31080939375484 -0.0354571313841903 1.81352557566678 0.0910068355861608 0.18914171111805 -4.73339615516883 15 Mir653
-Snord15b 0.765111056122759 3.75912830759914 1.811253812561 0.0913731790974714 0.189557813364027 -5.24290697168161 219 Snord15b
-A330032B11Rik 1.15351830091647 -0.544811535499514 1.805581783419 0.092293585640648 0.191024884842792 -4.74543310731249 9 A330032B11Rik
-Gpr137b-ps -1.34164266279755 -0.941052160679803 -1.80483613693327 0.0924151940694311 0.191024884842792 -4.76257477080841 5 Gpr137b-ps
-Gm3230 1.32839510964763 -0.996984532801206 1.80296443093399 0.0927210811440096 0.191159424553245 -4.75462931995263 7 Gm3230
-BC090627 -1.21125462055415 1.58389205620882 -1.80195893201754 0.0928857782098881 0.191159424553245 -4.85973163462932 47 BC090627
-Mir1981 0.697255970236885 4.21228670526814 1.80136677676051 0.0929828927493876 0.191159424553245 -5.33355766780014 295 Mir1981
-2700069I18Rik 1.2258276117016 -1.04705177399917 1.79737646930347 0.0936396672658505 0.192163417896287 -4.7647729602822 5 2700069I18Rik
-1700018L02Rik 1.60638305633868 -0.05968504002665 1.79496471819782 0.0940386190778224 0.192635663137873 -4.77706326738907 20 1700018L02Rik
-Rnu12 1.34545573987153 3.12465170168855 1.79074555187797 0.0947401853209974 0.193675928813183 -5.15435248901701 212 Rnu12
-Aes 1.97580787988901 1.50102830623892 1.7898725456979 0.0948859283142588 0.193675928813183 -4.87690265891261 113 Aes
-AW011738 1.35994322320792 -0.986373420602892 1.78331122652731 0.0959876815075987 0.195574901071732 -4.78377188602086 6 AW011738
-Mir1247 0.717962491463309 4.29587920045115 1.77899645447695 0.09671837092938 0.196712408610379 -5.37990996340849 300 Mir1247
-Snora26 1.32536884557828 -0.188256184051246 1.77664788038335 0.0971181605178584 0.197174058987325 -4.79082437782362 13 Snora26
-C130046K22Rik -1.66206124112149 -0.401145415606174 -1.77343531333303 0.0976673947466025 0.197936940330148 -4.79605188690242 13 C130046K22Rik
-4930546K05Rik 1.23872623697392 -1.04705177399917 1.76682617714789 0.0988059745301037 0.199889391735547 -4.81031354370822 5 4930546K05Rik
-Mir199a-1 1.28133340693594 0.249147894285663 1.75988001617421 0.100015250730246 0.201977701032231 -4.81578597695043 18 Mir199a-1
-Mir434 -0.892989649406754 5.12926720938992 -1.7580843415124 0.100329984081606 0.202255321266984 -5.5313213323858 623 Mir434
-Snord53 0.741893342123238 4.09583299151738 1.75305135186545 0.101216797040749 0.203683184168421 -5.3852498459864 290 Snord53
-Mir466g 1.83795214574926 0.185777895695677 1.74292337320769 0.103022330922592 0.206606620810476 -4.86892478985408 38 Mir466g
-D930015M05Rik 1.30968823250333 0.15849335658765 1.7428712395644 0.103031697845014 0.206606620810476 -4.83950381088453 20 D930015M05Rik
-Mir532 0.395164755537383 7.64371024412024 1.7408125217348 0.103402190719686 0.206985788791511 -5.7782897714965 3010 Mir532
-Mir103-2 0.773766228848679 2.45632927480254 1.73913662142218 0.103704656419595 0.207227693475933 -5.11879080206363 81 Mir103-2
-1810014B01Rik 1.26181707046536 -1.03317285995058 1.73762861899304 0.103977485505656 0.207409634548871 -4.85288674502469 6 1810014B01Rik
-Snora69 1.22315416187213 0.909823171643444 1.73588809106924 0.104293168525467 0.207676274498356 -4.89225702628115 33 Snora69
-Zc3h14 1.41408821776149 0.00675479495901958 1.72847661834252 0.105646860853607 0.21000534535534 -4.86420908405344 19 Zc3h14
-Nkx6-2 -1.27800503999609 -0.941052160679803 -1.7146791107628 0.108208119548433 0.214722546790891 -4.8960301602504 5 Nkx6-2
-Mir26b 0.351712467695003 11.5635032907349 1.7045779906641 0.110117579874109 0.21763806583767 -6.09597193580631 46666 Mir26b
-Mir299 -0.955766682393671 1.55229988219809 -1.70455586992184 0.110121793629752 0.21763806583767 -5.00394219885035 43 Mir299
-Mir3068 -0.644710617273588 4.67886513002661 -1.70302081836154 0.110414548820487 0.21763806583767 -5.55943820497418 431 Mir3068
-4930512B01Rik 1.20898643105347 -0.682253494693378 1.70288569810342 0.110440350674856 0.21763806583767 -4.89782103905022 9 4930512B01Rik
-Fam187b 1.23742378935899 -1.04705177399917 1.69414248393857 0.112121161065231 0.220569387543842 -4.9166784968792 5 Fam187b
-Scarna13 1.31946224597966 -0.590132795422603 1.68885863838395 0.113147737124684 0.221824000101829 -4.91936341824324 10 Scarna13
-Snhg10 1.31946224597966 -0.590132795422603 1.68885863838395 0.113147737124684 0.221824000101829 -4.91936341824324 10 Snhg10
-Gm10791 1.38935319993587 -0.966858520363231 1.68575319044044 0.113754902225617 0.222389287455916 -4.92671603809347 10 Gm10791
-H2-K2 1.16076121091899 -1.07849411987367 1.68539104137817 0.113825892966043 0.222389287455916 -4.93053846380363 5 H2-K2
-Mir676 -0.437089730569779 6.48681209189413 -1.6806647861103 0.114755912374217 0.223823070117918 -5.77991725097014 1363 Mir676
-Rcbtb2 1.34162849838235 0.642696874272247 1.67798906730309 0.115285364113241 0.22447201442527 -4.95274844960655 29 Rcbtb2
-5730422E09Rik 1.18020228563473 -0.696132408741971 1.67428783670958 0.116021244081938 0.224957555323422 -4.93882350178396 8 5730422E09Rik
-Ythdf3 1.18280803863615 1.44825173729247 1.6741256859047 0.116053576278149 0.224957555323422 -5.03651124662328 52 Ythdf3
-C730027H18Rik 1.17258184372084 -1.07849411987367 1.67277419424211 0.116323363401244 0.224957555323422 -4.94864972108029 5 C730027H18Rik
-Gm8615 1.17258184372084 -1.07849411987367 1.67277419424211 0.116323363401244 0.224957555323422 -4.94864972108029 5 Gm8615
-2900009J06Rik 1.34828416289482 -0.986373420602892 1.66877503516158 0.117124882491955 0.226124350124061 -4.9510598544989 10 2900009J06Rik
-Rnf44 2.04490507739992 1.01150037846895 1.66529647991714 0.117825963606828 0.227093622424646 -5.02208296723603 88 Rnf44
-A630010A05Rik -1.25675269332335 0.631280460684989 -1.66260430434796 0.118371056366922 0.227453417799216 -4.9530858854327 24 A630010A05Rik
-Rad51d 1.39060859991726 2.02739737762503 1.66240581191988 0.118411332316156 0.227453417799216 -5.13161638361473 92 Rad51d
-Gm12359 1.48198839903639 0.110062763084683 1.65776269040705 0.119356866775459 0.228884344522352 -4.96622809648743 26 Gm12359
-4933417D19Rik 1.18269745295452 -1.07849411987367 1.65430499284386 0.120065250928896 0.229856461929313 -4.97500052644218 5 4933417D19Rik
-Gm9895 1.21903665624816 -0.63693223477029 1.65194097135226 0.120551668835456 0.230401095713995 -4.97151843176298 8 Gm9895
-1110020A21Rik 1.25194593270892 -0.49237610996076 1.63876864711163 0.123293382787791 0.235247073178712 -4.9892549623361 12 1110020A21Rik
-Alg11 1.32531249978621 -0.590132795422603 1.6361767652414 0.123839170710122 0.235510431606847 -4.99444823996257 12 Alg11
-Vaultrc5 -0.448072317249509 7.10631262637587 -1.63615281653852 0.123844223456712 0.235510431606847 -5.89478683307987 2022 Vaultrc5
-Mir3060 -1.21202833172584 0.27171942499089 -1.6351645637142 0.124052882574934 0.235514707184691 -4.96812309442586 19 Mir3060
-Mir1955 1.13186286307835 -0.682253494693378 1.63345540817796 0.124414470052149 0.235669705476309 -4.9969826223679 7 Mir1955
-Gm14005 -1.44880310133897 0.48022170504698 -1.63282712337373 0.124547618231564 0.235669705476309 -4.99064879469161 26 Gm14005
-C730036E19Rik 1.2943846006491 -1.01217978028632 1.63063554865266 0.125013028232036 0.236158717239657 -5.00596783361666 9 C730036E19Rik
-4930405P13Rik 1.34966504178449 -0.986373420602892 1.62725241064407 0.125734431753086 0.236979623633452 -5.00991537352707 10 4930405P13Rik
-Dancr 1.3062030182448 1.18459288047694 1.62665135682264 0.125862972762377 0.236979623633452 -5.07677615617175 48 Dancr
-Ankrd11 1.37844840409545 1.82869495288249 1.62469304300553 0.126282563660683 0.237377932680131 -5.15746897731049 86 Ankrd11
-2610020C07Rik 1.50920105232855 -0.317940522228579 1.6135231103667 0.128698986652833 0.241522275938952 -5.03116671787619 19 2610020C07Rik
-1600002D24Rik -1.25321204977434 -0.756810762138252 -1.61125552509827 0.12919437339977 0.242053826024856 -5.03110633443407 7 1600002D24Rik
-BC031361 1.03166169729911 -1.13917247326995 1.608779945121 0.129737072495046 0.242672130683356 -5.043580985531 4 BC031361
-5730408K05Rik 1.05171391832391 -1.13917247326995 1.60382914837461 0.130828274941307 0.244312703286467 -5.05048396234822 4 5730408K05Rik
-4833422C13Rik 1.56072686239259 0.473647969476496 1.59330634063312 0.133173818859074 0.248286482546083 -5.0792948158275 34 4833422C13Rik
-Mir15b -0.423479234767332 6.16430836474156 -1.59205186812547 0.133455834392276 0.248406373640436 -5.88344797905857 1064 Mir15b
-Snord17 0.588180610794611 6.40434740068647 1.5909226382288 0.133710132153462 0.248415310064625 -5.90270306066359 1360 Snord17
-2700089E24Rik 1.9346637528719 0.708144926037837 1.59009813142159 0.13389606984202 0.248415310064625 -5.10719912908875 70 2700089E24Rik
-1300002E11Rik 1.66663408255978 -0.437333742755547 1.58582291431296 0.134863747546901 0.249804441478919 -5.0690582710292 28 1300002E11Rik
-4930474G06Rik -1.090892671974 -1.03317285995058 -1.58193904835456 0.135748030192849 0.250441466610603 -5.09374604062072 4 4930474G06Rik
-A430093F15Rik -1.090892671974 -1.03317285995058 -1.58193904835456 0.135748030192849 0.250441466610603 -5.09374604062072 4 A430093F15Rik
-Rreb1 1.35338804346774 2.10846654001091 1.58142192959551 0.135866141833447 0.250441466610603 -5.26419259030567 113 Rreb1
-Mir485 -1.2897278302183 -0.360570136957963 -1.57792310950414 0.136667596032013 0.250873719680857 -5.05792690495308 13 Mir485
-Adam17 1.1761458064096 0.445349711334128 1.57783328945761 0.136688223694767 0.250873719680857 -5.07292679688905 22 Adam17
-Mir154 -1.41177845571614 0.000731195765182737 -1.57751972062112 0.136760257354508 0.250873719680857 -5.05355498603271 18 Mir154
-1700034P13Rik 1.03573302470771 -1.13917247326995 1.5706655582452 0.138342934232158 0.251258367802273 -5.09634899411597 4 1700034P13Rik
-Fam120aos 1.03573302470771 -1.13917247326995 1.5706655582452 0.138342934232158 0.251258367802273 -5.09634899411597 4 Fam120aos
-1700102H20Rik -1.01261850877746 -1.42941348513087 -1.56975595848976 0.138554138577694 0.251258367802273 -5.13526440107113 4 1700102H20Rik
-9230112J17Rik -1.01261850877746 -1.42941348513087 -1.56975595848976 0.138554138577694 0.251258367802273 -5.13526440107113 4 9230112J17Rik
-Mir3100 -1.01261850877746 -1.42941348513087 -1.56975595848976 0.138554138577694 0.251258367802273 -5.13526440107113 4 Mir3100
-Mir294 1.03626141233244 -1.13917247326995 1.56969188750367 0.138569025899642 0.251258367802273 -5.09768561064634 4 Mir294
-Snora70 1.03626141233244 -1.13917247326995 1.56969188750367 0.138569025899642 0.251258367802273 -5.09768561064634 4 Snora70
-Mir129-1 1.05464886354904 -1.13917247326995 1.56899253420323 0.138731614123954 0.251258367802273 -5.09864530153619 4 Mir129-1
-Gm10516 1.05631363335724 -1.13917247326995 1.56670193467872 0.139265281483992 0.251825176185792 -5.1017865162441 4 Gm10516
-4930451G09Rik 1.06510899754063 -1.13917247326995 1.56184533087519 0.140402574895956 0.252848126899102 -5.10843610513404 4 4930451G09Rik
-4933421O10Rik 1.06510899754063 -1.13917247326995 1.56184533087519 0.140402574895956 0.252848126899102 -5.10843610513404 4 4933421O10Rik
-St5 1.16930236967868 0.570831252021079 1.5614487016406 0.140495804078905 0.252848126899102 -5.1040121162741 24 St5
-Snhg6 0.414987169877994 6.88812749706196 1.55780210312341 0.141355425161323 0.25372730599006 -5.98952812049796 1762 Snhg6
-Senp2 1.23316924476294 -1.04230579272429 1.55749058186328 0.141429068018999 0.25372730599006 -5.10845162064594 8 Senp2
-Mir3069 1.1967490330554 -0.650811148818883 1.55602233545589 0.141776597800618 0.25395148836814 -5.10475733476948 9 Mir3069
-Snord87 0.414265796353463 6.8857147404585 1.55208332473347 0.142712543117168 0.255227291060641 -5.99741848701943 1759 Snord87
-4932702P03Rik 1.50538536018542 -0.190947829244951 1.54735549642484 0.143842852742846 0.256846158027523 -5.12545513466049 20 4932702P03Rik
-Mir341 -1.11910417431075 -0.268449437687187 -1.54504024071338 0.144399143660684 0.257436598307563 -5.09444510471904 10 Mir341
-Fam19a2 -1.08108870526458 -1.03317285995058 -1.54274205574173 0.144953138847169 0.258021109866802 -5.14743110946704 4 Fam19a2
-Mir2137 -1.25397648150412 -0.986373420602892 -1.53902949676667 0.145851890715621 0.259216522284305 -5.1478345461744 6 Mir2137
-D130009I18Rik 1.27231702999427 -0.381630515366513 1.53514141676594 0.146798196085364 0.260339335086546 -5.13021329550442 15 D130009I18Rik
-Elp3 -1.44496494213962 1.49755589579473 -1.53456064882656 0.146939992809584 0.260339335086546 -5.2298474338907 55 Elp3
-Six3os1 -1.3837215389721 -1.31472125515486 -1.53340154891498 0.147223338498394 0.260436944537469 -5.17353312572401 8 Six3os1
-Rmst -1.34494122456533 -0.508623208350141 -1.52875491880875 0.148363873123417 0.262048265067831 -5.13210633012727 10 Rmst
-4930564K09Rik 1.15715309457904 -1.07849411987367 1.51860435848876 0.150881394880579 0.266082954495736 -5.16248906856691 7 4930564K09Rik
-Gm16793 1.16848451363027 -1.0728581336826 1.51349594367936 0.152161963356188 0.267725701552132 -5.16901059939246 8 Gm16793
-Mir200c 1.09203191538954 1.0686845390219 1.51301819802264 0.152282191329828 0.267725701552132 -5.21562223006706 43 Mir200c
-Mir500 -0.959184822315059 1.55556768404836 -1.50996567016574 0.153052273761653 0.268308865049533 -5.27805724838699 47 Mir500
-Brd2 1.15193277255657 1.46278337085446 1.5098394012633 0.153084199077341 0.268308865049533 -5.26772609337448 52 Brd2
-1700061I17Rik -0.993032112528657 -1.07849411987367 -1.5078450002038 0.153589200235581 0.268618908035033 -5.19885089576796 5 1700061I17Rik
-2010009K17Rik 1.39848757206625 0.0129207590044654 1.50658142705804 0.153909874663779 0.268618908035033 -5.1753515727655 21 2010009K17Rik
-4930549G23Rik 1.15784945023494 -1.07849411987367 1.50450440196419 0.154438215311991 0.268618908035033 -5.18132752967772 7 4930549G23Rik
-Arfrp1 1.15784945023494 -1.07849411987367 1.50450440196419 0.154438215311991 0.268618908035033 -5.18132752967772 7 Arfrp1
-Gm16675 1.15784945023494 -1.07849411987367 1.50450440196419 0.154438215311991 0.268618908035033 -5.18132752967772 7 Gm16675
-9230116N13Rik 1.06454128715679 -1.13917247326995 1.50290619358259 0.154845796366435 0.268917889884478 -5.18797830371707 4 9230116N13Rik
-4930515G01Rik 0.992431794232819 -0.788253108012747 1.49297552868103 0.157398682710309 0.272936013635962 -5.18861224143696 7 4930515G01Rik
-Mir381 -0.585788303821621 4.02795786800028 -1.48635287193065 0.159120749771416 0.275503452942618 -5.77368217940814 263 Mir381
-Mir377 -1.26023741335144 -0.742931848089659 -1.46946309676428 0.163584151533594 0.282783957164269 -5.22241603606054 8 Mir377
-Slc25a43 -1.17913476508088 -1.42941348513087 -1.46857624117987 0.163821380968959 0.282783957164269 -5.27142485692471 4 Slc25a43
-Gm15850 -1.19142307125329 -1.42941348513087 -1.46628124024459 0.164436616186004 0.283417188924819 -5.27443785148495 4 Gm15850
-4930577N17Rik 0.996261471651621 -0.788253108012747 1.46486383853075 0.164817550391935 0.283645286571943 -5.22556084614497 7 4930577N17Rik
-Gm1976 1.17098543636347 -1.0728581336826 1.46338871742997 0.165214778610828 0.283900696377943 -5.23522027677804 8 Gm1976
-Gnas 1.20481163504504 3.01946961304055 1.44714466040454 0.169642076912222 0.291070089859918 -5.63385665345255 198 Gnas
-Trpc4 -1.12214295081842 -0.63693223477029 -1.44324497998824 0.170719487323175 0.292478881435048 -5.24590464097049 8 Trpc4
-Mir1839 0.440343224508104 6.65996421341352 1.43932422020417 0.171808441988587 0.293903196865034 -6.13404680514468 1655 Mir1839
-Gm16861 1.02101890973297 0.0237430425874912 1.4372048018983 0.172399485659686 0.294472774158237 -5.24662386648199 15 Gm16861
-Rnu73b 0.921794509533217 1.40212948737186 1.43527079633787 0.17294029293129 0.294954968960541 -5.35714724474774 44 Rnu73b
-9330162012Rik 1.1439446656217 -0.676617508502311 1.43366062517497 0.173391617780733 0.295283337145994 -5.26641582277432 10 9330162012Rik
-1700008J07Rik 1.13211025049156 -0.682253494693378 1.43155460784931 0.173983398326015 0.295849564068529 -5.26903519525208 9 1700008J07Rik
-Snora23 1.20628823206499 -0.684171990235058 1.42281586307131 0.176456826615396 0.299171979403534 -5.28019781733805 14 Snora23
-4930506C21Rik 0.970252362879898 -0.392012482832458 1.42250461225319 0.176545456709643 0.299171979403534 -5.27331937270512 9 4930506C21Rik
-Mir142 0.410046157034538 10.2906694825108 1.4218785186046 0.17672385111129 0.299171979403534 -6.41435699163406 19662 Mir142
-Snora21 0.959353356143857 0.507946560272087 1.41623429110422 0.178338802850048 0.301115991489993 -5.28552716691184 20 Snora21
-Snord65 -1.23356235450304 4.06885013060286 -1.41596621878151 0.178415806740733 0.301115991489993 -5.85809835998808 320 Snord65
-Mir501 0.955024236284725 4.54147542300529 1.41510313454645 0.178663914319654 0.301115991489993 -5.93664817702189 395 Mir501
-2410006H16Rik 0.361629145305105 7.57050758085267 1.41328401324661 0.179187781889619 0.301553479551704 -6.23986339628376 2927 2410006H16Rik
-4930455H04Rik 1.13172981083616 -0.682253494693378 1.40835127249367 0.180614676369773 0.303507136580134 -5.29864005434158 9 4930455H04Rik
-D330041H03Rik 1.39156614960393 -0.558690449548107 1.40593276317899 0.181317688516695 0.304240415584632 -5.30345383247936 20 D330041H03Rik
-Icmt 1.20612960113274 -0.684171990235058 1.40322513481035 0.18210741065202 0.305116821665132 -5.30510284062866 14 Icmt
-2900076A07Rik 0.423795449217499 6.67156273621472 1.3964570180697 0.184093807847588 0.307992719580788 -6.19163088513208 1663 2900076A07Rik
-Luc7l 1.4356244163844 0.36209982723262 1.39261137548867 0.185230378351142 0.309440500290854 -5.32601427080344 36 Luc7l
-Pnpla2 1.02936952347131 0.947589949833786 1.38809066529025 0.186573812314756 0.31122912258938 -5.36176823700877 32 Pnpla2
-Rnu11 1.07261723735483 3.54085705017394 1.37958006862461 0.1891245750451 0.315023562228408 -5.8124177161749 297 Rnu11
-Scarna3a 0.358634347087909 6.84417523287242 1.37423633297104 0.190740692166723 0.317252375746693 -6.23449885762334 1742 Scarna3a
-Mir879 -0.865443524827827 0.513582546463155 -1.37321027685045 0.191052290488549 0.31730809817676 -5.32105187421976 19 Mir879
-4930417O13Rik 1.18361492567874 -0.461823769002454 1.37210884759797 0.191387240468858 0.317402385719429 -5.34431284007925 12 4930417O13Rik
-Mir1843b 0.356514470405414 6.84310339090516 1.36899584712098 0.192336508638543 0.318513724755555 -6.24116798547559 1740 Mir1843b
-4930592A05Rik 1.03052531511564 -1.13917247326995 1.36610709134638 0.193220824547368 0.319052041691096 -5.36399273876038 6 4930592A05Rik
-Gm20300 1.03052531511564 -1.13917247326995 1.36610709134638 0.193220824547368 0.319052041691096 -5.36399273876038 6 Gm20300
-Psmd2 1.47834506664869 0.852672302453096 1.36471212861521 0.193649039068748 0.319087273512383 -5.39396285673084 58 Psmd2
-Mir339 0.40343749694094 5.26814352346546 1.36421616220313 0.193801472869484 0.319087273512383 -6.10182981490915 599 Mir339
-2810055G20Rik -0.97189420184314 0.494067646223494 -1.36078572848097 0.194858481133459 0.320365312641608 -5.33994058231233 19 2810055G20Rik
-Mir196b -1.13510810552843 -0.405891396881051 -1.35478140249157 0.196719850556781 0.322960215086743 -5.34712927474264 10 Mir196b
-Gm6981 1.0403319439215 -0.727574754616467 1.3501513241177 0.198165030794737 0.324865373759763 -5.3710798023265 8 Gm6981
-Mir296 -1.05016591608505 -0.376655389359266 -1.3390650655849 0.201660348607318 0.330121173258177 -5.36030020128242 11 Mir296
-Snord64 -0.5066981906967 3.71324562206005 -1.33655464337627 0.202458725817311 0.330953303950647 -5.91647756097912 197 Snord64
-Snord35b 1.09275289003475 -0.00490479042588459 1.32292989560528 0.206836338140382 0.337625553387949 -5.39467067778802 15 Snord35b
-2810454H06Rik -1.03206410146289 0.244172768278416 -1.32151347019798 0.207295773208692 0.337892110330168 -5.37505541531076 18 2810454H06Rik
-Gm10532 0.930350784049422 -1.18449373319304 1.30182675888512 0.213766681711239 0.347446985516415 -5.4461738806082 5 Gm10532
-Gm16907 0.930350784049422 -1.18449373319304 1.30182675888512 0.213766681711239 0.347446985516415 -5.4461738806082 5 Gm16907
-Snord82 0.521973959385618 3.65015969513716 1.2980839555761 0.215015018125258 0.34897885587613 -5.94664789550243 191 Snord82
-Snhg5 -0.967225523765167 0.0824699275700137 -1.29541157390313 0.2159098951753 0.349918908831395 -5.40370928399367 13 Snhg5
-Mir363 1.15445492135561 -0.478497195912167 1.29452460128447 0.216207564177154 0.349918908831395 -5.43848438880553 13 Mir363
-Gm19710 0.93508992538424 -1.18449373319304 1.28764646778302 0.218526999893145 0.352672286956263 -5.46306405992466 5 Gm19710
-Slc35c2 0.93508992538424 -1.18449373319304 1.28764646778302 0.218526999893145 0.352672286956263 -5.46306405992466 5 Slc35c2
-Snord57 0.262437228600292 9.4077044747777 1.2842500554542 0.219679620562366 0.35403170488935 -6.53234377843161 10268 Snord57
-Scarna9 0.753642588298107 2.12767296655412 1.27094440177951 0.224241711620433 0.36087417906758 -5.69229097174786 67 Scarna9
-9330178D15Rik -1.05713219200343 -1.07849411987367 -1.27002691260158 0.224559037706864 0.360875862004974 -5.49789518736927 5 9330178D15Rik
-Mir130b -0.530010375624871 3.21349184345499 -1.26785063937428 0.225313153729231 0.36157849283411 -5.9082089021571 135 Mir130b
-Sh2d3c -0.946567512897814 0.0824699275700137 -1.25923701193745 0.228317603257779 0.365885372636413 -5.44614755916012 13 Sh2d3c
-Snord49a 0.381301583110176 6.11567405056436 1.25241371523562 0.230719961977962 0.369216657246641 -6.32557176857517 1114 Snord49a
-Dtnb 1.34663394444782 -0.393930978374138 1.24318551402563 0.234000665323399 0.373942239683471 -5.50079398296816 26 Dtnb
-4933404O12Rik 0.960987626070486 -1.18449373319304 1.2390904903603 0.235468171833537 0.375761096590301 -5.51979500865598 5 4933404O12Rik
-9330133O14Rik 0.902410788307409 -1.19510484539135 1.23568661810827 0.236693481520096 0.377188913986634 -5.52481098009737 6 9330133O14Rik
-Mir1970 0.981623687672708 -1.16497883295338 1.23358760674581 0.237451560697612 0.377869220022281 -5.52422742180909 7 Mir1970
-4933433G15Rik -0.845091810799975 -1.13917247326995 -1.21970156103377 0.242514607267494 0.384823868748979 -5.56216873762972 4 4933433G15Rik
-Mir487b -0.845091810799975 -1.13917247326995 -1.21970156103377 0.242514607267494 0.384823868748979 -5.56216873762972 4 Mir487b
-4930413G21Rik 0.989353987464206 -0.386376496641391 1.21883417397784 0.242833641980074 0.384823868748979 -5.51908435781945 12 4930413G21Rik
-Snord83b 0.418249712013688 3.86840948135021 1.21625843057086 0.24378295710375 0.385792446678751 -6.08239291387437 221 Snord83b
-Mir744 0.375928995244175 7.06487761533261 1.21046077244345 0.245930308976254 0.388148264070044 -6.45312420350352 2175 Mir744
-Gm11602 1.0569663896266 1.47452012926735 1.21040249722871 0.245951967504506 0.388148264070044 -5.64187054631556 61 Gm11602
-Clk1 1.34983134183554 0.892119610003834 1.20797593928329 0.246855136854761 0.388972207417494 -5.58134407870492 54 Clk1
-Rn45s 0.683447675537728 14.2197149824842 1.20716947910787 0.247155872373079 0.388972207417494 -6.94183060696878 360404 Rn45s
-Orc6 0.828069658072878 -0.835052547360434 1.19938377098925 0.250073865655696 0.393012592445325 -5.54966196863703 5 Orc6
-Gm10336 -0.862983197557129 -1.13917247326995 -1.19601713252826 0.251343875564565 0.393012592445325 -5.58891156888004 4 Gm10336
-Gm16897 -0.862983197557129 -1.13917247326995 -1.19601713252826 0.251343875564565 0.393012592445325 -5.58891156888004 4 Gm16897
-Abhd11 0.914456828775136 -0.664690062867476 1.19552627276665 0.251529460444447 0.393012592445325 -5.550699097181 8 Abhd11
-D030028A08Rik 0.921530541409756 -1.19510484539135 1.19301988845778 0.25247872941492 0.393012592445325 -5.57311877933865 6 D030028A08Rik
-Dennd2d 0.921530541409756 -1.19510484539135 1.19301988845778 0.25247872941492 0.393012592445325 -5.57311877933865 6 Dennd2d
-Gm14403 0.921530541409756 -1.19510484539135 1.19301988845778 0.25247872941492 0.393012592445325 -5.57311877933865 6 Gm14403
-Gm3219 0.921530541409756 -1.19510484539135 1.19301988845778 0.25247872941492 0.393012592445325 -5.57311877933865 6 Gm3219
-Wbscr25 -0.93987296072539 -1.13917247326995 -1.18824159745951 0.254296125357236 0.395302287510363 -5.59759867475912 4 Wbscr25
-Gabpb1 0.916773949402714 -0.788253108012747 1.18369591465584 0.256034399575008 0.397462925054535 -5.56549504794546 7 Gabpb1
-Mir211 0.825074748111626 -0.880373807283523 1.17378618405685 0.259855584968479 0.40284676963184 -5.57990075138058 6 Mir211
-Nt5c2 1.05516837907923 0.326231814341724 1.17272736320358 0.260266441095664 0.402936240556516 -5.56509032003189 26 Nt5c2
-1500015L24Rik 0.808616217238156 -1.24517208658932 1.16726413306531 0.262394269069057 0.404583595956478 -5.60687790222948 4 1500015L24Rik
-Cyp2d37-ps 0.808616217238156 -1.24517208658932 1.16726413306531 0.262394269069057 0.404583595956478 -5.60687790222948 4 Cyp2d37-ps
-Trpt1 0.808616217238156 -1.24517208658932 1.16726413306531 0.262394269069057 0.404583595956478 -5.60687790222948 4 Trpt1
-BC029722 0.823443920149512 -1.23129317254072 1.16607728334613 0.262858281841981 0.404752091203375 -5.60671637501778 5 BC029722
-1810062O18Rik 0.922758966567288 -0.788253108012747 1.16111625399114 0.264804653612883 0.407199608857547 -5.5903045818008 7 1810062O18Rik
-Snord89 0.738345291933225 1.20312081396993 1.15974138941317 0.265346001348298 0.407482890361249 -5.65593005904902 36 Snord89
-Polg2 0.884660693310263 -1.24517208658932 1.1577939018345 0.266114262880999 0.407565602613717 -5.61723207863543 4 Polg2
-Sgsm1 0.884660693310263 -1.24517208658932 1.1577939018345 0.266114262880999 0.407565602613717 -5.61723207863543 4 Sgsm1
-Mir3058 -0.978203405704609 -0.498012096151827 -1.14953116886071 0.269392696348615 0.411904246746464 -5.58396014066336 9 Mir3058
-Mirlet7c-2 -0.313141269327901 5.8169620327074 -1.14883798280248 0.269669125608772 0.411904246746464 -6.42193298909956 861 Mirlet7c-2
-Mir376b -0.99103045209925 1.03829066633399 -1.14279150067575 0.272089498256322 0.414737087115015 -5.63858333409662 42 Mir376b
-Mir30a -0.151237258601805 15.2301476884988 -1.14239018110005 0.272250725897586 0.414737087115015 -7.0852176231084 565907 Mir30a
-Zfp414 0.85018887029495 -1.23129317254072 1.14035831952976 0.273068126226575 0.415093483425908 -5.63464742242361 5 Zfp414
-2610001J05Rik -0.86697193885018 -0.544811535499514 -1.14000047811695 0.273212275243521 0.415093483425908 -5.59553124660726 7 2610001J05Rik
-Gm5089 1.19134922509429 0.268662794525323 1.1381213178655 0.273970202991538 0.415691491507108 -5.60872857801353 34 Gm5089
-Ankzf1 1.12914177457743 -0.218382196489221 1.13664393067542 0.274567199850722 0.416044057144321 -5.60992873862588 18 Ankzf1
-Rpl22 1.09218207381924 0.761804412553155 1.13340898087306 0.275877847845008 0.417475629165987 -5.63984950101587 40 Rpl22
-Gm9999 0.881407773684291 -1.23129317254072 1.13199470748295 0.276452328431551 0.417576407133251 -5.64361970581462 5 Gm9999
-Mir1965 -0.872346376244262 -0.941052160679803 -1.1314437021438 0.276676392456387 0.417576407133251 -5.64344814416069 5 Mir1965
-1700113A16Rik 0.751208638851327 -0.101771470971538 1.12825054116647 0.277977580239225 0.418986022527021 -5.60264200827995 11 1700113A16Rik
-Parp6 1.01660160898912 0.172934248903557 1.10488791379887 0.287638347248928 0.432975401333808 -5.63192280524991 24 Parp6
-Gm10649 -0.892846942526544 -0.742931848089659 -1.09635581501043 0.291228443757408 0.437316695864095 -5.65951959369185 6 Gm10649
-Mir5128 0.980265466022246 -0.0477575943918147 1.0962126985773 0.291288947288968 0.437316695864095 -5.64043620544502 20 Mir5128
-AA465934 -0.998174655804847 -0.455382481422444 -1.09422848561995 0.292128753507906 0.438001192841683 -5.6384531760545 15 AA465934
-Mirg -0.474362072277141 6.82767679984071 -1.08788511862449 0.294825638847012 0.44112747945308 -6.57223781945416 1940 Mirg
-Krit1 -0.738246664477569 -0.835052547360435 -1.08750674463041 0.294987087487029 0.44112747945308 -5.67818166859644 5 Krit1
-Zfp326 0.916204728436975 0.141670101541695 1.08461400360127 0.296223563256996 0.441769310816773 -5.64946191365176 19 Zfp326
-9430060I03Rik 0.893039869828009 -0.484133182103234 1.08424508768217 0.296381529077199 0.441769310816773 -5.66824954289941 10 9430060I03Rik
-Mphosph9 0.825946492812557 -0.835052547360434 1.08364147818961 0.296640122891534 0.441769310816773 -5.67407248575821 7 Mphosph9
-Mir465 0.753847528822331 -1.27661443246381 1.08288371043005 0.296964996841775 0.441769310816773 -5.70008050633046 4 Mir465
-Mir7-1 -0.462285314925654 2.79727444411883 -1.07768367150356 0.299201499765338 0.444023980943917 -6.04570260584071 96 Mir7-1
-4930502E09Rik 0.820061649339301 -1.27661443246381 1.07755051682844 0.299258931942044 0.444023980943917 -5.70556790028921 4 4930502E09Rik
-Tug1 0.943551372770822 1.74501709615624 1.07570169377573 0.300057207710029 0.444071701003612 -5.82821799993449 78 Tug1
-4930414N06Rik 0.732304356782422 -1.27661443246381 1.07567328957759 0.300069484201389 0.444071701003612 -5.70749397255429 4 4930414N06Rik
-Pvt1 0.777499165180762 -0.452690836228738 1.07397292650801 0.300805069325891 0.444583658161712 -5.67426367019689 8 Pvt1
-Mir880 0.798518477299392 -1.27661443246381 1.06858448026948 0.303144932062895 0.446380139558595 -5.7147416680859 4 Mir880
-9330151L19Rik 0.797000406484024 -1.27661443246381 1.06847129963835 0.303194222750142 0.446380139558595 -5.71485705720905 4 9330151L19Rik
-Lins 0.797000406484024 -1.27661443246381 1.06847129963835 0.303194222750142 0.446380139558595 -5.71485705720905 4 Lins
-A730020M07Rik 0.759617567138328 -1.27661443246381 1.06479234302223 0.304799642362463 0.447013357243663 -5.7186021728347 4 A730020M07Rik
-F630206G17Rik 0.759617567138328 -1.27661443246381 1.06479234302223 0.304799642362463 0.447013357243663 -5.7186021728347 4 F630206G17Rik
-Gm21944 0.759617567138328 -1.27661443246381 1.06479234302223 0.304799642362463 0.447013357243663 -5.7186021728347 4 Gm21944
-Snord8 0.659763836479369 1.10794348423359 1.06250387902545 0.305801430794694 0.447906845361676 -5.74488769750243 32 Snord8
-Afg3l1 0.944955196582147 0.447268206875807 1.06058601378491 0.306642849914595 0.448563450964811 -5.68339660157891 27 Afg3l1
-Vps39 0.961960880735596 -0.76568157730752 1.05915803437452 0.307270446487918 0.448905991603988 -5.69739803344418 12 Vps39
-Mrpl48 0.838840541796115 -0.239213430165402 1.05463054356545 0.309266509401883 0.451244357068476 -5.68718625388737 11 Mrpl48
-Wls -0.798306174379161 -0.590132795422603 -1.04838398068904 0.312036040279375 0.454149609721631 -5.69285981724256 8 Wls
-Mir101c 0.678674341657184 -0.941052160679803 1.04834423627082 0.312053719563329 0.454149609721631 -5.71644979537614 5 Mir101c
-4930565N06Rik -0.760881657711942 -0.452690836228738 -1.04536813721085 0.313379640481894 0.455414522982691 -5.68467326756101 8 4930565N06Rik
-Gm19782 -0.824138055093141 -1.04705177399917 -1.04419216716558 0.313904694022045 0.455414522982691 -5.74437221530442 5 Gm19782
-E130317F20Rik 0.769245257418443 -0.498012096151827 1.04291674364268 0.3144748770515 0.455414522982691 -5.7049158335577 9 E130317F20Rik
-Mir672 -0.747248291924879 -1.04705177399917 -1.04198352749126 0.314892552981749 0.455414522982691 -5.74657924729597 5 Mir672
-Mir20a -0.370723568916546 5.31004708857036 -1.04192548554098 0.314918543938074 0.455414522982691 -6.48442003496676 643 Mir20a
-0610043K17Rik 0.984989107300095 0.566661427402775 1.03734276139365 0.316975604930417 0.457287012691463 -5.71838241477771 32 0610043K17Rik
-2610307P16Rik -0.91429583632135 -0.954931074728396 -1.03725537976782 0.317014922908806 0.457287012691463 -5.74201320442599 6 2610307P16Rik
-B630019K06Rik 0.719990612273558 -0.756810762138252 1.03218755693734 0.319301294119003 0.46000350579518 -5.72479023365126 7 B630019K06Rik
-Gm14872 0.835812662260224 -0.835052547360434 1.03077941192774 0.319938704270154 0.460340556837637 -5.72736949007166 7 Gm14872
-Cops5 0.955225694844395 -0.407547774818283 1.02575302603018 0.322221466881596 0.463041175959573 -5.72322668671274 18 Cops5
-Gm19461 0.915494510219759 -0.788253108012747 1.02058918961822 0.324578899608511 0.465842169123662 -5.73572336698256 11 Gm19461
-Mir702 -0.826707259520221 -0.299891783561682 -1.01839078954777 0.325586298913891 0.465882836241176 -5.70404861077289 12 Mir702
-E130307A14Rik -0.788814584438982 -0.590132795422603 -1.01803072764692 0.325751509050542 0.465882836241176 -5.72282760292051 8 E130307A14Rik
-Mir677 -0.46535805282509 2.7048223776038 -1.01785498662811 0.325832167677878 0.465882836241176 -6.08983176917819 94 Mir677
-2900008C10Rik -0.828374176793865 -0.558690449548107 -1.01087466362321 0.329047523081663 0.469891394037769 -5.72790706263801 8 2900008C10Rik
-Scarna10 0.743056669215782 0.528777793948269 1.00234095871278 0.333009304922059 0.474954521145087 -5.74101823672795 23 Scarna10
-Snord7 -0.835470371413723 -0.676617508502311 -1.00141282716469 0.333442241670381 0.474978274339456 -5.74740702860384 10 Snord7
-Oaz1-ps 0.674104425949451 1.49609964982675 0.999155033797244 0.334497093796054 0.475886763118825 -5.86801256135581 41 Oaz1-ps
-Kcnq1ot1 0.910278085334024 -0.218382196489221 0.997758138243239 0.335150923261523 0.476223167423908 -5.74375068180754 16 Kcnq1ot1
-4921513I03Rik -0.898652409766853 -0.954931074728396 -0.996357559472656 0.335807392489445 0.476352069705573 -5.7819683962692 6 4921513I03Rik
-Snord111 0.487167361404432 2.40322325564047 0.995476712980872 0.336220726321058 0.476352069705573 -6.04721452535901 82 Snord111
-Mir326 -0.382358415670825 3.27011368251419 -0.994342337417545 0.336753562180123 0.476352069705573 -6.21830968460093 144 Mir326
-A330035P11Rik 0.965364268939122 -0.768738207773087 0.993167927399008 0.337305836954342 0.476352069705573 -5.76224148604484 11 A330035P11Rik
-Wiz 0.750657520168244 0.574260899859435 0.993118546042969 0.337329073025507 0.476352069705573 -5.7530631806465 26 Wiz
-4930573O16Rik 0.724242940462577 -0.880373807283523 0.988574355151803 0.33947219472701 0.478785876617451 -5.77014512800664 6 4930573O16Rik
-C030016D13Rik 0.736627595056793 -0.880373807283523 0.98365906844454 0.341801211615667 0.48147553389318 -5.7748146431183 6 C030016D13Rik
-Mir106b -0.272040824179646 6.30534021503053 -0.978912859532382 0.344060849311784 0.483787015120022 -6.6415010931846 1230 Mir106b
-Mir93 0.231991919214371 8.92958242253252 0.978432473677121 0.344290145729586 0.483787015120022 -6.83817344932306 7480 Mir93
-A130049A11Rik 0.749480333675935 -0.90486383353043 0.973825967230468 0.346494399579791 0.485688095725481 -5.78593949448688 8 A130049A11Rik
-Ppp4r1l-ps 0.749480333675935 -0.90486383353043 0.973825967230468 0.346494399579791 0.485688095725481 -5.78593949448688 8 Ppp4r1l-ps
-Snora44 0.286033309288083 5.62130667581717 0.971157099851877 0.3477760255746 0.48688643580444 -6.58548506620032 724 Snora44
-Kat5 0.866499552085197 -0.402623595030772 0.964975242015777 0.35075746085532 0.490458655436177 -5.78144072211864 12 Kat5
-Osbpl1a 1.09737003164025 0.516465901027703 0.963410623524111 0.351514898897857 0.490916156233114 -5.78884397041858 52 Osbpl1a
-Mir1982 0.739352688973082 0.294469154208751 0.962125981745475 0.35213765737009 0.491184678556568 -5.76656609837178 17 Mir1982
-Asb7 0.703526575105393 -0.925695067206612 0.958123449514082 0.354082936025685 0.492563942310599 -5.80224617247519 7 Asb7
-Hdac10 0.974865932277475 -1.17447243960754 0.957964659851365 0.354160264679881 0.492563942310599 -5.81150986834852 18 Hdac10
-Brat1 0.726590679354257 -0.880373807283523 0.957428291454004 0.354421557087644 0.492563942310599 -5.79939146334398 6 Brat1
-Mir491 -0.684898615634921 -0.835052547360435 -0.953861551192324 0.35616253103266 0.494381323489374 -5.80900377777519 5 Mir491
-Pum2 0.976211707535353 0.893848485511468 0.941843079399731 0.362072854082899 0.501974637312986 -5.83976051882873 52 Pum2
-Flcn 0.819178463384112 0.21104107159461 0.936286718836365 0.364828219319466 0.505180823111056 -5.78834781376735 22 Flcn
-2310010J17Rik -0.781496807473563 -0.752064780863374 -0.934867786030351 0.365534182055843 0.505544850576626 -5.81765744708763 10 2310010J17Rik
-Yipf2 0.803138506076097 -0.880373807283523 0.933170155190723 0.366380047226091 0.506101251676719 -5.82160275803741 12 Yipf2
-Pex11b 0.745690782417397 -0.742931848089659 0.932131479018354 0.366898247195751 0.506204232225335 -5.81894124952379 10 Pex11b
-Mir301b -0.741931823310326 0.0963488416186067 -0.928572452406972 0.368677700638315 0.507450144605635 -5.78347200652652 14 Mir301b
-Mir3066 -0.837579077861343 -0.558690449548107 -0.927767726846745 0.369080873917973 0.507450144605635 -5.80554388805339 8 Mir3066
-1110054M08Rik 0.762586926696282 -0.108062930415306 0.927658715560211 0.369135512728026 0.507450144605635 -5.79933690871854 16 1110054M08Rik
-2810008D09Rik 0.62387744108405 2.75194116634391 0.919384284757436 0.373299112497706 0.512041876787549 -6.18722980685037 137 2810008D09Rik
-Gm5512 0.771365549912191 -0.452690836228738 0.919237589387622 0.373373217780228 0.512041876787549 -5.82241315825623 12 Gm5512
-Rbbp8 0.886305125756175 -0.0477575943918147 0.917555243290929 0.374223801048332 0.512592265301497 -5.81282466752688 18 Rbbp8
-Gm11974 0.778082873591224 -0.447944854953861 0.909892000761802 0.37811508552564 0.517301334034479 -5.83079148689953 11 Gm11974
-Mir369 -0.74269677210509 0.589456147344549 -0.905344093956725 0.380437470711399 0.519596997836352 -5.82156063054654 26 Mir369
-Mir26a-2 0.485967334173185 2.96081541822386 0.904823661302764 0.380703847669755 0.519596997836352 -6.23863459210439 131 Mir26a-2
-Minos1 0.704827095217255 0.326231814341724 0.900400917247283 0.382972698552506 0.522069114753178 -5.81919593446542 22 Minos1
-Deaf1 0.779036313891313 -0.299891783561682 0.896459320434846 0.385002448889921 0.524209778261814 -5.83491078724319 14 Deaf1
-Gm19466 -0.749840672361975 -1.04705177399917 -0.887587437647754 0.389597708777317 0.529834309552942 -5.89076869788414 5 Gm19466
-Gm2518 0.63646451042641 -0.558690449548107 0.883457449799982 0.391749438497377 0.532126320625604 -5.85297878336349 8 Gm2518
-Mir505 0.574628179268003 0.386589853479527 0.877080062325064 0.395087742631044 0.535616337424576 -5.8408806452811 16 Mir505
-Gm13483 -0.650881842270608 -1.13917247326995 -0.876756483145742 0.395257630246707 0.535616337424576 -5.90961874985058 4 Gm13483
-A930016O22Rik -0.909159760956733 -0.165684653346019 -0.874712631220314 0.39633183750076 0.535965610314034 -5.83382312143566 20 A930016O22Rik
-4930526L06Rik -0.646483610508766 -1.13917247326995 -0.874478831554822 0.39645484233571 0.535965610314034 -5.91157337325639 4 4930526L06Rik
-1500011K16Rik 0.687958770706193 -0.941052160679803 0.866684426419982 0.400570191138535 0.540789721466861 -5.88463986982684 7 1500011K16Rik
-Adamts10 0.766269359657236 -0.742931848089659 0.865927841035999 0.400971169466226 0.540789721466861 -5.87691249385262 10 Adamts10
-Mir206 -0.641735198874169 -1.04705177399917 -0.859684053228752 0.404290476936943 0.544080673710294 -5.91464885848361 5 Mir206
-Mirlet7a-1 0.288440707007994 4.74252865689731 0.859544351286645 0.404364952941568 0.544080673710294 -6.58293245452761 419 Mirlet7a-1
-Mir382 -0.527248187537959 0.0495494022709194 -0.854532688517629 0.407042720034116 0.547038567207216 -5.84404452207965 12 Mir382
-Snord73a 0.572583034995795 1.81609219396321 0.851752202751694 0.408533400862583 0.548396012216715 -6.06031448455445 64 Snord73a
-AI450353 -0.739501717206301 -0.628239618113655 -0.84525729275282 0.412029489929552 0.551965918621367 -5.88226286676174 12 AI450353
-Rnf126 0.61640700457571 -0.941052160679803 0.844020033078334 0.412697708943189 0.551965918621367 -5.90363669815116 5 Rnf126
-4930452A19Rik -0.567623714118899 -1.13917247326995 -0.842981854548559 0.41325895737657 0.551965918621367 -5.93813552591444 4 4930452A19Rik
-Mir20b -0.567623714118899 -1.13917247326995 -0.842981854548559 0.41325895737657 0.551965918621367 -5.93813552591444 4 Mir20b
-Gm20757 -0.731130631705067 -1.04705177399917 -0.842329981431555 0.41361162175396 0.551965918621367 -5.92915547644012 5 Gm20757
-4931431C16Rik -0.591970897908513 -0.484133182103234 -0.841074383427949 0.414291458744729 0.552203761888197 -5.87182267817147 8 4931431C16Rik
-Mir541 -0.389131733074012 6.47782397759286 -0.840213916014968 0.414757777334079 0.552203761888197 -6.78224992188811 1553 Mir541
-Klc2 0.629802083792426 -0.941052160679803 0.838734263576251 0.415560458996938 0.552479168421516 -5.9080019839148 5 Klc2
-Snapc4 0.677537959473713 -0.941052160679803 0.838048077598245 0.41593304616484 0.552479168421516 -5.90856686178304 9 Snapc4
-2210408F21Rik 0.673125158878238 3.63276510319773 0.835452055835978 0.417344619062095 0.553709546918431 -6.41859057863293 234 2210408F21Rik
-Gm10865 0.652530700740246 -0.558690449548107 0.834529610770428 0.417846946728652 0.553732132656668 -5.8940864123663 8 Gm10865
-Lmf1 -0.698964865722747 -0.133213816846033 -0.831214508127132 0.419655480523413 0.555440326826189 -5.86465518441044 13 Lmf1
-B230208H11Rik -0.324105163507426 4.07425728624104 -0.830383638654244 0.42010955482121 0.555440326826189 -6.51194043474033 250 B230208H11Rik
-Zfp207 0.813007063755825 -0.0836318824890616 0.828134659773233 0.421340237870797 0.556422698391875 -5.88719575711569 19 Zfp207
-Mir1945 0.597491165734377 -0.941052160679803 0.826047545337222 0.422484441705835 0.557288725995789 -5.91837835814761 5 Mir1945
-Snora41 0.348564473053555 4.54185649419262 0.819592789265972 0.426035844548422 0.560279811338197 -6.58753509611365 394 Snora41
-Oxsr1 0.724767749665156 0.244978069667359 0.819331396413772 0.426180068646681 0.560279811338197 -5.88476749078111 24 Oxsr1
-D630024D03Rik 0.728476694326676 -1.31472125515486 0.818971143090679 0.426378890981613 0.560279811338197 -5.94729714256845 8 D630024D03Rik
-4933400L20Rik 0.515324865407562 -1.03317285995058 0.818083247017312 0.426869173233144 0.560279811338197 -5.9337772796173 4 4933400L20Rik
-Xist 0.723357937638788 -1.31472125515486 0.816666748076131 0.427652095638525 0.560279811338197 -5.94915534796961 8 Xist
-Dlg1 0.603909137429248 1.27329048309733 0.815752808761627 0.428157736836546 0.560279811338197 -5.99440605481118 45 Dlg1
-March2 0.877263658846623 0.62903919856468 0.815695775265458 0.428189303669507 0.560279811338197 -5.91500249911908 36 March2
-C230037L18Rik 0.602090880767705 -0.941052160679803 0.813307514125875 0.429512503460807 0.561367430067332 -5.92865426872929 5 C230037L18Rik
-Gm13375 0.630370755592059 -0.941052160679803 0.811990507037629 0.430243308062424 0.561679192790876 -5.9297082862367 5 Gm13375
-Gt(ROSA)26Sor -0.733479640637234 0.703375227668527 -0.811102967738619 0.430736253048963 0.561680073975848 -5.91552151445348 26 Gt(ROSA)26Sor
-Mir16-1 0.23749541505541 5.06012981661098 0.809632974888138 0.431553495333911 0.562103354082183 -6.66710805508667 499 Mir16-1
-4930523C07Rik 0.594215392165458 -0.544811535499514 0.807761652304698 0.432595297587676 0.562150931706581 -5.915729457308 7 4930523C07Rik
-Mir374 0.289766495627774 4.44733832008286 0.806913394226144 0.433068070964141 0.562150931706581 -6.58616786299793 323 Mir374
-Mir374c 0.289766495627774 4.44733832008286 0.806913394226144 0.433068070964141 0.562150931706581 -6.58616786299793 323 Mir374c
-Mir32 0.284410784956249 4.15923774757354 0.802255193307119 0.435670204852205 0.564332305440744 -6.54373122401893 274 Mir32
-4930481A15Rik 0.749607671194882 -0.676617508502311 0.802134533319532 0.435737739783782 0.564332305440744 -5.92746695739246 12 4930481A15Rik
-Mir409 -0.359607138432163 2.88484526509054 -0.797779273016708 0.438179914112214 0.566851793653103 -6.32177877712439 114 Mir409
-Cdh23 0.599378997186575 -0.00965077170076204 0.794288413364285 0.440143672025998 0.568747372346165 -5.90268758787859 14 Cdh23
-Mir187 -0.410978066923546 2.47994750376 -0.791106453483068 0.441938529712543 0.570420658825805 -6.25179118381728 82 Mir187
-1700012D01Rik 0.583673007317414 -0.544811535499514 0.784412244834506 0.445729690119356 0.574663928165181 -5.93404385599654 7 1700012D01Rik
-Tubgcp4 0.664451553261744 -0.360570136957963 0.781428132053519 0.447426298647817 0.576200233360225 -5.92858125197625 13 Tubgcp4
-D930016D06Rik 0.626414726591185 -0.925695067206612 0.770815021447429 0.453493261191949 0.58335491659528 -5.9606398937825 7 D930016D06Rik
-Cep57 0.681384751801818 -0.90486383353043 0.766753154462571 0.455828781677903 0.585698918800099 -5.96205602441123 8 Cep57
-A930006I01Rik -0.665296203586878 -0.0564502110484493 -0.764249316031887 0.457272188017012 0.586892650761991 -5.91664059502587 14 A930006I01Rik
-Spns1 0.563832082258649 -0.600743907620917 0.76139003304349 0.458923976722084 0.588350851056065 -5.9518091247888 9 Spns1
-Fut8 -0.594335457577261 -0.0202618838990762 -0.760096444549607 0.459672490960781 0.588649059692762 -5.91849005226079 13 Fut8
-Gm19522 -0.603683840589023 -0.590132795422603 -0.755842901826103 0.462139073141416 0.590653973169546 -5.94897829684297 8 Gm19522
-Mir874 0.295514313563059 4.89511091554138 0.755611590283585 0.462273442629627 0.590653973169546 -6.68933197812847 439 Mir874
-5031425E22Rik 0.426232500568612 1.59819729877775 0.753049543565295 0.463763358388416 0.591894845549421 -6.09850103143821 41 5031425E22Rik
-2610203C22Rik 0.717338709985131 -0.478497195912167 0.74698345640789 0.46730279346032 0.595745795908632 -5.96274275496501 15 2610203C22Rik
-BC039771 0.591670069535226 -0.941052160679803 0.731476967640175 0.476425656973266 0.606698297551894 -5.99117242861284 7 BC039771
-B230217O12Rik 0.561095991633646 -0.600743907620917 0.728108334120667 0.478421736774268 0.608560982897926 -5.97636714997683 9 B230217O12Rik
-Pradc1 0.638558125216705 -0.941052160679803 0.720376726518506 0.48302220728867 0.613728662044959 -5.99918286949762 7 Pradc1
-4930471I20Rik 0.628368284837395 -0.567561264717375 0.716644411151915 0.48525251902964 0.615389020070981 -5.98432330499153 13 4930471I20Rik
-Ubl4 0.588354263449582 -0.00490479042588451 0.716246202469665 0.485490840342292 0.615389020070981 -5.96107461669334 15 Ubl4
-Snora31 -0.36143449798853 4.31585910590137 -0.715484366086799 0.485946982545095 0.615389020070981 -6.63976294261444 320 Snora31
-Pisd-ps3 0.56333714379083 -0.0202618838990763 0.710204908076067 0.48911506227464 0.618714286092421 -5.96478675414579 15 Pisd-ps3
-Dleu2 0.219184098946397 8.12273369604978 0.708956946599182 0.489865734256984 0.618977633208437 -7.01267950795979 4399 Dleu2
-Ube2w 0.500646796546902 -0.0410931175752576 0.69543523444875 0.498043237514861 0.628614307527053 -5.97437115016694 12 Ube2w
-2310040G24Rik 0.521668371480116 -0.848931461409027 0.693309917822119 0.499335854000457 0.629232647004551 -6.01645462006701 8 2310040G24Rik
-Gm16973 0.520003601671916 -0.848931461409027 0.692816735376406 0.49963608955839 0.629232647004551 -6.01679548706659 8 Gm16973
-9430091E24Rik 0.632405272014803 1.08345345798668 0.690351426110223 0.501138492660048 0.630428908627469 -6.05646241852674 42 9430091E24Rik
-4930599N23Rik 0.731549498463023 -0.297616209139484 0.687698634645228 0.502758111464513 0.631137207128483 -5.99772425069657 22 4930599N23Rik
-Uqcc 0.60456771084976 0.00230964680615132 0.687617297753382 0.502807818825408 0.631137207128483 -5.98129860883947 18 Uqcc
-AF357425 -0.469274766892277 0.0356704882223264 -0.683451535972865 0.505357486136066 0.633640540309067 -5.97309261164346 11 AF357425
-Lrrc57 0.524349090633768 -1.03317285995058 0.680981371472743 0.506872917877587 0.634389061854647 -6.03572221948629 6 Lrrc57
-Mir16-2 -0.292148003746823 3.19006469968901 -0.680666215921933 0.507066454348325 0.634389061854647 -6.46705009548147 133 Mir16-2
-1700052K11Rik -0.500246978727084 -0.360570136957963 -0.677562993700312 0.508974434943859 0.636078674995556 -5.98437458158914 9 1700052K11Rik
-Snord98 0.255484149978109 5.08114085097502 0.673871566865267 0.511249489447753 0.638222830918913 -6.77177075901992 553 Snord98
-Pfkfb2 -0.545354000608178 0.424518477657946 -0.670346587478651 0.513427448101524 0.63926739732123 -5.99345507595512 21 Pfkfb2
-9130221H12Rik 0.493130187244428 -1.03317285995058 0.669887014710966 0.51371179596365 0.63926739732123 -6.04321414453495 6 9130221H12Rik
-Btbd19 -0.547332034034489 -1.13917247326995 -0.669797729280709 0.513767049380866 0.63926739732123 -6.0682117317532 4 Btbd19
-4930509E16Rik 0.570473767057425 -0.600743907620917 0.65989169715578 0.519918547067217 0.646216843359145 -6.02351322613687 11 4930509E16Rik
-Srsf9 -0.620398138974306 -0.299891783561682 -0.656391645137278 0.522102062684203 0.647794698934503 -5.99659806286004 14 Srsf9
-4930547E14Rik -0.479717332437278 -1.13917247326995 -0.656037147154269 0.522323508343333 0.647794698934503 -6.07735963771559 4 4930547E14Rik
-Snord92 0.328191137503612 2.71880718071066 0.648008809237884 0.527352904688381 0.653322111020024 -6.3973107671481 106 Snord92
-4930526I15Rik -0.491752882645034 -0.742931848089659 -0.643842626515511 0.529973595048547 0.655856694089363 -6.04251967943561 8 4930526I15Rik
-Rmi1 0.481912707053239 -0.63693223477029 0.642382362081087 0.53089389225232 0.656283782296747 -6.03629833075496 8 Rmi1
-E2f6 0.599323909462423 -0.393930978374138 0.639357845639497 0.532802879018816 0.656869353859217 -6.02831197673234 16 E2f6
-1190002F15Rik 0.49888080484846 -1.42941348513087 0.637507437962788 0.533972699009268 0.656869353859217 -6.09252279377585 4 1190002F15Rik
-Tsix 0.49888080484846 -1.42941348513087 0.637507437962788 0.533972699009268 0.656869353859217 -6.09252279377585 4 Tsix
-1700034H15Rik 0.543082796194865 -0.788253108012747 0.636899871034629 0.534357113785704 0.656869353859217 -6.04917319027871 7 1700034H15Rik
-Adarb1 -0.552066785536743 -0.202135098099839 -0.636790015626986 0.534426637134148 0.656869353859217 -6.00439550621409 14 Adarb1
-Gm2061 0.463825041047814 -1.39322515798149 0.636165822738289 0.534821761380555 0.656869353859217 -6.08891943947055 5 Gm2061
-G730013B05Rik -0.555071724179367 -0.202135098099839 -0.634045128592704 0.536165415013138 0.657811546806441 -6.00613726849612 14 G730013B05Rik
-Etohd2 0.50091939381951 -0.986373420602892 0.626287461136556 0.54109661778882 0.66314848646299 -6.06649536389095 6 Etohd2
-Fendrr 0.467194943660743 -1.03317285995058 0.625054288937282 0.541882799556935 0.663399435938265 -6.07231128308936 4 Fendrr
-Mir15a 0.206050012741693 7.92756591993174 0.624069296235348 0.542511213731924 0.663456907682878 -7.05700019883519 3883 Mir15a
-Mir29b-1 -0.568163238783593 -0.484133182103234 -0.613223964954576 0.549456958502096 0.670669357445426 -6.03590249794921 10 Mir29b-1
-Magix 0.459516554314059 -1.07849411987367 0.613025611681336 0.549584442779556 0.670669357445426 -6.08477332483564 5 Magix
-Ngrn 0.440449993515304 -1.03317285995058 0.608380804083763 0.552574338249185 0.672951153459094 -6.08264752161091 4 Ngrn
-Snord22 -0.33412784264152 2.12142786320235 -0.608047224549733 0.552789405985685 0.672951153459094 -6.31148705986951 69 Snord22
-1700012D14Rik 0.504465784559469 -0.182193869339848 0.606840054346948 0.553568081556802 0.672951153459094 -6.03643358657414 15 1700012D14Rik
-Malat1 0.457988929028296 4.6947660854097 0.606459872307611 0.553813438298062 0.672951153459094 -6.7660970542376 560 Malat1
-Atp10d 0.608234437022461 -0.360570136957963 0.603954383897974 0.555431872187505 0.674199751240365 -6.05088643641914 17 Atp10d
-Tk2 0.435766247183332 -0.299891783561682 0.584981614285355 0.567770032800142 0.688443791099854 -6.05317939429249 10 Tk2
-Sec23b 0.487360009845026 -0.996984532801206 0.581431884228508 0.570094526650815 0.69052850839552 -6.09488450593516 7 Sec23b
-Yaf2 0.531934801396187 -0.78261712182168 0.57958011589666 0.571309127139827 0.691265868575337 -6.08386174660212 10 Yaf2
-4930562F07Rik 0.531934801396188 -0.78261712182168 0.573556610573136 0.575269449205912 0.694633374984294 -6.08736043819879 10 4930562F07Rik
-Mir25 0.119476823021838 10.3640735387842 0.57349527419075 0.575309850447115 0.694633374984294 -7.25394152331292 19593 Mir25
-H2-T10 0.402558884087807 -1.07849411987367 0.57231748519401 0.576085928522387 0.694835142118439 -6.10908404449287 5 H2-T10
-Ndufs6 0.465406117300006 -0.646065167544005 0.565228910470871 0.580768330016121 0.69791113489181 -6.08343544608261 10 Ndufs6
-4931403G20Rik 0.396304995264058 -1.42941348513087 0.564863424364777 0.581010289039597 0.69791113489181 -6.13656822202315 4 4931403G20Rik
-Gm4265 0.396304995264058 -1.42941348513087 0.564863424364777 0.581010289039597 0.69791113489181 -6.13656822202315 4 Gm4265
-Dnm1l 0.596675525388084 -0.10266422962704 0.564648152710883 0.581152827607449 0.69791113489181 -6.06110568505703 26 Dnm1l
-1600020E01Rik -0.428368836775209 -1.24517208658932 -0.562576463668063 0.582525489062561 0.69791113489181 -6.14310756515597 4 1600020E01Rik
-B230319C09Rik -0.413970740406424 -1.03317285995058 -0.56081648487133 0.583692934466204 0.69791113489181 -6.12332847161404 4 B230319C09Rik
-C230091D08Rik 0.570836755523839 -0.373872894349982 0.560787405184822 0.583712234019791 0.69791113489181 -6.07595261398833 17 C230091D08Rik
-Gm12216 0.527434247362 -0.218382196489221 0.560377655595617 0.583984210925728 0.69791113489181 -6.06856161202066 14 Gm12216
-Myeov2 0.3752456737319 -1.07849411987367 0.560141154452764 0.584141221579034 0.69791113489181 -6.11604668250071 5 Myeov2
-2610035D17Rik -0.409572508644584 -1.03317285995058 -0.557270792901514 0.586048560018765 0.699024554798309 -6.12533252351616 4 2610035D17Rik
-Gm10433 -0.411910596355978 -1.03317285995058 -0.556895131904771 0.586298421509187 0.699024554798309 -6.12554413845499 4 Gm10433
-Sfpq 0.534329997707399 0.889926201599616 0.555891096710229 0.586966499094674 0.69909057981944 -6.11137785471773 42 Sfpq
-1700011J10Rik 0.529021416706896 0.170420802222486 0.543067267793 0.595533596473573 0.708554570986806 -6.06705821666725 22 1700011J10Rik
-1700086O06Rik 0.427757523649846 0.607281696774899 0.539835103869891 0.597702825758803 0.709892527729479 -6.0911847020693 26 1700086O06Rik
-Rbm7 0.453647315238698 -0.171582757141534 0.539018521642786 0.598251494919921 0.709892527729479 -6.07445491272463 14 Rbm7
-2410137F16Rik 0.346588847488861 -0.941052160679803 0.538612144779345 0.598524637752637 0.709892527729479 -6.12117886037737 5 2410137F16Rik
-Snord1b 0.327856599452274 1.28882447100627 0.522934546604764 0.609109798041057 0.721697071199217 -6.18918715059754 37 Snord1b
-Scarna8 0.41857211258756 -0.498012096151827 0.514323740288517 0.614962686208841 0.727875959506523 -6.10050180568233 9 Scarna8
-8430429K09Rik 0.414916540751085 -0.788253108012747 0.512906371671284 0.615928717589278 0.728263903387944 -6.12271326702371 11 8430429K09Rik
-Fbxo34 0.40198566998122 0.1102277556672 0.509352622996849 0.618354078512004 0.730374744909107 -6.08031249836236 15 Fbxo34
-Gm12238 0.450619994317534 0.827986746000388 0.506098398216102 0.620579073491806 0.73224480129695 -6.13049162033361 32 Gm12238
-Abhd10 -0.374596139874294 -0.63693223477029 -0.499427866618794 0.625151920071888 0.736262362403135 -6.11479367410621 6 Abhd10
-Gm6793 0.389273388584781 -1.03317285995058 0.498559841769692 0.625748160602701 0.736262362403135 -6.14405724031514 6 Gm6793
-Gm6225 0.46855445481597 -0.833574367935836 0.498310037608462 0.625919799764278 0.736262362403135 -6.13203165562082 8 Gm6225
-Gm15545 -0.330712612254716 -1.03317285995058 -0.495988985275263 0.627515656816932 0.736611523333955 -6.15804139536778 4 Gm15545
-Gm11747 0.335098793325209 -0.0096507717007621 0.495972744971373 0.627526829783269 0.736611523333955 -6.08743592777084 12 Gm11747
-Mir423 -0.173689502560178 8.7519993946383 -0.492479800459781 0.629932094687387 0.736611523333955 -7.19207867477127 6997 Mir423
-Snora43 -0.378883433040629 -0.788253108012747 -0.492233452418481 0.63010189641288 0.736611523333955 -6.13378146663089 7 Snora43
-2610027K06Rik 0.418297137532964 -0.478497195912167 0.491895430681986 0.630334921865253 0.736611523333955 -6.11191956714245 11 2610027K06Rik
-Mir147 -0.328652468204269 -1.03317285995058 -0.491676373837183 0.630485957074276 0.736611523333955 -6.16020521199643 4 Mir147
-Gm5095 -0.324568459168512 -1.03317285995058 -0.490626195985013 0.631210270949685 0.736611523333955 -6.16072936854254 4 Gm5095
-Gm9776 0.388741227193178 -0.941052160679803 0.490378296979785 0.631381305714819 0.736611523333955 -6.1463267385683 7 Gm9776
-Snord110 0.129319486094622 7.41597550306118 0.48578283224498 0.634555843906532 0.739197500965227 -7.09884262072819 2471 Snord110
-Mir30c-2 0.137775378234264 6.42581414345931 0.485294592286323 0.634893559111238 0.739197500965227 -7.01980953500918 1345 Mir30c-2
-4930555B11Rik 0.2949397151298 1.99987508225673 0.483042377674677 0.636452504372091 0.740257194177937 -6.35317786250865 61 4930555B11Rik
-Mir667 -0.391305201966948 -0.848931461409027 -0.475887236012698 0.641417003923651 0.745271691931656 -6.14780781181069 6 Mir667
-A930015D03Rik 0.376646313021944 0.514898879899676 0.473277554456916 0.643232148337921 0.745696184804009 -6.11541875955504 22 A930015D03Rik
-Mir148b -0.096502203766917 9.5098882524752 -0.472634911746632 0.643679496834764 0.745696184804009 -7.2530384831483 10703 Mir148b
-Mir5114 -0.355477405873343 -0.848931461409028 -0.472543728748277 0.643742981623093 0.745696184804009 -6.14941854830243 6 Mir5114
-Gm11696 0.385891117774572 -1.07849411987367 0.464554766915719 0.649316322766449 0.751389375533994 -6.1657021159416 5 Gm11696
-Mir3473 -0.35240146171116 -0.63693223477029 -0.461057879770776 0.651762750418594 0.752701819182497 -6.13347427347714 6 Mir3473
-6330549D23Rik -0.331449829799571 -0.254570523638594 -0.461047742280118 0.651769848687385 0.752701819182497 -6.10197272310564 9 6330549D23Rik
-2810001G20Rik -0.295155201235964 -1.24517208658932 -0.455859206316244 0.655407440132046 0.756137400597235 -6.19832965924427 4 2810001G20Rik
-Plscr3 -0.307745114670155 -1.03317285995058 -0.449268914134516 0.660040873119404 0.760713773968929 -6.18050852643307 4 Plscr3
-Mir130a 0.0948947867813811 9.53816266066212 0.446663133142086 0.661876928287154 0.762060116221638 -7.26729031205233 11048 Mir130a
-Scarna2 0.402232211609843 0.691735624844723 0.442282244736368 0.664968822143442 0.764848211759745 -6.14647900407425 32 Scarna2
-A430071A18Rik -0.354071454044044 -1.24517208658932 -0.433473215739963 0.671205080288204 0.770467803429417 -6.20849188803248 4 A430071A18Rik
-Cd22 -0.354071454044044 -1.24517208658932 -0.433473215739963 0.671205080288204 0.770467803429417 -6.20849188803248 4 Cd22
-Neat1 0.312359287225155 1.92594411218741 0.430272777772821 0.673477061033794 0.772298820743276 -6.36297140623657 65 Neat1
-Rhno1 -0.354071454044043 -1.24517208658932 -0.428356577421971 0.674838950443228 0.773083576762774 -6.21074475219862 4 Rhno1
-4930426L09Rik 0.280363052731611 -1.13917247326995 0.425550041422787 0.676835754994839 0.774593376578848 -6.19000059303377 4 4930426L09Rik
-Mdp1 -0.32178107969573 -0.848931461409027 -0.424206744137332 0.677792382558126 0.774910930359541 -6.17147301088386 6 Mdp1
-Mir5100 0.286079733326491 0.406104753719187 0.421137469236957 0.679980324136049 0.776133988892759 -6.12996948354496 18 Mir5100
-5430417L22Rik 0.279090327370704 -1.13917247326995 0.420797856848568 0.680222602009429 0.776133988892759 -6.19205319731848 4 5430417L22Rik
-4930568G15Rik 0.325447035573598 -1.07849411987367 0.415950309958232 0.683684799051212 0.779205515291919 -6.18750841807313 5 4930568G15Rik
-Adck5 0.296209487894226 -0.742931848089659 0.415117444464695 0.684280391167838 0.779205515291919 -6.1642627433001 6 Adck5
-A230020J21Rik -0.305089019444194 -0.452690836228738 -0.412631263938286 0.686059583143688 0.780372490447987 -6.13714270799574 8 A230020J21Rik
-3110056K07Rik 0.321778367105555 -0.544811535499514 0.411774615698607 0.686673076608045 0.780372490447987 -6.15031511044177 9 3110056K07Rik
-Mtf2 -0.351812353895571 -0.349382868103075 -0.407554645656379 0.689698567236507 0.783030910663537 -6.13041218971925 15 Mtf2
-BB123696 0.260421273935177 -1.13917247326995 0.404926598716839 0.691585522829203 0.784392725196939 -6.19874553892436 4 BB123696
-Irf3 0.298133825217692 -1.07849411987367 0.396206543932785 0.697861753754696 0.790725184740922 -6.19569620036444 5 Irf3
-Mir18 -0.210024487848092 2.16031654478057 -0.393337083693313 0.699932088731125 0.792284239327593 -6.42958083480241 62 Mir18
-Khdrbs1 0.267969897244776 -0.742931848089659 0.386850701364717 0.704621159953094 0.796801529738831 -6.17582087837821 6 Khdrbs1
-E030003E18Rik 0.292822130692984 -0.727574754616467 0.377280776298752 0.711562098861472 0.803190169478922 -6.17832119950389 8 E030003E18Rik
-9530052E02Rik 0.240241697353475 0.0356704882223265 0.376911575171499 0.71183041230099 0.803190169478922 -6.13775517192755 11 9530052E02Rik
-F420014N23Rik 0.382817630756644 -0.117306762957363 0.375641100841847 0.712754019798555 0.803190169478922 -6.1456273280473 22 F420014N23Rik
-Mir5129 -0.298231732945833 -0.452690836228738 -0.375183978987274 0.713086451956309 0.803190169478922 -6.15215700511858 8 Mir5129
-Mir219-1 0.176264413953521 2.53670005639744 0.373534816743211 0.714286272130486 0.803748162229669 -6.50734777259605 90 Mir219-1
-Mir872 0.111217220149994 5.81048191699923 0.367908518024425 0.718385472265704 0.807166686595139 -7.01869601020665 859 Mir872
-Snhg9 -0.314719071095367 0.412167068430586 -0.365994199209784 0.719782263529738 0.807166686595139 -6.14978861932683 22 Snhg9
-Snora78 -0.314719071095367 0.412167068430586 -0.365994199209784 0.719782263529738 0.807166686595139 -6.14978861932683 22 Snora78
-Orc4 0.297794064812266 -0.544811535499514 0.36548500236509 0.720153976296101 0.807166686595139 -6.16865012392074 9 Orc4
-Dnajc24 0.266599549793499 -0.558690449548107 0.354534559090483 0.728165394656301 0.815345157313876 -6.17320373339602 8 Dnajc24
-6720483E21Rik 0.289583824911831 -0.147092730894626 0.350649982201204 0.731015369891102 0.817733859848772 -6.15445263472245 12 6720483E21Rik
-2310001K24Rik -0.24591482502991 -1.03317285995058 -0.345230837127148 0.734998083052978 0.821383753930899 -6.22275270624135 4 2310001K24Rik
-Alg9 0.309421795900789 -0.676617508502311 0.343236944974775 0.736465460344019 0.822218287918323 -6.18698179945559 10 Alg9
-Snora81 -0.326932802874368 0.0115007762338971 -0.341850898914962 0.737486130537647 0.822552956933974 -6.14759719106399 22 Snora81
-BB283400 -0.279424707462514 -1.03317285995058 -0.340367255810976 0.738579239356336 0.822967687603104 -6.22446215814992 6 BB283400
-Mir466d 0.248413625738754 -1.13917247326995 0.320824573653718 0.753031659736241 0.838252803667367 -6.2299984743374 4 Mir466d
-Mir10a 0.0951038511256634 14.8586469353474 0.311728572155646 0.759791705201772 0.844953543504115 -7.67496459069947 435679 Mir10a
-Gm4890 -0.220857818504799 -1.24517208658932 -0.310290622719027 0.760862255053954 0.845320187942124 -6.25544681917468 4 Gm4890
-6720401G13Rik 0.289187406074058 -1.11660094256472 0.307349482960207 0.763053506555847 0.84693001068115 -6.23186816538886 9 6720401G13Rik
-5430402O13Rik -0.217791204402388 -1.24517208658932 -0.304855090219651 0.764913568480844 0.847346001588973 -6.25716634200865 4 5430402O13Rik
-Gm6297 -0.217791204402388 -1.24517208658932 -0.304855090219651 0.764913568480844 0.847346001588973 -6.25716634200865 4 Gm6297
-Mir877 -0.206666454163989 1.57934953392826 -0.297694706970739 0.77026137051895 0.852442506073833 -6.34009404640788 45 Mir877
-Nol8 0.264698853020979 -0.386376496641391 0.293585635346632 0.7733357709552 0.855015614980507 -6.18259191534761 14 Nol8
-Snord58b 0.282727046691085 4.4176355838932 0.288358932677936 0.777252081328622 0.858513673568207 -6.87726871780058 394 Snord58b
-Gm10785 -0.210547737676215 -1.07849411987367 -0.283356828799375 0.781005991911092 0.861118429107723 -6.24760352460985 7 Gm10785
-1110019D14Rik -0.222492569746086 -0.941052160679803 -0.283205434775104 0.781119696868092 0.861118429107723 -6.23175173996211 5 1110019D14Rik
-2010320M18Rik 0.206496077148502 -0.299891783561682 0.277852680238545 0.785143217405954 0.864718543494396 -6.18149015495467 10 2010320M18Rik
-Ccdc11 0.204900539151867 -1.13917247326995 0.274068094032085 0.787991843292579 0.866356392494407 -6.24428661528185 4 Ccdc11
-Zfp821 -0.202147777847892 -1.24517208658932 -0.273859508838947 0.788148935503238 0.866356392494407 -6.26639816102087 4 Zfp821
-Rtel1 0.201978478856495 -1.13917247326995 0.269324663439279 0.791566624557495 0.869275763830705 -6.24561211960019 4 Rtel1
-Cyp4f41-ps 0.196688936671879 -1.04705177399917 0.266646009723831 0.793587488192855 0.870657042334661 -6.24445495366917 5 Cyp4f41-ps
-Gm10033 0.211295954535854 -0.798864220211061 0.265102653487238 0.794752545801563 0.870977274346489 -6.2215520620046 10 Gm10033
-Gm15713 -0.213339795720713 -0.788253108012747 -0.264237229142785 0.795406064740615 0.870977274346489 -6.22144581162811 7 Gm15713
-9930014A18Rik 0.202831120802033 -0.590132795422603 0.261795875496793 0.797250491951153 0.872159934147906 -6.20377372854167 8 9930014A18Rik
-4930429F24Rik -0.235017737171845 -0.590132795422603 -0.260029712720504 0.798585600641395 0.872783688057311 -6.20264241644327 8 4930429F24Rik
-Slc12a4 0.197276741970114 -0.590132795422603 0.255487613570678 0.802022135394515 0.875700723909226 -6.2054471610575 8 Slc12a4
-Dos 0.183309425420969 -1.13917247326995 0.253065969585285 0.803856084462768 0.876864046244759 -6.24998160826913 4 Dos
-Gm3086 0.181314808962686 -1.13917247326995 0.250796184607887 0.805576116449452 0.877901001784933 -6.25057017845262 4 Gm3086
-Svip -0.191457734911026 -1.13917247326995 -0.248964250053628 0.806965109263563 0.878457915019561 -6.26035672094373 4 Svip
-4930467D21Rik 0.181314808962687 -1.13917247326995 0.248091662395482 0.807626952546468 0.878457915019561 -6.25126461835207 4 4930467D21Rik
-Peg13 -0.205451957492413 -0.392012482832458 -0.240462116640139 0.813420288672865 0.88391671369118 -6.19004292428062 11 Peg13
-Pafah1b1 0.213436895760378 1.10038900250084 0.237624832608292 0.815577632686837 0.885417772498269 -6.26459265250452 40 Pafah1b1
-Snord88a -0.0731689826617632 5.35276818255428 -0.231022702481669 0.820603573853006 0.890027260234107 -7.01600278328706 589 Snord88a
-Mir451 -0.0611495321193691 10.5875987299641 -0.22852689183222 0.822505679316192 0.891243096011182 -7.41440171692514 23834 Mir451
-Gm7367 -0.156676018697354 -0.941052160679803 -0.22725891434218 0.823472473631732 0.891444110449532 -6.24643601325685 5 Gm7367
-4921511C10Rik 0.182682113759512 -0.788253108012747 0.224188388947209 0.825814884315388 0.893132495738253 -6.23070631729261 7 4921511C10Rik
-Rmrp 0.0655095097323271 7.670330005123 0.217766244863006 0.830719680954736 0.897584295976066 -7.21766694613943 3178 Rmrp
-Ufd1l 0.195771351763775 -1.16497883295338 0.216430843996505 0.831740495954836 0.897584295976066 -6.26197687991093 7 Ufd1l
-Snord70 0.10221174934082 2.60861620211668 0.21571068481477 0.832291135094371 0.897584295976066 -6.57150704500313 92 Snord70
-Mrpl15 0.14880859252168 0.33979041413184 0.210945385298102 0.835937006061044 0.900604863671905 -6.19219624410467 16 Mrpl15
-Prmt1 0.168995528929063 -0.61462282166951 0.209987168816182 0.836670600781962 0.900604863671905 -6.21815488399073 10 Prmt1
-Dio3os -0.170981896180084 -0.360570136957963 -0.203892664909895 0.841340111913074 0.904777632132722 -6.19710106994991 9 Dio3os
-Mir5122 0.137338174750326 0.909823171643444 0.202469317623695 0.842431557085991 0.905098311332501 -6.24373086611934 25 Mir5122
-AF357426 0.146994795882059 -0.925695067206612 0.198977007139408 0.845110934201941 0.907122837181952 -6.25084617139261 7 AF357426
-Mir1940 -0.125092164153929 -0.148570910319225 -0.197867539305057 0.845962560042597 0.907183534782522 -6.18834145281798 9 Mir1940
-Zmynd8 -0.133555302246356 1.10038900250084 -0.196079492196291 0.847335481986915 0.907736573107103 -6.27212529839997 30 Zmynd8
-Rit1 0.164276960637274 -0.742931848089659 0.19512393531283 0.848069401342832 0.907736573107103 -6.2329898157428 8 Rit1
-A330093E20Rik -0.166436728635281 -0.529454442026323 -0.193988877004694 0.848941377328815 0.907818286346933 -6.21302114126874 9 A330093E20Rik
-Zc3h7a -0.166703851628381 4.97783950558816 -0.189789214512805 0.852169421422477 0.910416956781879 -6.97955880875527 754 Zc3h7a
-Ftx 0.0504324766144679 6.86722045285186 0.186700290456373 0.854545461173525 0.911489026597255 -7.16164366317441 1746 Ftx
-C730002L08Rik -0.131614117041705 -0.941052160679803 -0.186271197576372 0.854875641216881 0.911489026597255 -6.25516561907766 5 C730002L08Rik
-4930583K01Rik -0.148007765096514 -0.742931848089659 -0.185369656315026 0.855569454413374 0.911489026597255 -6.2348331965382 6 4930583K01Rik
-Snord61 0.0907359318616479 3.7128223821274 0.180846592738436 0.859052196853419 0.914286401155283 -6.78522682866309 233 Snord61
-Fam214b 0.16820554523756 -0.193892170242314 0.179683525243946 0.859948249575887 0.914286401155283 -6.2001202438586 12 Fam214b
-Nnt -0.179572835568388 2.32886502522719 -0.178838866016564 0.860599119054141 0.914286401155283 -6.52700074446877 121 Nnt
-Rbmx 0.0865169681824078 3.76765216278315 0.174526413007477 0.863923795040316 0.916964697805581 -6.796283925268 240 Rbmx
-4930473A02Rik 0.109648341099376 -1.04705177399917 0.164042278471314 0.872017542480434 0.924695182128416 -6.267217819505 5 4930473A02Rik
-1110002L01Rik -0.117583232855061 -1.27661443246381 -0.15904757936708 0.875878740745282 0.926998609682585 -6.28744474569536 4 1110002L01Rik
-Snora34 0.113255539654068 0.926496598553157 0.158111032892598 0.87660311478273 0.926998609682585 -6.25496403965504 26 Snora34
-Mir1306 -0.0980764865609146 0.590346152260739 -0.157138454831744 0.877355478875916 0.926998609682585 -6.21667496967709 20 Mir1306
-Fance -0.140169830118825 -1.13917247326995 -0.156010049757285 0.878228541143718 0.926998609682585 -6.27977120680639 6 Fance
-Snora47 0.0984116028006845 0.141670101541695 0.15597977243771 0.878251969383764 0.926998609682585 -6.19661177976075 13 Snora47
-9330020H09Rik -0.118716898832216 -0.880373807283523 -0.15161129600864 0.881633474249955 0.928922046091183 -6.25469072285892 6 9330020H09Rik
-Ppargc1a 0.131863677613015 0.0735991124007457 0.151522129473541 0.881702520523007 0.928922046091183 -6.1971928092207 18 Ppargc1a
-Ccdc77 0.125473874965672 -0.788253108012747 0.147530169260755 0.884794715485482 0.931319898864331 -6.24537213273817 7 Ccdc77
-Gm16291 -0.137648313668149 -0.0655831438221648 -0.145738917274025 0.886182865432267 0.93192133590619 -6.19632184114116 14 Gm16291
-4930527F14Rik -0.115142188483818 -1.13917247326995 -0.142774358438664 0.888481131158281 0.932061058543482 -6.28181384714649 4 4930527F14Rik
-Cnot2 0.138596259908812 -0.0491775771623832 0.142715474719377 0.888526791198434 0.932061058543482 -6.19956411508142 21 Cnot2
-Gm16039 0.0860006893041729 0.989643407906595 0.141187247205111 0.889711963452007 0.932061058543482 -6.26618211598301 27 Gm16039
-1700007J10Rik -0.113205756535242 -0.788253108012747 -0.140564172695348 0.890195249337243 0.932061058543482 -6.24719705198026 7 1700007J10Rik
-Nup88 -0.124975737193874 -0.239213430165402 -0.139113735537381 0.891320451556099 0.932061058543482 -6.20078805666017 15 Nup88
-Mir1946b -0.11008548363065 0.157027195014887 -0.13736714896008 0.892675718878866 0.932061058543482 -6.19984394272254 15 Mir1946b
-Mirlet7g 0.0395844887395015 11.1837033910963 0.136145707336603 0.893623705801407 0.932061058543482 -7.47148737731621 38152 Mirlet7g
-Gm10548 -0.0899680772947313 -0.34669122290937 -0.136099070118153 0.89365990529298 0.932061058543482 -6.20842396396051 8 Gm10548
-1810034E14Rik -0.075352723109679 2.06893973454929 -0.136089081740893 0.893667658235381 0.932061058543482 -6.48017984570887 64 1810034E14Rik
-4931440J10Rik 0.0849667984841879 0.325911500083247 0.126806897573872 0.900877218801809 0.938600049942131 -6.20615379472686 15 4931440J10Rik
-D330022K07Rik -0.101032157727657 1.65698316208093 -0.125899476060991 0.901582519488672 0.938600049942131 -6.39470229837695 56 D330022K07Rik
-C330013E15Rik -0.103267266578104 -0.742931848089659 -0.124450397809002 0.90270900568535 0.938916112567898 -6.24455208288828 8 C330013E15Rik
-5930430L01Rik 0.136225847581219 -0.214062543734675 0.119769549531324 0.906349281099135 0.941260828400483 -6.20916672317144 18 5930430L01Rik
-Mir496 0.0950067476259783 -0.0703291250970423 0.119430311967314 0.90661319054525 0.941260828400483 -6.20237905877004 13 Mir496
-Mir669a-1 -0.0874831731028778 0.143148280966294 -0.118249227240961 0.907532102973484 0.941358299538859 -6.20192887859536 14 Mir669a-1
-Thap6 -0.0878168955885893 -0.558690449548107 -0.115414375847903 0.909738243408161 0.942789587401192 -6.2280381796423 8 Thap6
-Chpt1 -0.127661446694368 0.920094239341047 -0.11067734520755 0.913426413354199 0.945752756476534 -6.25776602096988 61 Chpt1
-Mir101a 0.0244432527205966 10.3082648606422 0.106757481268119 0.916479919716901 0.948054023931989 -7.4177003681481 19692 Mir101a
-E130102H24Rik 0.0240283211557467 10.3090843068977 0.10496799166705 0.917874358796149 0.94863645234276 -7.4179565369203 19702 E130102H24Rik
-Mir425 0.033427373456698 6.66465089052376 0.101272505699857 0.920754905156141 0.950345151621533 -7.15835044873542 1583 Mir425
-Mir362 -0.0544522631314578 3.35231486548691 -0.100710009948844 0.921193459854001 0.950345151621533 -6.73276860148804 169 Mir362
-Mir17 0.0294271489414047 5.12380283689553 0.0952058023213346 0.925486243109504 0.953911294840058 -7.01165582330098 534 Mir17
-E230016M11Rik -0.0696354231248524 -0.941052160679803 -0.0918911504840257 0.928072541539687 0.955713691242584 -6.26870805660384 5 E230016M11Rik
-Chkb 0.0776691859878007 0.62903919856468 0.0899505655256887 0.929587100348321 0.956253428651282 -6.22872128912026 28 Chkb
-Arhgap1 0.0966234721391633 -0.198705450261483 0.0890720608925429 0.930272835935954 0.956253428651282 -6.21090676133964 18 Arhgap1
-2610002J02Rik -0.0573974454417385 -0.742931848089659 -0.0830721604333289 0.93495769271309 0.959921241425124 -6.24897822876549 6 2610002J02Rik
-4921531C22Rik -0.0635851168193281 -0.941052160679803 -0.0822890634566592 0.93556934061789 0.959921241425124 -6.26957168238787 5 4921531C22Rik
-Srsf7 0.0705092857951172 -0.798864220211061 0.0812705943953252 0.936364891942299 0.959921241425124 -6.25432076732456 8 Srsf7
-1700020I14Rik 0.0749473297339094 0.656660491848086 0.0792648453094152 0.937931837290533 0.960664476075851 -6.23371457269478 32 1700020I14Rik
-2210015D19Rik 0.0647102732837292 -1.23129317254072 0.0766096103443329 0.940006587546541 0.961787864403415 -6.29126291736405 5 2210015D19Rik
-4732416N19Rik 0.0594207089292347 -0.239213430165402 0.0757037539631176 0.940714510669773 0.961787864403415 -6.21193843190686 11 4732416N19Rik
-Mir4660 0.0657262988065859 0.507946560272087 0.0713313665087823 0.944132233479521 0.964417975291077 -6.22141853049579 26 Mir4660
-Mir5113 0.0484940420860439 -0.452690836228738 0.0682297423584027 0.946557346616918 0.966030351064315 -6.22526905240972 8 Mir5113
-E530011L22Rik -0.0404713843408522 -1.27661443246381 -0.0613724386888617 0.951920883212834 0.970284520587158 -6.29857782441741 4 E530011L22Rik
-Gm15441 0.0426104096369733 1.51577639605449 0.0604630248332405 0.952632381396158 0.970284520587158 -6.37051029075163 43 Gm15441
-Fam172a 0.0503754462959195 0.409161384184755 0.0596392630819191 0.953276904100091 0.970284520587158 -6.21618388102567 23 Fam172a
-Rbm18 -0.0538668143348915 -0.299891783561682 -0.0557642901053547 0.956309184092742 0.972503368137093 -6.21475268708383 12 Rbm18
-Gm12191 -0.0354587706805078 -0.880373807283523 -0.0497068478436261 0.961050697355324 0.975480839012736 -6.26527518040501 6 Gm12191
-Rprl3 0.0408471478447264 -0.798864220211061 0.0488367850296659 0.961731876147215 0.975480839012736 -6.25649782741468 8 Rprl3
-H19 -0.0415019911233814 -0.880373807283523 -0.0480992443304892 0.962309326654761 0.975480839012736 -6.26535636348749 6 H19
-Ppifos -0.045813233148843 -0.325698143245111 -0.047655434486338 0.962656813959983 0.975480839012736 -6.21600758126971 15 Ppifos
-Mirlet7a-2 -0.0146726577509692 3.37472927372453 -0.0386745178686727 0.969690141624003 0.981735981892624 -6.74139737131634 158 Mirlet7a-2
-9530082P21Rik -0.027891459987058 -1.27661443246381 -0.0346374807689275 0.972852600944678 0.983192929741255 -6.29990631175915 4 9530082P21Rik
-Mir1196 -0.027891459987058 -1.27661443246381 -0.0346374807689275 0.972852600944678 0.983192929741255 -6.29990631175915 4 Mir1196
-Kcnk2 -0.0253403588431765 -0.835052547360434 -0.031369255395874 0.975413152136616 0.984908324414052 -6.26109829686273 7 Kcnk2
-A930011G23Rik -0.0241809579465951 -0.00965077170076215 -0.0291709235913898 0.977135635463562 0.985775207837245 -6.2074206456237 12 A930011G23Rik
-Mir3103 0.0180714470554271 -1.13917247326995 0.0259355368025229 0.979670906552206 0.987459809519494 -6.2920042186438 4 Mir3103
-Snora75 -0.0172327656019052 -0.590132795422603 -0.021476287065286 0.983165572405378 0.989793060148976 -6.23767380603265 10 Snora75
-4930414L22Rik -0.0152743869054217 -0.484133182103234 -0.0207679670021376 0.983720710086713 0.989793060148976 -6.22874423282067 8 4930414L22Rik
-Mipep 0.0164012673799433 -0.280376883322022 0.0179445082376201 0.985933647271923 0.991145631310365 -6.21618933242714 14 Mipep
-Ippk -0.0101933209515463 0.0857377294202925 -0.0128542290662295 0.989923536727642 0.99288598158411 -6.20831119150974 15 Ippk
-Mir598 -0.00787301950188535 1.52736379718861 -0.0127956250729132 0.989969473858512 0.99288598158411 -6.3747989571524 44 Mir598
-1500017E21Rik 0.0125149432592357 0.202348454937975 0.0124053255048405 0.990275413709656 0.99288598158411 -6.21004071500431 20 1500017E21Rik
-Map1lc3a 0.00968300434227123 0.00717248334519302 0.0097742078067436 0.992337878036726 0.994080350166729 -6.20806203375241 21 Map1lc3a
-Trappc13 -0.00465914834988075 -0.880373807283523 -0.00622703745231414 0.995118499154886 0.995991410119056 -6.26653097741332 6 Trappc13
-Mir1966 -0.00246570556544304 -0.590132795422603 -0.00337044327478241 0.997357828291427 0.997357828291427 -6.23790561933129 8 Mir1966
diff -r 5b6af671d985 -r 8051d14cf819 differential_count_models/test-data/gentestdata.sh
--- a/differential_count_models/test-data/gentestdata.sh Thu Aug 08 20:04:16 2013 -0400
+++ /dev/null Thu Jan 01 00:00:00 1970 +0000
@@ -1,9 +0,0 @@
-#!/bin/bash
-# generate test data for rgGSEA
-# ross lazarus June 2013
-# adjust gseajar_path !
-GSEAJAR_PATH=/home/rlazarus/galaxy-central/tool_dependency_dir/gsea_jar/2.0.12/fubar/rg_gsea_test/8e291f464aa0/jars/gsea2-2.0.12.jar
-python ../rgGSEA.py --input_tab "gsea_test_DGE.xls" --adjpvalcol "5" --signcol "2" --idcol "1" --outhtml "gseatestout.html" --input_name "gsea_test" --setMax "500" --setMin "15" --nPerm "10" --plotTop "20" --gsea_jar "$GSEAJAR_PATH" --output_dir "gseatestout" --mode "Max_probe"
---title "GSEA test" --builtin_gmt "gseatestdata.gmt"
-
-
diff -r 5b6af671d985 -r 8051d14cf819 differential_count_models/test-data/test_bams2mx.xls
--- a/differential_count_models/test-data/test_bams2mx.xls Thu Aug 08 20:04:16 2013 -0400
+++ /dev/null Thu Jan 01 00:00:00 1970 +0000
@@ -1,3243 +0,0 @@
-Contigname 11706Liv_CAAAAG_L003_R1_001_trimmed.fastq_bwa.sam.bam 11706He_AGTTCC_L001_R1_001_trimmed.fastq_bwa.sam.bam 11699He_GGCTAC_L001_R1_001_trimmed.fastq_bwa.sam.bam 11698He_TAGCTT_L001_R1_001_trimmed.fastq_bwa.sam.bam 11700Liv_ATTCCT_L003_R1_001_trimmed.fastq_bwa.sam.bam 11698Liv_ACTGAT_L003_R1_001_trimmed.fastq_bwa.sam.bam 11699Liv_ATGAGC_L003_R1_001_trimmed.fastq_bwa.sam.bam 11700He_CTTGTA_L001_R1_001_trimmed.fastq_bwa.sam.bam
-0610005C13Rik 40 0 2 0 6 70 6 2
-0610007N19Rik 10 17 11 42 2 6 6 10
-0610008F07Rik 16 0 0 0 8 5 4 1
-0610009B14Rik 0 0 0 1 0 0 0 0
-0610009L18Rik 3 2 2 11 0 1 1 1
-0610012G03Rik 6 0 0 0 4 5 2 0
-0610031O16Rik 33 0 0 0 10 25 10 0
-0610038B21Rik 0 0 0 2 0 0 0 0
-0610038L08Rik 0 0 0 0 0 3 0 0
-0610039K10Rik 9 0 0 1 3 1 4 3
-0610040B10Rik 0 0 0 0 0 0 2 0
-0610040F04Rik 2 1 0 1 2 5 2 0
-0610043K17Rik 9 2 0 4 4 12 0 1
-1110002L01Rik 3 1 0 0 0 0 0 0
-1110006O24Rik 0 0 0 1 0 0 0 0
-1110015O18Rik 0 0 0 0 0 0 0 0
-1110017D15Rik 0 0 0 0 0 2 0 0
-1110019D14Rik 1 1 1 0 0 0 2 0
-1110020A21Rik 2 0 0 2 0 2 6 0
-1110028F11Rik 0 0 0 0 0 0 0 0
-1110028F18Rik 0 0 0 0 0 0 0 0
-1110035M17Rik 0 0 0 0 0 0 0 1
-1110036E04Rik 0 0 0 0 0 0 0 0
-1110038B12Rik 9406 1346 1212 1600 7604 6486 8084 1328
-1110046J04Rik 0 0 0 0 0 0 0 1
-1110054M08Rik 6 1 0 1 0 6 1 1
-1190002F15Rik 0 0 0 0 0 4 0 0
-1300002E11Rik 10 1 0 0 0 17 0 0
-1300015D01Rik 0 0 0 0 1 2 0 0
-1500002O10Rik 0 0 0 0 0 0 0 0
-1500004A13Rik 0 0 0 0 0 0 0 0
-1500009C09Rik 0 0 0 0 0 0 0 0
-1500011B03Rik 0 0 0 0 1 0 0 0
-1500011K16Rik 0 0 0 1 0 4 2 0
-1500012K07Rik 0 0 0 0 0 0 0 0
-1500015A07Rik 0 0 0 0 0 0 0 0
-1500015L24Rik 2 0 0 0 0 2 0 0
-1500016L03Rik 0 0 0 0 0 0 0 0
-1500017E21Rik 4 1 3 0 0 7 1 4
-1600002D24Rik 0 0 1 2 0 2 0 2
-1600010M07Rik 0 0 0 0 0 0 0 0
-1600019K03Rik 0 0 0 0 0 0 0 0
-1600020E01Rik 2 0 0 0 0 0 0 2
-1600023N17Rik 0 0 0 0 0 0 1 0
-1600025M17Rik 0 0 0 0 0 0 0 0
-1600029I14Rik 1 0 0 0 0 0 0 0
-1600029O15Rik 0 0 0 0 0 0 0 0
-1700001D01Rik 0 0 0 0 0 0 0 1
-1700001G11Rik 0 0 0 0 0 0 0 0
-1700001G17Rik 1 0 0 0 0 0 0 1
-1700001J11Rik 0 0 0 0 0 0 0 0
-1700001K23Rik 0 0 0 0 0 0 0 0
-1700001L05Rik 6 0 0 0 0 6 4 0
-1700001O22Rik 0 0 0 0 0 0 0 0
-1700003C15Rik 0 0 0 0 0 0 0 0
-1700003D09Rik 1 0 0 0 0 1 0 0
-1700003F17Rik 1 2 1 4 0 2 0 6
-1700003G13Rik 0 0 0 0 0 0 0 0
-1700003G18Rik 2 0 0 1 0 0 0 0
-1700003H04Rik 0 0 0 0 0 0 0 0
-1700003L19Rik 0 5 4 12 0 0 0 2
-1700003M07Rik 0 0 0 0 0 0 0 0
-1700003P14Rik 0 0 0 0 0 0 0 0
-1700006F04Rik 0 0 0 0 0 0 0 0
-1700006H21Rik 0 0 0 0 0 0 0 0
-1700007F19Rik 0 0 0 0 0 0 0 0
-1700007J10Rik 0 0 0 2 1 3 0 1
-1700007L15Rik 0 0 0 0 0 0 1 0
-1700007P06Rik 0 0 0 0 0 0 0 0
-1700008J07Rik 4 0 0 0 1 0 3 1
-1700008K24Rik 0 0 0 0 0 0 0 0
-1700009C05Rik 0 0 0 1 0 0 0 0
-1700009J07Rik 0 0 0 0 0 0 0 0
-1700010I02Rik 0 0 0 0 0 0 0 0
-1700010J16Rik 0 0 0 0 0 0 0 0
-1700010K23Rik 0 0 0 0 0 0 0 0
-1700011B04Rik 0 0 0 0 0 0 0 0
-1700011J10Rik 1 2 0 2 9 0 7 1
-1700011M02Rik 0 0 0 0 0 0 0 0
-1700012B15Rik 7 0 0 0 2 8 1 1
-1700012D01Rik 1 1 1 0 1 2 1 0
-1700012D14Rik 5 0 0 5 2 2 0 1
-1700012I11Rik 0 2 0 0 0 0 0 0
-1700013G23Rik 0 0 0 0 0 0 0 0
-1700016G22Rik 0 0 0 0 0 0 0 0
-1700016L04Rik 0 0 0 0 0 0 0 0
-1700016L21Rik 0 0 0 0 0 0 0 0
-1700016P04Rik 0 0 0 0 0 0 0 0
-1700017G19Rik 0 0 0 0 0 0 0 0
-1700017J07Rik 0 0 0 0 0 0 0 0
-1700018A04Rik 0 0 0 0 2 1 0 0
-1700018B24Rik 0 0 0 0 0 0 0 0
-1700018G05Rik 0 0 0 0 0 0 0 0
-1700018L02Rik 8 1 0 0 4 6 0 1
-1700019B21Rik 0 0 0 0 0 0 0 0
-1700019E08Rik 0 0 0 0 0 0 0 0
-1700019G24Rik 0 0 0 0 0 0 0 0
-1700020G17Rik 0 1 1 1 0 0 0 0
-1700020I14Rik 6 4 0 6 0 12 2 2
-1700020M21Rik 0 0 0 0 0 0 0 0
-1700020N01Rik 0 0 0 0 0 0 0 0
-1700020N18Rik 0 0 0 0 0 0 0 0
-1700021N21Rik 0 0 0 0 0 0 0 0
-1700022A21Rik 0 0 0 0 0 0 0 0
-1700022A22Rik 0 0 0 0 0 0 0 0
-1700022E09Rik 0 0 0 0 0 0 0 0
-1700022H16Rik 0 0 0 0 0 0 0 0
-1700023C21Rik 0 0 0 0 0 0 0 0
-1700023F02Rik 0 0 0 0 0 0 0 0
-1700023L04Rik 0 0 0 0 0 0 0 0
-1700024B18Rik 0 0 0 0 0 0 0 0
-1700024F13Rik 0 0 0 0 0 0 0 0
-1700024P03Rik 0 0 0 0 0 0 1 0
-1700025B11Rik 0 0 0 0 0 0 0 0
-1700025C18Rik 0 0 0 0 0 0 0 0
-1700025F24Rik 0 0 0 0 0 0 0 0
-1700025K24Rik 0 0 0 0 0 0 0 0
-1700025M24Rik 0 0 0 0 0 0 0 0
-1700025N23Rik 0 0 0 0 0 0 0 0
-1700026D11Rik 0 0 0 0 0 0 0 1
-1700026F02Rik 0 0 0 0 0 0 0 0
-1700027A15Rik 0 0 0 0 0 0 0 0
-1700027F09Rik 0 0 0 0 0 0 0 0
-1700027H10Rik 0 0 0 0 0 0 0 0
-1700027I24Rik 0 0 0 0 0 0 0 0
-1700027J07Rik 1 0 1 0 0 0 0 0
-1700028B04Rik 0 0 0 0 0 0 0 0
-1700028D13Rik 0 0 0 0 0 0 0 0
-1700028E10Rik 3 0 0 2 3 1 2 0
-1700028I16Rik 0 0 0 0 0 0 0 0
-1700028J19Rik 0 0 0 0 0 0 0 0
-1700028M03Rik 0 0 0 0 0 0 0 0
-1700028P15Rik 0 0 0 0 0 0 0 0
-1700029B22Rik 0 0 0 0 0 0 0 0
-1700029J03Rik 0 0 0 0 0 0 0 0
-1700029M20Rik 0 0 0 0 0 0 0 0
-1700029N11Rik 0 0 0 0 0 0 0 0
-1700030A11Rik 0 0 0 0 0 0 0 0
-1700030C10Rik 0 0 0 0 0 0 0 0
-1700030F04Rik 0 0 0 0 0 0 0 0
-1700030L20Rik 0 0 0 0 0 0 0 0
-1700030M09Rik 0 0 0 0 0 0 0 0
-1700030N03Rik 0 0 0 0 0 0 0 0
-1700030O20Rik 0 0 0 0 0 0 0 0
-1700031A10Rik 0 0 0 0 0 0 0 0
-1700031M16Rik 0 0 0 0 0 0 0 0
-1700031P21Rik 0 0 0 0 0 0 0 0
-1700034G24Rik 0 0 0 0 0 0 0 0
-1700034H15Rik 1 0 2 0 3 1 0 0
-1700034I23Rik 0 0 0 0 0 0 0 0
-1700034K08Rik 0 0 0 0 0 0 0 0
-1700034P13Rik 1 0 0 0 0 2 1 0
-1700036G14Rik 0 0 0 0 0 0 0 0
-1700039E22Rik 0 0 0 0 0 0 0 0
-1700040N02Rik 0 0 0 0 0 0 0 1
-1700041C23Rik 0 0 0 0 0 0 0 0
-1700041M19Rik 0 0 0 0 0 0 0 0
-1700042G15Rik 0 0 0 0 0 0 0 0
-1700042O10Rik 4 0 0 0 1 1 0 0
-1700044C05Rik 0 0 0 0 0 0 0 0
-1700044K03Rik 0 0 0 0 0 0 0 0
-1700045H11Rik 4 0 1 0 2 3 5 0
-1700046C09Rik 0 0 0 0 0 0 0 0
-1700047E10Rik 0 0 0 0 0 0 0 0
-1700047G03Rik 0 0 0 0 0 0 0 0
-1700047L14Rik 0 0 0 0 0 0 0 0
-1700047M11Rik 0 0 0 0 0 0 0 0
-1700048M11Rik 0 1 0 0 0 0 0 0
-1700048O20Rik 0 0 0 0 0 0 0 0
-1700049E15Rik 0 0 0 0 0 0 0 0
-1700049E22Rik 0 0 0 0 0 0 0 0
-1700049L16Rik 0 0 0 0 0 0 0 0
-1700051A21Rik 0 0 0 0 0 0 0 0
-1700052I22Rik 0 0 0 0 0 0 0 0
-1700052K11Rik 1 2 0 2 0 2 1 1
-1700054A03Rik 0 0 0 1 0 0 0 1
-1700054K19Rik 0 0 0 0 0 0 0 0
-1700054M17Rik 0 0 0 0 0 0 0 0
-1700055C04Rik 0 0 0 0 0 0 0 0
-1700057H15Rik 0 0 0 0 0 0 0 0
-1700058G18Rik 0 0 0 0 0 0 0 0
-1700060C16Rik 0 0 1 0 0 2 0 0
-1700060C20Rik 0 0 0 0 0 0 0 0
-1700061F12Rik 0 0 0 0 0 0 0 0
-1700061I17Rik 1 0 0 3 0 0 0 1
-1700063A18Rik 0 0 0 0 0 0 0 0
-1700063D05Rik 0 0 0 0 0 0 0 0
-1700063O14Rik 0 0 0 0 0 0 0 0
-1700064J06Rik 0 0 0 0 0 0 0 0
-1700064M15Rik 0 0 0 0 0 0 0 0
-1700065D16Rik 0 0 0 0 0 0 0 0
-1700065I16Rik 0 0 0 0 0 0 0 0
-1700065J11Rik 0 0 0 0 0 0 0 0
-1700065J18Rik 0 0 0 0 0 0 0 0
-1700065O20Rik 0 0 1 0 0 0 0 0
-1700066B17Rik 0 0 0 0 0 0 0 0
-1700066J24Rik 0 0 0 0 0 0 0 0
-1700066N21Rik 0 0 1 0 0 0 0 0
-1700066O22Rik 0 0 0 0 0 0 0 0
-1700067G17Rik 1 0 0 0 0 0 0 0
-1700069L16Rik 0 0 1 0 0 0 0 0
-1700069P05Rik 0 0 0 0 0 0 0 0
-1700071M16Rik 0 0 0 0 0 0 0 0
-1700072B07Rik 0 0 0 0 0 0 0 0
-1700072O05Rik 0 0 0 0 0 0 0 0
-1700073E17Rik 0 0 0 0 0 0 0 0
-1700074H08Rik 0 0 0 0 0 0 0 0
-1700080N15Rik 0 0 0 0 0 0 0 0
-1700081H04Rik 0 0 0 0 0 0 0 0
-1700081H22Rik 0 0 0 0 0 0 0 0
-1700084E18Rik 0 1 0 0 0 0 0 0
-1700084F23Rik 0 0 0 0 0 0 0 0
-1700084J12Rik 0 0 0 0 0 0 0 0
-1700085B03Rik 0 0 0 0 0 0 0 0
-1700085C21Rik 0 0 0 0 0 0 0 0
-1700086L19Rik 0 0 0 0 0 0 0 0
-1700086O06Rik 8 1 3 7 2 1 4 0
-1700091E21Rik 0 0 0 0 0 0 1 2
-1700091H14Rik 0 0 0 0 0 0 0 0
-1700092C02Rik 0 0 0 0 0 0 0 0
-1700092C10Rik 1 0 0 0 0 0 0 0
-1700092E19Rik 0 0 0 0 0 0 0 0
-1700092K14Rik 0 0 0 0 0 0 0 0
-1700094J05Rik 0 0 0 0 0 1 0 0
-1700094M24Rik 0 0 0 0 0 0 0 0
-1700095A21Rik 0 0 0 0 0 0 0 0
-1700095B10Rik 0 0 0 0 0 0 2 0
-1700095B22Rik 0 1 0 0 0 0 0 0
-1700096J18Rik 0 0 0 0 0 0 0 0
-1700096K18Rik 2 0 0 0 0 0 0 0
-1700097N02Rik 0 0 0 0 0 0 0 0
-1700100L14Rik 0 0 0 0 0 0 0 0
-1700101I11Rik 0 0 0 0 1 2 0 0
-1700101O22Rik 0 0 0 0 0 0 0 0
-1700102H20Rik 0 0 0 4 0 0 0 0
-1700104A03Rik 0 0 0 0 0 0 0 0
-1700105P06Rik 0 1 0 0 0 0 0 0
-1700108F19Rik 0 0 0 0 0 0 0 0
-1700108J01Rik 0 0 0 0 0 0 0 0
-1700109F18Rik 0 0 0 0 0 0 0 0
-1700109G14Rik 0 0 0 0 0 0 0 0
-1700109G15Rik 0 0 0 0 0 0 0 0
-1700109I08Rik 0 0 0 0 0 0 0 0
-1700110C19Rik 0 0 0 0 0 0 0 0
-1700110I01Rik 0 0 0 0 0 0 0 0
-1700110K17Rik 0 0 0 0 0 0 0 0
-1700111N16Rik 0 0 0 0 0 0 0 0
-1700112H15Rik 0 0 0 0 0 0 0 0
-1700112J05Rik 0 0 0 0 0 0 0 0
-1700113A16Rik 2 1 0 1 1 2 3 1
-1700119H24Rik 0 0 0 0 0 2 0 0
-1700120C14Rik 2 0 0 0 0 0 0 0
-1700120E14Rik 2 1 0 0 0 0 0 0
-1700120G07Rik 0 0 0 0 0 0 0 0
-1700120K04Rik 0 1 0 0 0 0 0 0
-1700121L16Rik 0 0 0 0 0 0 0 0
-1700121N20Rik 0 0 0 0 0 0 0 0
-1700123L14Rik 0 0 0 0 0 0 0 0
-1700123M08Rik 0 6 3 3 0 1 0 1
-1700123O12Rik 0 0 0 1 0 0 0 0
-1700123O21Rik 0 0 0 0 0 0 0 0
-1700125G02Rik 0 0 0 0 0 0 0 0
-1700125G22Rik 0 0 0 0 1 0 0 0
-1700125H03Rik 0 0 0 1 0 0 2 0
-1700126H18Rik 0 0 0 0 1 0 0 2
-1700128A07Rik 0 0 0 0 0 0 0 0
-1700128F08Rik 0 0 0 0 0 0 0 0
-1810006J02Rik 0 0 0 0 0 0 0 0
-1810007C17Rik 0 0 0 0 0 0 0 0
-1810007D17Rik 0 0 1 0 0 0 0 0
-1810007I06Rik 0 0 0 0 0 0 0 0
-1810008I18Rik 8 0 0 0 0 16 1 0
-1810010D01Rik 0 1 0 0 0 0 0 0
-1810012K16Rik 0 0 1 1 0 0 1 0
-1810013A23Rik 0 0 0 0 0 0 0 0
-1810014B01Rik 1 0 0 0 1 4 0 0
-1810018F18Rik 0 0 0 0 0 0 0 0
-1810019D21Rik 42 0 0 0 36 30 9 0
-1810020O05Rik 0 0 0 0 0 0 0 0
-1810021B22Rik 0 0 0 0 0 2 0 0
-1810026B05Rik 8 0 0 0 1 5 1 0
-1810032O08Rik 228 30 39 93 168 111 102 30
-1810034E14Rik 11 9 2 15 10 4 8 5
-1810035I16Rik 0 0 0 0 0 0 0 0
-1810044D09Rik 1 0 0 0 0 1 0 0
-1810053B23Rik 0 0 0 0 0 0 0 0
-1810058I24Rik 10 0 2 2 2 28 6 0
-1810062O18Rik 1 1 0 0 2 3 0 0
-1810064F22Rik 8 0 0 0 2 4 0 0
-2010001M06Rik 0 0 0 0 0 0 0 0
-2010003O02Rik 3 0 0 3 2 6 3 0
-2010009K17Rik 7 2 1 0 0 8 3 0
-2010010A06Rik 0 0 0 0 0 0 0 0
-2010016I18Rik 0 0 0 0 0 0 0 0
-2010106C02Rik 0 0 0 0 0 0 0 0
-2010204K13Rik 0 0 0 0 0 0 0 0
-2010308F09Rik 0 1 2 2 0 0 1 1
-2010310C07Rik 5 1 0 0 1 1 1 0
-2010320M18Rik 1 0 0 3 2 1 1 2
-2210015D19Rik 0 1 0 0 0 4 0 0
-2210019I11Rik 0 0 0 0 0 0 0 0
-2210039B01Rik 0 0 0 0 0 0 0 0
-2210408F21Rik 6 6 18 18 42 66 54 24
-2210409D07Rik 0 0 1 0 0 0 0 0
-2210409E12Rik 0 0 0 0 0 0 0 0
-2210414B05Rik 0 0 0 0 0 0 0 0
-2210416O15Rik 0 0 0 1 1 0 0 0
-2210417A02Rik 0 0 0 0 0 2 0 0
-2210417K05Rik 0 0 0 0 0 0 0 0
-2210420H20Rik 0 0 0 0 0 0 0 0
-2310001H17Rik 13 0 0 0 9 14 15 3
-2310001K24Rik 0 0 0 1 1 1 0 1
-2310002D06Rik 0 0 0 0 0 0 0 0
-2310002F09Rik 0 0 0 0 0 0 0 0
-2310005A03Rik 0 0 0 0 0 0 0 0
-2310005E17Rik 0 0 0 0 0 0 0 0
-2310008N11Rik 0 0 0 0 0 0 0 0
-2310009A05Rik 1 0 0 0 0 0 0 0
-2310010J17Rik 5 2 0 3 0 0 0 0
-2310014F07Rik 0 0 2 1 0 0 0 0
-2310015A10Rik 5 0 0 0 0 2 1 0
-2310015B20Rik 0 0 0 0 0 0 0 0
-2310015D24Rik 0 0 0 0 0 1 0 0
-2310016D03Rik 0 0 1 1 0 0 0 0
-2310020H05Rik 0 0 0 0 0 0 0 0
-2310030A07Rik 0 0 0 0 0 0 0 0
-2310034G01Rik 0 0 0 0 0 0 0 0
-2310034O05Rik 0 0 0 0 0 0 0 0
-2310039L15Rik 1 0 0 0 0 0 0 0
-2310040G24Rik 4 0 0 2 0 0 2 0
-2310043L19Rik 0 0 0 0 0 0 0 0
-2310043O21Rik 2 0 1 0 0 0 0 0
-2310044G17Rik 6 0 2 0 3 7 2 1
-2310050B05Rik 0 1 0 4 0 0 2 3
-2310061J03Rik 2 0 0 0 1 0 0 0
-2310065F04Rik 0 0 0 0 0 0 0 0
-2310068J16Rik 0 0 0 0 0 0 0 0
-2310069B03Rik 0 0 0 0 0 0 0 0
-2310069G16Rik 0 0 0 0 0 0 0 0
-2310081J21Rik 0 0 0 0 0 0 0 0
-2410003L11Rik 0 0 0 0 0 0 0 0
-2410004I01Rik 0 0 0 0 0 0 0 0
-2410004N09Rik 22 0 0 2 0 26 0 0
-2410006H16Rik 656 221 199 482 413 264 454 238
-2410007B07Rik 0 0 0 0 0 0 0 0
-2410012E07Rik 0 0 0 0 0 0 0 0
-2410017I17Rik 1 0 0 0 0 0 0 0
-2410018L13Rik 0 0 0 0 0 0 0 0
-2410021H03Rik 0 0 0 0 0 0 0 0
-2410057H14Rik 0 0 0 0 0 0 0 0
-2410088K16Rik 0 0 0 0 0 0 0 0
-2410114N07Rik 0 0 0 0 0 0 0 0
-2410133F24Rik 1 0 1 0 0 0 0 0
-2410137F16Rik 1 0 0 2 0 1 1 0
-2500004C02Rik 0 0 0 0 0 0 0 0
-2510003D18Rik 0 0 0 0 0 0 0 0
-2600006L11Rik 0 0 0 0 0 0 2 0
-2610001J05Rik 0 1 1 1 1 2 0 1
-2610002J02Rik 1 0 0 2 1 1 0 1
-2610005L07Rik 0 0 0 0 0 0 0 0
-2610016A17Rik 0 0 0 0 0 0 0 0
-2610017I09Rik 0 0 0 0 0 0 0 0
-2610019E17Rik 248 45 22 86 196 98 155 42
-2610020C07Rik 7 2 0 0 0 9 1 0
-2610027K06Rik 1 0 2 1 0 6 1 0
-2610028E06Rik 0 0 0 0 0 0 0 0
-2610035D17Rik 1 0 1 0 0 1 0 1
-2610035F20Rik 1 0 0 0 0 2 0 0
-2610037D02Rik 0 1 0 0 0 0 0 1
-2610100L16Rik 0 0 0 0 0 0 0 0
-2610203C20Rik 30 132 92 190 18 6 23 119
-2610203C22Rik 6 1 1 0 0 7 0 0
-2610204G22Rik 2 0 0 0 0 0 0 0
-2610206C17Rik 1 0 0 0 0 1 1 0
-2610306M01Rik 2 0 0 0 0 0 0 0
-2610307P16Rik 0 0 2 0 0 0 2 2
-2610316D01Rik 0 0 0 0 0 0 0 0
-2610507I01Rik 0 0 0 0 0 0 0 0
-2700038G22Rik 90 108 100 322 58 68 58 68
-2700046A07Rik 0 0 0 0 0 0 0 0
-2700046G09Rik 0 0 1 0 0 0 0 0
-2700054A10Rik 0 0 0 0 0 0 0 0
-2700069I18Rik 1 0 0 0 0 2 2 0
-2700070H01Rik 0 0 0 0 0 0 0 0
-2700081L22Rik 0 0 0 0 0 0 0 0
-2700086A05Rik 0 0 0 0 0 0 0 0
-2700089E24Rik 27 1 1 0 0 36 2 3
-2700089I24Rik 0 0 1 0 0 0 0 0
-2700097O09Rik 0 0 0 0 0 2 0 0
-2700099C18Rik 0 0 0 0 0 0 0 0
-2810001G20Rik 2 0 0 2 0 0 0 0
-2810002D19Rik 0 0 0 0 0 0 0 0
-2810008D09Rik 58 9 4 13 4 31 7 11
-2810011L19Rik 0 0 0 0 0 0 0 0
-2810013P06Rik 4 0 0 2 4 2 1 0
-2810025M15Rik 0 1 0 0 0 0 0 0
-2810029C07Rik 0 1 0 0 0 0 0 0
-2810032G03Rik 0 0 0 0 0 0 0 0
-2810047C21Rik1 0 0 0 0 0 0 0 0
-2810049E08Rik 0 0 0 0 0 0 0 0
-2810055G20Rik 4 3 3 3 0 2 2 2
-2810403D21Rik 0 0 0 0 0 0 0 0
-2810404M03Rik 0 0 0 0 0 0 0 0
-2810405F15Rik 0 0 0 0 0 0 0 0
-2810408I11Rik 0 0 0 0 0 1 1 0
-2810410L24Rik 0 2 0 0 0 0 1 0
-2810429I04Rik 0 0 0 0 0 0 0 0
-2810433D01Rik 0 0 0 0 0 0 0 0
-2810442I21Rik 0 0 0 0 0 1 0 0
-2810442N19Rik 0 1 0 0 0 0 0 0
-2810454H06Rik 1 2 2 5 0 1 6 1
-2810468N07Rik 0 0 0 0 0 0 0 0
-2810471M01Rik 0 0 0 0 0 0 0 0
-2900002K06Rik 1 0 0 0 0 1 0 0
-2900005J15Rik 1 0 1 0 0 0 0 0
-2900008C10Rik 0 1 2 2 2 0 1 0
-2900009J06Rik 7 0 0 0 0 3 0 0
-2900041M22Rik 0 0 0 0 0 0 0 0
-2900052N01Rik 0 0 0 0 0 0 0 0
-2900055J20Rik 0 0 0 1 0 0 0 0
-2900056M20Rik 0 2 2 4 0 0 2 0
-2900057B20Rik 0 0 0 0 0 1 0 0
-2900060B14Rik 27 18 14 57 21 6 11 31
-2900076A07Rik 301 116 77 417 183 246 226 97
-2900079G21Rik 0 0 0 0 0 0 0 0
-2900092D14Rik 0 0 0 0 0 0 0 0
-2900093L17Rik 0 0 0 0 0 0 0 0
-2900097C17Rik 0 0 0 0 0 0 0 0
-3000002C10Rik 0 0 0 0 0 0 0 0
-3010001F23Rik 0 0 0 2 0 0 0 0
-3010033K07Rik 0 0 0 0 0 0 0 0
-3100003L05Rik 0 0 0 0 0 0 0 0
-3110009F21Rik 0 0 0 0 0 0 0 0
-3110015C05Rik 0 0 0 0 0 0 0 0
-3110021A11Rik 0 0 0 1 0 0 1 0
-3110039I08Rik 0 0 2 0 0 0 0 3
-3110039M20Rik 0 0 0 0 0 0 0 0
-3110045C21Rik 10 0 0 3 3 2 2 1
-3110056K07Rik 1 0 1 2 1 4 0 0
-3110070M22Rik 0 0 0 0 1 0 0 0
-3110099E03Rik 0 0 0 0 0 0 0 0
-3200001D21Rik 0 0 0 0 0 0 0 0
-3300005D01Rik 0 0 0 0 0 0 0 0
-3632454L22Rik 0 0 0 0 0 0 0 0
-3830408C21Rik 0 0 0 1 0 0 0 0
-3930402G23Rik 0 0 0 0 0 0 0 0
-4632415L05Rik 0 0 0 0 0 0 0 0
-4632427E13Rik 2 0 0 0 0 1 0 0
-4632428C04Rik 0 0 0 1 0 0 0 0
-4732416N19Rik 1 0 3 3 1 2 1 0
-4732471J01Rik 25 4 0 3 10 14 18 4
-4732490B19Rik 0 0 0 0 0 0 0 0
-4732491K20Rik 0 0 0 0 0 0 0 0
-4831440E17Rik 0 0 0 0 0 3 0 0
-4833411C07Rik 2 0 0 0 0 1 0 0
-4833412C05Rik 0 0 0 0 0 0 0 0
-4833417C18Rik 2 0 0 1 1 1 4 0
-4833418N02Rik 34 9 3 14 28 51 25 6
-4833419F23Rik 0 2 0 1 0 0 0 0
-4833422C13Rik 9 2 1 1 6 15 0 0
-4833427F10Rik 0 0 0 0 0 0 0 0
-4833428L15Rik 0 0 0 0 0 0 1 0
-4921504A21Rik 0 0 0 0 0 0 0 0
-4921507L20Rik 1 0 0 0 0 0 0 0
-4921508A21Rik 0 0 0 0 0 0 0 0
-4921508D12Rik 0 0 0 0 0 0 0 0
-4921509O07Rik 0 0 1 0 0 0 0 0
-4921511C10Rik 0 0 1 1 0 3 2 0
-4921511C20Rik 0 0 0 0 0 0 0 0
-4921511I17Rik 0 0 1 0 0 0 0 0
-4921513I03Rik 0 0 2 0 2 0 0 2
-4921515E04Rik 1 0 1 0 0 0 0 0
-4921524J17Rik 0 0 0 0 0 2 0 0
-4921525B02Rik 0 0 0 0 0 0 0 0
-4921525O09Rik 0 0 0 0 0 0 0 0
-4921530L18Rik 0 1 1 1 0 0 0 0
-4921531C22Rik 0 0 1 1 2 0 1 0
-4921531P14Rik 0 0 0 0 0 0 0 0
-4921533I20Rik 0 0 0 0 0 0 0 0
-4922502H24Rik 0 0 0 0 0 0 0 0
-4922502N22Rik 0 0 0 0 0 0 0 0
-4930401C15Rik 0 0 0 0 0 0 0 0
-4930401O10Rik 0 0 0 0 0 0 0 0
-4930401O12Rik 0 0 0 0 0 0 0 0
-4930402F11Rik 0 0 0 0 0 0 0 0
-4930404A05Rik 0 0 0 0 0 0 0 0
-4930404H11Rik 0 0 0 0 0 0 0 0
-4930404I05Rik 0 0 0 0 0 2 0 0
-4930405A10Rik 0 0 0 0 0 0 0 0
-4930405A21Rik 0 0 0 0 0 0 0 0
-4930405D11Rik 0 0 0 0 0 0 0 0
-4930405J17Rik 0 0 0 0 0 0 0 0
-4930405P13Rik 3 0 0 0 0 7 0 0
-4930406D18Rik 0 0 0 0 0 0 0 0
-4930412B13Rik 0 1 0 0 0 0 0 0
-4930412C18Rik 0 1 1 0 0 0 0 2
-4930412O13Rik 0 0 0 0 0 0 0 0
-4930413E15Rik 0 0 0 0 0 0 0 0
-4930413F20Rik 0 0 0 0 0 0 0 0
-4930413G21Rik 2 1 0 1 6 2 0 0
-4930413M19Rik 0 0 0 0 0 0 0 0
-4930414L22Rik 1 1 0 1 0 3 1 1
-4930414N06Rik 3 0 0 0 0 1 0 0
-4930417O13Rik 3 2 0 0 0 5 2 0
-4930417O22Rik 0 0 0 0 0 0 0 0
-4930419G24Rik 0 1 0 0 0 0 0 0
-4930423M02Rik 0 0 0 0 0 0 0 0
-4930425K10Rik 0 0 0 0 0 0 0 0
-4930425O10Rik 0 0 0 0 0 0 0 0
-4930426L09Rik 2 0 0 1 1 0 0 0
-4930428E07Rik 0 0 0 0 0 0 0 0
-4930428G15Rik 0 0 0 0 0 0 0 0
-4930428O21Rik 0 0 0 0 0 0 0 0
-4930429B21Rik 0 0 0 0 0 0 0 1
-4930429D17Rik 0 0 0 0 0 0 0 0
-4930429F11Rik 0 0 0 0 0 0 0 0
-4930429F24Rik 0 1 1 0 2 3 0 1
-4930430F21Rik 0 0 0 0 0 0 0 0
-4930430J02Rik 0 0 0 0 0 0 0 0
-4930431F12Rik 0 0 0 0 0 0 0 0
-4930431P03Rik 0 0 0 0 0 0 0 0
-4930432J09Rik 0 0 0 0 0 0 0 0
-4930433B08Rik 0 1 0 0 0 0 0 0
-4930433N12Rik 0 0 0 0 0 0 0 0
-4930434J06Rik 0 0 0 0 0 0 0 0
-4930438E09Rik 0 0 0 0 0 0 0 1
-4930440C22Rik 0 0 0 0 0 0 0 0
-4930441J16Rik 0 0 0 0 0 0 0 0
-4930441O14Rik 0 0 0 0 0 0 1 0
-4930442J19Rik 0 0 0 0 0 0 0 0
-4930442L01Rik 0 0 0 0 0 1 1 0
-4930443O20Rik 0 0 0 0 0 0 0 0
-4930444F02Rik 0 0 0 0 0 0 0 0
-4930444M15Rik 0 0 0 0 0 0 0 0
-4930447J18Rik 0 0 0 0 0 0 0 0
-4930447K03Rik 0 0 0 0 0 0 0 0
-4930447N08Rik 0 0 0 0 0 0 0 0
-4930448C13Rik 0 0 0 0 0 0 0 0
-4930448F12Rik 0 0 0 0 0 0 0 0
-4930448H16Rik 0 0 0 0 0 0 0 0
-4930448I06Rik 0 0 0 0 0 0 0 0
-4930448I18Rik 0 0 0 0 0 0 0 0
-4930448K20Rik 0 0 0 0 0 0 0 0
-4930449E01Rik 0 0 0 0 0 0 0 0
-4930449E18Rik 0 1 0 0 0 0 0 0
-4930451G09Rik 1 0 0 0 2 0 1 0
-4930452A19Rik 2 0 1 1 0 0 0 0
-4930452G13Rik 0 0 0 0 0 0 0 0
-4930452N14Rik 0 0 0 0 0 0 0 0
-4930453L07Rik 0 0 0 0 0 0 0 0
-4930455B14Rik 0 0 0 0 0 0 0 0
-4930455C13Rik 1 0 0 0 0 0 0 0
-4930455D15Rik 0 1 0 1 0 0 0 0
-4930455F16Rik 0 0 0 0 0 0 0 0
-4930455H04Rik 3 0 1 0 1 4 0 0
-4930455J16Rik 0 0 0 0 0 0 0 0
-4930456L15Rik 0 0 0 0 0 0 0 0
-4930459L07Rik 0 0 0 0 0 0 0 0
-4930461G14Rik 0 0 0 0 0 0 0 0
-4930465K10Rik 0 0 0 0 0 0 0 0
-4930465M20Rik 0 0 0 0 0 0 0 0
-4930467D21Rik 2 0 1 0 0 1 0 0
-4930467K11Rik 0 0 0 0 0 0 0 0
-4930470H14Rik 0 0 0 0 0 0 0 0
-4930470P17Rik 0 0 0 0 0 0 0 0
-4930471C04Rik 0 0 0 0 0 0 0 0
-4930471G03Rik 0 0 0 0 0 0 0 0
-4930471I20Rik 3 0 0 1 0 8 0 1
-4930471M09Rik 2 0 0 0 0 0 0 0
-4930473A02Rik 2 0 0 2 0 1 0 0
-4930473O22Rik 0 0 0 0 0 0 0 0
-4930474G06Rik 0 1 1 1 0 1 0 0
-4930474H20Rik 0 0 0 0 0 0 0 0
-4930474M22Rik 0 0 0 0 0 0 0 0
-4930474N09Rik 0 0 0 0 0 0 0 0
-4930478L05Rik 0 0 0 0 0 0 0 0
-4930478P22Rik 0 0 0 0 0 0 0 0
-4930479D17Rik 0 0 0 0 0 0 0 0
-4930479M11Rik 0 0 0 0 0 0 0 0
-4930480G23Rik 0 0 0 0 0 0 0 0
-4930480K15Rik 0 0 0 0 0 0 0 0
-4930480M12Rik 0 1 0 0 0 0 0 0
-4930481A15Rik 6 2 0 0 0 4 0 0
-4930483J18Rik 0 0 0 0 0 0 0 0
-4930483K19Rik 8 0 0 0 3 11 1 1
-4930483O08Rik 0 0 0 0 0 0 0 0
-4930486F22Rik 0 0 0 0 0 0 0 0
-4930486I03Rik 1 0 0 0 0 0 0 0
-4930487D11Rik 0 0 0 0 0 0 0 0
-4930487H11Rik 0 0 0 0 0 0 0 0
-4930488B22Rik 0 0 0 0 0 0 0 0
-4930488L21Rik 0 0 0 0 0 0 0 0
-4930500F04Rik 0 0 0 0 0 0 0 0
-4930500J02Rik 0 0 0 0 0 0 0 0
-4930500L23Rik 0 0 0 0 0 0 0 0
-4930502A04Rik 0 0 0 0 0 0 0 0
-4930502E09Rik 0 0 0 0 1 0 3 0
-4930503E24Rik 0 0 0 0 0 0 0 0
-4930503H13Rik 0 0 0 0 0 0 0 0
-4930503O07Rik 0 0 0 0 0 0 0 0
-4930505G20Rik 0 0 0 0 0 0 0 0
-4930506C21Rik 1 1 0 1 1 2 3 0
-4930507D05Rik 0 0 0 0 0 0 0 1
-4930509E16Rik 4 0 0 1 5 0 0 1
-4930509J09Rik 0 0 0 1 0 0 0 0
-4930509K18Rik 0 0 0 0 0 0 0 0
-4930511A02Rik 0 0 0 0 0 0 0 0
-4930511E03Rik 0 0 0 0 0 0 0 0
-4930511M06Rik 0 0 0 0 0 0 0 0
-4930512B01Rik 4 0 0 1 1 3 0 0
-4930513D17Rik 0 0 0 0 0 0 0 0
-4930513N10Rik 0 0 0 1 0 1 0 1
-4930515B02Rik 0 0 0 0 0 0 0 0
-4930515G01Rik 3 0 0 1 0 2 1 0
-4930515G16Rik 0 0 0 0 0 0 0 0
-4930515L03Rik 0 1 0 0 0 0 0 0
-4930515L19Rik 0 0 0 0 0 0 0 0
-4930517E11Rik 0 0 0 0 0 0 0 0
-4930518P08Rik 0 0 0 0 0 0 0 0
-4930519D14Rik 0 0 0 0 0 0 0 0
-4930519F09Rik 0 0 4 0 0 0 0 1
-4930519F24Rik 0 0 0 0 0 0 0 0
-4930519H02Rik 0 0 0 0 0 0 0 0
-4930520O04Rik 0 0 0 2 0 0 0 0
-4930520P13Rik 0 0 0 0 0 0 0 0
-4930521E06Rik 0 0 0 0 0 0 0 0
-4930522O17Rik 0 0 0 0 0 0 0 0
-4930523C07Rik 1 1 0 0 1 2 1 1
-4930523O13Rik 0 0 0 0 0 0 0 0
-4930524C18Rik 0 0 0 0 0 0 0 0
-4930524L23Rik 0 0 0 0 0 0 0 1
-4930524O05Rik 0 0 0 0 0 0 0 0
-4930524O08Rik 0 0 0 0 0 0 0 0
-4930525D18Rik 0 0 0 0 0 0 0 0
-4930525G20Rik 0 0 0 0 0 0 0 0
-4930526I15Rik 1 0 0 4 0 0 2 1
-4930526L06Rik 2 0 1 0 0 0 0 1
-4930527F14Rik 0 0 0 0 1 0 1 2
-4930527G23Rik 0 0 0 0 0 0 0 0
-4930528A17Rik 0 2 0 0 0 0 0 0
-4930528D03Rik 0 0 0 0 0 0 0 0
-4930528P14Rik 0 0 0 0 0 0 0 0
-4930529C04Rik 0 0 0 0 0 0 0 0
-4930529F24Rik 0 0 0 0 0 0 0 0
-4930529K09Rik 0 0 0 0 0 1 0 0
-4930529L06Rik 0 0 0 0 0 0 0 0
-4930533B01Rik 1 0 0 0 0 0 0 0
-4930533P14Rik 0 0 0 0 0 0 0 0
-4930539C22Rik 0 0 0 0 0 0 0 0
-4930539J05Rik 2 1 0 0 0 0 0 0
-4930539M17Rik 0 0 0 0 0 0 0 0
-4930539N22Rik 0 0 0 0 0 0 0 0
-4930540M03Rik 0 0 0 0 0 0 0 0
-4930542C21Rik 0 0 0 0 0 0 0 0
-4930542D17Rik 0 0 0 0 0 0 0 0
-4930542H20Rik 0 0 0 0 0 0 0 0
-4930543E12Rik 0 0 0 0 0 0 0 0
-4930544M13Rik 0 0 1 0 1 0 0 0
-4930545E07Rik 0 0 0 0 0 0 0 0
-4930545H06Rik 0 0 0 0 0 0 0 0
-4930545L23Rik 1 0 0 0 2 3 0 0
-4930546C10Rik 0 0 0 1 0 0 1 0
-4930546K05Rik 1 0 0 0 2 2 0 0
-4930547E08Rik 0 0 0 0 1 0 0 0
-4930547E14Rik 0 0 0 1 0 0 2 1
-4930548G14Rik 0 0 0 0 0 0 0 0
-4930548J01Rik 0 0 0 0 0 0 0 0
-4930548K13Rik 0 0 0 0 0 0 0 0
-4930549G23Rik 3 0 0 0 0 4 0 0
-4930552N02Rik 0 0 1 0 0 0 0 0
-4930552P12Rik 1 0 0 0 0 0 2 0
-4930553E22Rik 0 0 0 0 0 0 0 0
-4930554C24Rik 0 0 0 0 0 0 0 0
-4930555B11Rik 18 4 7 4 3 10 6 9
-4930556C24Rik 0 0 0 0 0 0 0 0
-4930556G01Rik 0 0 0 0 0 0 0 0
-4930556J02Rik 0 0 0 0 0 0 0 0
-4930556M19Rik 11 2 0 0 3 7 0 0
-4930556N09Rik 0 0 0 0 0 0 0 1
-4930557J02Rik 0 0 1 0 0 0 0 0
-4930558C23Rik 0 0 0 0 0 0 0 0
-4930558G05Rik 0 0 0 0 0 0 0 0
-4930558J18Rik 0 0 0 0 0 0 0 0
-4930562F07Rik 2 0 2 0 0 6 0 0
-4930563E18Rik 0 0 0 0 0 0 0 0
-4930563F08Rik 0 0 0 0 0 0 0 0
-4930563M20Rik 0 1 0 0 0 0 0 0
-4930564G21Rik 0 0 0 0 0 0 0 0
-4930564K09Rik 4 0 0 0 0 3 0 0
-4930565D16Rik 0 0 0 0 0 0 0 0
-4930565N06Rik 2 1 1 1 0 2 0 1
-4930567H12Rik 0 0 0 0 0 0 0 0
-4930567J20Rik 0 0 0 0 0 0 0 0
-4930567K20Rik 0 0 0 0 0 0 0 0
-4930568E12Rik 0 0 0 0 0 0 0 0
-4930568G15Rik 1 1 0 0 0 3 0 0
-4930568K20Rik 0 0 0 0 0 0 0 0
-4930570G19Rik 0 0 0 3 0 0 0 0
-4930572K03Rik 0 0 0 0 0 0 0 0
-4930572O03Rik 0 0 0 0 0 0 0 0
-4930572O13Rik 0 0 0 0 0 0 0 0
-4930573O16Rik 3 0 0 0 0 1 1 1
-4930577N17Rik 3 0 0 1 1 0 2 0
-4930578E11Rik 0 0 0 0 0 0 0 0
-4930578M01Rik 0 1 1 0 0 0 0 1
-4930578N18Rik 0 0 0 0 0 0 0 0
-4930579G18Rik 0 0 0 1 0 0 0 0
-4930579K19Rik 0 0 0 0 0 0 0 0
-4930581F22Rik 10 0 0 1 3 13 6 0
-4930583K01Rik 1 1 0 0 1 0 1 2
-4930583P06Rik 0 0 0 0 0 0 0 0
-4930584F24Rik 0 0 0 0 0 0 0 0
-4930590L20Rik 0 0 0 2 0 0 0 0
-4930592A05Rik 2 0 0 0 0 4 0 0
-4930592I03Rik 0 0 0 1 0 0 0 0
-4930593A02Rik 1 0 0 0 0 1 0 0
-4930593C16Rik 0 0 0 0 0 0 0 0
-4930594C11Rik 1 0 0 1 0 0 0 0
-4930596M17Rik 0 0 0 0 0 0 0 0
-4930597G03Rik 0 0 0 0 0 0 0 0
-4930598F16Rik 0 0 0 0 0 0 0 0
-4930599N23Rik 5 0 1 0 0 14 0 2
-4931402G19Rik 0 1 0 0 0 1 0 0
-4931403E22Rik 6 0 0 0 0 10 0 0
-4931403G20Rik 4 0 0 0 0 0 0 0
-4931406H21Rik 0 0 0 0 0 1 0 0
-4931408D14Rik 10 0 0 0 0 12 0 0
-4931409K22Rik 0 0 0 0 0 0 0 0
-4931419H13Rik 0 0 0 0 0 0 0 0
-4931420L22Rik 0 0 0 0 0 0 0 0
-4931428L18Rik 0 0 0 0 0 0 0 0
-4931429P17Rik 0 1 0 0 0 0 0 0
-4931430N09Rik 0 0 0 1 0 0 0 0
-4931431B13Rik 0 0 0 0 0 0 0 0
-4931431C16Rik 1 1 0 3 1 0 1 1
-4931440J10Rik 2 1 1 2 4 2 1 2
-4931440L10Rik 0 0 0 0 0 0 0 0
-4931440P22Rik 4 1 0 0 1 2 4 0
-4932412D23Rik 0 0 0 2 0 0 0 2
-4932413F04Rik 0 0 0 0 0 0 0 0
-4932414J04Rik 0 0 0 0 0 0 0 0
-4932415G12Rik 0 0 0 1 0 2 0 0
-4932415M13Rik 0 0 0 0 0 0 0 0
-4932416H05Rik 0 1 0 0 0 0 0 0
-4932435O22Rik 0 1 0 0 0 0 0 1
-4932441J04Rik 0 0 1 0 0 2 0 0
-4932702P03Rik 6 3 0 0 2 9 0 0
-4933400A11Rik 0 0 1 0 0 0 0 0
-4933400B14Rik 0 0 0 0 0 0 0 0
-4933400C23Rik 0 0 0 0 0 0 0 0
-4933400F21Rik 1 0 0 0 0 1 0 0
-4933400L20Rik 1 0 0 1 1 1 0 0
-4933401B06Rik 0 0 0 0 0 0 0 0
-4933401D09Rik 0 0 0 0 0 0 0 0
-4933401H06Rik 0 0 0 0 0 0 0 0
-4933401P06Rik 0 0 0 0 0 0 0 0
-4933402C06Rik 0 0 0 0 0 0 0 0
-4933402J10Rik 0 0 2 0 0 0 0 0
-4933402J15Rik 0 0 0 0 0 0 0 0
-4933404G15Rik 0 0 0 0 0 0 0 0
-4933404K08Rik 0 0 0 0 0 0 0 0
-4933404O12Rik 0 0 0 0 0 3 2 0
-4933405D12Rik 8 0 0 0 4 13 0 1
-4933405E24Rik 1 0 0 0 0 1 0 0
-4933406C10Rik 0 0 0 0 0 1 0 0
-4933406D12Rik 0 0 0 0 0 0 0 0
-4933406F09Rik 0 0 0 0 0 0 0 0
-4933406G16Rik 0 0 0 0 0 0 0 0
-4933406I18Rik 1 0 0 0 0 6 4 0
-4933406J10Rik 2 0 0 0 0 0 0 0
-4933406K04Rik 0 0 0 0 0 0 0 0
-4933407E24Rik 0 0 0 0 0 0 0 0
-4933407G14Rik 0 0 1 0 0 0 0 0
-4933407I05Rik 0 0 0 0 0 0 0 0
-4933407K13Rik 1 0 0 0 0 0 0 0
-4933407L21Rik 0 0 0 0 0 0 0 0
-4933408J17Rik 0 0 0 0 0 0 0 0
-4933408N05Rik 0 0 0 0 0 0 0 0
-4933409K07Rik 0 0 0 0 0 0 0 0
-4933411E08Rik 0 0 0 0 0 0 0 0
-4933411G06Rik 0 0 0 0 0 0 0 0
-4933412E12Rik 0 0 0 0 0 0 0 0
-4933412O06Rik 0 0 0 0 0 0 0 0
-4933413J09Rik 0 1 0 0 0 0 0 1
-4933413L06Rik 0 0 0 0 0 0 0 0
-4933416E03Rik 0 0 0 0 0 0 0 0
-4933416M06Rik 0 0 1 0 0 0 0 0
-4933416M07Rik 0 0 0 0 0 0 0 0
-4933417D19Rik 1 0 0 0 3 0 1 0
-4933417E11Rik 0 1 0 0 0 0 0 0
-4933417G07Rik 0 0 0 0 0 0 0 0
-4933417O13Rik 0 0 0 0 0 0 0 0
-4933421O10Rik 1 0 0 0 2 0 1 0
-4933422A05Rik 0 0 0 0 0 0 0 0
-4933424G05Rik 1 0 0 0 0 1 0 0
-4933424G06Rik 0 0 1 0 0 0 0 0
-4933425B07Rik 4 0 0 0 1 3 0 0
-4933425H06Rik 0 0 1 0 0 0 0 0
-4933426D04Rik 0 0 0 0 0 0 0 0
-4933427E11Rik 0 0 0 0 0 0 0 0
-4933427E13Rik 0 0 0 0 0 0 0 0
-4933427I22Rik 0 0 1 0 0 0 0 0
-4933428C19Rik 0 0 0 0 0 0 0 0
-4933429K18Rik 0 0 0 0 0 0 0 0
-4933429O19Rik 0 0 0 0 0 0 0 0
-4933430H16Rik 0 0 0 0 0 0 0 0
-4933430M04Rik 0 0 0 0 0 0 0 0
-4933430N04Rik 0 0 0 0 0 0 0 0
-4933431E20Rik 0 1 0 0 0 0 0 0
-4933431G14Rik 0 0 0 0 0 0 0 0
-4933432G23Rik 0 0 0 0 0 0 0 0
-4933432I03Rik 0 0 0 0 0 0 0 0
-4933432I09Rik 0 0 0 0 0 0 0 0
-4933432K03Rik 0 0 0 0 0 0 0 0
-4933433F19Rik 0 0 0 0 0 0 0 0
-4933433G15Rik 0 0 1 2 0 0 1 0
-4933433G19Rik 0 0 0 0 0 3 0 0
-4933433H22Rik 0 0 0 0 0 0 0 0
-4933436C20Rik 0 0 0 1 0 0 0 0
-4933436E23Rik 0 0 0 0 0 0 0 0
-4933436H12Rik 0 0 1 0 0 0 0 0
-4933438B17Rik 0 0 0 0 0 0 0 0
-4933438K21Rik 0 0 0 0 0 0 0 0
-4933439C10Rik 0 0 0 1 0 0 0 1
-4933439K11Rik 0 0 0 0 0 0 0 0
-4933440J02Rik 3 0 0 0 0 0 0 0
-4933440M02Rik 0 0 0 0 0 0 0 0
-5031425E22Rik 5 4 3 4 5 9 7 4
-5031425F14Rik 0 0 0 0 0 0 0 1
-5031426D15Rik 0 0 0 0 0 0 0 0
-5031434C07Rik 0 0 0 0 0 0 0 0
-5031434O11Rik 0 1 0 1 0 0 0 0
-5033403H07Rik 11 0 0 0 6 5 1 0
-5033404E19Rik 0 0 0 0 0 0 0 0
-5033406O09Rik 0 0 0 0 0 0 1 0
-5330411J11Rik 0 0 0 0 0 0 0 1
-5330413P13Rik 0 0 0 0 0 0 0 0
-5330426P16Rik 0 0 1 0 0 0 0 1
-5330434G04Rik 0 0 0 1 0 0 0 0
-5330439B14Rik 0 0 0 0 0 1 0 2
-5430402O13Rik 0 0 0 2 0 0 2 0
-5430403N17Rik 0 0 0 0 0 0 0 0
-5430405H02Rik 6 0 0 0 8 0 4 2
-5430416N02Rik 195 10 5 23 99 79 141 12
-5430416O09Rik 0 0 0 1 0 0 0 0
-5430417L22Rik 1 0 0 1 0 2 0 0
-5430421F17Rik 0 0 0 0 0 0 0 0
-5430427M07Rik 0 0 0 0 1 0 0 0
-5430428K19Rik 0 0 0 1 0 0 0 0
-5430434I15Rik 0 0 0 0 0 0 0 0
-5430437J10Rik 0 0 0 1 0 0 0 0
-5430440P10Rik 0 0 0 0 0 0 0 0
-5530401A14Rik 0 0 0 0 1 0 0 0
-5530601H04Rik 1 0 0 0 0 1 0 0
-5730403I07Rik 0 0 0 0 0 0 0 0
-5730405O15Rik 0 0 0 0 0 0 0 1
-5730408K05Rik 2 0 0 0 1 0 1 0
-5730412P04Rik 0 0 0 0 0 0 0 0
-5730416F02Rik 0 0 0 0 0 0 0 0
-5730420D15Rik 2 0 0 0 0 4 2 0
-5730422E09Rik 2 0 0 1 2 3 0 0
-5730435O14Rik 0 0 0 0 0 0 0 0
-5730457N03Rik 0 0 0 0 0 0 0 0
-5730460C07Rik 0 0 0 0 0 0 0 0
-5730480H06Rik 1 0 0 0 0 0 0 0
-5730488B01Rik 0 0 0 0 0 0 0 0
-5730522E02Rik 4 0 0 1 1 5 1 0
-5730577I03Rik 0 0 0 0 0 2 0 0
-5830403M04Rik 0 0 0 0 0 0 0 0
-5830416I19Rik 0 0 0 0 0 0 0 0
-5830416P10Rik 0 1 0 0 0 1 0 0
-5830417I10Rik 0 1 0 0 0 1 0 1
-5830418P13Rik 0 0 0 1 0 0 0 0
-5830428M24Rik 0 0 0 0 0 0 0 0
-5830432E09Rik 0 0 0 0 0 0 0 0
-5830444B04Rik 0 0 0 0 0 0 0 0
-5830454E08Rik 1 0 0 0 0 0 0 0
-5930403L14Rik 0 0 0 0 0 0 0 1
-5930412G12Rik 0 0 0 0 0 0 0 0
-5930430L01Rik 0 0 2 0 0 6 6 4
-5930438M14Rik 0 0 0 0 0 0 0 0
-6030407O03Rik 0 0 0 2 0 0 0 1
-6030408B16Rik 0 0 0 0 0 0 0 0
-6030440G07Rik 0 0 0 0 0 1 0 0
-6030443J06Rik 0 0 0 0 0 0 0 0
-6030466F02Rik 0 0 0 0 0 0 0 0
-6030469F06Rik 0 0 0 0 0 0 0 0
-6230400D17Rik 0 0 0 0 0 0 0 0
-6330407A03Rik 0 0 0 0 0 0 0 0
-6330410L21Rik 0 0 0 0 0 0 0 0
-6330415B21Rik 0 0 0 0 0 0 0 0
-6330418K02Rik 0 0 0 1 0 0 0 0
-6330549D23Rik 2 1 1 1 2 0 1 1
-6430411K18Rik 0 1 2 5 0 0 0 9
-6430562O15Rik 0 0 0 0 0 2 0 0
-6430584L05Rik 0 0 0 0 0 0 0 0
-6430706D22Rik 0 0 0 0 0 0 0 0
-6430710C18Rik 0 0 0 0 0 1 0 0
-6530402F18Rik 1 0 0 0 1 0 0 0
-6530411M01Rik 0 0 0 0 0 0 0 0
-6720401G13Rik 0 0 0 0 0 8 0 1
-6720468P15Rik 0 0 0 0 0 0 0 0
-6720483E21Rik 2 2 1 1 3 0 3 0
-6820431F20Rik 0 0 0 0 0 0 0 0
-7420700N18Rik 0 0 0 0 0 0 0 0
-7420701I03Rik 0 0 0 0 0 0 0 0
-7530420F21Rik 0 0 0 0 0 0 0 0
-7630403G23Rik 0 0 0 0 0 0 0 0
-8030423F21Rik 0 0 0 0 0 0 0 0
-8030442B05Rik 0 0 0 0 0 0 1 0
-8030443G20Rik 0 0 0 0 0 0 0 0
-8430403D17Rik 1 1 0 0 0 0 0 0
-8430422H06Rik 0 0 0 0 0 0 0 0
-8430423G03Rik 0 0 0 0 0 0 0 0
-8430426J06Rik 0 0 0 1 0 0 0 0
-8430429K09Rik 7 0 0 3 0 1 0 0
-8430431K14Rik 0 0 0 0 0 0 0 0
-8430436N08Rik 0 0 0 0 0 0 0 0
-8430437L04Rik 0 0 0 0 0 0 0 0
-9030204H09Rik 0 0 0 0 0 0 0 0
-9030404E10Rik 0 1 0 0 1 0 1 0
-9030612E09Rik 0 0 1 0 0 0 0 0
-9130015A21Rik 0 0 0 0 0 0 0 0
-9130015L21Rik 0 0 0 0 0 0 0 0
-9130019P16Rik 5 0 2 0 3 8 2 0
-9130024F11Rik 2 0 0 0 0 0 0 0
-9130206I24Rik 0 0 0 0 0 0 0 0
-9130209A04Rik 0 1 0 0 0 0 0 0
-9130221F21Rik 0 0 0 0 0 0 0 0
-9130221H12Rik 1 0 0 1 0 4 0 0
-9130227L01Rik 0 0 0 0 0 0 0 0
-9130230L23Rik 0 0 0 0 0 0 0 0
-9230009I02Rik 0 0 0 0 0 0 0 0
-9230102K24Rik 0 0 0 0 0 0 0 0
-9230102O04Rik 0 0 0 0 0 0 0 0
-9230105E05Rik 0 0 0 0 0 0 0 0
-9230112J17Rik 0 0 0 4 0 0 0 0
-9230114K14Rik 0 0 2 0 1 0 0 0
-9230115E21Rik 0 1 0 1 0 0 0 0
-9230116N13Rik 0 0 0 0 1 2 1 0
-9330020H09Rik 3 1 0 0 0 1 0 1
-9330102E08Rik 0 0 0 0 0 0 0 0
-9330111N05Rik 0 0 0 0 0 0 0 0
-9330117O12Rik 0 0 0 0 0 0 0 0
-9330133O14Rik 5 0 0 0 0 0 1 0
-9330151L19Rik 0 0 0 0 0 3 1 0
-9330158H04Rik 0 0 0 0 0 0 1 0
-9330159M07Rik 0 0 0 0 0 0 0 0
-9330162012Rik 6 0 0 0 1 2 0 1
-9330162B11Rik 0 0 0 0 0 0 0 0
-9330175E14Rik 0 1 0 0 1 0 0 0
-9330175M20Rik 1 2 2 2 0 0 1 1
-9330178D15Rik 0 1 3 0 0 1 0 0
-9330179D12Rik 0 6 6 7 3 3 6 9
-9330188P03Rik 0 0 0 0 0 0 0 0
-9430008C03Rik 8 2 0 0 1 10 3 2
-9430014N10Rik 0 0 0 0 0 0 0 0
-9430018G01Rik 2 0 0 0 0 0 0 0
-9430019J16Rik 0 0 0 0 0 0 0 0
-9430021M05Rik 0 0 0 0 0 0 0 0
-9430037G07Rik 0 0 0 0 0 0 0 0
-9430041J12Rik 0 0 0 0 0 0 0 0
-9430060I03Rik 4 3 0 0 1 1 1 0
-9430076C15Rik 0 0 1 1 0 0 0 0
-9430076G02Rik 0 0 0 0 0 0 0 0
-9430083A17Rik 3 0 0 0 0 3 1 0
-9430091E24Rik 10 2 2 2 0 16 6 4
-9530026F06Rik 0 1 0 0 0 0 0 0
-9530026P05Rik 0 3 4 4 1 4 0 4
-9530027J09Rik 0 0 0 1 0 1 0 0
-9530036O11Rik 0 3 1 1 0 0 0 1
-9530048J24Rik 0 0 0 0 0 0 0 0
-9530051G07Rik 0 0 0 0 0 0 0 0
-9530052E02Rik 2 1 1 1 1 2 2 1
-9530059O14Rik 0 0 0 0 0 0 0 0
-9530080O11Rik 2 0 0 0 1 2 0 0
-9530082P21Rik 0 0 0 0 0 3 0 1
-9530091C08Rik 1 1 0 1 0 0 0 0
-9630001P10Rik 0 0 0 0 0 0 0 0
-9630013A20Rik 0 0 0 0 0 0 0 0
-9630028B13Rik 0 0 0 0 0 2 1 0
-9630028H03Rik 0 0 0 0 0 0 0 0
-9830132P13Rik 0 0 0 0 0 0 1 0
-9830166K06Rik 0 0 0 0 0 0 0 0
-9930014A18Rik 1 0 0 1 0 3 1 2
-A030009H04Rik 0 0 0 0 0 0 0 0
-A130049A11Rik 2 0 0 1 0 5 0 0
-A130077B15Rik 0 0 0 0 0 0 0 0
-A230001M10Rik 0 0 0 0 0 0 0 0
-A230009B12Rik 0 0 1 0 0 0 0 0
-A230020J21Rik 2 1 0 1 1 0 1 2
-A230028O05Rik 0 0 0 1 0 0 0 0
-A230056J06Rik 0 0 0 0 0 0 0 0
-A230056P14Rik 0 0 0 1 0 0 0 0
-A230057D06Rik 0 0 0 2 0 0 0 1
-A230070E04Rik 0 0 0 0 0 0 0 0
-A230072C01Rik 0 0 0 0 0 2 0 0
-A230072E10Rik 0 0 0 0 0 0 1 0
-A230073K19Rik 0 1 1 0 0 0 0 1
-A230077H06Rik 0 0 0 2 0 0 0 0
-A230108P19Rik 6 0 1 1 1 9 2 1
-A330009N23Rik 0 2 0 4 0 0 0 0
-A330023F24Rik 1086 659 583 1482 625 255 739 674
-A330032B11Rik 4 0 0 2 1 1 1 0
-A330033J07Rik 0 0 1 1 0 0 0 0
-A330035P11Rik 0 0 1 0 6 4 0 0
-A330040F15Rik 1 0 0 0 1 0 0 0
-A330041J22Rik 1 0 0 0 0 0 1 0
-A330048O09Rik 0 0 0 0 0 0 0 0
-A330049N07Rik 0 0 0 1 0 0 0 0
-A330050B17Rik 0 0 0 0 0 0 0 0
-A330069E16Rik 0 0 0 0 0 0 2 0
-A330076C08Rik 0 0 0 0 0 0 0 0
-A330076H08Rik 0 0 0 0 0 0 0 0
-A330093E20Rik 3 1 1 0 0 3 0 1
-A330102I10Rik 0 0 0 0 0 0 0 0
-A430035B10Rik 0 0 0 0 0 0 0 0
-A430071A18Rik 0 0 0 0 0 2 0 2
-A430088P11Rik 0 0 0 0 0 0 0 0
-A430090L17Rik 0 0 0 0 0 0 0 0
-A430092G05Rik 0 0 0 0 0 0 0 0
-A430093F15Rik 0 1 1 1 0 1 0 0
-A530006G24Rik 0 0 0 0 0 0 0 0
-A530013C23Rik 8 0 0 0 4 0 2 0
-A530046M15Rik 0 0 0 0 0 0 0 0
-A530050N04Rik 0 0 0 0 0 0 0 0
-A530053G22Rik 0 0 0 0 0 0 0 0
-A530058N18Rik 0 0 0 0 0 0 0 0
-A530065N20Rik 1 0 0 0 0 0 1 1
-A530072M11Rik 2 0 0 0 0 0 0 1
-A530088E08Rik 0 0 0 0 0 0 0 0
-A630010A05Rik 5 2 6 5 1 0 3 2
-A630012P03Rik 2 0 0 0 0 0 0 0
-A630019I02Rik 0 3 1 4 0 0 1 3
-A630020A06 0 0 0 0 1 0 0 0
-A630023P12Rik 0 0 0 0 0 0 0 0
-A630066F11Rik 1 0 0 0 1 1 2 0
-A630072M18Rik 5 1 0 2 6 2 3 1
-A630075F10Rik 0 0 0 0 0 0 0 0
-A630077J23Rik 0 0 0 0 0 0 0 0
-A630089N07Rik 0 0 0 1 0 0 0 0
-A730017C20Rik 0 0 0 0 0 0 0 0
-A730017L22Rik 7 1 0 0 3 10 0 0
-A730018C14Rik 0 0 0 0 0 0 0 0
-A730020E08Rik 0 0 0 0 0 0 0 0
-A730020M07Rik 1 0 0 0 0 3 0 0
-A730036I17Rik 0 0 0 0 1 0 0 0
-A730043L09Rik 0 0 0 0 0 0 0 0
-A730046J19Rik 0 0 0 0 0 0 0 0
-A730056A06Rik 0 0 4 2 0 0 0 0
-A730082K24Rik 0 0 0 0 0 0 0 0
-A730085A09Rik 0 0 0 0 0 0 0 0
-A730085K08Rik 0 0 0 0 0 0 0 0
-A730090H04Rik 0 0 0 0 0 0 0 0
-A730090N16Rik 0 0 0 0 0 0 0 0
-A730098P11Rik 0 0 0 0 0 0 0 0
-A830009L08Rik 0 0 0 1 0 0 0 1
-A830019L24Rik 0 0 0 0 0 0 0 0
-A830052D11Rik 1 0 0 0 0 2 0 0
-A830082K12Rik 0 1 1 0 0 0 0 0
-A830082N09Rik 0 0 0 0 0 0 1 0
-A930001A20Rik 0 0 0 0 0 0 0 0
-A930001C03Rik 2 0 0 0 0 0 0 0
-A930003A15Rik 0 0 0 0 0 0 0 0
-A930003O13Rik 0 0 0 0 0 0 0 0
-A930004D18Rik 0 1 0 0 1 0 0 0
-A930005H10Rik 3 0 0 2 3 0 6 0
-A930006I01Rik 1 2 4 2 1 4 0 0
-A930006K02Rik 0 0 0 0 0 0 0 0
-A930007I19Rik 0 0 0 0 0 0 0 0
-A930011G23Rik 2 2 1 0 1 1 2 3
-A930011O12Rik 0 0 0 0 0 0 0 0
-A930012L18Rik 0 1 0 0 0 0 0 0
-A930013F10Rik 0 0 0 0 0 0 0 0
-A930015D03Rik 7 5 2 2 1 3 2 0
-A930016O22Rik 0 0 0 8 0 2 4 6
-A930017M01Rik 0 0 0 0 0 0 0 0
-A930019D19Rik 1 0 0 0 0 0 0 0
-A930024E05Rik 0 0 0 0 0 0 0 0
-A930041C12Rik 0 0 0 0 0 0 0 0
-AA387883 0 0 0 0 0 0 0 0
-AA388235 0 0 0 0 0 0 0 0
-AA413626 0 0 0 0 0 0 0 0
-AA465934 9 1 0 2 0 0 0 3
-AA474331 1 0 0 0 0 0 0 0
-AA536875 0 0 0 0 0 0 0 0
-AA543186 0 0 0 0 0 0 0 0
-AA543401 0 0 0 0 0 0 0 0
-AA545190 0 0 0 0 0 0 0 0
-AA619741 0 0 0 0 0 0 0 0
-AF357355 0 0 1 0 0 0 0 0
-AF357359 10 9 1 23 4 2 0 6
-AF357399 18 4 3 4 12 26 17 5
-AF357425 1 2 1 1 1 1 2 2
-AF357426 3 0 0 3 1 0 0 0
-AI115009 0 0 0 0 0 0 0 0
-AI197445 0 0 0 0 0 0 0 0
-AI314278 0 0 0 0 0 0 0 0
-AI314831 0 0 0 0 0 1 0 0
-AI414108 0 0 0 0 0 0 0 0
-AI427809 0 2 0 0 0 0 0 0
-AI450353 8 1 0 1 0 0 0 2
-AI463170 0 0 0 0 0 0 0 0
-AI504432 0 0 1 0 0 0 0 0
-AI506816 4 0 0 0 2 4 2 0
-AI507597 0 0 0 0 0 2 0 0
-AI606473 0 0 0 0 0 0 0 0
-AI646519 0 0 0 0 0 0 0 0
-AI662270 0 0 0 0 0 0 0 0
-AI839979 0 0 0 0 0 0 0 0
-AI847159 0 0 0 0 0 0 0 0
-AI854517 0 0 0 0 0 0 0 0
-AI854703 0 0 0 0 0 0 0 0
-AU015791 0 0 0 0 0 0 0 0
-AU015836 0 0 0 0 0 0 0 0
-AU016765 0 0 0 0 0 0 0 0
-AU019990 0 0 0 0 0 0 0 2
-AU021063 0 0 0 0 0 0 0 0
-AU022754 0 0 0 0 0 0 0 0
-AU022793 0 0 0 0 0 0 0 0
-AU023762 0 0 0 0 0 0 0 0
-AU040972 0 0 0 0 0 1 0 0
-AV039307 4 0 0 0 0 14 0 0
-AV051173 1 0 0 0 0 0 0 0
-AW011738 0 0 0 0 3 2 1 0
-AW046200 0 0 0 1 0 0 0 0
-AW112010 9 1 0 1 0 21 2 0
-AW495222 36 0 0 0 0 63 1 1
-AW549542 0 0 0 0 0 0 0 0
-AY512915 0 0 0 0 0 0 0 0
-AY512931 1 0 0 0 1 0 1 0
-Aanat 1 0 0 0 0 0 0 0
-Abca16 0 0 0 0 0 0 0 0
-Abhd1 5 0 0 0 0 7 1 0
-Abhd10 1 1 1 0 0 1 1 1
-Abhd11 0 0 0 2 2 2 2 0
-Adam17 8 0 2 1 1 5 3 2
-Adam28 0 1 0 0 0 0 0 0
-Adamts10 0 0 0 2 4 4 0 0
-Adarb1 6 2 0 2 0 2 0 2
-Adck5 1 0 0 1 2 1 0 1
-Adh6-ps1 1 0 0 0 0 1 1 0
-Adhfe1 11 2 0 0 2 6 4 0
-Aes 41 1 1 5 1 59 3 2
-Afg3l1 7 0 2 3 0 10 4 1
-Ager 0 0 0 0 0 0 0 0
-Ahsg 586 0 1 0 18 879 40 0
-Aire 0 0 0 0 0 0 0 0
-Airn 0 4 18 12 0 20 0 12
-Alg11 7 0 0 0 0 3 1 1
-Alg13 1 0 0 0 0 2 0 0
-Alg9 2 1 1 0 0 6 0 0
-Alms1-ps2 0 0 0 0 0 0 0 0
-Angel2 10 0 0 0 2 14 0 2
-Ank1 1580 5230 5544 7926 1242 4010 3128 5116
-Ankrd10 8 0 0 0 3 2 2 3
-Ankrd11 25 5 1 7 6 38 2 2
-Ankzf1 7 5 0 0 0 4 2 0
-Ano4 1 6 0 2 0 1 0 2
-Ano5 0 0 0 0 0 0 1 0
-Apol7d 2 0 0 0 0 2 1 0
-Apoo-ps 0 0 0 0 1 0 0 0
-Aqp9 44 0 0 0 2 107 8 0
-Arfrp1 3 0 0 0 0 4 0 0
-Arhgap1 6 3 3 0 0 6 0 0
-Arid5a 1 0 0 1 0 0 0 0
-Arrdc1 0 0 0 0 0 3 0 0
-Art2a-ps 0 0 0 0 0 0 0 0
-Asb7 3 0 0 1 0 3 0 0
-Asmt 0 0 0 0 0 0 0 0
-Atf5 17 0 0 0 1 27 5 0
-Atp10d 7 2 0 0 0 7 0 1
-Atp2a2 38 74 84 78 2 48 2 68
-Atp6v0c-ps2 0 0 0 0 0 0 1 0
-B020014A21Rik 0 0 0 0 0 0 0 0
-B020018J22Rik 0 0 0 0 0 0 0 0
-B130006D01Rik 0 0 0 0 0 0 0 1
-B130024G19Rik 0 1 1 0 1 0 0 0
-B130034C11Rik 0 0 0 0 0 0 0 0
-B230119M05Rik 0 0 0 0 0 0 0 0
-B230206H07Rik 4 0 0 0 0 1 2 0
-B230208H11Rik 24 20 18 52 28 26 44 38
-B230209E15Rik 0 0 0 0 0 0 0 0
-B230209K01Rik 0 0 0 0 0 0 0 0
-B230214G05Rik 0 0 1 0 0 0 0 0
-B230216N24Rik 0 0 0 0 0 0 0 0
-B230217O12Rik 1 0 0 1 0 1 5 1
-B230312C02Rik 0 0 0 1 0 0 0 0
-B230319C09Rik 1 1 1 0 0 1 0 0
-B230323A14Rik 0 0 0 0 0 0 0 0
-B230378P21Rik 0 0 0 0 0 0 0 0
-B330016D10Rik 1 1 1 4 0 0 0 1
-B430010I23Rik 3 0 0 0 0 2 1 0
-B430212C06Rik 0 0 0 1 0 0 0 0
-B430319G15Rik 0 3 1 2 0 0 0 0
-B4galnt1 0 0 1 1 0 1 0 0
-B4galt2 0 0 0 1 0 0 0 0
-B630019K06Rik 1 0 0 2 0 2 2 0
-B830017H08Rik 0 3 3 0 0 0 0 2
-B930003M22Rik 1 1 0 0 0 0 0 0
-B930018H19Rik 0 0 0 0 0 0 0 0
-B930025P03Rik 0 0 0 0 2 0 0 1
-B930059L03Rik 1 0 0 0 0 0 0 0
-B930092H01Rik 0 0 0 0 0 0 0 0
-BB014433 0 0 0 0 0 0 0 0
-BB019430 0 0 0 0 0 0 0 0
-BB031773 0 0 0 0 0 0 0 0
-BB123696 2 0 0 1 0 0 1 0
-BB283400 0 0 1 1 0 4 0 0
-BB557941 0 0 0 0 0 0 0 0
-BC002163 1 0 0 0 0 1 0 1
-BC005764 0 1 0 0 0 0 0 0
-BC006965 0 1 0 0 0 0 0 0
-BC018473 0 0 0 0 0 0 0 0
-BC020402 0 0 0 0 1 0 0 0
-BC021767 0 0 0 0 0 0 0 0
-BC024386 20 0 0 0 1 14 0 0
-BC024582 4 1 0 0 2 2 1 0
-BC025920 1 0 0 0 0 0 0 0
-BC029722 4 0 0 0 0 1 0 0
-BC030870 0 0 0 0 0 0 0 0
-BC031361 2 0 0 0 0 1 1 0
-BC033916 0 0 0 0 0 0 0 0
-BC037032 0 0 0 0 0 0 0 1
-BC037704 0 0 0 0 1 1 0 0
-BC039771 4 0 1 0 0 2 0 0
-BC039966 0 0 0 0 0 0 0 0
-BC048602 0 0 0 0 0 0 0 0
-BC051226 0 0 1 0 0 0 0 0
-BC051537 0 0 0 0 0 0 0 0
-BC052688 0 0 0 0 0 0 0 0
-BC055402 0 0 0 0 0 0 0 0
-BC064078 0 0 0 0 0 0 0 0
-BC065397 0 0 0 2 0 0 0 0
-BC090627 7 4 12 6 1 2 6 9
-Bambi-ps1 1 0 0 0 0 0 1 0
-Bc1 317 51 44 52 53 387 86 44
-Bend5 1 0 0 0 0 0 0 0
-Best2 0 0 0 0 0 0 0 0
-Bmp1 13 0 1 1 3 18 3 0
-Brat1 1 0 0 0 0 3 1 1
-Brd2 15 4 4 7 2 10 10 0
-Btbd19 0 1 0 0 2 0 0 1
-Btnl5 0 0 0 0 0 0 0 0
-C030007H22Rik 0 0 0 0 0 0 0 0
-C030013G03Rik 0 0 0 0 0 0 0 0
-C030016D13Rik 3 1 0 0 1 0 1 0
-C030018K13Rik 0 0 0 0 0 0 0 0
-C030023E24Rik 0 0 0 0 0 0 0 0
-C030029H02Rik 0 0 0 0 0 1 0 0
-C030034I22Rik 0 0 0 1 0 0 1 0
-C030034L19Rik 0 0 0 0 0 0 0 0
-C030037D09Rik 4 0 0 0 0 2 1 0
-C130021I20Rik 0 0 0 0 0 0 0 0
-C130026L21Rik 0 0 0 0 0 0 0 0
-C130030K03Rik 0 1 0 0 0 0 0 0
-C130036L24Rik 0 0 0 0 0 0 0 0
-C130046K22Rik 0 5 3 2 3 0 0 0
-C130060C02Rik 0 0 0 0 0 0 0 0
-C130071C03Rik 0 0 0 0 0 0 0 0
-C130080G10Rik 0 0 1 2 0 0 0 2
-C130083M11Rik 0 0 0 0 0 3 0 0
-C230004F18Rik 0 0 0 0 0 0 0 0
-C230024C17Rik 0 0 0 0 0 0 0 0
-C230035I16Rik 0 0 0 0 0 0 0 0
-C230037L18Rik 1 0 1 0 0 1 2 0
-C230079O03Rik 0 0 0 0 0 0 0 0
-C230091D08Rik 5 0 2 0 0 9 0 1
-C330008G21Rik 0 0 0 0 0 0 0 0
-C330011F03Rik 0 1 0 0 0 0 0 0
-C330013E15Rik 1 0 0 1 0 0 4 2
-C330013F16Rik 0 0 0 0 0 0 0 0
-C330022C24Rik 6 0 0 0 0 9 0 0
-C330024C12Rik 0 0 0 0 0 0 0 0
-C330024D21Rik 0 0 0 0 0 0 0 0
-C330046G13Rik 0 0 0 0 0 0 1 0
-C430002E04Rik 0 0 0 0 1 0 1 0
-C430002N11Rik 0 0 0 0 0 0 0 0
-C430049B03Rik 1996 4438 3666 7206 1654 824 1948 3984
-C4bp-ps1 0 0 0 0 0 1 0 0
-C530005A16Rik 5 0 1 0 1 4 3 1
-C530044C16Rik 0 0 0 0 0 0 0 0
-C630020P19Rik 0 0 0 0 0 0 0 0
-C630028M04Rik 0 0 0 0 0 0 0 0
-C630031E19Rik 0 0 0 0 0 0 0 0
-C630043F03Rik 0 0 0 0 1 2 0 0
-C730002L08Rik 1 0 0 1 0 2 0 1
-C730027H18Rik 1 0 0 0 1 3 0 0
-C730036E19Rik 6 0 0 0 0 3 0 0
-C86187 0 0 0 0 0 0 0 0
-C87198 0 0 0 0 0 0 0 0
-C87499 0 0 0 0 0 0 0 0
-C920006O11Rik 0 0 0 1 0 1 1 0
-C920009B18Rik 0 0 0 0 0 0 0 0
-C920021L13Rik 6 0 2 2 1 10 9 2
-Cacnb2 0 3 1 2 0 0 0 1
-Cbwd1 0 0 1 0 0 0 0 0
-Ccdc11 1 1 0 0 0 0 2 0
-Ccdc77 2 1 0 0 3 0 0 1
-Ccl25 1 0 0 0 1 4 2 0
-Cd1d2 0 0 0 0 0 0 0 0
-Cd22 0 0 0 0 0 2 0 2
-Cd40 0 1 0 3 0 0 0 0
-Cdh23 2 0 0 4 2 3 1 2
-Cdk3-ps 0 0 0 0 0 0 0 0
-Ceacam-ps1 0 0 0 0 0 0 0 0
-Cenpk 0 0 0 0 0 0 0 1
-Cep57 0 1 0 0 0 5 2 0
-Ces2d-ps 0 0 0 0 0 0 0 0
-Chka 9 0 0 0 1 9 1 0
-Chkb 14 2 2 2 2 4 0 2
-Chpt1 22 1 3 8 0 25 0 2
-Cldn25 2 0 0 0 0 8 2 0
-Clip4 0 1 4 2 0 0 0 3
-Clk1 16 6 0 8 0 18 6 0
-Cnot2 11 0 2 2 0 5 0 1
-Cops5 8 1 0 1 0 8 0 0
-Cox18 4 0 0 0 1 1 0 0
-Crebzf 21 3 0 0 3 6 9 6
-Crem 5 0 0 1 2 3 5 0
-Crxos1 0 1 0 0 0 0 0 0
-Csf3r 0 0 0 0 0 0 0 0
-Ctc1 0 0 1 1 0 1 0 0
-Ctps2 2 0 0 0 0 1 0 0
-Cts8-ps 0 0 0 0 0 0 0 0
-Cxcl11 0 0 0 0 0 0 0 0
-Cyp2c53-ps 0 0 0 0 0 1 0 0
-Cyp2d13 19 0 0 0 1 20 4 0
-Cyp2d37-ps 2 0 0 0 0 2 0 0
-Cyp3a25 76 0 0 0 30 93 27 0
-Cyp4f41-ps 0 0 0 2 1 2 0 0
-D030018L15Rik 0 0 0 0 0 0 0 0
-D030024E09Rik 0 0 0 0 0 0 0 0
-D030025E07Rik 0 0 0 0 0 0 0 0
-D030025P21Rik 0 1 0 0 0 0 0 1
-D030028A08Rik 1 0 0 0 0 5 0 0
-D030040B21Rik 0 0 0 0 0 0 0 0
-D030045P18Rik 0 0 0 0 0 0 0 0
-D030047H15Rik 0 0 0 0 0 0 0 0
-D130009I18Rik 6 0 0 3 5 1 0 0
-D130017N08Rik 0 0 0 0 0 1 0 0
-D130020L05Rik 8 4 4 0 12 16 8 0
-D130058E03 0 0 0 0 0 0 0 0
-D16Ertd519e 0 0 0 0 0 0 0 0
-D17Ertd648e 0 0 0 1 0 0 0 0
-D230030E09Rik 0 0 0 0 0 0 0 0
-D330022K07Rik 13 6 10 3 1 17 2 4
-D330023K18Rik 0 0 1 0 0 0 2 0
-D330041H03Rik 7 1 0 0 0 12 0 0
-D330050G23Rik 0 2 0 0 0 0 0 0
-D330050I16Rik 3 0 0 1 2 1 4 0
-D430020J02Rik 0 0 0 0 0 1 0 0
-D430036J16Rik 0 0 0 0 0 0 0 0
-D4Ertd617e 0 0 0 0 0 1 0 0
-D530049I02Rik 0 0 0 0 0 0 0 0
-D5Ertd605e 0 0 0 0 0 0 1 0
-D630010B17Rik 0 0 0 0 0 0 0 0
-D630013N20Rik 0 0 0 0 0 0 0 0
-D630024D03Rik 0 0 0 0 0 0 8 0
-D630029K05Rik 0 0 0 0 0 0 0 0
-D630032N06Rik 0 0 0 1 0 0 0 0
-D630041G03Rik 0 0 0 0 0 0 0 0
-D630045M09Rik 0 0 0 0 0 0 0 0
-D6Ertd474e 0 0 0 0 0 0 0 0
-D730001G18Rik 0 0 0 0 0 0 0 0
-D730005E14Rik 0 0 0 1 0 0 0 0
-D730045A05Rik 0 0 0 0 0 0 0 0
-D730050B12Rik 0 0 0 0 0 0 0 0
-D7Ertd143e 36 0 0 0 16 9 12 0
-D7Ertd715e 0 0 0 0 0 0 0 0
-D830005E20Rik 0 3 2 3 0 0 0 1
-D830013O20Rik 0 0 1 0 0 0 0 0
-D830015G02Rik 0 3 5 2 0 0 1 8
-D830026I12Rik 0 0 0 0 0 0 0 2
-D830032E09Rik 0 2 0 0 0 0 0 0
-D830046C22Rik 1 0 0 1 0 0 0 0
-D930007P13Rik 0 0 0 0 0 0 0 0
-D930015M05Rik 6 0 1 1 1 9 1 1
-D930016D06Rik 3 1 0 0 0 3 0 0
-D930028M14Rik 0 0 0 0 0 0 0 0
-D930032P07Rik 0 1 0 0 0 0 0 0
-D930048N14Rik 0 0 0 0 0 1 0 0
-DQ267100 0 0 0 0 0 2 0 0
-DQ267101 0 0 0 0 0 0 0 0
-DQ267102 0 0 0 0 0 0 0 0
-Dancr 20 0 2 5 2 12 3 4
-Dand5 1 0 0 0 1 0 0 0
-Daw1 0 1 0 0 0 0 0 0
-Dcaf11 31 1 1 0 6 57 8 1
-Dctd 0 1 0 0 0 0 0 0
-Deaf1 3 0 2 1 1 7 0 0
-Def8 5 0 0 0 1 9 1 0
-Defa-ps1 0 0 0 0 0 0 0 0
-Defa-ps12 0 0 0 0 0 0 0 0
-Defa-ps13 0 0 0 0 0 0 0 0
-Defb44-ps 0 0 0 0 0 0 0 0
-Dennd2d 1 0 0 0 0 5 0 0
-Dgkh 0 1 0 1 1 0 0 0
-Dio3os 1 1 2 0 0 2 2 1
-Dleu2 868 334 292 862 639 289 781 334
-Dlg1 11 2 2 6 1 18 3 2
-Dlk1 0 0 0 0 0 0 0 0
-Dlx1as 0 0 0 0 0 0 0 0
-Dlx6as1 0 0 0 0 0 0 0 0
-Dlx6as2 0 0 0 0 0 0 0 0
-Dmr 8 0 0 0 0 0 7 0
-Dnajc24 2 0 0 1 0 2 1 2
-Dnajc5 7 1 0 2 1 12 1 0
-Dnm1l 6 0 2 3 0 15 0 0
-Dnm3os 53 242 213 490 36 20 40 307
-Dos 2 0 0 0 0 0 1 1
-Dtnb 8 0 2 0 0 16 0 0
-E030003E18Rik 3 0 0 1 0 3 0 1
-E030011O05Rik 0 1 0 1 0 0 0 0
-E030013I19Rik 0 0 0 0 0 1 0 0
-E030019B13Rik 0 0 0 0 0 0 0 0
-E030024N20Rik 0 0 0 0 0 0 0 0
-E030025P04Rik 0 0 0 0 0 0 0 0
-E030044B06Rik 0 1 0 0 0 0 0 0
-E130006D01Rik 0 0 0 0 0 0 0 0
-E130008D07Rik 0 0 0 0 0 0 0 0
-E130018N17Rik 1 0 0 0 0 0 0 0
-E130102H24Rik 3055 1463 1381 4975 2064 3018 2188 1558
-E130112N10Rik 0 0 1 1 0 1 0 0
-E130114P18Rik 0 0 0 0 0 0 0 0
-E130201H02Rik 0 0 0 0 0 0 0 0
-E130215H24Rik 0 0 0 0 0 0 0 0
-E130218I03Rik 0 0 0 0 0 0 0 0
-E130304I02Rik 0 0 0 0 0 0 0 0
-E130307A14Rik 0 0 1 3 0 1 2 1
-E130310I04Rik 0 0 0 0 0 2 0 0
-E130317F20Rik 3 0 0 1 2 2 0 1
-E230016K23Rik 0 2 4 0 0 0 0 0
-E230016M11Rik 0 1 0 1 1 2 0 0
-E230029C05Rik 0 0 0 0 1 0 0 0
-E2f6 8 2 0 1 0 5 0 0
-E330011O21Rik 0 0 0 0 0 0 0 0
-E330012B07Rik 0 0 0 0 0 0 0 0
-E330013P04Rik 1 0 0 0 0 0 0 0
-E330017L17Rik 0 0 0 0 0 0 0 0
-E330020D12Rik 0 0 0 0 1 1 0 0
-E330023G01Rik 0 0 0 0 0 0 0 0
-E330033B04Rik 0 0 0 0 0 0 0 0
-E430016F16Rik 0 2 0 1 0 0 0 3
-E530001F21Rik 0 0 0 0 0 0 0 0
-E530011L22Rik 3 0 0 1 0 0 0 0
-Eci2 25 0 0 0 3 41 0 0
-Efcab8 0 0 0 0 0 0 0 0
-Elmo1 0 1 2 2 0 0 1 0
-Elp3 10 17 7 2 1 3 1 14
-Emx2os 0 0 0 0 0 0 0 0
-Enoph1 0 0 0 0 1 0 0 0
-Etd 0 0 0 0 0 0 0 0
-Etfb 20 0 1 1 2 29 0 0
-Etohd2 2 0 1 0 0 3 0 0
-F420014N23Rik 8 0 2 4 0 8 0 0
-F630028O10Rik 119 98 109 214 103 53 139 93
-F630042J09Rik 0 0 0 0 0 1 0 0
-F630111L10Rik 0 0 0 0 0 0 0 0
-F630206G17Rik 1 0 0 0 0 3 0 0
-F730035M05Rik 2 0 0 1 5 6 2 1
-F730043M19Rik 0 0 0 0 0 0 0 1
-F830002L21Rik 0 0 0 0 0 0 0 0
-F930015N05Rik 0 0 0 0 0 0 1 0
-Fam120aos 1 0 0 0 0 2 1 0
-Fam120b 16 0 0 2 4 15 2 0
-Fam172a 8 1 1 3 1 7 0 2
-Fam187b 0 0 0 0 1 2 2 0
-Fam19a2 0 1 0 1 1 0 0 1
-Fam19a5 0 0 0 0 0 0 0 0
-Fam214b 0 1 2 0 1 4 3 1
-Fance 0 2 0 0 0 4 0 0
-Fancl 2 0 0 0 0 0 0 0
-Fate1 0 0 0 0 0 0 0 0
-Fbxo34 4 1 1 1 3 4 0 1
-Fcho1 0 0 0 0 0 0 0 0
-Fcrla 0 0 0 0 0 0 1 0
-Fendrr 0 0 0 0 1 1 1 1
-Fgf18 0 0 0 0 0 0 0 0
-Flcn 7 0 1 3 2 8 0 1
-Flt3l 0 0 0 0 0 0 0 1
-Foxl2os 0 0 0 0 0 0 0 0
-Fth1 198 8 4 11 7 375 18 4
-Ftx 382 158 130 262 174 166 264 210
-Fuk 1 0 0 0 0 2 0 0
-Fut4-ps1 0 0 0 0 0 0 0 0
-Fut8 1 1 2 2 1 5 0 1
-Fxyd2 0 0 0 0 0 0 0 0
-G530011O06Rik 0 0 0 1 0 0 0 0
-G630025P09Rik 2 0 0 1 1 5 6 0
-G630055G22Rik 0 0 0 0 0 0 0 0
-G630071F17Rik 0 0 0 0 0 0 0 0
-G630093K05Rik 0 0 0 0 0 0 0 0
-G6b 0 0 1 0 0 0 0 0
-G730013B05Rik 6 2 2 2 0 2 0 0
-Gabpb1 1 0 0 0 0 3 2 1
-Gas5 5709 1275 1001 3375 3854 4602 3877 1194
-Gdap10 1 0 0 0 0 0 0 0
-Gm10007 0 0 0 0 0 0 0 0
-Gm10012 0 0 0 0 0 0 0 0
-Gm10033 5 0 0 4 0 1 0 0
-Gm10046 0 0 0 0 0 0 0 0
-Gm10052 0 1 0 0 0 0 1 1
-Gm10069 553 2 2 1 12 701 37 1
-Gm10125 0 2 2 1 0 1 0 0
-Gm10190 0 0 0 0 0 0 0 1
-Gm10248 0 0 0 0 0 1 0 0
-Gm10272 0 0 0 0 0 0 0 0
-Gm10280 0 1 0 0 0 0 0 0
-Gm10319 3 0 0 0 1 7 1 0
-Gm10336 0 0 0 1 0 0 1 2
-Gm10364 0 0 0 0 0 0 0 0
-Gm10373 0 0 0 0 0 0 0 0
-Gm10389 0 1 0 0 0 0 0 0
-Gm10390 0 0 0 0 2 0 1 0
-Gm10400 0 0 0 0 0 0 0 0
-Gm10409 0 0 0 0 0 0 0 0
-Gm10415 0 1 0 1 0 0 0 0
-Gm10416 0 0 0 0 0 0 0 0
-Gm10421 0 0 0 0 0 0 0 0
-Gm10432 0 1 0 1 0 0 0 1
-Gm10433 1 1 1 0 0 0 1 0
-Gm10440 0 0 0 0 0 0 0 0
-Gm10445 0 0 0 0 0 0 0 0
-Gm10451 0 0 0 0 0 0 0 0
-Gm10466 0 0 0 0 0 0 0 0
-Gm10474 0 0 0 0 0 0 0 0
-Gm10485 0 0 0 0 0 0 0 0
-Gm10494 0 0 0 0 0 0 0 0
-Gm10509 0 0 0 0 0 0 0 0
-Gm10510 0 0 0 0 0 0 0 0
-Gm10512 0 0 0 0 0 0 0 0
-Gm10516 1 0 0 0 1 0 2 0
-Gm10532 3 0 0 0 0 2 0 0
-Gm10536 0 0 0 0 0 0 0 0
-Gm10538 0 0 0 0 0 0 0 0
-Gm10548 1 0 1 2 1 1 1 1
-Gm10549 0 0 0 1 2 0 0 0
-Gm10556 0 0 0 0 0 0 0 0
-Gm10560 0 0 0 0 0 0 0 0
-Gm10578 0 0 0 0 0 0 0 0
-Gm10584 0 0 0 0 1 0 0 1
-Gm10619 0 1 0 0 0 0 0 0
-Gm10635 0 0 0 0 0 0 0 0
-Gm10636 0 0 0 0 0 0 0 1
-Gm10637 0 0 0 0 0 0 0 0
-Gm10638 0 0 0 0 1 0 0 0
-Gm10640 0 0 0 0 0 0 0 0
-Gm10649 0 2 1 0 0 1 1 1
-Gm10653 0 0 0 0 0 0 1 0
-Gm10658 2 0 0 0 1 2 0 0
-Gm10664 0 0 0 0 0 0 0 0
-Gm10677 2 0 0 0 0 1 0 0
-Gm10684 0 0 1 0 0 0 0 0
-Gm10714 0 0 0 0 0 0 0 0
-Gm10731 0 0 0 0 0 0 0 0
-Gm10745 0 0 0 0 0 0 0 0
-Gm10754 0 0 0 0 0 1 0 0
-Gm10768 26 0 0 0 0 29 4 0
-Gm10782 0 0 0 0 0 0 0 0
-Gm10785 4 0 0 3 0 0 0 0
-Gm10787 0 0 0 0 0 0 0 0
-Gm10789 0 0 0 0 0 0 1 0
-Gm10790 0 2 0 0 0 0 0 0
-Gm10791 4 0 0 0 0 6 0 0
-Gm10804 3 0 0 2 1 5 1 0
-Gm10814 0 0 0 0 0 0 0 1
-Gm10818 0 0 0 0 0 0 0 0
-Gm1082 0 0 0 0 0 0 0 0
-Gm10823 0 0 0 0 0 0 0 0
-Gm10825 0 0 0 0 0 0 0 0
-Gm10845 0 0 0 0 0 0 0 0
-Gm10857 0 0 0 0 0 0 0 0
-Gm10863 0 1 0 0 0 0 0 0
-Gm10865 0 0 0 1 2 2 2 1
-Gm10872 0 0 0 0 0 2 0 0
-Gm10941 0 0 0 0 0 0 0 0
-Gm11110 0 0 1 0 0 0 1 0
-Gm11149 0 0 1 0 0 0 0 0
-Gm11166 0 0 0 0 0 0 0 0
-Gm11186 0 0 0 0 0 0 0 0
-Gm11190 0 0 0 0 0 0 0 0
-Gm11194 0 0 1 0 0 0 0 0
-Gm11201 0 0 0 0 0 0 0 0
-Gm11202 0 0 0 0 0 0 0 0
-Gm11213 0 0 1 0 0 0 0 0
-Gm11240 0 0 0 0 0 0 0 0
-Gm11346 2 0 0 0 0 0 0 0
-Gm11351 0 0 0 0 0 0 0 0
-Gm1141 0 0 0 0 0 0 0 0
-Gm11413 0 0 0 0 0 0 0 0
-Gm11426 0 0 0 0 0 0 0 0
-Gm11468 0 0 0 0 0 0 0 0
-Gm11517 0 0 0 0 0 0 0 0
-Gm11529 0 0 0 0 0 0 0 0
-Gm11548 0 0 0 0 0 0 0 0
-Gm11549 0 0 0 0 0 0 0 0
-Gm11602 22 0 4 6 3 18 2 6
-Gm11627 0 0 0 0 0 0 0 0
-Gm11648 0 0 0 0 0 0 0 0
-Gm11696 0 0 1 0 1 0 3 0
-Gm11747 2 1 1 3 1 2 2 0
-Gm11762 0 0 0 0 0 0 1 1
-Gm11944 0 0 0 0 0 0 0 0
-Gm11961 0 0 0 0 0 0 0 0
-Gm11974 3 1 1 0 1 0 5 0
-Gm11978 0 2 0 0 0 0 0 0
-Gm11981 0 0 0 0 0 0 0 0
-Gm11985 0 0 0 0 0 0 0 0
-Gm12060 0 0 0 0 0 1 0 0
-Gm12070 0 0 0 0 0 0 0 0
-Gm12130 0 0 0 0 0 0 0 0
-Gm12159 0 0 1 0 0 0 0 0
-Gm12191 3 0 0 1 0 1 0 1
-Gm12216 5 2 2 0 1 0 4 0
-Gm12228 0 0 0 0 0 0 0 0
-Gm12238 9 2 2 2 4 11 0 2
-Gm12295 0 1 2 1 0 0 0 0
-Gm12298 0 0 0 0 0 0 0 0
-Gm12359 9 1 0 3 0 11 2 0
-Gm12360 0 0 0 0 0 0 0 0
-Gm12409 0 0 0 0 0 0 0 0
-Gm12504 0 0 0 0 0 0 0 0
-Gm12505 0 0 0 0 0 0 0 0
-Gm12522 0 0 0 0 0 0 0 0
-Gm12530 0 0 0 0 0 0 0 0
-Gm12603 0 0 0 0 0 0 0 0
-Gm12633 0 0 0 0 0 0 0 0
-Gm12669 0 1 0 1 0 1 0 0
-Gm12709 0 0 0 0 0 0 0 0
-Gm12718 2 0 0 0 1 3 0 0
-Gm12830 0 0 0 0 0 0 0 0
-Gm12839 0 0 0 0 0 0 0 0
-Gm12992 4 0 0 1 2 7 0 0
-Gm13003 0 0 0 0 0 0 0 0
-Gm13031 0 0 0 0 0 0 0 0
-Gm13032 0 1 2 0 0 0 0 0
-Gm13034 0 0 0 0 0 0 0 0
-Gm13037 0 0 0 0 0 0 0 0
-Gm13238 0 0 0 0 0 0 0 0
-Gm13293 0 0 0 0 0 0 0 0
-Gm13315 0 0 1 0 0 0 0 0
-Gm13363 0 0 0 1 1 0 0 0
-Gm13375 0 0 0 0 1 2 1 1
-Gm13399 0 0 0 0 0 0 0 0
-Gm13446 0 0 0 0 0 0 0 0
-Gm13483 2 1 1 0 0 0 0 0
-Gm13490 0 0 0 0 0 1 0 0
-Gm13497 0 0 0 0 0 1 0 0
-Gm13498 0 0 0 0 0 0 0 0
-Gm13539 0 0 0 0 0 0 0 0
-Gm13544 0 0 0 0 0 0 0 0
-Gm13546 0 0 0 0 0 0 0 0
-Gm13580 0 0 0 0 0 0 0 0
-Gm13582 0 0 0 0 0 0 0 0
-Gm13629 0 0 1 0 0 0 0 2
-Gm13704 0 0 0 0 0 0 0 0
-Gm13710 0 0 0 0 0 0 0 0
-Gm13749 0 0 0 0 0 0 0 0
-Gm13752 0 0 0 0 0 0 0 0
-Gm13807 2 0 0 0 0 0 0 0
-Gm13845 0 0 0 0 0 1 0 0
-Gm13939 0 1 0 0 0 2 0 0
-Gm13944 2 0 0 0 0 2 1 0
-Gm14005 3 6 3 5 0 8 0 1
-Gm14015 0 0 0 0 0 0 0 0
-Gm14023 0 2 0 1 0 0 0 0
-Gm14047 0 0 0 0 0 0 0 0
-Gm14057 0 0 0 0 0 0 0 0
-Gm14164 0 0 1 0 1 0 0 0
-Gm14169 0 0 0 0 0 0 0 0
-Gm14204 0 0 0 0 0 0 0 0
-Gm14207 1 2 2 5 0 0 0 1
-Gm14318 0 1 0 0 0 1 0 0
-Gm14327 0 0 0 0 0 0 0 0
-Gm14379 0 0 0 0 0 0 0 0
-Gm14403 1 0 0 0 0 5 0 0
-Gm14405 0 0 0 0 0 0 0 0
-Gm14492 0 0 0 0 0 0 3 0
-Gm14634 0 0 1 0 0 0 1 1
-Gm14635 0 0 0 0 0 0 0 0
-Gm14718 0 0 0 0 0 0 0 0
-Gm14812 0 0 0 0 0 0 0 0
-Gm14827 0 0 0 0 0 0 0 0
-Gm14858 0 0 0 0 0 0 0 0
-Gm14872 1 1 0 0 4 1 0 0
-Gm14873 0 0 0 0 0 0 0 0
-Gm15008 0 0 0 0 0 0 0 0
-Gm15133 0 0 0 0 0 0 0 0
-Gm15179 0 0 0 0 0 0 0 0
-Gm15217 1 0 0 1 0 0 0 0
-Gm15328 0 0 0 0 0 0 0 0
-Gm15348 0 0 0 0 1 2 0 0
-Gm15350 0 0 0 0 0 0 0 0
-Gm15401 0 0 0 2 0 0 0 0
-Gm15408 0 0 0 0 0 2 0 0
-Gm15412 0 0 0 0 0 0 0 0
-Gm15413 0 0 0 0 0 0 0 0
-Gm15417 4 2 3 2 4 7 13 0
-Gm15421 0 0 0 0 0 1 0 0
-Gm15441 6 6 3 3 1 11 7 6
-Gm15446 0 0 0 0 0 0 0 0
-Gm15471 0 0 0 0 0 1 0 0
-Gm15545 1 0 1 1 0 1 0 0
-Gm15612 0 0 0 0 0 1 0 0
-Gm15645 0 0 0 0 0 0 0 0
-Gm15663 0 1 0 0 0 0 0 0
-Gm15698 0 0 0 0 0 0 0 0
-Gm15706 0 0 0 0 0 1 0 0
-Gm15708 0 0 0 0 0 0 0 0
-Gm15713 1 0 2 1 0 3 0 0
-Gm15760 1 0 0 2 0 0 0 0
-Gm15772 0 0 0 0 0 2 0 0
-Gm15787 2 0 0 0 6 2 4 0
-Gm15850 0 0 4 0 0 0 0 0
-Gm15880 1 0 0 0 0 0 0 0
-Gm15910 0 0 0 0 0 0 0 2
-Gm15915 0 0 0 0 0 0 0 0
-Gm15941 0 0 0 0 0 0 0 1
-Gm15987 0 0 0 0 0 0 0 0
-Gm15997 0 1 0 0 0 0 0 0
-Gm16023 15 0 0 2 0 41 3 0
-Gm16039 8 2 3 4 2 2 4 2
-Gm16062 0 0 0 0 0 3 0 0
-Gm16063 0 0 0 0 0 0 0 0
-Gm16065 0 0 0 0 0 0 0 0
-Gm16119 1 0 0 3 4 8 8 0
-Gm16157 11 0 0 0 5 6 0 0
-Gm16197 0 0 0 0 0 1 0 0
-Gm16287 0 0 0 0 0 0 0 0
-Gm16291 2 3 2 0 1 5 0 1
-Gm16294 0 0 0 0 0 0 0 0
-Gm1631 0 0 0 0 0 0 0 0
-Gm16325 0 0 0 0 0 0 0 0
-Gm16336 0 0 0 0 0 0 0 0
-Gm16386 0 1 0 0 0 0 0 0
-Gm16497 0 0 0 0 0 0 0 0
-Gm16516 1 0 1 0 0 0 0 0
-Gm16523 0 0 0 0 0 0 0 0
-Gm1653 0 0 0 0 0 0 0 0
-Gm16548 1 0 0 0 1 3 1 0
-Gm16551 5 0 0 0 0 3 3 0
-Gm16576 0 0 0 0 0 0 0 0
-Gm16596 0 3 3 3 0 0 0 3
-Gm16617 0 0 0 0 0 0 0 0
-Gm16675 3 0 0 0 0 4 0 0
-Gm16677 0 0 0 0 0 0 0 0
-Gm16701 0 1 0 0 0 0 0 0
-Gm16702 0 0 0 0 0 0 0 0
-Gm16793 6 0 0 0 0 2 0 0
-Gm16796 0 0 0 0 0 0 0 0
-Gm16833 4 0 0 2 1 4 3 1
-Gm16845 8 0 4 4 2 6 6 0
-Gm16853 0 0 0 0 0 0 0 0
-Gm16861 4 1 0 1 1 6 1 1
-Gm16863 0 1 1 0 0 0 0 0
-Gm16880 4 0 0 0 1 2 0 0
-Gm16894 0 0 0 1 0 0 0 0
-Gm16897 0 0 0 1 0 0 1 2
-Gm16907 3 0 0 0 0 2 0 0
-Gm16938 0 0 0 0 0 0 0 0
-Gm16973 4 0 0 2 0 2 0 0
-Gm16982 0 0 0 0 0 1 0 0
-Gm16998 2 1 2 0 8 5 9 1
-Gm17066 0 0 1 0 0 2 0 0
-Gm1715 0 0 0 0 0 0 0 0
-Gm1720 0 0 0 0 0 0 0 0
-Gm17644 0 0 0 0 0 0 0 0
-Gm17745 0 0 0 1 0 0 0 1
-Gm17746 0 0 0 0 0 0 0 0
-Gm17751 0 0 0 0 0 0 0 0
-Gm17757 0 0 0 0 0 0 0 0
-Gm17762 0 1 0 0 1 0 0 0
-Gm17769 0 1 1 0 0 0 0 2
-Gm17801 0 0 0 0 0 0 0 0
-Gm17821 0 0 0 0 0 0 0 0
-Gm17830 0 0 0 0 0 0 0 0
-Gm1821 1 0 0 0 0 0 1 0
-Gm18409 0 0 0 0 0 0 0 0
-Gm18853 0 0 0 0 0 0 0 0
-Gm19276 0 0 1 0 0 0 0 0
-Gm19277 0 0 0 0 0 0 0 0
-Gm19299 0 0 0 0 0 0 0 0
-Gm19303 0 1 0 0 0 0 0 0
-Gm19395 0 0 0 0 0 0 0 0
-Gm19424 0 0 0 0 0 0 0 0
-Gm1943 0 0 0 0 0 0 0 0
-Gm19434 0 0 0 0 0 0 0 0
-Gm19461 3 0 1 0 0 7 0 0
-Gm19466 0 2 1 0 0 2 0 0
-Gm19510 0 0 0 0 0 0 0 0
-Gm19522 1 0 1 1 0 3 0 2
-Gm19557 0 0 0 1 0 0 0 0
-Gm19583 0 0 0 0 0 0 0 0
-Gm19589 0 0 0 0 0 0 0 0
-Gm19619 0 0 0 0 0 0 0 0
-Gm1968 0 0 0 0 0 0 0 0
-Gm19689 0 0 0 0 0 0 0 0
-Gm19705 0 2 2 0 0 0 0 0
-Gm19710 2 0 0 0 0 3 0 0
-Gm19757 0 0 0 0 0 0 0 0
-Gm1976 2 0 0 0 0 6 0 0
-Gm19782 2 2 1 0 0 0 0 0
-Gm19784 0 0 0 0 0 0 0 0
-Gm19897 0 0 0 0 0 0 0 0
-Gm1995 0 0 0 0 0 0 0 0
-Gm19990 0 0 0 0 0 0 0 0
-Gm20063 0 0 0 0 0 0 0 0
-Gm20098 0 0 0 0 0 0 0 0
-Gm2011 0 0 0 0 0 0 0 0
-Gm20110 0 0 0 0 0 0 0 2
-Gm20125 0 1 0 0 0 0 0 0
-Gm20139 0 0 0 2 0 0 0 0
-Gm20187 0 0 0 0 0 0 0 0
-Gm20199 0 0 0 1 0 0 0 0
-Gm20257 0 0 0 0 0 0 0 0
-Gm20268 0 0 0 0 0 0 0 0
-Gm2027 0 0 0 0 0 0 0 0
-Gm20300 2 0 0 0 0 4 0 0
-Gm20324 0 0 0 0 0 0 0 0
-Gm20337 0 0 0 0 0 0 1 0
-Gm20356 0 0 0 0 0 0 0 0
-Gm20362 0 0 0 0 0 0 0 0
-Gm20554 0 0 0 0 0 0 0 0
-Gm20556 0 0 0 0 0 0 0 0
-Gm20597 0 0 0 0 0 0 0 0
-Gm20605 4 0 0 0 1 2 0 0
-Gm2061 5 0 0 0 0 0 0 0
-Gm20611 0 0 0 0 0 0 0 0
-Gm20735 0 0 0 0 0 0 0 0
-Gm20740 0 0 0 0 0 0 0 0
-Gm20741 0 0 0 0 0 0 0 0
-Gm20743 0 0 0 0 0 0 0 0
-Gm20744 0 0 0 0 0 0 0 0
-Gm20745 0 0 1 0 0 0 0 0
-Gm20748 0 0 0 0 0 0 0 0
-Gm20750 0 0 0 0 0 0 0 0
-Gm20751 0 0 0 0 0 0 0 0
-Gm20752 0 0 0 0 0 0 0 0
-Gm20753 0 0 0 0 0 0 0 0
-Gm20754 1 0 0 1 0 0 0 0
-Gm20755 0 0 0 0 0 0 0 0
-Gm20756 0 0 0 0 0 1 0 0
-Gm20757 0 2 1 0 2 0 0 0
-Gm20758 0 0 0 0 0 0 0 0
-Gm20759 0 0 0 0 0 0 0 0
-Gm20857 0 0 0 0 0 0 0 0
-Gm20858 0 0 0 0 0 0 0 0
-Gm20871 0 0 0 0 0 0 0 0
-Gm21057 0 0 1 0 0 0 0 0
-Gm2109 0 0 0 0 0 0 0 0
-Gm2115 0 0 0 0 0 0 0 0
-Gm21221 0 0 0 0 0 0 0 0
-Gm21269 0 0 0 0 0 0 0 0
-Gm21276 0 0 0 0 0 0 0 0
-Gm21284 0 0 0 2 0 0 0 1
-Gm2176 0 0 0 0 0 0 0 0
-Gm21944 1 0 0 0 0 3 0 0
-Gm2381 0 0 0 0 0 0 0 0
-Gm2447 0 0 0 0 0 0 0 1
-Gm2516 0 0 0 0 0 0 0 0
-Gm2518 2 0 1 1 0 2 2 0
-Gm2694 0 1 0 0 0 0 0 0
-Gm2721 0 0 0 0 0 0 0 0
-Gm2762 0 1 0 0 0 0 0 0
-Gm2837 0 0 0 0 0 0 0 0
-Gm2848 0 0 0 0 0 0 0 0
-Gm3002 0 0 0 0 0 0 0 0
-Gm3020 0 0 0 0 0 0 0 0
-Gm3086 2 0 0 0 0 1 0 1
-Gm3143 0 0 0 0 0 0 0 0
-Gm3219 1 0 0 0 0 5 0 0
-Gm3230 1 0 0 0 0 5 1 0
-Gm3279 0 0 0 0 0 0 0 0
-Gm3414 1 0 0 0 0 0 0 1
-Gm3428 0 0 0 0 0 0 0 0
-Gm3434 0 0 0 0 0 0 0 0
-Gm3716 0 0 0 0 0 0 0 0
-Gm3833 0 0 0 0 0 0 0 0
-Gm3893 0 0 0 0 0 0 0 0
-Gm3925 0 0 0 0 0 0 0 0
-Gm4013 0 0 0 0 0 0 0 0
-Gm41 0 0 0 0 0 0 0 0
-Gm4224 0 0 0 0 0 0 0 0
-Gm4251 0 0 0 0 0 0 0 0
-Gm4262 0 0 0 0 0 0 0 0
-Gm4265 4 0 0 0 0 0 0 0
-Gm4278 0 0 0 0 0 0 0 0
-Gm4285 0 0 0 1 0 1 1 0
-Gm4349 0 0 0 0 0 0 0 0
-Gm4371 0 1 0 0 0 0 0 2
-Gm4432 0 0 0 0 0 0 0 0
-Gm4489 0 0 0 0 0 0 0 0
-Gm4532 1 0 1 0 0 0 0 1
-Gm4541 0 0 0 0 0 0 0 0
-Gm4566 0 0 0 0 0 0 0 0
-Gm4598 0 0 0 0 0 0 0 0
-Gm4710 0 0 0 0 0 0 0 0
-Gm4719 0 0 0 0 0 0 0 0
-Gm4759 0 0 0 0 0 0 0 0
-Gm4776 0 0 0 0 0 0 0 0
-Gm4792 0 0 0 0 0 0 0 0
-Gm4814 0 0 0 0 0 0 0 0
-Gm4827 0 0 0 0 0 0 0 0
-Gm4850 0 0 0 0 0 0 0 0
-Gm4872 0 0 0 0 0 0 0 0
-Gm4890 0 0 0 2 0 2 0 0
-Gm4926 0 0 0 0 0 0 0 0
-Gm4956 1 0 0 0 0 1 0 0
-Gm4961 0 0 0 0 0 0 0 0
-Gm4971 0 0 0 0 0 0 0 0
-Gm5 0 0 0 0 0 0 0 0
-Gm5039 0 0 0 0 0 0 0 0
-Gm5065 0 0 0 0 0 0 0 0
-Gm5069 0 0 0 0 0 0 0 0
-Gm5083 0 0 0 0 0 0 0 0
-Gm5084 0 0 0 0 0 0 0 0
-Gm5086 0 0 0 0 0 0 0 0
-Gm5088 0 0 1 1 0 0 0 2
-Gm5089 10 1 1 0 0 19 1 2
-Gm5091 0 0 0 0 0 0 0 0
-Gm5095 1 1 0 1 0 1 0 0
-Gm5105 0 3 2 2 0 0 0 0
-Gm5122 0 0 0 0 0 0 0 0
-Gm5124 0 0 0 0 0 0 0 0
-Gm5126 0 0 0 0 0 0 0 0
-Gm5129 1 0 0 1 1 0 0 0
-Gm5166 0 0 0 0 0 0 0 0
-Gm5176 0 0 0 0 0 0 2 0
-Gm5177 0 0 0 0 0 0 0 0
-Gm53 0 0 0 0 0 0 0 0
-Gm5334 0 0 0 0 0 0 0 0
-Gm5420 0 0 0 0 0 0 0 0
-Gm5424 93 1 0 0 5 77 5 0
-Gm5434 0 0 0 0 0 0 0 0
-Gm5441 0 31 33 36 0 0 1 41
-Gm5468 0 0 0 0 0 0 0 0
-Gm5475 0 0 0 0 0 0 0 0
-Gm5476 0 0 0 0 0 0 0 0
-Gm5477 0 0 0 0 0 0 0 0
-Gm5478 0 0 0 0 0 0 0 0
-Gm5480 0 0 0 0 0 0 0 0
-Gm5485 0 0 0 0 0 0 0 0
-Gm5512 7 1 1 0 0 2 1 0
-Gm5523 0 0 0 0 0 0 0 0
-Gm5547 0 0 0 0 0 0 0 0
-Gm5577 0 0 0 0 0 0 0 0
-Gm5607 0 0 0 0 0 2 0 0
-Gm5627 2 0 0 0 0 0 0 0
-Gm5643 0 0 0 0 0 0 1 1
-Gm5712 0 0 0 0 0 0 0 0
-Gm5766 0 0 0 0 0 0 0 0
-Gm5779 0 0 0 0 0 0 0 0
-Gm5801 3 0 0 0 0 0 0 0
-Gm5833 0 0 0 0 0 0 0 0
-Gm5860 0 0 1 0 0 0 0 0
-Gm5925 0 0 0 0 0 0 0 0
-Gm6042 0 0 0 0 0 0 0 0
-Gm6083 0 0 0 0 0 0 0 0
-Gm6116 0 0 1 0 0 0 0 0
-Gm6150 0 0 0 0 0 0 0 0
-Gm6194 0 0 0 0 0 0 0 0
-Gm6213 0 0 0 0 0 0 0 1
-Gm6225 0 0 0 0 3 0 3 2
-Gm6249 0 0 0 0 0 0 0 0
-Gm6260 0 0 0 0 0 0 0 0
-Gm6268 0 0 0 0 0 0 0 0
-Gm6277 1 0 0 1 1 0 0 0
-Gm6297 0 0 0 2 0 0 2 0
-Gm6300 0 0 0 0 0 0 0 0
-Gm6307 0 6 6 29 0 0 2 9
-Gm6313 0 2 1 8 0 0 0 4
-Gm6329 0 0 0 0 0 0 0 0
-Gm6367 0 0 0 0 0 0 0 0
-Gm6402 0 0 0 0 0 0 0 0
-Gm6416 0 0 0 0 0 0 0 0
-Gm6455 0 0 0 0 0 0 0 0
-Gm6498 1 0 0 0 0 1 0 0
-Gm6524 0 0 0 0 0 0 0 0
-Gm6525 0 0 0 0 0 0 0 0
-Gm6548 0 1 0 0 0 2 0 0
-Gm6567 0 0 0 0 0 0 0 0
-Gm6568 0 0 0 0 0 2 0 0
-Gm6578 0 0 0 0 0 0 0 0
-Gm6602 0 0 0 0 0 0 0 0
-Gm6607 0 0 0 0 0 0 0 0
-Gm6623 0 0 0 0 0 0 0 0
-Gm6634 0 0 0 0 0 0 0 0
-Gm6639 0 0 0 0 0 0 0 0
-Gm6642 0 0 0 0 0 0 0 0
-Gm6644 0 1 0 0 1 0 0 0
-Gm6654 0 0 0 0 0 0 0 0
-Gm6682 0 0 0 0 0 0 0 0
-Gm6756 0 0 0 0 0 0 0 0
-Gm6787 0 0 0 0 0 0 0 0
-Gm6793 4 0 1 0 0 1 0 0
-Gm6815 0 0 0 0 0 0 0 0
-Gm6936 0 0 0 0 0 0 0 0
-Gm6938 0 0 0 0 0 0 0 0
-Gm6981 3 1 0 0 0 1 3 0
-Gm6994 0 0 0 0 0 0 0 0
-Gm7008 1 0 0 0 0 1 0 0
-Gm7056 0 0 0 0 0 0 0 0
-Gm7104 0 0 0 0 0 0 0 0
-Gm7134 0 0 0 0 0 0 0 0
-Gm7271 0 0 0 0 0 0 0 0
-Gm7334 0 0 0 0 0 0 0 0
-Gm7337 0 0 0 0 0 0 0 0
-Gm7367 2 1 0 1 0 1 0 0
-Gm7444 0 0 0 0 0 0 0 0
-Gm7457 0 0 0 0 0 0 0 0
-Gm7538 0 0 0 0 0 0 0 0
-Gm7550 0 0 0 0 0 0 0 0
-Gm7854 8 1 2 1 7 1 3 0
-Gm7904 0 0 0 0 0 0 0 0
-Gm7977 0 0 0 0 0 0 0 0
-Gm805 0 0 0 1 0 0 0 0
-Gm8096 0 0 0 0 0 0 0 0
-Gm8179 0 0 0 0 0 0 0 0
-Gm8221 0 0 0 0 0 0 0 0
-Gm8234 0 0 0 0 0 0 0 0
-Gm833 0 0 0 0 0 0 0 0
-Gm8363 0 0 0 0 0 0 0 0
-Gm839 0 0 0 0 0 0 0 0
-Gm8579 0 0 0 0 0 0 0 0
-Gm8580 0 0 0 0 0 0 0 0
-Gm8615 1 0 0 0 1 3 0 0
-Gm8633 0 0 0 0 0 0 0 0
-Gm8709 0 0 0 0 0 0 0 0
-Gm872 0 0 0 0 0 0 0 0
-Gm8773 0 0 0 0 0 0 0 0
-Gm8801 0 0 0 0 0 0 0 0
-Gm8883 4 0 0 0 0 10 2 0
-Gm8884 0 0 0 0 0 0 0 0
-Gm8979 0 0 0 0 0 0 0 0
-Gm8989 0 0 0 0 0 0 0 0
-Gm9054 1 0 0 1 0 0 0 0
-Gm9079 0 0 0 0 0 0 0 0
-Gm9159 0 0 0 0 0 0 0 0
-Gm9199 0 0 0 0 0 0 0 0
-Gm9696 0 0 0 0 0 0 0 0
-Gm9731 0 0 0 0 0 0 0 0
-Gm9767 0 0 0 0 0 0 0 0
-Gm9776 1 0 0 2 4 0 0 0
-Gm9833 0 0 0 0 0 0 0 0
-Gm9855 0 0 0 0 0 0 0 0
-Gm9866 0 0 0 0 0 0 0 0
-Gm9871 0 0 0 0 0 0 0 0
-Gm9895 1 1 0 0 1 4 1 0
-Gm9899 0 1 1 2 0 0 0 1
-Gm9920 2 0 0 0 1 2 1 0
-Gm9926 0 0 0 0 0 0 0 0
-Gm9958 0 0 0 0 0 0 0 0
-Gm9961 4 0 0 1 3 1 1 0
-Gm9962 0 0 0 0 0 0 0 0
-Gm9999 0 0 0 0 0 1 4 0
-Gnas 81 7 13 7 3 65 13 9
-Gnb5 2 1 0 0 0 0 0 0
-Gorasp2 4 0 0 2 1 14 2 1
-Gpr137b-ps 1 1 1 0 0 0 0 2
-Gpr19 0 0 0 0 1 0 0 0
-Gpx2-ps1 0 0 0 0 0 0 0 0
-Grip1 0 1 0 0 0 1 0 0
-Gsdmcl-ps 1 0 0 0 0 0 0 0
-Gt(ROSA)26Sor 3 3 9 1 0 4 3 3
-H19 0 1 1 0 1 0 3 0
-H2-K2 1 0 0 0 0 3 1 0
-H2-Q5 0 0 0 0 0 0 0 0
-H2-T10 1 0 0 1 0 3 0 0
-H2afy3 0 0 0 0 0 0 0 0
-Has2as 0 0 0 0 0 0 0 0
-Hdac10 0 0 0 0 0 18 0 0
-Hgd 55 0 1 0 4 71 6 0
-Hhatl 0 0 0 1 0 0 0 0
-Hmga2-ps1 0 0 0 0 0 0 0 0
-Hmgb1-rs17 0 0 0 0 0 0 0 0
-Hotair 0 0 0 0 0 0 0 0
-Hoxa11as 0 0 0 0 0 0 0 0
-Hoxd11 0 0 0 0 0 0 0 0
-Hrh3 0 0 0 0 0 0 0 0
-Hsf4 9 0 1 1 2 2 2 0
-Hspa13 3 0 0 0 1 6 2 0
-Hyi 1 0 0 0 0 5 4 0
-I730028E13Rik 0 0 0 0 0 0 0 0
-I730030J21Rik 0 0 0 0 0 0 0 0
-Icmt 5 0 0 1 0 8 0 0
-Igf2as 0 0 0 0 0 0 0 0
-Il15ra 18 2 0 6 14 34 4 0
-Il4 0 0 0 0 0 0 0 0
-Ippk 5 1 2 1 0 4 1 1
-Ipw 0 0 1 1 0 0 0 0
-Irf3 3 1 0 0 0 1 0 0
-Jmjd4 2 1 1 0 1 7 3 0
-Jpx 1 0 0 2 2 6 1 0
-Kat5 1 0 1 0 4 5 0 1
-Kcnj15 0 0 0 0 0 0 0 0
-Kcnk2 4 1 0 0 0 0 1 1
-Kcnq1ot1 7 1 0 0 0 5 1 2
-Kctd18 0 0 0 0 0 0 0 0
-Khdrbs1 1 0 0 1 0 2 1 1
-Kif4-ps 0 0 0 0 0 0 0 0
-Kis2 0 0 0 0 2 0 0 0
-Klc2 1 0 0 0 2 1 0 1
-Klk1b7-ps 0 0 0 0 0 0 0 0
-Klra13-ps 0 0 0 0 0 0 0 0
-Klrb1-ps1 0 0 0 0 0 0 0 0
-Klrb1f 0 0 0 0 0 0 0 0
-Krit1 1 1 1 1 0 1 0 0
-Krt74 0 0 0 0 0 0 0 0
-LOC100043315 0 0 0 0 0 0 0 1
-LOC100503496 0 0 0 0 0 2 1 0
-LOC100504039 0 0 0 0 0 0 0 0
-LOC100504703 0 0 0 0 0 0 0 0
-LOC101243624 0 0 0 0 0 0 0 0
-LOC101410165 0 1 0 0 0 1 0 0
-LOC106740 0 0 0 0 0 0 0 0
-LOC171588 0 0 0 0 0 0 0 0
-Ldha 9 1 4 4 2 12 10 1
-Lilra6 0 0 0 0 0 0 0 0
-Lins 0 0 0 0 0 3 1 0
-Lmf1 4 1 3 1 0 3 0 1
-Lrp8 0 2 0 0 0 0 0 0
-Lrrc28 12 0 2 0 2 40 2 2
-Lrrc57 0 0 0 1 0 1 4 0
-Lrrtm4 0 0 0 0 0 0 0 0
-Luc7l 12 0 4 2 0 16 2 0
-Ly9 0 0 0 0 0 0 0 0
-Lypd6 0 2 1 0 0 0 0 0
-Mageb16-ps1 0 0 0 0 0 0 0 0
-Magix 0 0 0 1 1 3 0 0
-Malat1 167 36 41 25 9 201 31 50
-Map1lc3a 6 1 0 2 0 9 0 3
-March2 14 4 2 0 0 12 2 2
-Marcksl1-ps4 0 0 0 0 0 1 0 0
-Mcpt-ps1 0 0 0 0 0 0 0 0
-Mdp1 1 0 0 1 0 2 0 2
-Mea1 3 1 0 1 2 4 2 0
-Meg3 0 4 4 4 0 0 0 0
-Mgarp 0 0 0 0 0 0 0 0
-Miat 0 0 0 0 0 0 0 0
-Milr1 0 0 0 0 0 2 0 0
-Minos1 11 1 2 3 1 1 3 0
-Mipep 4 1 2 1 0 6 0 0
-Mir100 693 2238 1520 1200 566 268 603 1749
-Mir101a 3053 1460 1381 4974 2064 3015 2188 1557
-Mir101b 17063 635 544 1984 11066 16253 10901 573
-Mir101c 1 0 0 1 0 2 1 0
-Mir103-1 4 0 0 3 3 3 1 0
-Mir103-2 17 7 6 9 10 13 15 4
-Mir105 0 0 0 0 0 0 0 0
-Mir106a 0 0 0 0 2 0 0 0
-Mir106b 181 101 84 348 113 148 137 118
-Mir107 1034 175 112 413 641 704 622 142
-Mir10a 70833 35173 68923 40444 59554 43045 70877 46830
-Mir10b 3002 34668 54096 51870 1080 1189 1777 49658
-Mir1186 0 0 0 0 0 0 0 0
-Mir1186b 0 0 0 0 0 0 0 0
-Mir1187 0 0 0 0 0 0 0 0
-Mir1188 0 0 0 0 0 0 0 0
-Mir1190 0 0 0 0 0 0 0 0
-Mir1191 17 0 1 1 0 10 4 1
-Mir1192 0 0 0 0 0 0 0 0
-Mir1193 1 1 0 0 0 0 0 1
-Mir1195 37 9 6 11 17 41 12 11
-Mir1196 0 0 0 0 0 3 0 1
-Mir1197 0 0 0 0 0 0 0 0
-Mir1198 12 1 1 3 2 16 6 2
-Mir1199 1 3 1 4 1 0 0 1
-Mir1224 0 0 0 0 0 0 0 0
-Mir122a 29767 12 7 27 24233 11911 24463 8
-Mir1247 38 27 15 29 54 42 67 28
-Mir1249 19 39 39 52 29 9 16 37
-Mir124a-1 0 0 0 0 0 0 0 0
-Mir124a-2 0 0 0 0 0 0 0 0
-Mir124a-3 0 0 0 0 0 0 0 0
-Mir1251 0 0 0 0 0 0 0 0
-Mir125a 2326 7567 7389 7258 1696 731 1947 8953
-Mir125b-1 30 131 92 190 18 6 23 119
-Mir125b-2 156 771 591 1284 149 60 133 693
-Mir126 47368 70166 59307 88603 32811 17742 39170 65553
-Mir1264 0 0 0 0 0 0 0 0
-Mir127 2961 2178 2096 2262 1398 474 776 2284
-Mir128-1 19 116 82 175 20 14 24 77
-Mir128-2 0 5 0 18 1 0 1 10
-Mir129-1 1 0 0 0 1 2 0 0
-Mir129-2 0 0 0 1 0 0 0 0
-Mir1298 0 0 0 0 0 0 0 0
-Mir1306 4 1 1 6 2 2 2 2
-Mir130a 1969 1056 835 1976 1464 1104 1659 985
-Mir130b 18 18 13 27 14 8 23 14
-Mir132 38 136 125 329 22 30 28 149
-Mir133a-1 0 16 11 25 0 0 0 8
-Mir133a-2 0 1 0 1 0 0 0 0
-Mir133b 0 32 26 77 0 0 0 24
-Mir134 7 2 6 10 7 0 0 8
-Mir135a-1 1 0 0 0 0 0 0 0
-Mir135a-2 0 0 0 0 0 0 0 0
-Mir135b 0 1 0 0 0 0 0 1
-Mir136 132 80 76 300 36 13 27 89
-Mir137 13 0 0 0 8 2 6 0
-Mir138-1 0 1 0 2 0 0 0 0
-Mir138-2 0 1 0 1 0 0 0 0
-Mir139 103 79 69 217 66 74 63 80
-Mir140 1287 1205 988 3410 801 1109 831 1164
-Mir141 483 22 17 15 120 43 119 16
-Mir142 4349 1888 1187 2574 2290 1519 4278 1577
-Mir143 89792 228272 227298 428463 57040 70208 65791 232955
-Mir143hg 90501 229566 228498 430054 57480 70435 66297 234533
-Mir144 723 3833 2417 1050 468 333 1107 3778
-Mir145 705 1294 1200 1591 440 227 505 1577
-Mir146 2127 1901 1694 2555 1377 781 1758 1724
-Mir146b 0 1 1 0 0 0 0 0
-Mir147 1 0 1 1 0 0 1 0
-Mir148a 258578 26191 24636 39859 177349 256441 193465 25878
-Mir148b 1805 1070 970 1998 1321 1056 1482 1001
-Mir149 25 1399 1123 2295 9 8 16 1289
-Mir150 286 844 685 1193 99 78 170 874
-Mir152 340 255 216 670 226 206 211 274
-Mir153 0 31 32 36 0 0 1 40
-Mir154 2 2 0 6 3 0 0 5
-Mir155 14 83 79 192 3 8 9 75
-Mir15a 770 294 256 774 568 233 703 285
-Mir15b 163 121 97 231 101 87 153 111
-Mir16-1 95 39 34 87 71 50 76 47
-Mir16-2 17 18 11 26 18 9 23 11
-Mir17 96 55 36 122 63 51 76 35
-Mir17hg 32320 7428 6690 16161 24182 24856 25904 7910
-Mir18 7 7 7 8 9 4 13 7
-Mir181a-1 17 76 61 241 14 10 11 76
-Mir181a-2 78 475 398 1155 69 115 82 445
-Mir181b-1 0 5 4 5 0 0 0 5
-Mir181b-2 2 18 17 88 1 5 4 19
-Mir181c 567 3488 3113 11824 366 384 427 3436
-Mir181d 60 416 340 771 42 46 38 426
-Mir182 1655 49 26 54 879 3409 1075 42
-Mir183 156 12 2 4 71 181 130 7
-Mir1839 301 114 75 416 183 244 226 96
-Mir184 4 55 41 90 0 2 2 53
-Mir1843 524 146 133 452 386 589 431 121
-Mir1843b 272 148 109 300 196 335 243 137
-Mir185 31 39 24 161 23 16 16 21
-Mir186 2037 2945 2416 4145 1434 738 1809 2711
-Mir187 10 8 6 14 19 5 7 13
-Mir188 5 6 8 7 5 0 2 8
-Mir1892 0 0 0 1 0 1 0 0
-Mir1893 0 0 0 0 0 0 0 0
-Mir1894 0 0 0 0 0 0 0 0
-Mir1895 0 0 0 0 0 0 0 0
-Mir1896 0 0 0 0 0 0 0 0
-Mir1897 0 0 0 0 0 0 0 0
-Mir1898 0 0 0 0 0 0 0 0
-Mir1899 0 0 0 0 0 0 0 0
-Mir18b 0 0 0 0 0 0 0 0
-Mir190 10 20 19 65 9 5 10 25
-Mir1900 0 0 0 0 0 0 0 0
-Mir1901 0 0 0 0 0 0 0 0
-Mir1902 0 0 0 0 0 0 0 0
-Mir1903 0 0 0 0 0 0 0 0
-Mir1904 0 0 0 0 0 0 0 0
-Mir1905 0 0 0 0 0 0 0 0
-Mir1906-1 0 0 0 0 0 0 0 0
-Mir1906-2 0 0 0 0 0 0 0 0
-Mir1907 0 1 0 0 0 0 0 0
-Mir190b 0 2 3 8 1 0 1 4
-Mir191 22730 26548 23372 22481 18726 13095 22490 25448
-Mir1912 0 0 0 0 0 0 0 0
-Mir192 662133 3214 3163 6029 490327 630849 526600 3252
-Mir1928 0 0 0 0 0 0 0 0
-Mir1929 0 0 2 1 0 0 0 1
-Mir193 167 2 2 4 101 61 83 1
-Mir1930 0 0 0 0 0 0 0 0
-Mir1931 0 0 0 0 0 0 0 0
-Mir1932 0 0 0 0 0 0 0 0
-Mir1933 2 6 2 14 0 0 1 1
-Mir1934 2 3 1 3 0 0 0 0
-Mir1935 0 0 0 0 0 1 1 0
-Mir1936 0 0 0 0 0 0 0 0
-Mir1938 0 1 0 2 0 0 0 1
-Mir193b 8 55 45 93 4 9 8 38
-Mir194-1 220 6 13 8 160 81 141 6
-Mir194-2 1316 19 15 20 865 439 880 16
-Mir1940 2 1 1 1 1 1 1 1
-Mir1941 0 0 0 0 0 0 0 1
-Mir1942 0 0 0 0 0 0 0 0
-Mir1943 8 41 39 63 8 4 15 37
-Mir1945 2 0 1 0 0 1 1 0
-Mir1946a 0 0 0 0 0 0 0 0
-Mir1946b 2 1 1 1 0 4 3 3
-Mir1947 15 22 28 29 15 6 13 18
-Mir1948 869 2 2 3 648 259 617 4
-Mir1949 0 1 1 0 0 0 0 3
-Mir195 158 775 692 1238 112 75 120 792
-Mir1950 28 0 2 1 4 39 3 1
-Mir1951 0 0 0 0 0 0 0 0
-Mir1952 0 0 0 0 0 0 0 0
-Mir1953 0 0 0 0 0 0 0 0
-Mir1954 0 0 0 0 0 0 1 0
-Mir1955 3 1 0 0 1 1 1 0
-Mir1956 0 0 0 0 0 0 0 0
-Mir1957 0 0 0 0 0 0 0 0
-Mir1958 0 0 0 0 0 0 0 0
-Mir1960 0 6 7 15 0 1 1 6
-Mir1961 0 0 0 0 0 0 0 0
-Mir1962 0 0 0 0 0 0 0 0
-Mir1963 0 0 0 0 0 0 0 0
-Mir1964 9 22 13 19 11 8 13 10
-Mir1965 0 1 0 1 2 0 0 1
-Mir1966 2 0 1 3 1 1 0 0
-Mir1967 0 0 0 0 0 0 0 0
-Mir1968 11 0 0 4 4 8 5 1
-Mir1969 0 0 0 0 0 0 0 0
-Mir196a-1 0 0 0 0 0 0 0 0
-Mir196a-2 0 0 0 0 0 0 0 0
-Mir196b 0 2 0 2 1 0 2 3
-Mir1970 1 0 0 0 0 6 0 0
-Mir1971 0 0 0 0 0 0 0 0
-Mir1981 81 27 18 32 42 23 54 18
-Mir1982 3 0 4 1 4 2 2 1
-Mir1983 0 30 15 28 0 0 0 28
-Mir199a-1 4 3 0 2 2 4 3 0
-Mir199a-2 8 61 50 131 10 3 11 78
-Mir199b 4 73 64 143 1 0 4 81
-Mir19a 66 15 14 26 24 35 36 7
-Mir19b-1 1 0 1 0 1 0 0 0
-Mir19b-2 5 0 1 1 1 2 3 0
-Mir1a-1 0 4 5 24 0 0 0 9
-Mir1a-2 0 2 1 16 0 0 1 3
-Mir1b 0 2 1 16 0 0 1 3
-Mir200a 130 0 0 1 53 33 47 0
-Mir200b 496 4 0 3 164 66 155 0
-Mir200c 24 1 1 5 3 2 5 2
-Mir201 0 5 15 28 0 0 0 15
-Mir202 0 0 0 0 0 0 0 0
-Mir203 1919 231 243 500 1276 993 1349 228
-Mir204 5 571 549 923 2 1 9 541
-Mir205 9 0 0 0 2 0 2 0
-Mir206 0 0 0 2 0 0 2 1
-Mir207 0 0 0 0 0 0 0 0
-Mir208a 0 1060 956 1693 0 0 1 928
-Mir208b 1 2049 1647 8904 0 0 0 2155
-Mir20a 100 46 44 193 55 41 101 63
-Mir20b 2 0 1 1 0 0 0 0
-Mir21 66353 4621 3603 12563 44582 43237 50530 3631
-Mir210 70 81 45 244 20 37 36 59
-Mir211 1 0 0 1 3 1 0 0
-Mir212 13 54 34 74 4 4 14 35
-Mir2136 0 0 0 0 0 0 0 0
-Mir2137 1 2 0 0 0 0 0 3
-Mir214 45 181 163 358 26 17 29 229
-Mir215 56 207 230 393 31 28 36 201
-Mir216a 0 0 0 0 0 0 0 0
-Mir216b 0 0 0 0 0 0 0 0
-Mir217 0 0 0 1 0 0 0 0
-Mir218-1 0 1 1 3 0 0 0 2
-Mir218-2 0 0 0 2 0 0 0 1
-Mir219-1 20 6 4 21 10 7 14 8
-Mir219-2 0 1 0 0 0 0 0 0
-Mir22 264828 200828 157532 497412 178009 71407 194665 186766
-Mir221 781 737 612 1686 382 371 486 604
-Mir222 252 234 166 588 146 122 147 185
-Mir223 119 98 109 214 103 53 139 93
-Mir22hg 264833 200829 157535 497415 178026 71418 194669 186766
-Mir23a 435 1934 1611 3561 229 218 327 1803
-Mir23b 1523 2741 2199 5277 757 611 734 2545
-Mir24-1 5 33 26 69 7 6 4 39
-Mir24-2 162 644 462 1374 127 65 140 496
-Mir25 2953 1818 1415 3508 2037 3417 2635 1810
-Mir26a-1 46 46 25 66 35 13 33 38
-Mir26a-2 17 10 3 31 29 11 22 8
-Mir26b 9835 3591 3120 8413 6687 4515 7017 3488
-Mir27a 949 4009 3588 7668 628 400 760 3884
-Mir27b 49450 96357 77514 215408 34471 24893 34934 92281
-Mir28 0 0 0 0 0 0 0 0
-Mir2861 0 0 0 0 0 0 0 0
-Mir28b 0 0 0 0 0 0 0 0
-Mir28c 0 0 0 0 0 0 0 0
-Mir290 1 0 0 0 0 1 0 0
-Mir291a 10 0 0 0 8 4 2 0
-Mir291b 0 0 0 0 0 0 0 0
-Mir292 25 0 0 0 8 1 7 0
-Mir293 0 0 0 0 0 0 0 0
-Mir294 1 0 0 0 0 1 2 0
-Mir295 0 0 0 0 0 2 1 0
-Mir296 3 1 0 3 0 1 0 3
-Mir297-1 0 0 0 0 0 0 0 0
-Mir297-2 11 5 1 3 6 16 4 1
-Mir297a-3 0 5 3 12 0 1 4 7
-Mir297a-4 0 0 0 0 0 0 0 0
-Mir297b 0 0 0 0 0 0 0 0
-Mir297c 0 7 6 0 0 0 0 3
-Mir298 1 6 2 20 0 1 0 7
-Mir299 7 7 5 12 4 2 3 3
-Mir29a 4905 3937 3452 8384 3490 1455 3626 3832
-Mir29b-1 0 1 3 1 4 1 0 0
-Mir29b-2 5 3 5 15 0 2 5 6
-Mir29c 1073 655 578 1463 624 245 733 667
-Mir300 53 22 18 72 20 2 6 29
-Mir301 196 329 266 665 120 88 155 300
-Mir301b 3 4 2 1 2 1 0 1
-Mir302a 0 0 0 0 0 0 0 0
-Mir302b 0 0 0 0 0 0 0 0
-Mir302c 0 0 0 0 0 0 0 0
-Mir302d 0 0 0 0 0 0 0 0
-Mir3057 21 37 42 54 25 9 12 44
-Mir3058 0 2 3 1 0 2 1 0
-Mir3059 0 0 0 0 0 0 0 0
-Mir3060 3 1 1 8 1 0 2 3
-Mir3061 12 11 19 33 10 3 11 20
-Mir3062 0 0 0 0 0 0 0 0
-Mir3063 0 0 0 0 0 0 0 0
-Mir3064 0 0 0 0 0 0 1 2
-Mir3065 61 62 54 90 52 13 53 84
-Mir3066 0 2 1 0 2 1 0 2
-Mir3067 0 0 0 0 0 0 0 0
-Mir3068 75 47 32 151 34 36 29 27
-Mir3069 4 1 0 0 0 2 2 0
-Mir3070a 0 0 0 0 0 0 0 0
-Mir3070b 0 0 0 0 0 0 0 0
-Mir3071 132 80 76 300 36 13 27 89
-Mir3072 0 0 0 0 0 0 0 0
-Mir3073 341 0 0 0 218 131 214 0
-Mir3074-1 5 33 26 69 7 6 4 39
-Mir3074-2 162 644 462 1374 127 65 140 496
-Mir3075 0 0 0 0 0 0 0 0
-Mir3076 2 2 2 9 0 0 1 1
-Mir3077 1 0 0 0 0 0 0 0
-Mir3078 0 0 0 0 0 0 0 0
-Mir3079 0 0 0 0 0 0 0 0
-Mir3081 0 0 1 0 0 0 0 2
-Mir3082 10 15 12 24 13 11 11 16
-Mir3083 0 0 0 1 0 0 0 0
-Mir3085 0 0 0 0 0 0 0 0
-Mir3086 2 2 2 5 0 1 1 2
-Mir3087 0 3 1 1 2 0 0 1
-Mir3088 0 0 0 0 0 0 0 0
-Mir3089 0 0 2 2 0 0 0 0
-Mir3091 0 0 0 2 0 0 0 0
-Mir3092 0 0 1 0 0 1 0 0
-Mir3093 0 0 0 0 0 0 0 0
-Mir3094 0 0 0 0 0 0 0 0
-Mir3095 0 1 0 1 0 0 0 0
-Mir3096 2 0 0 0 1 2 1 0
-Mir3096b 45 54 50 161 29 34 29 33
-Mir3097 0 0 0 2 0 0 0 0
-Mir3098 66 12 15 20 20 84 35 7
-Mir3099 0 0 0 0 0 0 0 0
-Mir30a 91372 54163 51417 115733 63661 65778 70304 53479
-Mir30b 1314 1218 1113 3381 702 447 673 1163
-Mir30c-1 79 101 89 201 51 35 61 115
-Mir30c-2 224 116 88 333 139 196 168 81
-Mir30d 16033 20818 18856 57546 10892 5850 11804 19931
-Mir30e 15854 23486 20880 76780 10732 5390 11456 22218
-Mir31 716 54 38 180 381 218 444 47
-Mir3100 0 0 0 4 0 0 0 0
-Mir3101 0 0 0 0 0 0 0 0
-Mir3102 0 23 14 29 1 0 1 19
-Mir3103 0 0 0 2 1 0 1 0
-Mir3104 0 0 0 0 0 0 0 0
-Mir3106 0 0 0 0 0 0 0 0
-Mir3107 789 2612 2768 3959 621 2005 1564 2555
-Mir3108 0 0 0 0 0 0 0 0
-Mir3109 0 0 1 0 0 0 0 1
-Mir3110 0 0 0 0 0 0 0 0
-Mir3112 0 0 0 0 0 0 0 0
-Mir32 48 19 13 55 36 29 46 28
-Mir320 182 182 165 643 106 80 113 180
-Mir322 261 1359 1130 2549 228 91 224 1232
-Mir323 0 0 0 0 0 0 0 0
-Mir324 10 42 30 98 5 16 15 32
-Mir325 0 0 0 0 0 0 0 0
-Mir326 28 12 12 34 13 17 11 17
-Mir328 304 399 274 549 151 125 194 366
-Mir329 0 2 3 7 2 0 1 3
-Mir33 36 4 8 17 16 10 22 5
-Mir330 25 31 27 70 16 17 19 26
-Mir331 49 54 40 98 35 17 23 43
-Mir335 138 185 203 286 101 72 138 195
-Mir337 7 10 7 14 5 0 2 5
-Mir338 61 62 54 90 52 13 53 84
-Mir339 144 38 37 105 87 71 65 52
-Mir340 1203 288 238 1058 738 1380 755 246
-Mir341 2 1 2 2 0 2 0 1
-Mir343 0 0 0 0 0 0 0 0
-Mir344 0 0 0 0 0 0 0 0
-Mir344-2 0 0 0 0 0 0 0 0
-Mir344b 0 0 0 1 0 0 0 0
-Mir344c 0 0 0 0 0 0 0 0
-Mir344d-1 0 0 0 0 0 0 0 0
-Mir344d-2 0 0 0 0 0 0 0 0
-Mir344d-3 0 0 0 0 0 0 0 0
-Mir344e 0 0 0 0 0 0 0 0
-Mir344f 0 0 0 0 0 0 0 0
-Mir344g 0 0 0 0 0 0 0 0
-Mir345 176 125 119 273 76 83 76 114
-Mir346 0 0 0 0 0 1 0 0
-Mir3470a 23 5 1 5 2 19 5 1
-Mir3470b 46 0 4 0 27 36 19 0
-Mir3471-1 56 57 56 162 30 39 32 37
-Mir3473 1 1 1 0 1 0 1 1
-Mir3473c 0 0 0 0 0 0 0 0
-Mir3473d 0 0 0 0 0 0 0 0
-Mir3474 0 0 0 0 0 0 0 0
-Mir3475 0 0 0 0 0 0 0 0
-Mir34a 12 25 27 61 6 10 11 28
-Mir34b 3 8 6 31 0 0 0 6
-Mir34c 5 30 21 611 2 6 3 37
-Mir350 26 36 17 57 8 8 7 13
-Mir351 729 848 687 1031 591 314 745 747
-Mir3572 0 0 0 1 0 0 0 0
-Mir362 40 15 9 34 26 5 26 14
-Mir363 4 0 2 0 0 1 6 0
-Mir365-1 0 0 0 0 0 0 0 0
-Mir365-2 10 0 0 4 4 4 3 0
-Mir367 0 0 0 0 0 0 0 0
-Mir369 5 1 1 10 4 0 2 3
-Mir370 0 0 0 0 0 0 0 1
-Mir374 76 28 27 32 32 37 49 42
-Mir374c 76 28 27 32 32 37 49 42
-Mir375 46 1 1 1 27 26 21 0
-Mir376a 0 1 1 1 0 0 1 1
-Mir376b 16 2 4 11 5 1 0 3
-Mir376c 2 0 0 0 0 0 1 0
-Mir377 0 1 0 1 2 0 0 4
-Mir378 138 608 565 1901 90 123 106 544
-Mir378b 0 0 3 5 0 0 0 0
-Mir379 20 24 23 51 7 5 4 19
-Mir380 1 1 0 0 0 0 0 1
-Mir381 60 28 27 71 20 24 15 18
-Mir382 2 1 1 4 1 1 1 1
-Mir383 0 0 0 1 0 0 0 0
-Mir384 0 1 0 2 0 0 0 1
-Mir3960 0 0 0 0 0 0 0 0
-Mir3962 0 0 0 0 0 0 0 0
-Mir3963 0 0 0 0 0 0 0 0
-Mir3964 0 0 0 0 0 0 0 0
-Mir3965 0 0 0 0 0 0 0 0
-Mir3966 0 0 0 0 0 0 0 0
-Mir3967 0 0 0 0 0 0 0 0
-Mir3968 0 1 0 0 0 1 0 0
-Mir3969 0 0 0 0 0 0 0 0
-Mir3970 0 0 0 0 0 0 0 0
-Mir3971 0 0 0 0 0 0 0 0
-Mir409 26 13 8 28 14 8 8 9
-Mir410 45 24 33 47 21 9 12 17
-Mir411 514 205 226 599 202 79 119 252
-Mir412 0 0 0 0 0 0 0 0
-Mir421 0 0 0 0 0 0 0 0
-Mir423 1203 665 425 1822 1016 351 983 532
-Mir425 308 139 111 323 234 95 246 127
-Mir429 265 3 1 3 82 41 101 3
-Mir431 9 6 5 12 1 0 0 3
-Mir432 0 0 0 0 0 0 0 0
-Mir433 0 1 2 5 0 0 0 9
-Mir434 162 66 56 161 65 13 44 56
-Mir448 0 0 0 0 0 0 0 0
-Mir449a 0 0 1 3 0 0 0 1
-Mir449b 0 0 0 0 0 0 0 0
-Mir449c 0 0 1 0 0 0 0 0
-Mir450-1 0 0 0 0 0 0 0 0
-Mir450-2 0 0 0 0 0 0 2 0
-Mir450b 17 34 27 67 19 4 14 23
-Mir451 3346 2299 1479 5278 2093 2330 4863 2146
-Mir452 0 0 0 1 0 0 0 0
-Mir453 0 0 0 0 0 0 0 0
-Mir455 235 23 18 60 197 107 237 18
-Mir463 2 0 0 0 3 1 1 0
-Mir465 3 0 0 0 1 0 0 0
-Mir465b-1 0 0 0 0 0 0 0 0
-Mir465b-2 0 0 0 0 0 0 0 0
-Mir465c-1 0 0 0 0 0 0 0 0
-Mir465c-2 0 0 0 0 0 0 0 0
-Mir466 0 0 0 0 0 0 0 0
-Mir4660 7 1 3 1 0 10 1 3
-Mir466b-2 0 0 0 0 0 0 0 0
-Mir466b-3 0 0 0 0 0 0 0 0
-Mir466d 0 0 0 0 0 2 1 1
-Mir466f-1 0 1 1 0 0 0 0 0
-Mir466f-2 0 0 1 0 0 0 2 0
-Mir466f-3 53 2 1 3 4 63 6 2
-Mir466g 24 2 1 0 2 9 0 0
-Mir466h 0 0 0 0 0 0 0 0
-Mir466i 0 0 0 0 0 0 0 0
-Mir466n 23 3 1 0 4 28 1 4
-Mir467a-1 0 0 0 0 0 0 0 0
-Mir467a-10 0 0 0 0 0 0 0 0
-Mir467a-2 0 0 0 0 0 0 0 0
-Mir467a-3 0 0 0 0 0 0 0 0
-Mir467a-4 0 0 0 0 0 0 0 0
-Mir467a-5 0 0 0 0 0 0 0 0
-Mir467a-6 0 0 0 0 0 0 0 0
-Mir467a-7 0 0 0 0 0 0 0 0
-Mir467a-8 0 0 0 0 0 0 0 0
-Mir467a-9 0 0 0 0 0 0 0 0
-Mir467b 0 0 0 0 0 0 0 0
-Mir467c 12 1 0 1 3 14 3 1
-Mir467d 0 5 2 11 0 1 4 4
-Mir467e 0 0 0 0 0 0 0 0
-Mir467f 0 0 0 2 0 0 0 0
-Mir468 0 0 0 0 0 0 0 0
-Mir470 41 1 1 0 33 34 47 0
-Mir471 0 0 0 0 0 1 0 0
-Mir483 0 1 2 2 0 0 0 2
-Mir484 285 268 224 422 224 101 288 240
-Mir485 1 1 0 7 2 0 0 2
-Mir486 789 2612 2768 3959 621 2005 1564 2555
-Mir487b 0 0 1 2 0 0 1 0
-Mir488 1 26 6 34 1 1 0 9
-Mir489 0 0 0 0 0 0 0 0
-Mir490 3 353 311 750 1 0 1 322
-Mir491 0 1 1 1 0 1 1 0
-Mir493 0 1 0 0 0 0 0 0
-Mir494 0 0 0 0 0 0 0 1
-Mir495 1 1 2 2 0 0 0 1
-Mir496 4 2 0 2 2 0 2 1
-Mir497 66 198 182 195 47 27 48 200
-Mir499 0 869 730 4147 0 0 0 781
-Mir500 10 5 4 13 7 1 2 5
-Mir501 72 62 36 8 66 29 88 34
-Mir503 7 12 16 23 6 7 4 13
-Mir504 0 12 6 34 0 0 0 17
-Mir5046 0 0 0 0 0 0 0 0
-Mir505 3 2 1 1 2 2 4 1
-Mir509 0 0 0 0 0 0 0 0
-Mir5097 0 0 0 0 0 0 0 0
-Mir5098 0 0 0 0 0 0 0 0
-Mir5100 6 1 1 2 1 1 4 2
-Mir5101 0 0 0 1 0 0 0 0
-Mir5103 0 0 0 1 0 0 0 0
-Mir5104 0 0 0 0 0 0 0 0
-Mir5106 0 0 0 0 0 0 0 0
-Mir5107 1 0 0 1 0 0 1 0
-Mir5108 0 0 0 0 0 0 0 0
-Mir5109 548 29 12 106 40 478 46 23
-Mir511 57 7 9 16 35 19 36 4
-Mir5112 0 0 0 0 0 0 0 0
-Mir5113 2 1 0 1 0 2 1 1
-Mir5114 2 0 2 1 0 0 1 0
-Mir5115 0 0 0 0 0 0 0 0
-Mir5116 0 0 0 0 0 2 0 0
-Mir5117 22 11 21 39 16 14 7 23
-Mir5119 0 0 0 0 0 0 0 0
-Mir5120 0 0 0 0 0 0 0 0
-Mir5121 8 1 1 5 11 7 4 0
-Mir5122 6 3 2 2 4 1 4 3
-Mir5123 0 0 0 0 0 0 0 0
-Mir5124 0 0 0 0 0 0 0 0
-Mir5125 0 0 1 0 0 0 0 0
-Mir5126 0 0 0 0 0 0 0 0
-Mir5127 0 0 0 0 0 0 0 0
-Mir5128 7 0 0 2 0 8 1 2
-Mir5129 0 0 1 1 1 1 2 2
-Mir5130 0 0 0 1 0 1 0 0
-Mir5131 1 0 0 0 0 0 1 0
-Mir5132 0 0 0 1 0 0 1 1
-Mir5133 0 0 0 0 0 0 2 0
-Mir5134 0 0 0 0 0 0 0 0
-Mir5135 1 0 0 0 0 1 0 0
-Mir5136 0 0 0 0 0 0 0 0
-Mir532 612 227 235 434 332 528 384 258
-Mir539 0 0 0 0 0 0 0 0
-Mir540 4 2 4 8 2 0 0 5
-Mir541 483 121 124 320 188 48 123 146
-Mir542 20 23 32 75 15 23 15 22
-Mir543 0 0 1 0 0 0 0 0
-Mir544 0 0 0 0 0 0 0 0
-Mir546 0 0 0 0 0 0 0 0
-Mir547 0 15 8 10 0 0 0 9
-Mir551b 4 0 0 0 2 1 3 0
-Mir568 0 0 0 0 0 0 0 0
-Mir574 0 0 1 0 0 0 0 0
-Mir582 4 383 36 103 2 4 5 29
-Mir592 28 1 0 0 15 8 18 0
-Mir598 8 2 2 11 8 2 6 5
-Mir599 0 0 0 0 0 0 0 0
-Mir615 3 0 0 0 0 0 0 0
-Mir653 2 0 0 2 6 3 1 1
-Mir654 0 0 0 0 0 0 0 0
-Mir664 75 79 63 156 53 38 70 98
-Mir665 0 0 0 1 0 0 0 0
-Mir666 0 2 2 1 0 0 1 3
-Mir667 2 0 1 0 1 0 0 2
-Mir668 1 4 2 5 0 0 0 3
-Mir669a-1 3 2 0 2 2 1 1 3
-Mir669a-10 0 1 0 0 0 0 0 2
-Mir669a-11 0 1 0 0 0 0 0 2
-Mir669a-12 0 1 0 0 0 0 0 2
-Mir669a-2 0 0 0 0 0 0 0 0
-Mir669a-3 0 0 0 0 0 0 0 0
-Mir669a-4 0 1 0 0 0 0 0 2
-Mir669a-5 0 1 0 0 0 0 0 2
-Mir669a-6 0 1 0 0 0 0 0 2
-Mir669a-7 0 1 0 0 0 0 0 2
-Mir669a-8 0 1 0 0 0 0 0 2
-Mir669a-9 0 1 0 0 0 0 0 2
-Mir669b 0 0 2 1 0 0 0 0
-Mir669c 0 0 0 0 0 0 0 0
-Mir669e 2 0 1 1 1 4 4 0
-Mir669g 0 0 0 0 0 0 0 0
-Mir669h 0 0 0 0 0 0 0 1
-Mir669i 0 0 0 0 0 0 0 0
-Mir669j 0 0 0 0 0 0 0 0
-Mir669k 0 0 0 0 0 0 0 0
-Mir669m-1 0 0 3 0 0 0 0 0
-Mir669m-2 0 0 0 0 0 0 0 0
-Mir669p-1 0 1 0 0 0 0 0 2
-Mir669p-2 0 1 0 0 0 0 0 2
-Mir670 0 0 0 0 0 0 0 0
-Mir671 169 83 61 161 157 137 149 56
-Mir672 2 0 0 1 0 0 0 2
-Mir673 6 8 6 11 3 4 3 10
-Mir674 25 69 44 132 22 11 37 52
-Mir675 0 1 1 0 0 0 0 0
-Mir676 188 146 100 364 136 143 148 138
-Mir677 14 16 12 17 6 11 12 6
-Mir678 0 0 0 0 0 0 0 0
-Mir679 0 0 0 0 2 0 0 1
-Mir680-2 50 2 6 4 17 45 9 1
-Mir680-3 0 0 0 0 0 0 0 0
-Mir681 0 0 0 0 0 0 0 0
-Mir682 0 0 0 0 0 0 0 0
-Mir683-1 0 0 0 0 0 0 0 0
-Mir683-2 0 0 0 0 0 0 0 0
-Mir684-1 0 0 0 0 0 0 0 0
-Mir684-2 0 0 0 0 0 0 0 0
-Mir686 0 0 0 0 0 0 0 0
-Mir687 0 0 0 0 0 0 0 0
-Mir688 1 0 0 0 0 0 0 0
-Mir690 0 0 0 0 0 0 0 0
-Mir691 0 0 0 0 0 0 0 0
-Mir692-1 0 0 0 0 0 0 0 1
-Mir693 0 0 0 0 0 0 0 0
-Mir694 0 0 0 1 0 0 0 0
-Mir695 0 0 0 0 0 0 0 0
-Mir697 0 0 0 0 0 0 0 0
-Mir698 0 0 0 0 0 0 0 0
-Mir7-1 10 13 10 17 12 10 13 11
-Mir7-2 0 0 0 0 0 0 0 0
-Mir700 5 32 51 31 6 2 10 40
-Mir701 0 2 2 0 0 0 0 0
-Mir702 3 2 1 4 0 2 0 0
-Mir703 0 0 0 0 0 0 0 0
-Mir704 2 0 0 0 1 2 2 0
-Mir705 0 0 0 0 0 0 0 0
-Mir706 0 0 0 0 0 0 0 0
-Mir707 0 0 0 0 0 0 0 0
-Mir708 1 6 0 7 1 0 0 1
-Mir709 0 0 0 0 0 0 0 0
-Mir710 0 0 0 0 0 0 0 0
-Mir711 0 0 0 0 0 0 0 0
-Mir713 0 0 0 0 0 0 0 0
-Mir717 0 0 0 0 0 0 0 0
-Mir718 0 0 0 0 0 0 0 0
-Mir719 0 0 0 0 0 0 0 0
-Mir721 0 0 0 0 0 0 0 0
-Mir741 10 0 0 0 11 4 10 1
-Mir742 0 0 0 0 0 0 0 0
-Mir743 1 0 0 0 0 0 0 0
-Mir743b 3 0 0 0 1 1 2 0
-Mir744 439 148 132 510 320 187 322 117
-Mir758 0 1 0 0 2 0 0 0
-Mir759 0 0 0 0 0 0 0 0
-Mir760 1 0 1 0 0 0 0 0
-Mir761 0 0 0 0 0 0 0 0
-Mir762 0 0 0 0 0 0 0 0
-Mir764 0 0 0 0 0 0 0 0
-Mir767 0 0 0 0 0 0 0 0
-Mir770 0 0 0 0 0 0 0 0
-Mir7b 0 0 0 1 0 0 0 0
-Mir802 552 0 0 0 401 209 352 0
-Mir804 0 0 0 0 0 0 0 0
-Mir871 82 3 1 1 81 29 93 0
-Mir872 182 72 66 164 124 65 118 68
-Mir873 0 1 0 0 0 0 0 0
-Mir874 77 45 46 39 66 36 87 43
-Mir875 0 0 0 0 0 0 0 0
-Mir876 0 0 0 0 0 0 0 0
-Mir877 6 3 4 5 7 1 11 8
-Mir878 3 0 0 0 1 5 4 0
-Mir879 3 3 1 6 1 2 1 2
-Mir880 0 0 0 0 0 1 3 0
-Mir881 14 0 0 0 8 13 29 0
-Mir882 0 0 0 0 0 0 0 0
-Mir883a 1 0 0 0 0 0 0 0
-Mir883b 0 0 0 0 0 0 0 0
-Mir9-1 0 0 0 0 0 0 0 0
-Mir9-2 0 0 0 0 0 0 0 0
-Mir9-3 0 0 0 0 0 0 0 0
-Mir92-1 32320 7428 6690 16161 24182 24855 25904 7910
-Mir92-2 766 275 195 274 524 307 655 242
-Mir92b 50 32 27 60 12 9 14 33
-Mir93 1530 647 480 1397 939 691 1194 602
-Mir96 10 0 0 0 6 1 7 0
-Mir98 542 407 354 1512 256 305 374 390
-Mir99a 1194 4059 3196 2976 937 468 1037 3708
-Mir99b 2542 10307 6673 2801 2017 1131 2339 7276
-Mira 0 0 0 0 0 0 0 0
-Mirg 565 164 166 414 234 65 147 185
-Mirlet7a-1 83 29 24 89 58 36 68 32
-Mirlet7a-2 35 12 12 37 17 15 18 12
-Mirlet7b 1276 1343 1028 2983 786 655 812 1129
-Mirlet7c-1 74 69 51 151 41 45 50 55
-Mirlet7c-2 154 75 72 218 88 75 97 82
-Mirlet7d 2117 2083 1725 5400 1315 797 1470 1940
-Mirlet7e 114 233 160 648 76 64 85 196
-Mirlet7f-1 107 97 74 205 78 79 69 70
-Mirlet7f-2 2424 746 670 3360 1668 2325 2093 747
-Mirlet7g 7561 2760 2343 10488 4736 2670 5047 2547
-Mirlet7i 2525 3013 2408 9794 1507 2235 1991 2769
-Mllt10 22 4 4 2 4 26 10 4
-Mospd4 0 0 0 0 0 0 0 0
-Mphosph9 4 0 0 0 1 0 1 1
-Mrpl15 4 1 2 1 1 4 1 2
-Mrpl48 3 2 1 0 1 1 3 0
-Msx1as 0 0 0 0 0 0 0 0
-Mtag2 0 0 0 0 0 0 0 0
-Mtf2 9 1 0 3 0 1 0 1
-Mtfr1 10 0 1 1 2 22 4 0
-Mthfr 1 0 0 1 0 1 0 0
-Mtmr2 20 67 71 276 15 43 27 61
-Mug-ps1 24 0 0 0 0 7 0 0
-Mvd 0 0 0 0 0 0 0 0
-Mx1 0 0 0 0 0 0 0 0
-Mx2 0 0 0 0 0 0 0 0
-Myeov2 3 0 0 1 0 1 0 0
-Nagpa 6 1 0 1 5 7 4 0
-Ncaph2 14 1 0 0 5 16 1 2
-Ncrna00086 0 0 0 0 0 0 0 0
-Nctc1 0 1 0 0 0 0 0 0
-Ndufs6 3 0 0 1 0 5 0 1
-Neat1 21 5 7 4 1 14 7 6
-Nespas 0 1 0 0 0 0 0 0
-Ngrn 1 0 1 0 1 0 1 0
-Nip7 0 0 0 0 0 3 0 0
-Nkx2-2as 0 0 0 0 0 0 0 0
-Nkx6-2 0 1 2 1 1 0 0 0
-Nlrp1c-ps 0 0 0 0 0 0 0 0
-Nlrp5-ps 5 0 0 0 1 25 3 0
-Nnt 35 11 10 7 0 44 6 8
-Nol8 6 0 0 2 0 4 0 2
-Npff 0 0 0 0 0 0 0 0
-Nphs1as 0 0 0 0 0 0 0 0
-Npm3-ps1 0 0 0 0 0 0 0 0
-Nron 0 0 0 0 0 0 0 0
-Nt5c2 7 1 0 3 3 11 0 1
-Numb 20 4 2 6 8 30 8 2
-Nup88 3 1 1 3 0 7 0 0
-Nutf2-ps1 0 0 0 1 0 1 0 0
-Oas1b 0 0 1 0 0 2 0 0
-Oaz1-ps 5 2 6 2 11 7 4 4
-Olfr1077-ps1 0 0 0 0 0 0 0 0
-Olfr1300-ps1 0 0 0 0 0 0 0 0
-Olfr1372-ps1 0 0 0 0 0 0 0 0
-Olfr29-ps1 0 0 0 0 0 0 0 0
-Olfr421-ps1 0 0 0 0 0 0 0 0
-Olfr75-ps1 0 0 0 0 0 0 0 0
-Olfr856-ps1 0 0 0 1 0 1 0 0
-Olfr947-ps1 0 0 0 0 0 0 0 0
-Oprl1 0 0 0 0 0 0 0 0
-Orc4 1 2 0 1 1 4 0 0
-Orc6 1 1 0 0 1 1 1 0
-Osbpl1a 9 0 2 1 1 36 0 3
-Otub2 0 0 0 0 0 2 1 0
-Otx2os1 1 0 1 0 0 0 0 0
-Oxsr1 9 1 1 1 0 10 1 1
-Pafah1b1 8 3 3 2 0 16 4 4
-Parp6 8 0 2 4 0 8 2 0
-Patz1 0 0 0 2 0 0 0 0
-Pax6os1 0 0 0 0 0 0 0 0
-Pcdh11x 2 0 0 0 0 0 0 0
-Pdxk-ps 0 0 0 0 0 0 0 0
-Pea15b 0 0 0 0 0 0 0 0
-Peg13 3 0 1 1 0 4 0 2
-Peg3as 0 0 0 0 0 0 0 0
-Pex11b 4 0 0 2 0 4 0 0
-Pex16 12 0 0 1 2 7 8 0
-Pfkfb2 3 1 3 3 0 8 1 2
-Pglyrp2 12 0 0 0 0 15 0 0
-Phc1 0 0 0 0 0 1 0 0
-Phf21b 0 0 1 0 0 0 0 0
-Phxr4 0 0 0 0 0 0 0 0
-Phyhd1 5 0 0 0 1 12 2 0
-Pinc 0 1 0 1 0 0 0 1
-Pisd-ps1 0 0 0 0 0 0 0 0
-Pisd-ps2 0 0 0 1 0 0 0 0
-Pisd-ps3 4 1 1 2 0 5 2 0
-Pitpnm1 1 0 0 0 0 0 0 0
-Pknox1 6 0 0 0 2 7 1 0
-Pla2g2a 0 0 0 0 0 0 0 0
-Plcxd1 1 0 0 1 0 0 0 0
-Pldi 0 0 0 0 0 0 0 0
-Plk4 0 0 0 0 0 1 0 0
-Plscr3 1 0 1 1 1 0 0 0
-Pnpla2 10 4 1 1 1 8 5 2
-Polg2 0 0 0 0 2 2 0 0
-Ppargc1a 3 1 2 3 0 8 1 0
-Ppifos 3 0 0 2 0 6 0 4
-Ppp1r12b 0 0 2 0 0 1 0 0
-Ppp1r2-ps3 0 0 0 0 0 0 0 0
-Ppp1r2-ps7 0 0 0 0 0 0 0 0
-Ppp1r2-ps9 0 0 0 0 0 0 0 0
-Ppp2r2b 0 0 1 0 0 0 0 1
-Ppp2r3d 2 0 0 0 0 0 0 0
-Ppp4r1l-ps 2 0 0 1 0 5 0 0
-Pradc1 0 0 1 0 2 4 0 0
-Pram1 0 0 0 0 0 1 0 0
-Prl8a6 0 0 0 0 0 0 0 0
-Prmt1 5 1 0 2 0 2 0 0
-Prmt6 2 0 0 0 1 0 0 0
-Proc 28 0 0 0 2 50 3 0
-Prr18 0 0 0 0 0 0 0 0
-Prr3 0 0 0 0 0 0 0 0
-Psg-ps1 0 0 0 0 0 0 0 0
-Psmd2 19 2 0 3 0 29 3 2
-Pum2 16 1 4 2 0 26 2 1
-Pvt1 2 1 0 0 1 2 1 1
-R74862 5 0 0 1 2 3 2 2
-Rabggtb 5253 774 579 1602 3493 3501 3690 643
-Rad51d 28 8 4 12 8 28 4 0
-Ralgps2 15 1 2 0 1 10 1 0
-Ranbp3 10 0 2 0 2 5 1 1
-Rasgrp4 0 0 1 0 0 0 0 0
-Raver1-fdx1l 12 0 0 2 0 15 2 1
-Rbbp8 4 2 0 0 2 8 0 2
-Rbm18 1 2 4 0 0 3 2 0
-Rbm7 2 2 0 3 0 5 2 0
-Rbmx 48 17 9 75 33 33 12 13
-Rcbtb2 9 0 2 1 1 10 3 3
-Rchy1 4 0 1 0 1 4 1 0
-Rdh18-ps 0 0 0 0 0 2 0 0
-Rgag4 0 0 0 0 0 0 0 0
-Rhno1 0 0 2 0 0 2 0 0
-Rian 17 12 5 29 6 7 2 10
-Rit1 4 1 1 0 0 2 0 0
-Rmi1 1 1 0 1 0 4 1 0
-Rmrp 601 278 192 679 452 220 484 272
-Rmst 1 1 5 0 0 1 0 2
-Rn4.5s 0 0 0 0 0 0 0 0
-Rn45s 126292 30052 33600 12266 20627 87267 20102 30198
-Rnf126 2 1 0 0 1 1 0 0
-Rnf44 32 2 2 2 0 46 4 0
-Rnu11 104 8 12 30 11 116 8 8
-Rnu12 93 8 8 11 5 66 13 8
-Rnu6 0 0 0 0 0 0 0 0
-Rnu7 0 0 0 0 0 0 0 0
-Rnu73b 18 2 3 3 2 8 5 3
-Rpl22 14 2 0 4 0 14 4 2
-Rplp2-ps1 0 0 0 0 0 1 0 1
-Rpph1 125 10 15 40 48 103 74 15
-Rprl1 0 0 0 0 0 0 0 0
-Rprl2 0 0 0 0 0 0 0 0
-Rprl3 5 1 1 0 0 0 1 0
-Rps15a-ps4 0 0 0 0 0 0 0 0
-Rps15a-ps6 0 0 0 0 0 0 0 0
-Rps19-ps3 0 0 0 0 0 0 0 0
-Rps27 1 0 0 0 0 0 2 0
-Rps4y2 0 0 0 0 1 1 0 0
-Rreb1 46 3 4 9 3 42 4 2
-Rtel1 1 0 1 0 0 2 0 0
-Rubie 0 0 0 0 0 0 0 0
-Runx2 0 3 2 5 3 0 1 4
-Samd7 0 0 0 1 0 0 0 0
-Sapcd1 0 1 0 0 0 0 0 0
-Scarna10 7 0 2 5 3 4 1 1
-Scarna13 4 1 0 0 0 2 3 0
-Scarna17 2377 331 306 398 1752 1971 1752 337
-Scarna2 9 2 0 8 0 6 5 2
-Scarna3a 272 148 109 300 196 337 243 137
-Scarna3b 525 146 134 452 386 589 431 121
-Scarna6 589 90 88 224 500 317 495 95
-Scarna8 0 0 1 2 2 1 3 0
-Scarna9 21 10 5 3 7 8 8 5
-Scgb2b23-ps 0 0 0 0 0 0 0 0
-Schip1 0 6 6 1 0 1 0 3
-Scnn1b 0 20 5 11 0 0 0 9
-Sec14l1 0 1 0 2 0 0 0 1
-Sec16b 22 0 0 1 0 31 3 0
-Sec23b 1 1 0 0 0 5 0 0
-Sema6c 0 0 0 0 3 0 0 0
-Senp2 3 0 0 0 0 5 0 0
-Serp2 0 0 2 0 0 0 0 1
-Serpina3h 0 0 0 0 0 0 0 0
-Serpina4-ps1 145 0 0 0 19 117 14 0
-Sfpq 11 3 3 2 0 20 2 1
-Sgsm1 0 0 0 0 2 2 0 0
-Sh2d3c 2 2 3 1 0 2 1 2
-Six3os1 0 0 0 0 0 0 0 8
-Slc12a4 3 0 2 1 1 1 0 0
-Slc22a13b-ps 0 0 0 0 0 1 0 0
-Slc25a43 0 4 0 0 0 0 0 0
-Slc25a44 22 2 1 3 3 33 11 2
-Slc2a4rg-ps 0 0 0 0 0 0 2 0
-Slc35c2 2 0 0 0 0 3 0 0
-Slfn10-ps 0 0 0 0 0 0 0 0
-Slx1b 0 0 0 0 0 3 0 0
-Smarca5-ps 0 0 0 0 0 0 0 0
-Smim4 1 0 1 0 0 0 0 1
-Smok4a 0 0 0 0 0 0 0 0
-Smpx 0 0 0 2 0 0 0 2
-Snapc4 1 0 0 1 0 7 0 0
-Snhg1 8185 2277 1889 5095 5790 6478 5840 2283
-Snhg10 4 1 0 0 0 2 3 0
-Snhg12 1273 233 180 1043 811 922 743 198
-Snhg3 28 9 2 10 6 18 18 3
-Snhg4 7 4 6 11 3 3 3 10
-Snhg5 1 3 1 2 2 0 2 2
-Snhg6 390 145 138 191 236 256 215 191
-Snhg7 34 4 3 15 15 82 13 7
-Snhg8 42 7 5 14 36 19 33 8
-Snhg9 5 2 0 5 0 4 2 4
-Snora15 0 0 0 0 0 0 0 0
-Snora16a 121 12 16 75 44 113 70 13
-Snora17 32 3 3 12 9 82 8 6
-Snora19 0 0 0 0 0 0 0 0
-Snora20 4 1 0 3 1 7 2 0
-Snora21 3 2 0 3 4 4 3 1
-Snora23 8 0 0 1 0 5 0 0
-Snora24 42 7 5 14 33 19 32 8
-Snora26 6 0 1 0 2 1 2 1
-Snora28 25 3 5 5 7 13 8 5
-Snora2b 1 0 0 1 0 0 0 0
-Snora3 14 0 2 5 20 13 9 6
-Snora30 0 0 0 0 0 0 0 1
-Snora31 57 38 38 36 10 81 25 35
-Snora33 2 0 0 0 0 0 0 0
-Snora34 3 2 3 2 5 7 1 3
-Snora35 0 0 0 0 0 0 0 0
-Snora36b 76 79 63 156 53 38 70 98
-Snora41 90 32 20 85 38 25 85 19
-Snora43 1 1 0 3 2 0 0 0
-Snora44 159 76 73 81 82 107 88 58
-Snora47 4 1 1 2 1 2 1 1
-Snora52 24 4 4 13 16 23 13 8
-Snora5c 0 0 0 0 0 0 0 0
-Snora61 50 10 5 23 21 24 20 11
-Snora62 5 0 0 2 0 4 6 0
-Snora64 18 0 0 5 7 15 1 1
-Snora65 24 3 6 2 11 17 14 6
-Snora68 37 10 5 48 23 38 38 14
-Snora69 6 1 0 7 4 10 3 2
-Snora70 1 0 0 0 0 1 2 0
-Snora74a 7 2 5 11 0 2 2 7
-Snora75 4 0 0 3 0 2 0 1
-Snora78 5 2 0 5 0 4 2 4
-Snora7a 30 1 4 7 2 26 9 1
-Snora81 11 0 1 5 0 3 0 2
-Snord100 197 69 56 160 134 160 155 75
-Snord104 9351 886 720 2493 5610 7452 6017 929
-Snord11 150 8 14 47 59 53 54 14
-Snord110 443 266 226 297 338 266 373 262
-Snord111 23 6 4 13 14 10 6 6
-Snord116 0 0 0 0 0 0 0 0
-Snord116l1 0 0 0 0 0 0 0 0
-Snord116l2 0 0 0 0 0 0 0 0
-Snord118 0 0 0 0 0 0 0 0
-Snord12 534 115 104 602 380 354 356 121
-Snord123 10 16 11 42 2 6 6 9
-Snord14a 0 0 0 0 0 0 0 0
-Snord14c 0 0 0 0 0 0 0 0
-Snord14d 0 0 0 0 0 0 0 0
-Snord15a 20 4 3 5 10 9 4 2
-Snord15b 63 26 16 24 24 25 34 7
-Snord16a 136 5 5 29 24 130 30 9
-Snord17 326 116 78 148 228 85 269 110
-Snord19 366 148 118 333 314 465 338 121
-Snord1a 62 7 9 27 54 32 31 8
-Snord1b 14 3 4 4 2 5 3 2
-Snord1c 0 0 0 0 0 0 0 0
-Snord2 914 320 248 479 582 504 625 282
-Snord22 15 9 2 19 6 6 5 7
-Snord23 28 2 0 7 4 36 6 0
-Snord32a 505 164 116 501 394 378 418 170
-Snord33 649 189 195 310 598 709 602 190
-Snord34 34 4 3 13 21 15 19 1
-Snord35a 25 8 6 7 23 39 18 5
-Snord35b 5 3 1 0 1 2 3 0
-Snord37 134 39 32 89 113 74 80 44
-Snord38a 54 9 11 37 42 34 53 15
-Snord42a 61 93 100 30 31 20 35 68
-Snord42b 227 70 66 88 229 137 195 83
-Snord43 666 121 120 542 444 504 438 140
-Snord45b 620 98 72 138 458 244 499 70
-Snord45c 323 57 49 190 212 322 212 62
-Snord47 120 5 8 29 31 49 25 10
-Snord49a 232 84 51 256 151 120 145 75
-Snord49b 393 62 57 216 245 123 294 95
-Snord4a 324 50 39 155 196 165 191 31
-Snord52 4584 654 591 753 3716 3171 3941 649
-Snord53 65 21 11 57 50 23 51 12
-Snord55 462 124 101 450 309 255 250 119
-Snord57 1737 785 744 2031 1351 1445 1388 787
-Snord58b 46 85 81 3 44 29 49 57
-Snord61 46 16 8 75 31 32 12 13
-Snord64 24 22 19 48 13 19 35 17
-Snord65 29 74 90 8 17 19 15 68
-Snord66 884 267 281 340 693 807 696 244
-Snord67 39 4 1 17 18 13 11 5
-Snord68 1644 460 353 1060 1295 805 1310 376
-Snord69 440 157 105 401 341 407 333 117
-Snord7 6 1 0 1 0 0 0 2
-Snord70 23 6 11 16 10 6 14 6
-Snord71 93 20 20 38 51 26 64 29
-Snord72 159 21 24 57 102 123 101 16
-Snord73a 29 3 3 7 6 9 2 5
-Snord8 10 1 3 4 4 6 2 2
-Snord82 47 17 14 19 19 40 18 17
-Snord83b 48 22 12 35 22 34 32 16
-Snord85 3804 911 737 1422 3047 1133 3156 882
-Snord87 390 145 138 190 235 255 215 191
-Snord88a 96 69 73 77 62 101 59 52
-Snord88c 74 29 22 35 41 65 52 23
-Snord89 13 2 2 3 2 8 3 3
-Snord90 43 2 3 46 14 48 10 5
-Snord91a 363 40 29 81 256 358 285 25
-Snord92 23 9 5 17 8 29 7 8
-Snord93 45 54 50 161 29 34 29 33
-Snord95 708 217 195 326 483 675 444 210
-Snord96a 145 16 22 56 71 106 59 12
-Snord98 74 44 24 150 77 96 56 32
-Snord99 931 126 80 847 655 668 555 108
-Sox2ot 0 1 0 1 0 0 0 0
-Speer1-ps1 0 0 0 0 0 0 0 0
-Speer5-ps1 0 0 0 0 0 0 0 0
-Speer6-ps1 0 0 0 0 0 0 0 0
-Speer7-ps1 0 0 0 0 0 0 0 0
-Speer8-ps1 0 0 0 0 0 0 0 0
-Speer9-ps1 1 0 0 0 0 0 0 0
-Spn-ps 0 0 0 0 0 0 0 0
-Spns1 5 0 0 1 1 1 0 1
-Sprr2g 0 0 0 0 0 0 0 0
-Sprr2j-ps 0 0 0 0 0 0 0 0
-Sqrdl 35 1 0 1 4 58 3 0
-Sra1 7 0 0 0 2 4 6 0
-Srsf3 7 2 8 2 11 9 14 4
-Srsf7 1 1 0 0 0 5 0 1
-Srsf9 1 2 0 1 0 7 0 3
-St18 0 0 0 0 0 0 0 0
-St5 7 3 0 1 2 7 2 2
-St7l 8 1 1 1 3 12 4 2
-Stap2 10 0 2 2 1 6 4 0
-Stmn1-rs1 0 0 0 0 0 0 0 0
-Stoml1 0 0 0 0 0 0 0 0
-Stxbp3b 0 0 0 0 0 0 0 0
-Surf1 3 0 0 2 3 7 5 0
-Suv39h2 0 0 0 0 0 0 0 0
-Svip 1 0 2 0 0 1 0 0
-Syce2 6 0 0 0 0 19 1 0
-Sycp1-ps1 0 0 0 0 0 0 0 0
-Szrd1 40 4 0 2 16 40 4 2
-Taf1b 1 1 1 0 0 0 0 0
-Taf1d 357 53 56 156 174 341 230 54
-Tardbp 18 0 1 3 7 20 3 0
-Tbrg3 1 1 0 0 0 0 0 0
-Tcp10a 0 0 0 0 0 0 0 0
-Terc 22 1 0 0 18 10 15 0
-Thap6 2 0 2 2 1 1 0 0
-Tk2 1 2 0 2 1 1 3 0
-Tmem161b 0 0 0 0 2 2 4 0
-Tmem179b 8 0 0 0 0 8 0 0
-Tmem181b-ps 0 0 0 0 0 0 0 0
-Tmem181c-ps 0 0 0 0 0 0 0 0
-Tmem194b 0 0 1 0 1 0 0 0
-Tmem205 35 2 0 1 4 57 6 1
-Tmem41a 7 0 0 0 0 5 2 0
-Tmem51as1 1 0 0 0 0 2 0 0
-Tmem80 0 0 0 1 1 0 0 0
-Tor2a 2 0 0 0 0 11 3 0
-Tpsab1 0 0 0 0 0 0 0 0
-Trappc13 1 0 0 1 0 0 3 1
-Trim30e-ps1 0 0 0 0 0 0 0 0
-Trim52 0 0 0 0 0 0 0 0
-Trmt61b 11 0 0 0 2 5 0 0
-Trpc4 1 4 1 1 0 0 1 0
-Trpt1 2 0 0 0 0 2 0 0
-Trub2 0 0 0 0 0 0 0 0
-Tsix 0 0 0 0 0 4 0 0
-Tslp 0 0 0 1 0 0 0 0
-Tspy-ps 0 0 0 0 0 0 0 0
-Tsr2 0 0 1 0 0 2 0 0
-Tubb2a-ps2 0 0 0 0 0 0 0 0
-Tubgcp4 2 2 0 1 0 7 1 0
-Tug1 18 3 0 16 2 27 6 6
-Tyms 0 0 0 0 0 0 1 1
-Tyms-ps 0 0 0 0 0 0 0 0
-Tysnd1 2 0 0 0 1 7 3 0
-Tyw5 1 1 0 0 0 0 0 1
-U05342 20 0 1 3 3 24 3 0
-U90926 0 0 0 0 0 0 0 0
-Ube2w 3 1 2 1 1 3 1 0
-Ubl4 3 1 0 1 0 5 3 2
-Ubxn11 0 0 0 0 0 0 0 0
-Uchl1as 0 0 0 0 0 0 0 1
-Ufd1l 0 0 1 0 0 6 0 0
-Uqcc 5 0 2 1 0 8 1 1
-Vash2 0 0 0 0 0 0 0 0
-Vaultrc5 243 258 161 383 159 262 286 270
-Vax2os 0 0 0 0 0 0 0 0
-Vmn1r-ps79 0 0 0 0 0 0 0 0
-Vmn2r-ps11 0 0 0 1 0 0 0 0
-Vmn2r-ps129 0 0 0 0 0 0 0 0
-Vmn2r-ps159 0 0 0 0 0 0 0 0
-Vmn2r-ps54 0 0 1 0 0 0 0 0
-Vmn2r-ps60 0 0 0 0 0 0 0 0
-Vmn2r29 2 0 0 0 0 0 0 0
-Vps39 3 1 0 0 0 8 0 0
-Vsig8 194 50 35 100 99 74 109 50
-Wac 15 0 0 0 2 15 2 2
-Wbscr25 0 2 1 0 0 1 0 0
-Wdr13 2 2 1 3 0 1 0 3
-Wdr73 4 0 0 0 0 2 1 0
-Wiz 10 0 1 6 1 3 3 2
-Wls 1 1 0 3 2 0 0 1
-Wwp1 40 0 2 2 4 56 10 4
-Xist 0 0 0 0 0 8 0 0
-Yaf2 2 0 0 0 0 6 0 2
-Yars2 1 0 0 0 1 1 0 0
-Yipf2 1 0 0 1 0 10 0 0
-Ythdf3 16 4 1 4 3 19 3 2
-Zbtb24 1 0 0 1 0 0 0 0
-Zc3h14 11 1 0 0 1 2 2 2
-Zc3h7a 336 148 60 20 17 99 14 60
-Zf12 0 0 0 0 0 0 0 0
-Zfa-ps 0 0 0 0 0 0 0 0
-Zfhx2as 0 0 0 0 0 1 0 0
-Zfp133-ps 0 0 0 0 0 0 0 0
-Zfp207 5 0 2 0 0 9 1 2
-Zfp326 7 2 1 1 0 4 4 0
-Zfp389 0 0 0 0 0 0 0 0
-Zfp410 10 0 2 0 0 6 2 0
-Zfp414 1 0 0 0 0 4 0 0
-Zfp57 0 0 0 0 0 0 0 0
-Zfp572 0 0 0 0 0 0 0 0
-Zfp672 0 0 0 0 0 2 0 0
-Zfp783 0 0 0 0 0 0 0 0
-Zfp809 7 1 0 0 0 4 2 0
-Zfp821 0 0 0 2 2 0 0 0
-Zfp862 4 0 0 0 0 10 2 0
-Zim3 0 0 0 0 0 0 0 0
-Zmynd8 3 5 4 4 3 8 2 1
-Znf41-ps 0 0 0 0 0 0 0 0
-Zp4-ps 0 0 0 0 0 0 0 0
-Zscan4a 0 0 0 0 0 0 0 0
-Zxda 0 0 0 0 0 0 0 0
diff -r 5b6af671d985 -r 8051d14cf819 differential_count_models/tool_dependencies.xml
--- a/differential_count_models/tool_dependencies.xml Thu Aug 08 20:04:16 2013 -0400
+++ /dev/null Thu Jan 01 00:00:00 1970 +0000
@@ -1,35 +0,0 @@
-
-
-
- package_ghostscript_9_07
-
-
-
-
-
-
-
-
-
-
-
- $INSTALL_DIR
- echo "source('http://bioconductor.org/biocLite.R')" > $INSTALL_DIR/runme.R
- echo "installme=c('edgeR','limma','DESeq','DESeq2')" >> $INSTALL_DIR/runme.R
- echo "biocLite()" >> $INSTALL_DIR/runme.R
- echo "biocLite(installme)" >> $INSTALL_DIR/runme.R
- echo "install.packages(c('stringr','gplots'),dependencies=T,repos='http://cran.us.r-project.org')" >> $INSTALL_DIR/runme.R
- echo "quit(save='no')" >> $INSTALL_DIR/runme.R
- export PATH=$PATH && export R_HOME=$R_HOME && export R_LIBS=$R_LIBS && R CMD BATCH $INSTALL_DIR/runme.R
-
-
- Installs some basic bioc packages for the edgeR wrapper and dependencies graphicsmagick (replaces imagemagick) and ghostscript for compressing R's bloated pdfs
- It's clunky but this is the most convenient way I could get anything installed into the package_r3
- Note we use cran at fred hutch since no fastest mirror thingy
-
-
-
diff -r 5b6af671d985 -r 8051d14cf819 rgToolFactory.py
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/rgToolFactory.py Sun Dec 22 01:32:29 2013 -0500
@@ -0,0 +1,575 @@
+# rgToolFactory.py
+# see https://bitbucket.org/fubar/galaxytoolfactory/wiki/Home
+#
+# copyright ross lazarus (ross stop lazarus at gmail stop com) May 2012
+#
+# all rights reserved
+# Licensed under the LGPL
+# suggestions for improvement and bug fixes welcome at https://bitbucket.org/fubar/galaxytoolfactory/wiki/Home
+#
+# January 2013
+# problem pointed out by Carlos Borroto
+# added escaping for <>$ - thought I did that ages ago...
+#
+# August 11 2012
+# changed to use shell=False and cl as a sequence
+
+# This is a Galaxy tool factory for simple scripts in python, R or whatever ails ye.
+# It also serves as the wrapper for the new tool.
+#
+# you paste and run your script
+# Only works for simple scripts that read one input from the history.
+# Optionally can write one new history dataset,
+# and optionally collect any number of outputs into links on an autogenerated HTML page.
+
+# DO NOT install on a public or important site - please.
+
+# installed generated tools are fine if the script is safe.
+# They just run normally and their user cannot do anything unusually insecure
+# but please, practice safe toolshed.
+# Read the fucking code before you install any tool
+# especially this one
+
+# After you get the script working on some test data, you can
+# optionally generate a toolshed compatible gzip file
+# containing your script safely wrapped as an ordinary Galaxy script in your local toolshed for
+# safe and largely automated installation in a production Galaxy.
+
+# If you opt for an HTML output, you get all the script outputs arranged
+# as a single Html history item - all output files are linked, thumbnails for all the pdfs.
+# Ugly but really inexpensive.
+#
+# Patches appreciated please.
+#
+#
+# long route to June 2012 product
+# Behold the awesome power of Galaxy and the toolshed with the tool factory to bind them
+# derived from an integrated script model
+# called rgBaseScriptWrapper.py
+# Note to the unwary:
+# This tool allows arbitrary scripting on your Galaxy as the Galaxy user
+# There is nothing stopping a malicious user doing whatever they choose
+# Extremely dangerous!!
+# Totally insecure. So, trusted users only
+#
+# preferred model is a developer using their throw away workstation instance - ie a private site.
+# no real risk. The universe_wsgi.ini admin_users string is checked - only admin users are permitted to run this tool.
+#
+
+import sys
+import shutil
+import subprocess
+import os
+import time
+import tempfile
+import optparse
+import tarfile
+import re
+import shutil
+import math
+
+progname = os.path.split(sys.argv[0])[1]
+myversion = 'V000.2 June 2012'
+verbose = False
+debug = False
+toolFactoryURL = 'https://bitbucket.org/fubar/galaxytoolfactory'
+
+def timenow():
+ """return current time as a string
+ """
+ return time.strftime('%d/%m/%Y %H:%M:%S', time.localtime(time.time()))
+
+cheetah_escape_table = {
+ "$": "\$"
+ }
+
+cheetah_unescape_table = {
+ "\$": "$"
+ }
+
+def html_escape(t):
+ """Unescape \$ first in case already done
+ cheetah barfs if any $ without \
+ xml parsing is controlled with
+ """
+ text = t
+ for k in cheetah_unescape_table.keys():
+ text = text.replace(k,cheetah_unescape_table[k])
+ for k in cheetah_escape_table.keys():
+ text = text.replace(k,cheetah_escape_table[k])
+ return text
+
+
+class ScriptRunner:
+ """class is a wrapper for an arbitrary script
+ """
+
+ def __init__(self,opts=None,treatbashSpecial=True):
+ """
+ cleanup inputs, setup some outputs
+
+ """
+ self.treatbashSpecial = treatbashSpecial
+ if opts.output_dir: # simplify for the tool tarball
+ os.chdir(opts.output_dir)
+ self.thumbformat = 'jpg'
+ self.opts = opts
+ self.toolname = re.sub('[^a-zA-Z0-9_]+', '', opts.tool_name) # a sanitizer now does this but..
+ self.toolid = self.toolname
+ self.myname = sys.argv[0] # get our name because we write ourselves out as a tool later
+ self.pyfile = self.myname # crude but efficient - the cruft won't hurt much
+ self.xmlfile = '%s.xml' % self.toolname
+ s = open(self.opts.script_path,'r').readlines()
+ s = [x.rstrip() for x in s] # remove pesky dos line endings if needed
+ self.script = '\n'.join(s)
+ fhandle,self.sfile = tempfile.mkstemp(prefix=self.toolname,suffix=".%s" % (opts.interpreter))
+ tscript = open(self.sfile,'w') # use self.sfile as script source for Popen
+ tscript.write(self.script)
+ tscript.close()
+ self.escapedS = [html_escape(x) for x in s] # for restructured text in help
+ self.escapedScript = '\n'.join(self.escapedS)
+ self.indentedScript = '\n'.join([' %s' % x for x in s]) # for restructured text in help
+ if opts.output_dir: # may not want these complexities
+ self.tlog = os.path.join(opts.output_dir,"%s_runner.log" % self.toolname)
+ art = '%s.%s' % (self.toolname,opts.interpreter)
+ artpath = os.path.join(self.opts.output_dir,art) # need full path
+ artifact = open(artpath,'w') # use self.sfile as script source for Popen
+ artifact.write(self.script)
+ artifact.close()
+ self.cl = []
+ self.html = []
+ a = self.cl.append
+ a(opts.interpreter)
+ if self.treatbashSpecial and opts.interpreter in ['bash','sh']:
+ a(self.sfile)
+ else:
+ a('-') # stdin
+ a(opts.input_tab)
+ a(opts.output_tab)
+ self.outFormats = 'tabular' # TODO make this an option at tool generation time
+ self.inputFormats = 'tabular' # TODO make this an option at tool generation time
+ self.test1Input = '%s_test1_input.xls' % self.toolname
+ self.test1Output = '%s_test1_output.xls' % self.toolname
+ self.test1HTML = '%s_test1_output.html' % self.toolname
+
+ def makeXML(self):
+ """
+ Create a Galaxy xml tool wrapper for the new script as a string to write out
+ fixme - use templating or something less fugly than this example of what we produce
+
+
+ a tabular file
+
+ reverse.py --script_path "$runMe" --interpreter "python"
+ --tool_name "reverse" --input_tab "$input1" --output_tab "$tab_file"
+
+
+
+
+
+
+
+**What it Does**
+
+Reverse the columns in a tabular file
+
+
+
+
+
+# reverse order of columns in a tabular file
+import sys
+inp = sys.argv[1]
+outp = sys.argv[2]
+i = open(inp,'r')
+o = open(outp,'w')
+for row in i:
+ rs = row.rstrip().split('\t')
+ rs.reverse()
+ o.write('\t'.join(rs))
+ o.write('\n')
+i.close()
+o.close()
+
+
+
+
+
+
+ """
+ newXML="""
+%(tooldesc)s
+%(command)s
+
+%(inputs)s
+
+
+%(outputs)s
+
+
+
+
+
+
+%(tooltests)s
+
+
+
+ """
+# needs a dict with toolname, toolid, interpreter, scriptname, command, inputs as a multi line string ready to write, outputs ditto, help ditto
+
+ newCommand="""
+ %(toolname)s.py --script_path "$runMe" --interpreter "%(interpreter)s"
+ --tool_name "%(toolname)s" %(command_inputs)s %(command_outputs)s
+ """ # may NOT be an input or htmlout
+ tooltestsTabOnly = """
+
+
+ %s ' % self.opts.tool_desc
+ else:
+ xdict['tooldesc'] = ''
+ xdict['command_outputs'] = ''
+ xdict['outputs'] = ''
+ if self.opts.input_tab <> 'None':
+ xdict['command_inputs'] = '--input_tab "$input1" ' # the space may matter a lot if we append something
+ xdict['inputs'] = '
+ """
+ galhtmlattr = """
"""
+ galhtmlpostfix = """
Galaxy Tool "%s" run at %s
%s %s %s %s \n')
+ for i,paths in enumerate(pdflist):
+ fname,thumb = paths
+ s= """ \n'
+ ntogo = 0
+ if i < (npdf - 1): # more to come
+ s += ''
+ ntogo = nacross
+ else:
+ ntogo -= 1
+ html.append(s)
+ if html[-1].strip().endswith(' '):
+ html.append('
'*ntogo)
+ html.append('\n')
+ if len(fhtml) > 0:
+ fhtml.insert(0,'Output File Name (click to view) Size
### Error - %s returned no files - please confirm that parameters are sane
' % self.opts.interpreter)
+ rlog = open(self.tlog,'r').readlines()
+ rlog = [x for x in rlog if x.strip() > '']
+ if len(rlog) > 1:
+ html.append('%s log
\n' % self.opts.interpreter)
+ html += rlog
+ html.append(' \n')
+ html.append(galhtmlattr % (self.toolname))
+ html.append(galhtmlpostfix)
+ htmlf = file(self.opts.output_html,'w')
+ htmlf.write('\n'.join(html))
+ htmlf.write('\n')
+ htmlf.close()
+ self.html = html
+
+
+ def run(self):
+ """
+ scripts must be small enough not to fill the pipe!
+ """
+ if self.treatbashSpecial and self.opts.interpreter in ['bash','sh']:
+ retval = self.runBash()
+ else:
+ if self.opts.output_dir:
+ sto = open(self.tlog,'w')
+ sto.write('## Toolfactory generated command line = %s\n' % ' '.join(self.cl))
+ sto.flush()
+ p = subprocess.Popen(self.cl,shell=False,stdout=sto,stderr=sto,stdin=subprocess.PIPE,cwd=self.opts.output_dir)
+ else:
+ p = subprocess.Popen(self.cl,shell=False,stdin=subprocess.PIPE)
+ p.stdin.write(self.script)
+ p.stdin.close()
+ retval = p.wait()
+ if self.opts.output_dir:
+ sto.close()
+ if self.opts.make_HTML:
+ self.makeHtml()
+ return retval
+
+ def runBash(self):
+ """
+ cannot use - for bash so use self.sfile
+ """
+ if self.opts.output_dir:
+ s = '## Toolfactory generated command line = %s\n' % ' '.join(self.cl)
+ sto = open(self.tlog,'w')
+ sto.write(s)
+ sto.flush()
+ p = subprocess.Popen(self.cl,shell=False,stdout=sto,stderr=sto,cwd=self.opts.output_dir)
+ else:
+ p = subprocess.Popen(self.cl,shell=False)
+ retval = p.wait()
+ if self.opts.output_dir:
+ sto.close()
+ if self.opts.make_HTML:
+ self.makeHtml()
+ return retval
+
+
+def main():
+ u = """
+ This is a Galaxy wrapper. It expects to be called by a special purpose tool.xml as:
+ rgBaseScriptWrapper.py --script_path "$scriptPath" --tool_name "foo" --interpreter "Rscript"
+
+ """
+ op = optparse.OptionParser()
+ a = op.add_option
+ a('--script_path',default=None)
+ a('--tool_name',default=None)
+ a('--interpreter',default=None)
+ a('--output_dir',default=None)
+ a('--output_html',default=None)
+ a('--input_tab',default="None")
+ a('--output_tab',default="None")
+ a('--user_email',default='Unknown')
+ a('--bad_user',default=None)
+ a('--make_Tool',default=None)
+ a('--make_HTML',default=None)
+ a('--help_text',default=None)
+ a('--tool_desc',default=None)
+ a('--new_tool',default=None)
+ a('--tool_version',default=None)
+ opts, args = op.parse_args()
+ assert not opts.bad_user,'UNAUTHORISED: %s is NOT authorized to use this tool until Galaxy admin adds %s to admin_users in universe_wsgi.ini' % (opts.bad_user,opts.bad_user)
+ assert opts.tool_name,'## Tool Factory expects a tool name - eg --tool_name=DESeq'
+ assert opts.interpreter,'## Tool Factory wrapper expects an interpreter - eg --interpreter=Rscript'
+ assert os.path.isfile(opts.script_path),'## Tool Factory wrapper expects a script path - eg --script_path=foo.R'
+ if opts.output_dir:
+ try:
+ os.makedirs(opts.output_dir)
+ except:
+ pass
+ r = ScriptRunner(opts)
+ if opts.make_Tool:
+ retcode = r.makeTooltar()
+ else:
+ retcode = r.run()
+ os.unlink(r.sfile)
+ if retcode:
+ sys.exit(retcode) # indicate failure to job runner
+
+
+if __name__ == "__main__":
+ main()
+
+
diff -r 5b6af671d985 -r 8051d14cf819 rgedgeRpaired_nocamera.xml
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/rgedgeRpaired_nocamera.xml Sun Dec 22 01:32:29 2013 -0500
@@ -0,0 +1,1085 @@
+
+ models using BioConductor packages
+
+ r3
+ graphicsmagick
+ ghostscript
+ biocbasics
+
+
+
+ rgToolFactory.py --script_path "$runme" --interpreter "Rscript" --tool_name "DifferentialCounts"
+ --output_dir "$html_file.files_path" --output_html "$html_file" --make_HTML "yes"
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ Do not run edgeR
+ Run edgeR
+
+
+
+
+
+ Do not run DESeq2
+ Run DESeq2
+
+
+ Parametric (default) fit for dispersions
+ Local fit - this will automagically be used if parametric fit fails
+ Mean dispersion fit- use this if you really understand what you're doing - read the fine manual linked below in the documentation
+
+
+
+
+ Do not run VOOM
+ Run VOOM
+
+
+ fdr
+ Benjamini Hochberg
+ Benjamini Yukateli
+ Bonferroni
+ Hochberg
+ Holm
+ Hommel
+ no control for multiple tests
+
+
+
+
+ edgeR['doedgeR'] == "T"
+
+
+ DESeq2['doDESeq2'] == "T"
+
+
+ doVoom == "T"
+
+
+
+
+
+
+
+
+
+
+
+ nsamp) {
+ dm =dm[1:nsamp,]
+ #sub = paste('Showing',nsamp,'contigs ranked for evidence for differential abundance out of',nprobes,'total')
+ }
+ newcolnames = substr(colnames(dm),1,20)
+ colnames(dm) = newcolnames
+ pdf(outpdfname)
+ heatmap.2(dm,main=myTitle,ColSideColors=pcols,col=topo.colors(100),dendrogram="col",key=T,density.info='none',
+ Rowv=F,scale='row',trace='none',margins=c(8,8),cexRow=0.4,cexCol=0.5)
+ dev.off()
+}
+
+hmap = function(cmat,nmeans=4,outpdfname="heatMap.pdf",nsamp=250,TName='Treatment',group=NA,myTitle="Title goes here")
+{
+ # for 2 groups only was
+ #col.map = function(g) {if (g==TName) "#FF0000" else "#0000FF"}
+ #pcols = unlist(lapply(group,col.map))
+ gu = unique(group)
+ colours = rainbow(length(gu),start=0.3,end=0.6)
+ pcols = colours[match(group,gu)]
+ nrows = nrow(cmat)
+ mtitle = paste(myTitle,'Heatmap: n contigs =',nrows)
+ if (nrows > nsamp) {
+ cmat = cmat[c(1:nsamp),]
+ mtitle = paste('Heatmap: Top ',nsamp,' DE contigs (of ',nrows,')',sep='')
+ }
+ newcolnames = substr(colnames(cmat),1,20)
+ colnames(cmat) = newcolnames
+ pdf(outpdfname)
+ heatmap(cmat,scale='row',main=mtitle,cexRow=0.3,cexCol=0.4,Rowv=NA,ColSideColors=pcols)
+ dev.off()
+}
+
+qqPlot = function(descr='qqplot',pvector, outpdf='qqplot.pdf',...)
+# stolen from https://gist.github.com/703512
+{
+ o = -log10(sort(pvector,decreasing=F))
+ e = -log10( 1:length(o)/length(o) )
+ o[o==-Inf] = reallysmall
+ o[o==Inf] = reallybig
+ maint = descr
+ pdf(outpdf)
+ plot(e,o,pch=19,cex=1, main=maint, ...,
+ xlab=expression(Expected~~-log[10](italic(p))),
+ ylab=expression(Observed~~-log[10](italic(p))),
+ xlim=c(0,max(e)), ylim=c(0,max(o)))
+ lines(e,e,col="red")
+ grid(col = "lightgray", lty = "dotted")
+ dev.off()
+}
+
+smearPlot = function(DGEList,deTags, outSmear, outMain)
+ {
+ pdf(outSmear)
+ plotSmear(DGEList,de.tags=deTags,main=outMain)
+ grid(col="lightgray", lty="dotted")
+ dev.off()
+ }
+
+boxPlot = function(rawrs,cleanrs,maint,myTitle,pdfname)
+{ #
+ nc = ncol(rawrs)
+ for (i in c(1:nc)) {rawrs[(rawrs[,i] < 0),i] = NA}
+ fullnames = colnames(rawrs)
+ newcolnames = substr(colnames(rawrs),1,20)
+ colnames(rawrs) = newcolnames
+ newcolnames = substr(colnames(cleanrs),1,20)
+ colnames(cleanrs) = newcolnames
+ defpar = par(no.readonly=T)
+ print.noquote('raw contig counts by sample:')
+ print.noquote(summary(rawrs))
+ print.noquote('normalised contig counts by sample:')
+ print.noquote(summary(cleanrs))
+ pdf(pdfname)
+ par(mfrow=c(1,2))
+ boxplot(rawrs,varwidth=T,notch=T,ylab='log contig count',col="maroon",las=3,cex.axis=0.35,main=paste('Raw:',maint))
+ grid(col="lightgray",lty="dotted")
+ boxplot(cleanrs,varwidth=T,notch=T,ylab='log contig count',col="maroon",las=3,cex.axis=0.35,main=paste('After ',maint))
+ grid(col="lightgray",lty="dotted")
+ dev.off()
+ pdfname = "sample_counts_histogram.pdf"
+ nc = ncol(rawrs)
+ print.noquote(paste('Using ncol rawrs=',nc))
+ ncroot = round(sqrt(nc))
+ if (ncroot*ncroot < nc) { ncroot = ncroot + 1 }
+ m = c()
+ for (i in c(1:nc)) {
+ rhist = hist(rawrs[,i],breaks=100,plot=F)
+ m = append(m,max(rhist\$counts))
+ }
+ ymax = max(m)
+ ncols = length(fullnames)
+ if (ncols > 20)
+ {
+ scale = 7*ncols/20
+ pdf(pdfname,width=scale,height=scale)
+ } else {
+ pdf(pdfname)
+ }
+ par(mfrow=c(ncroot,ncroot))
+ for (i in c(1:nc)) {
+ hist(rawrs[,i], main=paste("Contig logcount",i), xlab='log raw count', col="maroon",
+ breaks=100,sub=fullnames[i],cex=0.8,ylim=c(0,ymax))
+ }
+ dev.off()
+ par(defpar)
+
+}
+
+cumPlot = function(rawrs,cleanrs,maint,myTitle)
+{ # updated to use ecdf
+ pdfname = "Filtering_rowsum_bar_charts.pdf"
+ defpar = par(no.readonly=T)
+ lrs = log(rawrs,10)
+ lim = max(lrs)
+ pdf(pdfname)
+ par(mfrow=c(2,1))
+ hist(lrs,breaks=100,main=paste('Before:',maint),xlab="# Reads (log)",
+ ylab="Count",col="maroon",sub=myTitle, xlim=c(0,lim),las=1)
+ grid(col="lightgray", lty="dotted")
+ lrs = log(cleanrs,10)
+ hist(lrs,breaks=100,main=paste('After:',maint),xlab="# Reads (log)",
+ ylab="Count",col="maroon",sub=myTitle,xlim=c(0,lim),las=1)
+ grid(col="lightgray", lty="dotted")
+ dev.off()
+ par(defpar)
+}
+
+cumPlot1 = function(rawrs,cleanrs,maint,myTitle)
+{ # updated to use ecdf
+ pdfname = paste(gsub(" ","", myTitle , fixed=TRUE),"RowsumCum.pdf",sep='_')
+ pdf(pdfname)
+ par(mfrow=c(2,1))
+ lastx = max(rawrs)
+ rawe = knots(ecdf(rawrs))
+ cleane = knots(ecdf(cleanrs))
+ cy = 1:length(cleane)/length(cleane)
+ ry = 1:length(rawe)/length(rawe)
+ plot(rawe,ry,type='l',main=paste('Before',maint),xlab="Log Contig Total Reads",
+ ylab="Cumulative proportion",col="maroon",log='x',xlim=c(1,lastx),sub=myTitle)
+ grid(col="blue")
+ plot(cleane,cy,type='l',main=paste('After',maint),xlab="Log Contig Total Reads",
+ ylab="Cumulative proportion",col="maroon",log='x',xlim=c(1,lastx),sub=myTitle)
+ grid(col="blue")
+ dev.off()
+}
+
+
+
+doGSEA = function(y=NULL,design=NULL,histgmt="",
+ bigmt="/data/genomes/gsea/3.1/Abetterchoice_nocgp_c2_c3_c5_symbols_all.gmt",
+ ntest=0, myTitle="myTitle", outfname="GSEA.xls", minnin=5, maxnin=2000,fdrthresh=0.05,fdrtype="BH")
+{
+ sink('Camera.log')
+ genesets = c()
+ if (bigmt > "")
+ {
+ bigenesets = readLines(bigmt)
+ genesets = bigenesets
+ }
+ if (histgmt > "")
+ {
+ hgenesets = readLines(histgmt)
+ if (bigmt > "") {
+ genesets = rbind(genesets,hgenesets)
+ } else {
+ genesets = hgenesets
+ } # use only history if no bi
+ }
+ print.noquote(paste("@@@read",length(genesets), 'genesets from',histgmt,bigmt))
+ genesets = strsplit(genesets,'\t') # tabular. genesetid\tURLorwhatever\tgene_1\t..\tgene_n
+ outf = outfname
+ head=paste(myTitle,'edgeR GSEA')
+ write(head,file=outfname,append=F)
+ ntest=length(genesets)
+ urownames = toupper(rownames(y))
+ upcam = c()
+ downcam = c()
+ for (i in 1:ntest) {
+ gs = unlist(genesets[i])
+ g = gs[1] # geneset_id
+ u = gs[2]
+ if (u > "") { u = paste("",u," ",sep="") }
+ glist = gs[3:length(gs)] # member gene symbols
+ glist = toupper(glist)
+ inglist = urownames %in% glist
+ nin = sum(inglist)
+ if ((nin > minnin) && (nin < maxnin)) {
+ ### print(paste('@@found',sum(inglist),'genes in glist'))
+ camres = camera(y=y,index=inglist,design=design)
+ if (! is.null(camres)) {
+ rownames(camres) = g # gene set name
+ camres = cbind(GeneSet=g,URL=u,camres)
+ if (camres\$Direction == "Up")
+ {
+ upcam = rbind(upcam,camres) } else {
+ downcam = rbind(downcam,camres)
+ }
+ }
+ }
+ }
+ uscam = upcam[order(upcam\$PValue),]
+ unadjp = uscam\$PValue
+ uscam\$adjPValue = p.adjust(unadjp,method=fdrtype)
+ nup = max(10,sum((uscam\$adjPValue < fdrthresh)))
+ dscam = downcam[order(downcam\$PValue),]
+ unadjp = dscam\$PValue
+ dscam\$adjPValue = p.adjust(unadjp,method=fdrtype)
+ ndown = max(10,sum((dscam\$adjPValue < fdrthresh)))
+ write.table(uscam,file=paste('camera_up',outfname,sep='_'),quote=F,sep='\t',row.names=F)
+ write.table(dscam,file=paste('camera_down',outfname,sep='_'),quote=F,sep='\t',row.names=F)
+ print.noquote(paste('@@@@@ Camera up top',nup,'gene sets:'))
+ write.table(head(uscam,nup),file="",quote=F,sep='\t',row.names=F)
+ print.noquote(paste('@@@@@ Camera down top',ndown,'gene sets:'))
+ write.table(head(dscam,ndown),file="",quote=F,sep='\t',row.names=F)
+ sink()
+}
+
+
+
+
+doGSEAatonce = function(y=NULL,design=NULL,histgmt="",
+ bigmt="/data/genomes/gsea/3.1/Abetterchoice_nocgp_c2_c3_c5_symbols_all.gmt",
+ ntest=0, myTitle="myTitle", outfname="GSEA.xls", minnin=5, maxnin=2000,fdrthresh=0.05,fdrtype="BH")
+{
+ sink('Camera.log')
+ genesets = c()
+ if (bigmt > "")
+ {
+ bigenesets = readLines(bigmt)
+ genesets = bigenesets
+ }
+ if (histgmt > "")
+ {
+ hgenesets = readLines(histgmt)
+ if (bigmt > "") {
+ genesets = rbind(genesets,hgenesets)
+ } else {
+ genesets = hgenesets
+ } # use only history if no bi
+ }
+ print.noquote(paste("@@@read",length(genesets), 'genesets from',histgmt,bigmt))
+ genesets = strsplit(genesets,'\t') # tabular. genesetid\tURLorwhatever\tgene_1\t..\tgene_n
+ outf = outfname
+ head=paste(myTitle,'edgeR GSEA')
+ write(head,file=outfname,append=F)
+ ntest=length(genesets)
+ urownames = toupper(rownames(y))
+ upcam = c()
+ downcam = c()
+ incam = c()
+ urls = c()
+ gsids = c()
+ for (i in 1:ntest) {
+ gs = unlist(genesets[i])
+ gsid = gs[1] # geneset_id
+ url = gs[2]
+ if (url > "") { url = paste("",url," ",sep="") }
+ glist = gs[3:length(gs)] # member gene symbols
+ glist = toupper(glist)
+ inglist = urownames %in% glist
+ nin = sum(inglist)
+ if ((nin > minnin) && (nin < maxnin)) {
+ incam = c(incam,inglist)
+ gsids = c(gsids,gsid)
+ urls = c(urls,url)
+ }
+ }
+ incam = as.list(incam)
+ names(incam) = gsids
+ allcam = camera(y=y,index=incam,design=design)
+ allcamres = cbind(geneset=gsids,allcam,URL=urls)
+ for (i in 1:ntest) {
+ camres = allcamres[i]
+ res = try(test = (camres\$Direction == "Up"))
+ if ("try-error" %in% class(res)) {
+ cat("test failed, camres = :")
+ print.noquote(camres)
+ } else { if (camres\$Direction == "Up")
+ { upcam = rbind(upcam,camres)
+ } else { downcam = rbind(downcam,camres)
+ }
+
+ }
+ }
+ uscam = upcam[order(upcam\$PValue),]
+ unadjp = uscam\$PValue
+ uscam\$adjPValue = p.adjust(unadjp,method=fdrtype)
+ nup = max(10,sum((uscam\$adjPValue < fdrthresh)))
+ dscam = downcam[order(downcam\$PValue),]
+ unadjp = dscam\$PValue
+ dscam\$adjPValue = p.adjust(unadjp,method=fdrtype)
+ ndown = max(10,sum((dscam\$adjPValue < fdrthresh)))
+ write.table(uscam,file=paste('camera_up',outfname,sep='_'),quote=F,sep='\t',row.names=F)
+ write.table(dscam,file=paste('camera_down',outfname,sep='_'),quote=F,sep='\t',row.names=F)
+ print.noquote(paste('@@@@@ Camera up top',nup,'gene sets:'))
+ write.table(head(uscam,nup),file="",quote=F,sep='\t',row.names=F)
+ print.noquote(paste('@@@@@ Camera down top',ndown,'gene sets:'))
+ write.table(head(dscam,ndown),file="",quote=F,sep='\t',row.names=F)
+ sink()
+ }
+
+
+edgeIt = function (Count_Matrix=c(),group=c(),out_edgeR=F,out_VOOM=F,out_DESeq2=F,fdrtype='fdr',priordf=5,
+ fdrthresh=0.05,outputdir='.', myTitle='Differential Counts',libSize=c(),useNDF=F,
+ filterquantile=0.2, subjects=c(),mydesign=NULL,
+ doDESeq2=T,doVoom=T,doCamera=T,doedgeR=T,org='hg19',
+ histgmt="", bigmt="/data/genomes/gsea/3.1/Abetterchoice_nocgp_c2_c3_c5_symbols_all.gmt",
+ doCook=F,DESeq_fitType="parameteric")
+{
+ # Error handling
+ if (length(unique(group))!=2){
+ print("Number of conditions identified in experiment does not equal 2")
+ q()
+ }
+ require(edgeR)
+ options(width = 512)
+ mt = paste(unlist(strsplit(myTitle,'_')),collapse=" ")
+ allN = nrow(Count_Matrix)
+ nscut = round(ncol(Count_Matrix)/2)
+ colTotmillionreads = colSums(Count_Matrix)/1e6
+ counts.dataframe = as.data.frame(c())
+ rawrs = rowSums(Count_Matrix)
+ nonzerod = Count_Matrix[(rawrs > 0),] # remove all zero count genes
+ nzN = nrow(nonzerod)
+ nzrs = rowSums(nonzerod)
+ zN = allN - nzN
+ print('# Quantiles for non-zero row counts:',quote=F)
+ print(quantile(nzrs,probs=seq(0,1,0.1)),quote=F)
+ if (useNDF == T)
+ {
+ gt1rpin3 = rowSums(Count_Matrix/expandAsMatrix(colTotmillionreads,dim(Count_Matrix)) >= 1) >= nscut
+ lo = colSums(Count_Matrix[!gt1rpin3,])
+ workCM = Count_Matrix[gt1rpin3,]
+ cleanrs = rowSums(workCM)
+ cleanN = length(cleanrs)
+ meth = paste( "After removing",length(lo),"contigs with fewer than ",nscut," sample read counts >= 1 per million, there are",sep="")
+ print(paste("Read",allN,"contigs. Removed",zN,"contigs with no reads.",meth,cleanN,"contigs"),quote=F)
+ maint = paste('Filter >=1/million reads in >=',nscut,'samples')
+ } else {
+ useme = (nzrs > quantile(nzrs,filterquantile))
+ workCM = nonzerod[useme,]
+ lo = colSums(nonzerod[!useme,])
+ cleanrs = rowSums(workCM)
+ cleanN = length(cleanrs)
+ meth = paste("After filtering at count quantile =",filterquantile,", there are",sep="")
+ print(paste('Read',allN,"contigs. Removed",zN,"with no reads.",meth,cleanN,"contigs"),quote=F)
+ maint = paste('Filter below',filterquantile,'quantile')
+ }
+ cumPlot(rawrs=rawrs,cleanrs=cleanrs,maint=maint,myTitle=myTitle)
+ allgenes = rownames(workCM)
+ reg = "^chr([0-9]+):([0-9]+)-([0-9]+)"
+ genecards=" 0.8) # is ucsc style string
+ {
+ print("@@ using ucsc substitution for urls")
+ contigurls = paste0(ucsc,"&position=chr",testreg[,2],":",testreg[,3],"-",testreg[,4],"\'>",allgenes," ")
+ } else {
+ print.noquote("@@ using genecards substitution for urls")
+ contigurls = paste0(genecards,allgenes,"\'>",allgenes,"")
+ }
+ print(paste("# Total low count contigs per sample = ",paste(lo,collapse=',')),quote=F)
+ cmrowsums = rowSums(workCM)
+ TName=unique(group)[1]
+ CName=unique(group)[2]
+ if (is.null(mydesign)) {
+ if (length(subjects) == 0)
+ {
+ mydesign = model.matrix(~group)
+ }
+ else {
+ subjf = factor(subjects)
+ mydesign = model.matrix(~subjf+group) # we block on subject so make group last to simplify finding it
+ }
+ }
+ print.noquote(paste('Using samples:',paste(colnames(workCM),collapse=',')))
+ print.noquote('Using design matrix:')
+ print.noquote(mydesign)
+ if (doedgeR) {
+ sink('edgeR.log')
+ #### Setup DGEList object
+ DGEList = DGEList(counts=workCM, group = group)
+ DGEList = calcNormFactors(DGEList)
+
+ DGEList = estimateGLMCommonDisp(DGEList,mydesign)
+ comdisp = DGEList\$common.dispersion
+ DGEList = estimateGLMTrendedDisp(DGEList,mydesign)
+ if (edgeR_priordf > 0) {
+ print.noquote(paste("prior.df =",edgeR_priordf))
+ DGEList = estimateGLMTagwiseDisp(DGEList,mydesign,prior.df = edgeR_priordf)
+ } else {
+ DGEList = estimateGLMTagwiseDisp(DGEList,mydesign)
+ }
+ DGLM = glmFit(DGEList,design=mydesign)
+ DE = glmLRT(DGLM,coef=ncol(DGLM\$design)) # always last one - subject is first if needed
+ efflib = DGEList\$samples\$lib.size*DGEList\$samples\$norm.factors
+ normData = (1e+06*DGEList\$counts/efflib)
+ uoutput = cbind(
+ Name=as.character(rownames(DGEList\$counts)),
+ DE\$table,
+ adj.p.value=p.adjust(DE\$table\$PValue, method=fdrtype),
+ Dispersion=DGEList\$tagwise.dispersion,totreads=cmrowsums,normData,
+ DGEList\$counts
+ )
+ soutput = uoutput[order(DE\$table\$PValue),] # sorted into p value order - for quick toptable
+ goodness = gof(DGLM, pcutoff=fdrthresh)
+ if (sum(goodness\$outlier) > 0) {
+ print.noquote('GLM outliers:')
+ print(paste(rownames(DGLM)[(goodness\$outlier)],collapse=','),quote=F)
+ } else {
+ print('No GLM fit outlier genes found\n')
+ }
+ z = limma::zscoreGamma(goodness\$gof.statistic, shape=goodness\$df/2, scale=2)
+ pdf("edgeR_GoodnessofFit.pdf")
+ qq = qqnorm(z, panel.first=grid(), main="tagwise dispersion")
+ abline(0,1,lwd=3)
+ points(qq\$x[goodness\$outlier],qq\$y[goodness\$outlier], pch=16, col="maroon")
+ dev.off()
+ estpriorn = getPriorN(DGEList)
+ print(paste("Common Dispersion =",comdisp,"CV = ",sqrt(comdisp),"getPriorN = ",estpriorn),quote=F)
+ efflib = DGEList\$samples\$lib.size*DGEList\$samples\$norm.factors
+ normData = (1e+06*DGEList\$counts/efflib)
+ uniqueg = unique(group)
+ #### Plot MDS
+ sample_colors = match(group,levels(group))
+ sampleTypes = levels(factor(group))
+ print.noquote(sampleTypes)
+ pdf("edgeR_MDSplot.pdf")
+ plotMDS.DGEList(DGEList,main=paste("edgeR MDS for",myTitle),cex=0.5,col=sample_colors,pch=sample_colors)
+ legend(x="topleft", legend = sampleTypes,col=c(1:length(sampleTypes)), pch=19)
+ grid(col="blue")
+ dev.off()
+ colnames(normData) = paste( colnames(normData),'N',sep="_")
+ print(paste('Raw sample read totals',paste(colSums(nonzerod,na.rm=T),collapse=',')))
+ nzd = data.frame(log(nonzerod + 1e-2,10))
+ try( boxPlot(rawrs=nzd,cleanrs=log(normData,10),maint='TMM Normalisation',myTitle=myTitle,pdfname="edgeR_raw_norm_counts_box.pdf") )
+ write.table(soutput,file=out_edgeR, quote=FALSE, sep="\t",row.names=F)
+ tt = cbind(
+ Name=as.character(rownames(DGEList\$counts)),
+ DE\$table,
+ adj.p.value=p.adjust(DE\$table\$PValue, method=fdrtype),
+ Dispersion=DGEList\$tagwise.dispersion,totreads=cmrowsums
+ )
+ print.noquote("# edgeR Top tags\n")
+ tt = cbind(tt,URL=contigurls) # add to end so table isn't laid out strangely
+ tt = tt[order(DE\$table\$PValue),]
+ print.noquote(tt[1:50,])
+ deTags = rownames(uoutput[uoutput\$adj.p.value < fdrthresh,])
+ nsig = length(deTags)
+ print(paste('#',nsig,'tags significant at adj p=',fdrthresh),quote=F)
+ deColours = ifelse(deTags,'red','black')
+ pdf("edgeR_BCV_vs_abundance.pdf")
+ plotBCV(DGEList, cex=0.3, main="Biological CV vs abundance")
+ dev.off()
+ dg = DGEList[order(DE\$table\$PValue),]
+ #normData = (1e+06 * dg\$counts/expandAsMatrix(dg\$samples\$lib.size, dim(dg)))
+ efflib = dg\$samples\$lib.size*dg\$samples\$norm.factors
+ normData = (1e+06*dg\$counts/efflib)
+ outpdfname="edgeR_top_100_heatmap.pdf"
+ hmap2(normData,nsamp=100,TName=TName,group=group,outpdfname=outpdfname,myTitle=paste('edgeR Heatmap',myTitle))
+ outSmear = "edgeR_smearplot.pdf"
+ outMain = paste("Smear Plot for ",TName,' Vs ',CName,' (FDR@',fdrthresh,' N = ',nsig,')',sep='')
+ smearPlot(DGEList=DGEList,deTags=deTags, outSmear=outSmear, outMain = outMain)
+ qqPlot(descr=paste(myTitle,'edgeR adj p QQ plot'),pvector=tt\$adj.p.value,outpdf='edgeR_qqplot.pdf')
+ norm.factor = DGEList\$samples\$norm.factors
+ topresults.edgeR = soutput[which(soutput\$adj.p.value < fdrthresh), ]
+ edgeRcountsindex = which(allgenes %in% rownames(topresults.edgeR))
+ edgeRcounts = rep(0, length(allgenes))
+ edgeRcounts[edgeRcountsindex] = 1 # Create venn diagram of hits
+ sink()
+ } ### doedgeR
+ if (doDESeq2 == T)
+ {
+ sink("DESeq2.log")
+ # DESeq2
+ require('DESeq2')
+ library('RColorBrewer')
+ if (length(subjects) == 0)
+ {
+ pdata = data.frame(Name=colnames(workCM),Rx=group,row.names=colnames(workCM))
+ deSEQds = DESeqDataSetFromMatrix(countData = workCM, colData = pdata, design = formula(~ Rx))
+ } else {
+ pdata = data.frame(Name=colnames(workCM),Rx=group,subjects=subjects,row.names=colnames(workCM))
+ deSEQds = DESeqDataSetFromMatrix(countData = workCM, colData = pdata, design = formula(~ subjects + Rx))
+ }
+ #DESeq2 = DESeq(deSEQds,fitType='local',pAdjustMethod=fdrtype)
+ #rDESeq = results(DESeq2)
+ #newCountDataSet(workCM, group)
+ deSeqDatsizefac = estimateSizeFactors(deSEQds)
+ deSeqDatdisp = estimateDispersions(deSeqDatsizefac,fitType=DESeq_fitType)
+ resDESeq = nbinomWaldTest(deSeqDatdisp, pAdjustMethod=fdrtype)
+ rDESeq = as.data.frame(results(resDESeq))
+ rDESeq = cbind(Contig=rownames(workCM),rDESeq,NReads=cmrowsums)
+ srDESeq = rDESeq[order(rDESeq\$pvalue),]
+ write.table(srDESeq,file=out_DESeq2, quote=FALSE, sep="\t",row.names=F)
+ qqPlot(descr=paste(myTitle,'DESeq2 adj p qq plot'),pvector=rDESeq\$padj,outpdf='DESeq2_qqplot.pdf')
+ cat("# DESeq top 50\n")
+ rDESeq = cbind(Contig=rownames(workCM),rDESeq,NReads=cmrowsums,URL=contigurls)
+ srDESeq = rDESeq[order(rDESeq\$pvalue),]
+ print.noquote(srDESeq[1:50,])
+ topresults.DESeq = rDESeq[which(rDESeq\$padj < fdrthresh), ]
+ DESeqcountsindex = which(allgenes %in% rownames(topresults.DESeq))
+ DESeqcounts = rep(0, length(allgenes))
+ DESeqcounts[DESeqcountsindex] = 1
+ pdf("DESeq2_dispersion_estimates.pdf")
+ plotDispEsts(resDESeq)
+ dev.off()
+ ysmall = abs(min(rDESeq\$log2FoldChange))
+ ybig = abs(max(rDESeq\$log2FoldChange))
+ ylimit = min(4,ysmall,ybig)
+ pdf("DESeq2_MA_plot.pdf")
+ plotMA(resDESeq,main=paste(myTitle,"DESeq2 MA plot"),ylim=c(-ylimit,ylimit))
+ dev.off()
+ rlogres = rlogTransformation(resDESeq)
+ sampledists = dist( t( assay(rlogres) ) )
+ sdmat = as.matrix(sampledists)
+ pdf("DESeq2_sample_distance_plot.pdf")
+ heatmap.2(sdmat,trace="none",main=paste(myTitle,"DESeq2 sample distances"),
+ col = colorRampPalette( rev(brewer.pal(9, "RdBu")) )(255))
+ dev.off()
+ ###outpdfname="DESeq2_top50_heatmap.pdf"
+ ###hmap2(sresDESeq,nsamp=50,TName=TName,group=group,outpdfname=outpdfname,myTitle=paste('DESeq2 vst rlog Heatmap',myTitle))
+ sink()
+ result = try( (ppca = plotPCA( varianceStabilizingTransformation(deSeqDatdisp,blind=T), intgroup=c("Rx","Name")) ) )
+ if ("try-error" %in% class(result)) {
+ print.noquote('DESeq2 plotPCA failed.')
+ } else {
+ pdf("DESeq2_PCA_plot.pdf")
+ #### wtf - print? Seems needed to get this to work
+ print(ppca)
+ dev.off()
+ }
+ }
+
+ if (doVoom == T) {
+ sink('Voom.log')
+ if (doedgeR == F) {
+ #### Setup DGEList object
+ DGEList = DGEList(counts=workCM, group = group)
+ DGEList = calcNormFactors(DGEList)
+ DGEList = estimateGLMCommonDisp(DGEList,mydesign)
+ DGEList = estimateGLMTrendedDisp(DGEList,mydesign)
+ DGEList = estimateGLMTagwiseDisp(DGEList,mydesign)
+ DGEList = estimateGLMTagwiseDisp(DGEList,mydesign)
+ norm.factor = DGEList\$samples\$norm.factors
+ }
+ pdf("Voom_mean_variance_plot.pdf")
+ dat.voomed = voom(DGEList, mydesign, plot = TRUE, lib.size = colSums(workCM) * norm.factor)
+ dev.off()
+ # Use limma to fit data
+ fit = lmFit(dat.voomed, mydesign)
+ fit = eBayes(fit)
+ rvoom = topTable(fit, coef = length(colnames(mydesign)), adj = fdrtype, n = Inf, sort="none")
+ qqPlot(descr=paste(myTitle,'Voom-limma adj p QQ plot'),pvector=rvoom\$adj.P.Val,outpdf='Voom_qqplot.pdf')
+ rownames(rvoom) = rownames(workCM)
+ rvoom = cbind(rvoom,NReads=cmrowsums)
+ srvoom = rvoom[order(rvoom\$P.Value),]
+ write.table(srvoom,file=out_VOOM, quote=FALSE, sep="\t",row.names=F)
+ rvoom = cbind(rvoom,NReads=cmrowsums,URL=contigurls)
+ srvoom = rvoom[order(rvoom\$P.Value),]
+ cat("# Voom top 50\n")
+ print(srvoom[1:50,])
+ # Use an FDR cutoff to find interesting samples for edgeR, DESeq and voom/limma
+ topresults.voom = rvoom[which(rvoom\$adj.P.Val < fdrthresh), ]
+ voomcountsindex = which(allgenes %in% topresults.voom\$ID)
+ voomcounts = rep(0, length(allgenes))
+ voomcounts[voomcountsindex] = 1
+ sink()
+ }
+
+ if (doCamera) {
+ doGSEA(y=DGEList,design=mydesign,histgmt=histgmt,bigmt=bigmt,ntest=20,myTitle=myTitle,
+ outfname=paste(mt,"GSEA.xls",sep="_"),fdrthresh=fdrthresh,fdrtype=fdrtype)
+ }
+
+ if ((doDESeq2==T) || (doVoom==T) || (doedgeR==T)) {
+ if ((doVoom==T) && (doDESeq2==T) && (doedgeR==T)) {
+ vennmain = paste(mt,'Voom,edgeR and DESeq2 overlap at FDR=',fdrthresh)
+ counts.dataframe = data.frame(edgeR = edgeRcounts, DESeq2 = DESeqcounts,
+ VOOM_limma = voomcounts, row.names = allgenes)
+ } else if ((doDESeq2==T) && (doedgeR==T)) {
+ vennmain = paste(mt,'DESeq2 and edgeR overlap at FDR=',fdrthresh)
+ counts.dataframe = data.frame(edgeR = edgeRcounts, DESeq2 = DESeqcounts, row.names = allgenes)
+ } else if ((doVoom==T) && (doedgeR==T)) {
+ vennmain = paste(mt,'Voom and edgeR overlap at FDR=',fdrthresh)
+ counts.dataframe = data.frame(edgeR = edgeRcounts, VOOM_limma = voomcounts, row.names = allgenes)
+ }
+
+ if (nrow(counts.dataframe > 1)) {
+ counts.venn = vennCounts(counts.dataframe)
+ vennf = "Venn_significant_genes_overlap.pdf"
+ pdf(vennf)
+ vennDiagram(counts.venn,main=vennmain,col="maroon")
+ dev.off()
+ }
+ } #### doDESeq2 or doVoom
+
+}
+#### Done
+
+###sink(stdout(),append=T,type="message")
+builtin_gmt = ""
+history_gmt = ""
+history_gmt_name = ""
+out_edgeR = F
+out_DESeq2 = F
+out_VOOM = "$out_VOOM"
+doDESeq2 = $DESeq2.doDESeq2 # make these T or F
+doVoom = $doVoom
+doCamera = F
+doedgeR = $edgeR.doedgeR
+edgeR_priordf = 0
+
+
+#if $doVoom == "T":
+ out_VOOM = "$out_VOOM"
+#end if
+
+#if $DESeq2.doDESeq2 == "T":
+ out_DESeq2 = "$out_DESeq2"
+ DESeq_fitType = "$DESeq2.DESeq_fitType"
+#end if
+
+#if $edgeR.doedgeR == "T":
+ out_edgeR = "$out_edgeR"
+ edgeR_priordf = $edgeR.edgeR_priordf
+#end if
+
+
+if (sum(c(doedgeR,doVoom,doDESeq2)) == 0)
+{
+write("No methods chosen - nothing to do! Please try again after choosing one or more methods", stderr())
+quit(save="no",status=2)
+}
+
+Out_Dir = "$html_file.files_path"
+Input = "$input1"
+TreatmentName = "$treatment_name"
+TreatmentCols = "$Treat_cols"
+ControlName = "$control_name"
+ControlCols= "$Control_cols"
+org = "$input1.dbkey"
+if (org == "") { org = "hg19"}
+fdrtype = "$fdrtype"
+fdrthresh = $fdrthresh
+useNDF = $useNDF
+fQ = $fQ # non-differential centile cutoff
+myTitle = "$title"
+sids = strsplit("$subjectids",',')
+subjects = unlist(sids)
+nsubj = length(subjects)
+TCols = as.numeric(strsplit(TreatmentCols,",")[[1]])-1
+CCols = as.numeric(strsplit(ControlCols,",")[[1]])-1
+cat('Got TCols=')
+cat(TCols)
+cat('; CCols=')
+cat(CCols)
+cat('\n')
+useCols = c(TCols,CCols)
+if (file.exists(Out_Dir) == F) dir.create(Out_Dir)
+Count_Matrix = read.table(Input,header=T,row.names=1,sep='\t') #Load tab file assume header
+snames = colnames(Count_Matrix)
+nsamples = length(snames)
+if (nsubj > 0 & nsubj != nsamples) {
+options("show.error.messages"=T)
+mess = paste('Fatal error: Supplied subject id list',paste(subjects,collapse=','),
+ 'has length',nsubj,'but there are',nsamples,'samples',paste(snames,collapse=','))
+write(mess, stderr())
+quit(save="no",status=4)
+}
+if (length(subjects) != 0) {subjects = subjects[useCols]}
+Count_Matrix = Count_Matrix[,useCols] ### reorder columns
+rn = rownames(Count_Matrix)
+islib = rn %in% c('librarySize','NotInBedRegions')
+LibSizes = Count_Matrix[subset(rn,islib),][1] # take first
+Count_Matrix = Count_Matrix[subset(rn,! islib),]
+group = c(rep(TreatmentName,length(TCols)), rep(ControlName,length(CCols)) ) #Build a group descriptor
+group = factor(group, levels=c(ControlName,TreatmentName))
+colnames(Count_Matrix) = paste(group,colnames(Count_Matrix),sep="_") #Relable columns
+results = edgeIt(Count_Matrix=Count_Matrix,group=group, out_edgeR=out_edgeR, out_VOOM=out_VOOM, out_DESeq2=out_DESeq2,
+ fdrtype='BH',mydesign=NULL,priordf=edgeR_priordf,fdrthresh=fdrthresh,outputdir='.',
+ myTitle=myTitle,useNDF=F,libSize=c(),filterquantile=fQ,subjects=subjects,
+ doDESeq2=doDESeq2,doVoom=doVoom,doCamera=doCamera,doedgeR=doedgeR,org=org,
+ histgmt=history_gmt,bigmt=builtin_gmt,DESeq_fitType=DESeq_fitType)
+sessionInfo()
+]]>
+
+
+
+
+**What it does**
+
+Allows short read sequence counts from controlled experiments to be analysed for differentially expressed genes.
+Optionally adds a term for subject if not all samples are independent or if some other factor needs to be blocked in the design.
+
+**Input**
+
+Requires a count matrix as a tabular file. These are best made using the companion HTSeq_ based counter Galaxy wrapper
+and your fave gene model to generate inputs. Each row is a genomic feature (gene or exon eg) and each column the
+non-negative integer count of reads from one sample overlapping the feature.
+The matrix must have a header row uniquely identifying the source samples, and unique row names in
+the first column. Typically the row names are gene symbols or probe ids for downstream use in GSEA and other methods.
+
+**Specifying comparisons**
+
+This is basically dumbed down for two factors - case vs control.
+
+More complex interfaces are possible but painful at present.
+Probably need to specify a phenotype file to do this better.
+Work in progress. Send code.
+
+If you have (eg) paired samples and wish to include a term in the GLM to account for some other factor (subject in the case of paired samples),
+put a comma separated list of indicators for every sample (whether modelled or not!) indicating (eg) the subject number or
+A list of integers, one for each subject or an empty string if samples are all independent.
+If not empty, there must be exactly as many integers in the supplied integer list as there are columns (samples) in the count matrix.
+Integers for samples that are not in the analysis *must* be present in the string as filler even if not used.
+
+So if you have 2 pairs out of 6 samples, you need to put in unique integers for the unpaired ones
+eg if you had 6 samples with the first two independent but the second and third pairs each being from independent subjects. you might use
+8,9,1,1,2,2
+as subject IDs to indicate two paired samples from the same subject in columns 3/4 and 5/6
+
+**Methods available**
+
+You can run 3 popular Bioconductor packages available for count data.
+
+edgeR - see edgeR_ for details
+
+VOOM/limma - see limma_VOOM_ for details
+
+DESeq2 - see DESeq2_ for details
+
+and optionally camera in edgeR which works better if MSigDB is installed.
+
+**Outputs**
+
+Some helpful plots and analysis results. Note that most of these are produced using R code
+suggested by the excellent documentation and vignettes for the Bioconductor
+packages invoked. The Tool Factory is used to automatically lay these out for you to enjoy.
+
+**Note on Voom**
+
+The voom from limma version 3.16.6 help in R includes this from the authors - but you should read the paper to interpret this method.
+
+This function is intended to process RNA-Seq or ChIP-Seq data prior to linear modelling in limma.
+
+voom is an acronym for mean-variance modelling at the observational level.
+The key concern is to estimate the mean-variance relationship in the data, then use this to compute appropriate weights for each observation.
+Count data almost show non-trivial mean-variance relationships. Raw counts show increasing variance with increasing count size, while log-counts typically show a decreasing mean-variance trend.
+This function estimates the mean-variance trend for log-counts, then assigns a weight to each observation based on its predicted variance.
+The weights are then used in the linear modelling process to adjust for heteroscedasticity.
+
+In an experiment, a count value is observed for each tag in each sample. A tag-wise mean-variance trend is computed using lowess.
+The tag-wise mean is the mean log2 count with an offset of 0.5, across samples for a given tag.
+The tag-wise variance is the quarter-root-variance of normalized log2 counts per million values with an offset of 0.5, across samples for a given tag.
+Tags with zero counts across all samples are not included in the lowess fit. Optional normalization is performed using normalizeBetweenArrays.
+Using fitted values of log2 counts from a linear model fit by lmFit, variances from the mean-variance trend were interpolated for each observation.
+This was carried out by approxfun. Inverse variance weights can be used to correct for mean-variance trend in the count data.
+
+
+Author(s)
+
+Charity Law and Gordon Smyth
+
+References
+
+Law, CW (2013). Precision weights for gene expression analysis. PhD Thesis. University of Melbourne, Australia.
+
+Law, CW, Chen, Y, Shi, W, Smyth, GK (2013). Voom! Precision weights unlock linear model analysis tools for RNA-seq read counts.
+Technical Report 1 May 2013, Bioinformatics Division, Walter and Eliza Hall Institute of Medical Reseach, Melbourne, Australia.
+http://www.statsci.org/smyth/pubs/VoomPreprint.pdf
+
+See Also
+
+A voom case study is given in the edgeR User's Guide.
+
+vooma is a similar function but for microarrays instead of RNA-seq.
+
+
+***old rant on changes to Bioconductor package variable names between versions***
+
+The edgeR authors made a small cosmetic change in the name of one important variable (from p.value to PValue)
+breaking this and all other code that assumed the old name for this variable,
+between edgeR2.4.4 and 2.4.6 (the version for R 2.14 as at the time of writing).
+This means that all code using edgeR is sensitive to the version. I think this was a very unwise thing
+to do because it wasted hours of my time to track down and will similarly cost other edgeR users dearly
+when their old scripts break. This tool currently now works with 2.4.6.
+
+**Note on prior.N**
+
+http://seqanswers.com/forums/showthread.php?t=5591 says:
+
+*prior.n*
+
+The value for prior.n determines the amount of smoothing of tagwise dispersions towards the common dispersion.
+You can think of it as like a "weight" for the common value. (It is actually the weight for the common likelihood
+in the weighted likelihood equation). The larger the value for prior.n, the more smoothing, i.e. the closer your
+tagwise dispersion estimates will be to the common dispersion. If you use a prior.n of 1, then that gives the
+common likelihood the weight of one observation.
+
+In answer to your question, it is a good thing to squeeze the tagwise dispersions towards a common value,
+or else you will be using very unreliable estimates of the dispersion. I would not recommend using the value that
+you obtained from estimateSmoothing()---this is far too small and would result in virtually no moderation
+(squeezing) of the tagwise dispersions. How many samples do you have in your experiment?
+What is the experimental design? If you have few samples (less than 6) then I would suggest a prior.n of at least 10.
+If you have more samples, then the tagwise dispersion estimates will be more reliable,
+so you could consider using a smaller prior.n, although I would hesitate to use a prior.n less than 5.
+
+
+From Bioconductor Digest, Vol 118, Issue 5, Gordon writes:
+
+Dear Dorota,
+
+The important settings are prior.df and trend.
+
+prior.n and prior.df are related through prior.df = prior.n * residual.df,
+and your experiment has residual.df = 36 - 12 = 24. So the old setting of
+prior.n=10 is equivalent for your data to prior.df = 240, a very large
+value. Going the other way, the new setting of prior.df=10 is equivalent
+to prior.n=10/24.
+
+To recover old results with the current software you would use
+
+ estimateTagwiseDisp(object, prior.df=240, trend="none")
+
+To get the new default from old software you would use
+
+ estimateTagwiseDisp(object, prior.n=10/24, trend=TRUE)
+
+Actually the old trend method is equivalent to trend="loess" in the new
+software. You should use plotBCV(object) to see whether a trend is
+required.
+
+Note you could also use
+
+ prior.n = getPriorN(object, prior.df=10)
+
+to map between prior.df and prior.n.
+
+----
+
+**Attributions**
+
+edgeR - edgeR_
+
+VOOM/limma - limma_VOOM_
+
+DESeq2 - DESeq2_ for details
+
+See above for Bioconductor package documentation for packages exposed in Galaxy by this tool and app store package.
+
+Galaxy_ (that's what you are using right now!) for gluing everything together
+
+Otherwise, all code and documentation comprising this tool was written by Ross Lazarus and is
+licensed to you under the LGPL_ like other rgenetics artefacts
+
+.. _LGPL: http://www.gnu.org/copyleft/lesser.html
+.. _HTSeq: http://www-huber.embl.de/users/anders/HTSeq/doc/index.html
+.. _edgeR: http://www.bioconductor.org/packages/release/bioc/html/edgeR.html
+.. _DESeq2: http://www.bioconductor.org/packages/release/bioc/html/DESeq2.html
+.. _limma_VOOM: http://www.bioconductor.org/packages/release/bioc/html/limma.html
+.. _Galaxy: http://getgalaxy.org
+
+
+
+
+
diff -r 5b6af671d985 -r 8051d14cf819 rgedgeRpaired_nocamera.xml~
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/rgedgeRpaired_nocamera.xml~ Sun Dec 22 01:32:29 2013 -0500
@@ -0,0 +1,1081 @@
+
+ models using BioConductor packages
+
+ r3
+ graphicsmagick
+ ghostscript
+ biocbasics
+
+
+
+ rgToolFactory.py --script_path "$runme" --interpreter "Rscript" --tool_name "DifferentialCounts"
+ --output_dir "$html_file.files_path" --output_html "$html_file" --make_HTML "yes"
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ Do not run edgeR
+ Run edgeR
+
+
+
+
+
+ Do not run DESeq2
+ Run DESeq2
+
+
+ Parametric (default) fit for dispersions
+ Local fit - this will automagically be used if parametric fit fails
+ Mean dispersion fit- use this if you really understand what you're doing - read the fine manual linked below in the documentation
+
+
+
+
+ Do not run VOOM
+ Run VOOM
+
+
+ fdr
+ Benjamini Hochberg
+ Benjamini Yukateli
+ Bonferroni
+ Hochberg
+ Holm
+ Hommel
+ no control for multiple tests
+
+
+
+
+ edgeR['doedgeR'] == "T"
+
+
+ DESeq2['doDESeq2'] == "T"
+
+
+ doVoom == "T"
+
+
+
+
+
+
+
+
+
+
+
+ nsamp) {
+ dm =dm[1:nsamp,]
+ #sub = paste('Showing',nsamp,'contigs ranked for evidence for differential abundance out of',nprobes,'total')
+ }
+ newcolnames = substr(colnames(dm),1,20)
+ colnames(dm) = newcolnames
+ pdf(outpdfname)
+ heatmap.2(dm,main=myTitle,ColSideColors=pcols,col=topo.colors(100),dendrogram="col",key=T,density.info='none',
+ Rowv=F,scale='row',trace='none',margins=c(8,8),cexRow=0.4,cexCol=0.5)
+ dev.off()
+}
+
+hmap = function(cmat,nmeans=4,outpdfname="heatMap.pdf",nsamp=250,TName='Treatment',group=NA,myTitle="Title goes here")
+{
+ # for 2 groups only was
+ #col.map = function(g) {if (g==TName) "#FF0000" else "#0000FF"}
+ #pcols = unlist(lapply(group,col.map))
+ gu = unique(group)
+ colours = rainbow(length(gu),start=0.3,end=0.6)
+ pcols = colours[match(group,gu)]
+ nrows = nrow(cmat)
+ mtitle = paste(myTitle,'Heatmap: n contigs =',nrows)
+ if (nrows > nsamp) {
+ cmat = cmat[c(1:nsamp),]
+ mtitle = paste('Heatmap: Top ',nsamp,' DE contigs (of ',nrows,')',sep='')
+ }
+ newcolnames = substr(colnames(cmat),1,20)
+ colnames(cmat) = newcolnames
+ pdf(outpdfname)
+ heatmap(cmat,scale='row',main=mtitle,cexRow=0.3,cexCol=0.4,Rowv=NA,ColSideColors=pcols)
+ dev.off()
+}
+
+qqPlot = function(descr='qqplot',pvector, outpdf='qqplot.pdf',...)
+# stolen from https://gist.github.com/703512
+{
+ o = -log10(sort(pvector,decreasing=F))
+ e = -log10( 1:length(o)/length(o) )
+ o[o==-Inf] = reallysmall
+ o[o==Inf] = reallybig
+ maint = descr
+ pdf(outpdf)
+ plot(e,o,pch=19,cex=1, main=maint, ...,
+ xlab=expression(Expected~~-log[10](italic(p))),
+ ylab=expression(Observed~~-log[10](italic(p))),
+ xlim=c(0,max(e)), ylim=c(0,max(o)))
+ lines(e,e,col="red")
+ grid(col = "lightgray", lty = "dotted")
+ dev.off()
+}
+
+smearPlot = function(DGEList,deTags, outSmear, outMain)
+ {
+ pdf(outSmear)
+ plotSmear(DGEList,de.tags=deTags,main=outMain)
+ grid(col="lightgray", lty="dotted")
+ dev.off()
+ }
+
+boxPlot = function(rawrs,cleanrs,maint,myTitle,pdfname)
+{ #
+ nc = ncol(rawrs)
+ for (i in c(1:nc)) {rawrs[(rawrs[,i] < 0),i] = NA}
+ fullnames = colnames(rawrs)
+ newcolnames = substr(colnames(rawrs),1,20)
+ colnames(rawrs) = newcolnames
+ newcolnames = substr(colnames(cleanrs),1,20)
+ colnames(cleanrs) = newcolnames
+ defpar = par(no.readonly=T)
+ print.noquote('raw contig counts by sample:')
+ print.noquote(summary(rawrs))
+ print.noquote('normalised contig counts by sample:')
+ print.noquote(summary(cleanrs))
+ pdf(pdfname)
+ par(mfrow=c(1,2))
+ boxplot(rawrs,varwidth=T,notch=T,ylab='log contig count',col="maroon",las=3,cex.axis=0.35,main=paste('Raw:',maint))
+ grid(col="lightgray",lty="dotted")
+ boxplot(cleanrs,varwidth=T,notch=T,ylab='log contig count',col="maroon",las=3,cex.axis=0.35,main=paste('After ',maint))
+ grid(col="lightgray",lty="dotted")
+ dev.off()
+ pdfname = "sample_counts_histogram.pdf"
+ nc = ncol(rawrs)
+ print.noquote(paste('Using ncol rawrs=',nc))
+ ncroot = round(sqrt(nc))
+ if (ncroot*ncroot < nc) { ncroot = ncroot + 1 }
+ m = c()
+ for (i in c(1:nc)) {
+ rhist = hist(rawrs[,i],breaks=100,plot=F)
+ m = append(m,max(rhist\$counts))
+ }
+ ymax = max(m)
+ ncols = length(fullnames)
+ if (ncols > 20)
+ {
+ scale = 7*ncols/20
+ pdf(pdfname,width=scale,height=scale)
+ } else {
+ pdf(pdfname)
+ }
+ par(mfrow=c(ncroot,ncroot))
+ for (i in c(1:nc)) {
+ hist(rawrs[,i], main=paste("Contig logcount",i), xlab='log raw count', col="maroon",
+ breaks=100,sub=fullnames[i],cex=0.8,ylim=c(0,ymax))
+ }
+ dev.off()
+ par(defpar)
+
+}
+
+cumPlot = function(rawrs,cleanrs,maint,myTitle)
+{ # updated to use ecdf
+ pdfname = "Filtering_rowsum_bar_charts.pdf"
+ defpar = par(no.readonly=T)
+ lrs = log(rawrs,10)
+ lim = max(lrs)
+ pdf(pdfname)
+ par(mfrow=c(2,1))
+ hist(lrs,breaks=100,main=paste('Before:',maint),xlab="# Reads (log)",
+ ylab="Count",col="maroon",sub=myTitle, xlim=c(0,lim),las=1)
+ grid(col="lightgray", lty="dotted")
+ lrs = log(cleanrs,10)
+ hist(lrs,breaks=100,main=paste('After:',maint),xlab="# Reads (log)",
+ ylab="Count",col="maroon",sub=myTitle,xlim=c(0,lim),las=1)
+ grid(col="lightgray", lty="dotted")
+ dev.off()
+ par(defpar)
+}
+
+cumPlot1 = function(rawrs,cleanrs,maint,myTitle)
+{ # updated to use ecdf
+ pdfname = paste(gsub(" ","", myTitle , fixed=TRUE),"RowsumCum.pdf",sep='_')
+ pdf(pdfname)
+ par(mfrow=c(2,1))
+ lastx = max(rawrs)
+ rawe = knots(ecdf(rawrs))
+ cleane = knots(ecdf(cleanrs))
+ cy = 1:length(cleane)/length(cleane)
+ ry = 1:length(rawe)/length(rawe)
+ plot(rawe,ry,type='l',main=paste('Before',maint),xlab="Log Contig Total Reads",
+ ylab="Cumulative proportion",col="maroon",log='x',xlim=c(1,lastx),sub=myTitle)
+ grid(col="blue")
+ plot(cleane,cy,type='l',main=paste('After',maint),xlab="Log Contig Total Reads",
+ ylab="Cumulative proportion",col="maroon",log='x',xlim=c(1,lastx),sub=myTitle)
+ grid(col="blue")
+ dev.off()
+}
+
+
+
+doGSEA = function(y=NULL,design=NULL,histgmt="",
+ bigmt="/data/genomes/gsea/3.1/Abetterchoice_nocgp_c2_c3_c5_symbols_all.gmt",
+ ntest=0, myTitle="myTitle", outfname="GSEA.xls", minnin=5, maxnin=2000,fdrthresh=0.05,fdrtype="BH")
+{
+ sink('Camera.log')
+ genesets = c()
+ if (bigmt > "")
+ {
+ bigenesets = readLines(bigmt)
+ genesets = bigenesets
+ }
+ if (histgmt > "")
+ {
+ hgenesets = readLines(histgmt)
+ if (bigmt > "") {
+ genesets = rbind(genesets,hgenesets)
+ } else {
+ genesets = hgenesets
+ } # use only history if no bi
+ }
+ print.noquote(paste("@@@read",length(genesets), 'genesets from',histgmt,bigmt))
+ genesets = strsplit(genesets,'\t') # tabular. genesetid\tURLorwhatever\tgene_1\t..\tgene_n
+ outf = outfname
+ head=paste(myTitle,'edgeR GSEA')
+ write(head,file=outfname,append=F)
+ ntest=length(genesets)
+ urownames = toupper(rownames(y))
+ upcam = c()
+ downcam = c()
+ for (i in 1:ntest) {
+ gs = unlist(genesets[i])
+ g = gs[1] # geneset_id
+ u = gs[2]
+ if (u > "") { u = paste("",u," ",sep="") }
+ glist = gs[3:length(gs)] # member gene symbols
+ glist = toupper(glist)
+ inglist = urownames %in% glist
+ nin = sum(inglist)
+ if ((nin > minnin) && (nin < maxnin)) {
+ ### print(paste('@@found',sum(inglist),'genes in glist'))
+ camres = camera(y=y,index=inglist,design=design)
+ if (! is.null(camres)) {
+ rownames(camres) = g # gene set name
+ camres = cbind(GeneSet=g,URL=u,camres)
+ if (camres\$Direction == "Up")
+ {
+ upcam = rbind(upcam,camres) } else {
+ downcam = rbind(downcam,camres)
+ }
+ }
+ }
+ }
+ uscam = upcam[order(upcam\$PValue),]
+ unadjp = uscam\$PValue
+ uscam\$adjPValue = p.adjust(unadjp,method=fdrtype)
+ nup = max(10,sum((uscam\$adjPValue < fdrthresh)))
+ dscam = downcam[order(downcam\$PValue),]
+ unadjp = dscam\$PValue
+ dscam\$adjPValue = p.adjust(unadjp,method=fdrtype)
+ ndown = max(10,sum((dscam\$adjPValue < fdrthresh)))
+ write.table(uscam,file=paste('camera_up',outfname,sep='_'),quote=F,sep='\t',row.names=F)
+ write.table(dscam,file=paste('camera_down',outfname,sep='_'),quote=F,sep='\t',row.names=F)
+ print.noquote(paste('@@@@@ Camera up top',nup,'gene sets:'))
+ write.table(head(uscam,nup),file="",quote=F,sep='\t',row.names=F)
+ print.noquote(paste('@@@@@ Camera down top',ndown,'gene sets:'))
+ write.table(head(dscam,ndown),file="",quote=F,sep='\t',row.names=F)
+ sink()
+}
+
+
+
+
+doGSEAatonce = function(y=NULL,design=NULL,histgmt="",
+ bigmt="/data/genomes/gsea/3.1/Abetterchoice_nocgp_c2_c3_c5_symbols_all.gmt",
+ ntest=0, myTitle="myTitle", outfname="GSEA.xls", minnin=5, maxnin=2000,fdrthresh=0.05,fdrtype="BH")
+{
+ sink('Camera.log')
+ genesets = c()
+ if (bigmt > "")
+ {
+ bigenesets = readLines(bigmt)
+ genesets = bigenesets
+ }
+ if (histgmt > "")
+ {
+ hgenesets = readLines(histgmt)
+ if (bigmt > "") {
+ genesets = rbind(genesets,hgenesets)
+ } else {
+ genesets = hgenesets
+ } # use only history if no bi
+ }
+ print.noquote(paste("@@@read",length(genesets), 'genesets from',histgmt,bigmt))
+ genesets = strsplit(genesets,'\t') # tabular. genesetid\tURLorwhatever\tgene_1\t..\tgene_n
+ outf = outfname
+ head=paste(myTitle,'edgeR GSEA')
+ write(head,file=outfname,append=F)
+ ntest=length(genesets)
+ urownames = toupper(rownames(y))
+ upcam = c()
+ downcam = c()
+ incam = c()
+ urls = c()
+ gsids = c()
+ for (i in 1:ntest) {
+ gs = unlist(genesets[i])
+ gsid = gs[1] # geneset_id
+ url = gs[2]
+ if (url > "") { url = paste("",url," ",sep="") }
+ glist = gs[3:length(gs)] # member gene symbols
+ glist = toupper(glist)
+ inglist = urownames %in% glist
+ nin = sum(inglist)
+ if ((nin > minnin) && (nin < maxnin)) {
+ incam = c(incam,inglist)
+ gsids = c(gsids,gsid)
+ urls = c(urls,url)
+ }
+ }
+ incam = as.list(incam)
+ names(incam) = gsids
+ allcam = camera(y=y,index=incam,design=design)
+ allcamres = cbind(geneset=gsids,allcam,URL=urls)
+ for (i in 1:ntest) {
+ camres = allcamres[i]
+ res = try(test = (camres\$Direction == "Up"))
+ if ("try-error" %in% class(res)) {
+ cat("test failed, camres = :")
+ print.noquote(camres)
+ } else { if (camres\$Direction == "Up")
+ { upcam = rbind(upcam,camres)
+ } else { downcam = rbind(downcam,camres)
+ }
+
+ }
+ }
+ uscam = upcam[order(upcam\$PValue),]
+ unadjp = uscam\$PValue
+ uscam\$adjPValue = p.adjust(unadjp,method=fdrtype)
+ nup = max(10,sum((uscam\$adjPValue < fdrthresh)))
+ dscam = downcam[order(downcam\$PValue),]
+ unadjp = dscam\$PValue
+ dscam\$adjPValue = p.adjust(unadjp,method=fdrtype)
+ ndown = max(10,sum((dscam\$adjPValue < fdrthresh)))
+ write.table(uscam,file=paste('camera_up',outfname,sep='_'),quote=F,sep='\t',row.names=F)
+ write.table(dscam,file=paste('camera_down',outfname,sep='_'),quote=F,sep='\t',row.names=F)
+ print.noquote(paste('@@@@@ Camera up top',nup,'gene sets:'))
+ write.table(head(uscam,nup),file="",quote=F,sep='\t',row.names=F)
+ print.noquote(paste('@@@@@ Camera down top',ndown,'gene sets:'))
+ write.table(head(dscam,ndown),file="",quote=F,sep='\t',row.names=F)
+ sink()
+ }
+
+
+edgeIt = function (Count_Matrix=c(),group=c(),out_edgeR=F,out_VOOM=F,out_DESeq2=F,fdrtype='fdr',priordf=5,
+ fdrthresh=0.05,outputdir='.', myTitle='Differential Counts',libSize=c(),useNDF=F,
+ filterquantile=0.2, subjects=c(),mydesign=NULL,
+ doDESeq2=T,doVoom=T,doCamera=T,doedgeR=T,org='hg19',
+ histgmt="", bigmt="/data/genomes/gsea/3.1/Abetterchoice_nocgp_c2_c3_c5_symbols_all.gmt",
+ doCook=F,DESeq_fitType="parameteric")
+{
+ # Error handling
+ if (length(unique(group))!=2){
+ print("Number of conditions identified in experiment does not equal 2")
+ q()
+ }
+ require(edgeR)
+ options(width = 512)
+ mt = paste(unlist(strsplit(myTitle,'_')),collapse=" ")
+ allN = nrow(Count_Matrix)
+ nscut = round(ncol(Count_Matrix)/2)
+ colTotmillionreads = colSums(Count_Matrix)/1e6
+ counts.dataframe = as.data.frame(c())
+ rawrs = rowSums(Count_Matrix)
+ nonzerod = Count_Matrix[(rawrs > 0),] # remove all zero count genes
+ nzN = nrow(nonzerod)
+ nzrs = rowSums(nonzerod)
+ zN = allN - nzN
+ print('# Quantiles for non-zero row counts:',quote=F)
+ print(quantile(nzrs,probs=seq(0,1,0.1)),quote=F)
+ if (useNDF == T)
+ {
+ gt1rpin3 = rowSums(Count_Matrix/expandAsMatrix(colTotmillionreads,dim(Count_Matrix)) >= 1) >= nscut
+ lo = colSums(Count_Matrix[!gt1rpin3,])
+ workCM = Count_Matrix[gt1rpin3,]
+ cleanrs = rowSums(workCM)
+ cleanN = length(cleanrs)
+ meth = paste( "After removing",length(lo),"contigs with fewer than ",nscut," sample read counts >= 1 per million, there are",sep="")
+ print(paste("Read",allN,"contigs. Removed",zN,"contigs with no reads.",meth,cleanN,"contigs"),quote=F)
+ maint = paste('Filter >=1/million reads in >=',nscut,'samples')
+ } else {
+ useme = (nzrs > quantile(nzrs,filterquantile))
+ workCM = nonzerod[useme,]
+ lo = colSums(nonzerod[!useme,])
+ cleanrs = rowSums(workCM)
+ cleanN = length(cleanrs)
+ meth = paste("After filtering at count quantile =",filterquantile,", there are",sep="")
+ print(paste('Read',allN,"contigs. Removed",zN,"with no reads.",meth,cleanN,"contigs"),quote=F)
+ maint = paste('Filter below',filterquantile,'quantile')
+ }
+ cumPlot(rawrs=rawrs,cleanrs=cleanrs,maint=maint,myTitle=myTitle)
+ allgenes = rownames(workCM)
+ reg = "^chr([0-9]+):([0-9]+)-([0-9]+)"
+ genecards=" 0.8) # is ucsc style string
+ {
+ print("@@ using ucsc substitution for urls")
+ contigurls = paste0(ucsc,"&position=chr",testreg[,2],":",testreg[,3],"-",testreg[,4],"\'>",allgenes," ")
+ } else {
+ print.noquote("@@ using genecards substitution for urls")
+ contigurls = paste0(genecards,allgenes,"\'>",allgenes,"")
+ }
+ print(paste("# Total low count contigs per sample = ",paste(lo,collapse=',')),quote=F)
+ cmrowsums = rowSums(workCM)
+ TName=unique(group)[1]
+ CName=unique(group)[2]
+ if (is.null(mydesign)) {
+ if (length(subjects) == 0)
+ {
+ mydesign = model.matrix(~group)
+ }
+ else {
+ subjf = factor(subjects)
+ mydesign = model.matrix(~subjf+group) # we block on subject so make group last to simplify finding it
+ }
+ }
+ print.noquote(paste('Using samples:',paste(colnames(workCM),collapse=',')))
+ print.noquote('Using design matrix:')
+ print.noquote(mydesign)
+ if (doedgeR) {
+ sink('edgeR.log')
+ #### Setup DGEList object
+ DGEList = DGEList(counts=workCM, group = group)
+ DGEList = calcNormFactors(DGEList)
+
+ DGEList = estimateGLMCommonDisp(DGEList,mydesign)
+ comdisp = DGEList\$common.dispersion
+ DGEList = estimateGLMTrendedDisp(DGEList,mydesign)
+ if (edgeR_priordf > 0) {
+ print.noquote(paste("prior.df =",edgeR_priordf))
+ DGEList = estimateGLMTagwiseDisp(DGEList,mydesign,prior.df = edgeR_priordf)
+ } else {
+ DGEList = estimateGLMTagwiseDisp(DGEList,mydesign)
+ }
+ DGLM = glmFit(DGEList,design=mydesign)
+ DE = glmLRT(DGLM,coef=ncol(DGLM\$design)) # always last one - subject is first if needed
+ efflib = DGEList\$samples\$lib.size*DGEList\$samples\$norm.factors
+ normData = (1e+06*DGEList\$counts/efflib)
+ uoutput = cbind(
+ Name=as.character(rownames(DGEList\$counts)),
+ DE\$table,
+ adj.p.value=p.adjust(DE\$table\$PValue, method=fdrtype),
+ Dispersion=DGEList\$tagwise.dispersion,totreads=cmrowsums,normData,
+ DGEList\$counts
+ )
+ soutput = uoutput[order(DE\$table\$PValue),] # sorted into p value order - for quick toptable
+ goodness = gof(DGLM, pcutoff=fdrthresh)
+ if (sum(goodness\$outlier) > 0) {
+ print.noquote('GLM outliers:')
+ print(paste(rownames(DGLM)[(goodness\$outlier)],collapse=','),quote=F)
+ } else {
+ print('No GLM fit outlier genes found\n')
+ }
+ z = limma::zscoreGamma(goodness\$gof.statistic, shape=goodness\$df/2, scale=2)
+ pdf("edgeR_GoodnessofFit.pdf")
+ qq = qqnorm(z, panel.first=grid(), main="tagwise dispersion")
+ abline(0,1,lwd=3)
+ points(qq\$x[goodness\$outlier],qq\$y[goodness\$outlier], pch=16, col="maroon")
+ dev.off()
+ estpriorn = getPriorN(DGEList)
+ print(paste("Common Dispersion =",comdisp,"CV = ",sqrt(comdisp),"getPriorN = ",estpriorn),quote=F)
+ efflib = DGEList\$samples\$lib.size*DGEList\$samples\$norm.factors
+ normData = (1e+06*DGEList\$counts/efflib)
+ uniqueg = unique(group)
+ #### Plot MDS
+ sample_colors = match(group,levels(group))
+ sampleTypes = levels(factor(group))
+ print.noquote(sampleTypes)
+ pdf("edgeR_MDSplot.pdf")
+ plotMDS.DGEList(DGEList,main=paste("edgeR MDS for",myTitle),cex=0.5,col=sample_colors,pch=sample_colors)
+ legend(x="topleft", legend = sampleTypes,col=c(1:length(sampleTypes)), pch=19)
+ grid(col="blue")
+ dev.off()
+ colnames(normData) = paste( colnames(normData),'N',sep="_")
+ print(paste('Raw sample read totals',paste(colSums(nonzerod,na.rm=T),collapse=',')))
+ nzd = data.frame(log(nonzerod + 1e-2,10))
+ try( boxPlot(rawrs=nzd,cleanrs=log(normData,10),maint='TMM Normalisation',myTitle=myTitle,pdfname="edgeR_raw_norm_counts_box.pdf") )
+ write.table(soutput,file=out_edgeR, quote=FALSE, sep="\t",row.names=F)
+ tt = cbind(
+ Name=as.character(rownames(DGEList\$counts)),
+ DE\$table,
+ adj.p.value=p.adjust(DE\$table\$PValue, method=fdrtype),
+ Dispersion=DGEList\$tagwise.dispersion,totreads=cmrowsums
+ )
+ print.noquote("# edgeR Top tags\n")
+ tt = cbind(tt,URL=contigurls) # add to end so table isn't laid out strangely
+ tt = tt[order(DE\$table\$PValue),]
+ print.noquote(tt[1:50,])
+ deTags = rownames(uoutput[uoutput\$adj.p.value < fdrthresh,])
+ nsig = length(deTags)
+ print(paste('#',nsig,'tags significant at adj p=',fdrthresh),quote=F)
+ deColours = ifelse(deTags,'red','black')
+ pdf("edgeR_BCV_vs_abundance.pdf")
+ plotBCV(DGEList, cex=0.3, main="Biological CV vs abundance")
+ dev.off()
+ dg = DGEList[order(DE\$table\$PValue),]
+ #normData = (1e+06 * dg\$counts/expandAsMatrix(dg\$samples\$lib.size, dim(dg)))
+ efflib = dg\$samples\$lib.size*dg\$samples\$norm.factors
+ normData = (1e+06*dg\$counts/efflib)
+ outpdfname="edgeR_top_100_heatmap.pdf"
+ hmap2(normData,nsamp=100,TName=TName,group=group,outpdfname=outpdfname,myTitle=paste('edgeR Heatmap',myTitle))
+ outSmear = "edgeR_smearplot.pdf"
+ outMain = paste("Smear Plot for ",TName,' Vs ',CName,' (FDR@',fdrthresh,' N = ',nsig,')',sep='')
+ smearPlot(DGEList=DGEList,deTags=deTags, outSmear=outSmear, outMain = outMain)
+ qqPlot(descr=paste(myTitle,'edgeR adj p QQ plot'),pvector=tt\$adj.p.value,outpdf='edgeR_qqplot.pdf')
+ norm.factor = DGEList\$samples\$norm.factors
+ topresults.edgeR = soutput[which(soutput\$adj.p.value < fdrthresh), ]
+ edgeRcountsindex = which(allgenes %in% rownames(topresults.edgeR))
+ edgeRcounts = rep(0, length(allgenes))
+ edgeRcounts[edgeRcountsindex] = 1 # Create venn diagram of hits
+ sink()
+ } ### doedgeR
+ if (doDESeq2 == T)
+ {
+ sink("DESeq2.log")
+ # DESeq2
+ require('DESeq2')
+ library('RColorBrewer')
+ if (length(subjects) == 0)
+ {
+ pdata = data.frame(Name=colnames(workCM),Rx=group,row.names=colnames(workCM))
+ deSEQds = DESeqDataSetFromMatrix(countData = workCM, colData = pdata, design = formula(~ Rx))
+ } else {
+ pdata = data.frame(Name=colnames(workCM),Rx=group,subjects=subjects,row.names=colnames(workCM))
+ deSEQds = DESeqDataSetFromMatrix(countData = workCM, colData = pdata, design = formula(~ subjects + Rx))
+ }
+ #DESeq2 = DESeq(deSEQds,fitType='local',pAdjustMethod=fdrtype)
+ #rDESeq = results(DESeq2)
+ #newCountDataSet(workCM, group)
+ deSeqDatsizefac = estimateSizeFactors(deSEQds)
+ deSeqDatdisp = estimateDispersions(deSeqDatsizefac,fitType=DESeq_fitType)
+ resDESeq = nbinomWaldTest(deSeqDatdisp, pAdjustMethod=fdrtype)
+ rDESeq = as.data.frame(results(resDESeq))
+ rDESeq = cbind(Contig=rownames(workCM),rDESeq,NReads=cmrowsums)
+ srDESeq = rDESeq[order(rDESeq\$pvalue),]
+ write.table(srDESeq,file=out_DESeq2, quote=FALSE, sep="\t",row.names=F)
+ qqPlot(descr=paste(myTitle,'DESeq2 adj p qq plot'),pvector=rDESeq\$padj,outpdf='DESeq2_qqplot.pdf')
+ cat("# DESeq top 50\n")
+ rDESeq = cbind(Contig=rownames(workCM),rDESeq,NReads=cmrowsums,URL=contigurls)
+ srDESeq = rDESeq[order(rDESeq\$pvalue),]
+ print.noquote(srDESeq[1:50,])
+ topresults.DESeq = rDESeq[which(rDESeq\$padj < fdrthresh), ]
+ DESeqcountsindex = which(allgenes %in% rownames(topresults.DESeq))
+ DESeqcounts = rep(0, length(allgenes))
+ DESeqcounts[DESeqcountsindex] = 1
+ pdf("DESeq2_dispersion_estimates.pdf")
+ plotDispEsts(resDESeq)
+ dev.off()
+ ysmall = abs(min(rDESeq\$log2FoldChange))
+ ybig = abs(max(rDESeq\$log2FoldChange))
+ ylimit = min(4,ysmall,ybig)
+ pdf("DESeq2_MA_plot.pdf")
+ plotMA(resDESeq,main=paste(myTitle,"DESeq2 MA plot"),ylim=c(-ylimit,ylimit))
+ dev.off()
+ rlogres = rlogTransformation(resDESeq)
+ sampledists = dist( t( assay(rlogres) ) )
+ sdmat = as.matrix(sampledists)
+ pdf("DESeq2_sample_distance_plot.pdf")
+ heatmap.2(sdmat,trace="none",main=paste(myTitle,"DESeq2 sample distances"),
+ col = colorRampPalette( rev(brewer.pal(9, "RdBu")) )(255))
+ dev.off()
+ ###outpdfname="DESeq2_top50_heatmap.pdf"
+ ###hmap2(sresDESeq,nsamp=50,TName=TName,group=group,outpdfname=outpdfname,myTitle=paste('DESeq2 vst rlog Heatmap',myTitle))
+ sink()
+ result = try( (ppca = plotPCA( varianceStabilizingTransformation(deSeqDatdisp,blind=T), intgroup=c("Rx","Name")) ) )
+ if ("try-error" %in% class(result)) {
+ print.noquote('DESeq2 plotPCA failed.')
+ } else {
+ pdf("DESeq2_PCA_plot.pdf")
+ #### wtf - print? Seems needed to get this to work
+ print(ppca)
+ dev.off()
+ }
+ }
+
+ if (doVoom == T) {
+ sink('Voom.log')
+ if (doedgeR == F) {
+ #### Setup DGEList object
+ DGEList = DGEList(counts=workCM, group = group)
+ DGEList = calcNormFactors(DGEList)
+ DGEList = estimateGLMCommonDisp(DGEList,mydesign)
+ DGEList = estimateGLMTrendedDisp(DGEList,mydesign)
+ DGEList = estimateGLMTagwiseDisp(DGEList,mydesign)
+ DGEList = estimateGLMTagwiseDisp(DGEList,mydesign)
+ norm.factor = DGEList\$samples\$norm.factors
+ }
+ pdf("Voom_mean_variance_plot.pdf")
+ dat.voomed = voom(DGEList, mydesign, plot = TRUE, lib.size = colSums(workCM) * norm.factor)
+ dev.off()
+ # Use limma to fit data
+ fit = lmFit(dat.voomed, mydesign)
+ fit = eBayes(fit)
+ rvoom = topTable(fit, coef = length(colnames(mydesign)), adj = fdrtype, n = Inf, sort="none")
+ qqPlot(descr=paste(myTitle,'Voom-limma adj p QQ plot'),pvector=rvoom\$adj.P.Val,outpdf='Voom_qqplot.pdf')
+ rownames(rvoom) = rownames(workCM)
+ rvoom = cbind(rvoom,NReads=cmrowsums)
+ srvoom = rvoom[order(rvoom\$P.Value),]
+ write.table(srvoom,file=out_VOOM, quote=FALSE, sep="\t",row.names=F)
+ rvoom = cbind(rvoom,NReads=cmrowsums,URL=contigurls)
+ srvoom = rvoom[order(rvoom\$P.Value),]
+ cat("# Voom top 50\n")
+ print(srvoom[1:50,])
+ # Use an FDR cutoff to find interesting samples for edgeR, DESeq and voom/limma
+ topresults.voom = rvoom[which(rvoom\$adj.P.Val < fdrthresh), ]
+ voomcountsindex = which(allgenes %in% topresults.voom\$ID)
+ voomcounts = rep(0, length(allgenes))
+ voomcounts[voomcountsindex] = 1
+ sink()
+ }
+
+ if (doCamera) {
+ doGSEA(y=DGEList,design=mydesign,histgmt=histgmt,bigmt=bigmt,ntest=20,myTitle=myTitle,
+ outfname=paste(mt,"GSEA.xls",sep="_"),fdrthresh=fdrthresh,fdrtype=fdrtype)
+ }
+
+ if ((doDESeq2==T) || (doVoom==T) || (doedgeR==T)) {
+ if ((doVoom==T) && (doDESeq2==T) && (doedgeR==T)) {
+ vennmain = paste(mt,'Voom,edgeR and DESeq2 overlap at FDR=',fdrthresh)
+ counts.dataframe = data.frame(edgeR = edgeRcounts, DESeq2 = DESeqcounts,
+ VOOM_limma = voomcounts, row.names = allgenes)
+ } else if ((doDESeq2==T) && (doedgeR==T)) {
+ vennmain = paste(mt,'DESeq2 and edgeR overlap at FDR=',fdrthresh)
+ counts.dataframe = data.frame(edgeR = edgeRcounts, DESeq2 = DESeqcounts, row.names = allgenes)
+ } else if ((doVoom==T) && (doedgeR==T)) {
+ vennmain = paste(mt,'Voom and edgeR overlap at FDR=',fdrthresh)
+ counts.dataframe = data.frame(edgeR = edgeRcounts, VOOM_limma = voomcounts, row.names = allgenes)
+ }
+
+ if (nrow(counts.dataframe > 1)) {
+ counts.venn = vennCounts(counts.dataframe)
+ vennf = "Venn_significant_genes_overlap.pdf"
+ pdf(vennf)
+ vennDiagram(counts.venn,main=vennmain,col="maroon")
+ dev.off()
+ }
+ } #### doDESeq2 or doVoom
+
+}
+#### Done
+
+###sink(stdout(),append=T,type="message")
+builtin_gmt = ""
+history_gmt = ""
+history_gmt_name = ""
+out_edgeR = F
+out_DESeq2 = F
+out_VOOM = "$out_VOOM"
+doDESeq2 = $DESeq2.doDESeq2 # make these T or F
+doVoom = $doVoom
+doCamera = F
+doedgeR = $edgeR.doedgeR
+edgeR_priordf = 0
+
+
+#if $doVoom == "T":
+ out_VOOM = "$out_VOOM"
+#end if
+
+#if $DESeq2.doDESeq2 == "T":
+ out_DESeq2 = "$out_DESeq2"
+ DESeq_fitType = "$DESeq2.DESeq_fitType"
+#end if
+
+#if $edgeR.doedgeR == "T":
+ out_edgeR = "$out_edgeR"
+ edgeR_priordf = $edgeR.edgeR_priordf
+#end if
+
+
+if (sum(c(doedgeR,doVoom,doDESeq2)) == 0)
+{
+write("No methods chosen - nothing to do! Please try again after choosing one or more methods", stderr())
+quit(save="no",status=2)
+}
+
+Out_Dir = "$html_file.files_path"
+Input = "$input1"
+TreatmentName = "$treatment_name"
+TreatmentCols = "$Treat_cols"
+ControlName = "$control_name"
+ControlCols= "$Control_cols"
+org = "$input1.dbkey"
+if (org == "") { org = "hg19"}
+fdrtype = "$fdrtype"
+fdrthresh = $fdrthresh
+useNDF = $useNDF
+fQ = $fQ # non-differential centile cutoff
+myTitle = "$title"
+sids = strsplit("$subjectids",',')
+subjects = unlist(sids)
+nsubj = length(subjects)
+TCols = as.numeric(strsplit(TreatmentCols,",")[[1]])-1
+CCols = as.numeric(strsplit(ControlCols,",")[[1]])-1
+cat('Got TCols=')
+cat(TCols)
+cat('; CCols=')
+cat(CCols)
+cat('\n')
+useCols = c(TCols,CCols)
+if (file.exists(Out_Dir) == F) dir.create(Out_Dir)
+Count_Matrix = read.table(Input,header=T,row.names=1,sep='\t') #Load tab file assume header
+snames = colnames(Count_Matrix)
+nsamples = length(snames)
+if (nsubj > 0 & nsubj != nsamples) {
+options("show.error.messages"=T)
+mess = paste('Fatal error: Supplied subject id list',paste(subjects,collapse=','),
+ 'has length',nsubj,'but there are',nsamples,'samples',paste(snames,collapse=','))
+write(mess, stderr())
+quit(save="no",status=4)
+}
+if (length(subjects) != 0) {subjects = subjects[useCols]}
+Count_Matrix = Count_Matrix[,useCols] ### reorder columns
+rn = rownames(Count_Matrix)
+islib = rn %in% c('librarySize','NotInBedRegions')
+LibSizes = Count_Matrix[subset(rn,islib),][1] # take first
+Count_Matrix = Count_Matrix[subset(rn,! islib),]
+group = c(rep(TreatmentName,length(TCols)), rep(ControlName,length(CCols)) ) #Build a group descriptor
+group = factor(group, levels=c(ControlName,TreatmentName))
+colnames(Count_Matrix) = paste(group,colnames(Count_Matrix),sep="_") #Relable columns
+results = edgeIt(Count_Matrix=Count_Matrix,group=group, out_edgeR=out_edgeR, out_VOOM=out_VOOM, out_DESeq2=out_DESeq2,
+ fdrtype='BH',mydesign=NULL,priordf=edgeR_priordf,fdrthresh=fdrthresh,outputdir='.',
+ myTitle=myTitle,useNDF=F,libSize=c(),filterquantile=fQ,subjects=subjects,
+ doDESeq2=doDESeq2,doVoom=doVoom,doCamera=doCamera,doedgeR=doedgeR,org=org,
+ histgmt=history_gmt,bigmt=builtin_gmt,DESeq_fitType=DESeq_fitType)
+sessionInfo()
+]]>
+
+
+
+
+**What it does**
+
+Allows short read sequence counts from controlled experiments to be analysed for differentially expressed genes.
+Optionally adds a term for subject if not all samples are independent or if some other factor needs to be blocked in the design.
+
+**Input**
+
+Requires a count matrix as a tabular file. These are best made using the companion HTSeq_ based counter Galaxy wrapper
+and your fave gene model to generate inputs. Each row is a genomic feature (gene or exon eg) and each column the
+non-negative integer count of reads from one sample overlapping the feature.
+The matrix must have a header row uniquely identifying the source samples, and unique row names in
+the first column. Typically the row names are gene symbols or probe ids for downstream use in GSEA and other methods.
+
+**Specifying comparisons**
+
+This is basically dumbed down for two factors - case vs control.
+
+More complex interfaces are possible but painful at present.
+Probably need to specify a phenotype file to do this better.
+Work in progress. Send code.
+
+If you have (eg) paired samples and wish to include a term in the GLM to account for some other factor (subject in the case of paired samples),
+put a comma separated list of indicators for every sample (whether modelled or not!) indicating (eg) the subject number or
+A list of integers, one for each subject or an empty string if samples are all independent.
+If not empty, there must be exactly as many integers in the supplied integer list as there are columns (samples) in the count matrix.
+Integers for samples that are not in the analysis *must* be present in the string as filler even if not used.
+
+So if you have 2 pairs out of 6 samples, you need to put in unique integers for the unpaired ones
+eg if you had 6 samples with the first two independent but the second and third pairs each being from independent subjects. you might use
+8,9,1,1,2,2
+as subject IDs to indicate two paired samples from the same subject in columns 3/4 and 5/6
+
+**Methods available**
+
+You can run 3 popular Bioconductor packages available for count data.
+
+edgeR - see edgeR_ for details
+
+VOOM/limma - see limma_VOOM_ for details
+
+DESeq2 - see DESeq2_ for details
+
+and optionally camera in edgeR which works better if MSigDB is installed.
+
+**Outputs**
+
+Some helpful plots and analysis results. Note that most of these are produced using R code
+suggested by the excellent documentation and vignettes for the Bioconductor
+packages invoked. The Tool Factory is used to automatically lay these out for you to enjoy.
+
+**Note on Voom**
+
+The voom from limma version 3.16.6 help in R includes this from the authors - but you should read the paper to interpret this method.
+
+This function is intended to process RNA-Seq or ChIP-Seq data prior to linear modelling in limma.
+
+voom is an acronym for mean-variance modelling at the observational level.
+The key concern is to estimate the mean-variance relationship in the data, then use this to compute appropriate weights for each observation.
+Count data almost show non-trivial mean-variance relationships. Raw counts show increasing variance with increasing count size, while log-counts typically show a decreasing mean-variance trend.
+This function estimates the mean-variance trend for log-counts, then assigns a weight to each observation based on its predicted variance.
+The weights are then used in the linear modelling process to adjust for heteroscedasticity.
+
+In an experiment, a count value is observed for each tag in each sample. A tag-wise mean-variance trend is computed using lowess.
+The tag-wise mean is the mean log2 count with an offset of 0.5, across samples for a given tag.
+The tag-wise variance is the quarter-root-variance of normalized log2 counts per million values with an offset of 0.5, across samples for a given tag.
+Tags with zero counts across all samples are not included in the lowess fit. Optional normalization is performed using normalizeBetweenArrays.
+Using fitted values of log2 counts from a linear model fit by lmFit, variances from the mean-variance trend were interpolated for each observation.
+This was carried out by approxfun. Inverse variance weights can be used to correct for mean-variance trend in the count data.
+
+
+Author(s)
+
+Charity Law and Gordon Smyth
+
+References
+
+Law, CW (2013). Precision weights for gene expression analysis. PhD Thesis. University of Melbourne, Australia.
+
+Law, CW, Chen, Y, Shi, W, Smyth, GK (2013). Voom! Precision weights unlock linear model analysis tools for RNA-seq read counts.
+Technical Report 1 May 2013, Bioinformatics Division, Walter and Eliza Hall Institute of Medical Reseach, Melbourne, Australia.
+http://www.statsci.org/smyth/pubs/VoomPreprint.pdf
+
+See Also
+
+A voom case study is given in the edgeR User's Guide.
+
+vooma is a similar function but for microarrays instead of RNA-seq.
+
+
+***old rant on changes to Bioconductor package variable names between versions***
+
+The edgeR authors made a small cosmetic change in the name of one important variable (from p.value to PValue)
+breaking this and all other code that assumed the old name for this variable,
+between edgeR2.4.4 and 2.4.6 (the version for R 2.14 as at the time of writing).
+This means that all code using edgeR is sensitive to the version. I think this was a very unwise thing
+to do because it wasted hours of my time to track down and will similarly cost other edgeR users dearly
+when their old scripts break. This tool currently now works with 2.4.6.
+
+**Note on prior.N**
+
+http://seqanswers.com/forums/showthread.php?t=5591 says:
+
+*prior.n*
+
+The value for prior.n determines the amount of smoothing of tagwise dispersions towards the common dispersion.
+You can think of it as like a "weight" for the common value. (It is actually the weight for the common likelihood
+in the weighted likelihood equation). The larger the value for prior.n, the more smoothing, i.e. the closer your
+tagwise dispersion estimates will be to the common dispersion. If you use a prior.n of 1, then that gives the
+common likelihood the weight of one observation.
+
+In answer to your question, it is a good thing to squeeze the tagwise dispersions towards a common value,
+or else you will be using very unreliable estimates of the dispersion. I would not recommend using the value that
+you obtained from estimateSmoothing()---this is far too small and would result in virtually no moderation
+(squeezing) of the tagwise dispersions. How many samples do you have in your experiment?
+What is the experimental design? If you have few samples (less than 6) then I would suggest a prior.n of at least 10.
+If you have more samples, then the tagwise dispersion estimates will be more reliable,
+so you could consider using a smaller prior.n, although I would hesitate to use a prior.n less than 5.
+
+
+From Bioconductor Digest, Vol 118, Issue 5, Gordon writes:
+
+Dear Dorota,
+
+The important settings are prior.df and trend.
+
+prior.n and prior.df are related through prior.df = prior.n * residual.df,
+and your experiment has residual.df = 36 - 12 = 24. So the old setting of
+prior.n=10 is equivalent for your data to prior.df = 240, a very large
+value. Going the other way, the new setting of prior.df=10 is equivalent
+to prior.n=10/24.
+
+To recover old results with the current software you would use
+
+ estimateTagwiseDisp(object, prior.df=240, trend="none")
+
+To get the new default from old software you would use
+
+ estimateTagwiseDisp(object, prior.n=10/24, trend=TRUE)
+
+Actually the old trend method is equivalent to trend="loess" in the new
+software. You should use plotBCV(object) to see whether a trend is
+required.
+
+Note you could also use
+
+ prior.n = getPriorN(object, prior.df=10)
+
+to map between prior.df and prior.n.
+
+----
+
+**Attributions**
+
+edgeR - edgeR_
+
+VOOM/limma - limma_VOOM_
+
+DESeq2 - DESeq2_ for details
+
+See above for Bioconductor package documentation for packages exposed in Galaxy by this tool and app store package.
+
+Galaxy_ (that's what you are using right now!) for gluing everything together
+
+Otherwise, all code and documentation comprising this tool was written by Ross Lazarus and is
+licensed to you under the LGPL_ like other rgenetics artefacts
+
+.. _LGPL: http://www.gnu.org/copyleft/lesser.html
+.. _HTSeq: http://www-huber.embl.de/users/anders/HTSeq/doc/index.html
+.. _edgeR: http://www.bioconductor.org/packages/release/bioc/html/edgeR.html
+.. _DESeq2: http://www.bioconductor.org/packages/release/bioc/html/DESeq2.html
+.. _limma_VOOM: http://www.bioconductor.org/packages/release/bioc/html/limma.html
+.. _Galaxy: http://getgalaxy.org
+
+
+
+
+
diff -r 5b6af671d985 -r 8051d14cf819 test-data/edgeRtest1out.html
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/edgeRtest1out.html Sun Dec 22 01:32:29 2013 -0500
@@ -0,0 +1,733 @@
+
+
+
+
+
Galaxy Tool "DifferentialCounts" run at 07/08/2013 15:46:55
+
DESeq2 images and outputs
+(Click on a thumbnail image to download the corresponding original PDF image)
+
+
+
+
+
+
+
+
DESeq2 log output
+
+
+
+# DESeq top 50
+
+ Contig baseMean log2FoldChange lfcSE pvalue padj NReads URL
+
+Mir192 Mir192 271352.97636 6.965264 0.2150593 4.096936e-230 4.576278e-227 2325567 Mir192
+
+Mir122a Mir122a 10112.31117 10.312083 0.3292695 2.649323e-215 1.479647e-212 90428 Mir122a
+
+Mir149 Mir149 810.35429 -6.911118 0.2341392 1.735537e-191 6.461982e-189 6164 Mir149
+
+Mir23a Mir23a 1289.18043 -3.104086 0.1191688 1.424246e-149 3.977206e-147 10118 Mir23a
+
+Mir181d Mir181d 275.22797 -3.581172 0.1778187 3.329371e-90 7.437816e-88 2139 Mir181d
+
+Mir204 Mir204 347.57397 -7.284200 0.3771119 3.959336e-83 7.370965e-81 2601 Mir204
+
+Mir23b Mir23b 2028.55377 -2.065110 0.1085802 1.182361e-80 1.886711e-78 16387 Mir23b
+
+Mir27a Mir27a 2788.72629 -3.016676 0.1688167 2.036708e-71 2.843754e-69 21886 Mir27a
+
+Mir195 Mir195 519.86200 -3.152795 0.1784796 7.838123e-70 9.727982e-68 3962 Mir195
+
+Mir194-2 Mir194-2 391.65678 5.222911 0.3099275 1.013490e-63 1.132068e-61 3570 Mir194-2
+
+Mir208b Mir208b 1649.77924 -11.396172 0.6771238 1.464479e-63 1.487112e-61 14756 Mir208b
+
+Mir10b Mir10b 27820.40551 -5.071453 0.3044889 2.754493e-62 2.563974e-60 197340 Mir10b
+
+Mir181c Mir181c 2765.96510 -3.660964 0.2275711 3.141153e-58 2.698975e-56 23605 Mir181c
+
+Mir208a Mir208a 616.76981 -10.356524 0.6559217 3.688385e-56 2.942804e-54 4638 Mir208a
+
+Mir490 Mir490 220.99790 -8.059660 0.5142876 2.369067e-55 1.764165e-53 1741 Mir490
+
+Mir203 Mir203 772.92882 1.990849 0.1274099 4.877239e-55 3.404923e-53 6739 Mir203
+
+Mir215 Mir215 152.78082 -3.004380 0.1939090 3.822339e-54 2.511502e-52 1182 Mir215
+
+Dnm3os Dnm3os 179.61643 -3.278392 0.2166491 9.922020e-52 6.157165e-50 1401 Dnm3os
+
+Mir214 Mir214 134.69038 -3.216444 0.2154916 2.230148e-50 1.311093e-48 1048 Mir214
+
+Mir21 Mir21 26121.31011 2.963903 0.2008617 2.817434e-49 1.573537e-47 229120 Mir21
+
+Mir1948 Mir1948 263.89527 7.074045 0.4867225 7.374030e-48 3.922282e-46 2404 Mir1948
+
+Mir27b Mir27b 76478.05753 -1.904653 0.1312889 1.088626e-47 5.527251e-46 625308 Mir27b
+
+Rabggtb Rabggtb 2257.19195 1.988368 0.1401741 1.134862e-45 5.511484e-44 19535 Rabggtb
+
+Mir499 Mir499 712.45950 -10.577061 0.7528467 7.766408e-45 3.614616e-43 6527 Mir499
+
+Mir101b Mir101b 6846.19683 3.791681 0.2809666 1.670548e-41 7.464007e-40 59019 Mir101b
+
+Mir132 Mir132 106.46062 -2.797928 0.2083376 4.046163e-41 1.738294e-39 857 Mir132
+
+Mir143hg Mir143hg 180217.77425 -2.169143 0.1685614 6.764675e-38 2.798571e-36 1407364 Mir143hg
+
+Mir143 Mir143 179219.35960 -2.170303 0.1696199 1.746403e-37 6.966899e-36 1399819 Mir143
+
+Mir155 Mir155 57.66182 -3.788079 0.3056585 2.845488e-35 1.096004e-33 463 Mir155
+
+Mir322 Mir322 899.53469 -3.126011 0.2622595 9.363374e-33 3.486296e-31 7074 Mir322
+
+Mir378 Mir378 483.21548 -2.994300 0.2577321 3.343457e-31 1.204723e-29 4075 Mir378
+
+Mir24-2 Mir24-2 424.48288 -2.712674 0.2361028 1.491830e-30 5.049617e-29 3470 Mir24-2
+
+Mir3074-2 Mir3074-2 424.48288 -2.712674 0.2361028 1.491830e-30 5.049617e-29 3470 Mir3074-2
+
+Mir199b Mir199b 47.84725 -5.294373 0.4644474 4.215162e-30 1.384805e-28 370 Mir199b
+
+Mir802 Mir802 166.83414 8.816580 0.7782636 9.478527e-30 3.025004e-28 1514 Mir802
+
+Mir125b-2 Mir125b-2 493.08516 -2.919341 0.2631193 1.324797e-28 4.110551e-27 3837 Mir125b-2
+
+Mir301 Mir301 260.53406 -1.676984 0.1526772 4.570133e-28 1.379686e-26 2119 Mir301
+
+Snord104 Snord104 3851.90119 2.386573 0.2173857 4.847914e-28 1.425032e-26 33458 Snord104
+
+Mir150 Mir150 553.20599 -2.836881 0.2595088 8.127991e-28 2.327940e-26 4229 Mir150
+
+Mir148a Mir148a 118994.46955 2.678852 0.2481801 3.675045e-27 1.026256e-25 1002397 Mir148a
+
+5430416N02Rik 5430416N02Rik 62.15966 3.089960 0.2941123 8.101331e-26 2.207119e-24 564 5430416N02Rik
+
+Mir193 Mir193 45.70861 4.991530 0.4814098 3.446492e-25 9.166027e-24 421 Mir193
+
+Mir3073 Mir3073 98.93199 8.208709 0.7944742 5.036320e-25 1.308272e-23 904 Mir3073
+
+Mir125b-1 Mir125b-1 79.01988 -3.020660 0.2937360 8.355633e-25 2.121191e-23 609 Mir125b-1
+
+2610203C20Rik 2610203C20Rik 79.17666 -3.023491 0.2948614 1.136165e-24 2.820214e-23 610 2610203C20Rik
+
+Mir181a-1 Mir181a-1 59.53826 -3.151487 0.3211628 9.923707e-23 2.409735e-21 506 Mir181a-1
+
+Mir184 Mir184 32.23796 -4.865023 0.4962776 1.092606e-22 2.596683e-21 247 Mir184
+
+Mir199a-2 Mir199a-2 44.84878 -3.422216 0.3545647 4.826269e-22 1.123113e-20 352 Mir199a-2
+
+Snord91a Snord91a 168.95251 2.700421 0.2835464 1.670595e-21 3.808275e-20 1437 Snord91a
+
+Mir200b Mir200b 87.13638 5.940702 0.6338554 7.094881e-21 1.584996e-19 888 Mir200b
+
+
+
+
+
DifferentialCounts log output
+
+
+
+Loading required package: gtools
+
+Loading required package: gdata
+
+gdata: read.xls support for 'XLS' (Excel 97-2004) files ENABLED.
+
+gdata: read.xls support for 'XLSX' (Excel 2007+) files ENABLED.
+
+Attaching package: ‘gdata’
+
+The following object is masked from ‘package:stats’:
+
+ nobs
+
+The following object is masked from ‘package:utils’:
+
+ object.size
+
+Loading required package: caTools
+
+Loading required package: grid
+
+Loading required package: KernSmooth
+
+KernSmooth 2.23 loaded
+
+Copyright M. P. Wand 1997-2009
+
+Loading required package: MASS
+
+Attaching package: ‘gplots’
+
+The following object is masked from ‘package:stats’:
+
+ lowess
+
+Loading required package: methods
+
+Loading required package: limma
+
+Loading required package: splines
+
+Loading required package: DESeq2
+
+Loading required package: GenomicRanges
+
+Loading required package: BiocGenerics
+
+Loading required package: parallel
+
+Attaching package: ‘BiocGenerics’
+
+The following object is masked from ‘package:parallel’:
+
+ clusterApply, clusterApplyLB, clusterCall, clusterEvalQ, clusterExport, clusterMap, parApply, parCapply, parLapply, parLapplyLB, parRapply, parSapply, parSapplyLB
+
+The following object is masked from ‘package:gdata’:
+
+ combine
+
+The following object is masked from ‘package:stats’:
+
+ xtabs
+
+The following object is masked from ‘package:base’:
+
+ anyDuplicated, as.data.frame, cbind, colnames, duplicated, eval, Filter, Find, get, intersect, lapply, Map, mapply, match, mget, order, paste, pmax, pmax.int, pmin, pmin.int, Position, rank, rbind, Reduce, rep.int, rownames, sapply, setdiff, sort, table, tapply, union, unique, unlist
+
+Loading required package: IRanges
+
+Attaching package: ‘IRanges’
+
+The following object is masked from ‘package:gplots’:
+
+ space
+
+The following object is masked from ‘package:caTools’:
+
+ runmean
+
+The following object is masked from ‘package:gdata’:
+
+ trim
+
+Loading required package: Biobase
+
+Welcome to Bioconductor
+
+ Vignettes contain introductory material; view with 'browseVignettes()'. To cite Bioconductor, see 'citation("Biobase")', and for packages 'citation("pkgname")'.
+
+Loading required package: lattice
+
+Loading required package: Rcpp
+
+Loading required package: RcppArmadillo
+
+Attaching package: ‘DESeq2’
+
+The following object is masked from ‘package:limma’:
+
+ plotMA
+
+gene-wise dispersion estimates
+
+mean-dispersion relationship
+
+final dispersion estimates
+
+you had estimated dispersions, replacing these
+
+gene-wise dispersion estimates
+
+mean-dispersion relationship
+
+final dispersion estimates
+
+you had estimated dispersions, replacing these
+
+gene-wise dispersion estimates
+
+mean-dispersion relationship
+
+final dispersion estimates
+
+Warning messages:
+
+1: In bplt(at[i], wid = width[i], stats = z$stats[, i], out = z$out[z$group == :
+
+ Outlier (-Inf) in boxplot 1 is not drawn
+
+2: In bplt(at[i], wid = width[i], stats = z$stats[, i], out = z$out[z$group == :
+
+ Outlier (-Inf) in boxplot 3 is not drawn
+
+3: In bxp(list(stats = c(-0.430723026286372, -0.127900608036896, 0.474159383291067, :
+
+ some notches went outside hinges ('box'): maybe set notch=FALSE
+
+4: In par(defpar) : calling par(new=TRUE) with no plot
+
+
+
+
+
VOOM images and outputs
+(Click on a thumbnail image to download the corresponding original PDF image)
+
+
+
+
+
+
+
VOOM log output
+
+
+
+# VOOM top 50
+
+ ID logFC AveExpr t P.Value adj.P.Val B NReads URL
+
+Mir192 Mir192 6.948883 14.6763803 42.722954 2.301199e-16 2.625668e-13 27.266471 2325567 Mir192
+
+Mir208a Mir208a -11.015018 3.9395538 -23.252407 1.118938e-12 6.383542e-10 17.208662 4638 Mir208a
+
+Mir122a Mir122a 10.426125 8.1698641 21.722912 2.859682e-12 1.087633e-09 17.760171 90428 Mir122a
+
+Mir149 Mir149 -7.030463 6.3160807 -20.883835 4.915491e-12 1.402144e-09 17.277609 6164 Mir149
+
+Mir208b Mir208b -12.433228 4.6076218 -19.592458 1.179199e-11 2.690931e-09 15.683666 14756 Mir208b
+
+Mir10b Mir10b -5.130915 12.2628672 -18.242023 3.124991e-11 4.963978e-09 16.221503 197340 Mir10b
+
+Mir143hg Mir143hg -2.249221 16.2444825 -18.082481 3.521739e-11 4.963978e-09 16.026695 1407364 Mir143hg
+
+Mir143 Mir143 -2.251067 16.2358599 -18.081481 3.524391e-11 4.963978e-09 16.026084 1399819 Mir143
+
+Mir499 Mir499 -11.567529 3.7874598 -17.942086 3.915496e-11 4.963978e-09 14.821741 6527 Mir499
+
+Mir802 Mir802 9.158434 2.9157675 17.316522 6.338616e-11 7.232360e-09 14.381577 1514 Mir802
+
+Mir3073 Mir3073 8.420542 2.5457189 16.702657 1.033066e-10 1.036045e-08 13.985845 904 Mir3073
+
+Mir148a Mir148a 2.638213 15.4435820 16.548188 1.171186e-10 1.036045e-08 14.814792 1002397 Mir148a
+
+Mir101b Mir101b 3.765722 10.8508440 16.538566 1.180419e-10 1.036045e-08 14.900027 59019 Mir101b
+
+Mir490 Mir490 -8.474378 3.7506957 -16.259650 1.484816e-10 1.210125e-08 13.424617 1741 Mir490
+
+Mir21 Mir21 2.938537 13.1642917 15.375404 3.148335e-10 2.394833e-08 13.867698 229120 Mir21
+
+Mir181c Mir181c -3.742560 9.6295577 -15.242361 3.537063e-10 2.522368e-08 13.810405 23605 Mir181c
+
+Mir204 Mir204 -7.684425 4.7751735 -15.033484 4.254268e-10 2.855364e-08 12.822427 2601 Mir204
+
+Mir23a Mir23a -3.165768 8.7896592 -14.631179 6.110682e-10 3.873493e-08 13.269174 10118 Mir23a
+
+Mir181d Mir181d -3.636211 6.3713218 -14.317073 8.157508e-10 4.898798e-08 12.956333 2139 Mir181d
+
+Mir133b Mir133b -6.493549 1.2544862 -13.969968 1.129934e-09 6.446275e-08 11.982684 159 Mir133b
+
+Mir27a Mir27a -3.106935 9.9255796 -13.838251 1.281011e-09 6.960160e-08 12.513086 21886 Mir27a
+
+Mir194-2 Mir194-2 5.264136 6.0897615 13.044012 2.792884e-09 1.448491e-07 11.715753 3570 Mir194-2
+
+Mir195 Mir195 -3.216595 7.4509350 -12.869478 3.332788e-09 1.653353e-07 11.587523 3962 Mir195
+
+Mir27b Mir27b -1.976376 15.0957731 -11.756036 1.082197e-08 5.144946e-07 10.127719 625308 Mir27b
+
+Mir378 Mir378 -3.097393 7.3832049 -11.684163 1.171371e-08 5.346138e-07 10.329692 4075 Mir378
+
+Snord104 Snord104 2.337374 10.6109024 11.495675 1.444482e-08 6.339052e-07 10.023395 33458 Snord104
+
+Mir1983 Mir1983 -5.895500 0.9931851 -11.445812 1.527548e-08 6.441605e-07 9.749260 101 Mir1983
+
+Mir322 Mir322 -3.296618 8.2153415 -11.415362 1.580762e-08 6.441605e-07 10.008472 7074 Mir322
+
+Mir200a Mir200a 6.191561 1.7981309 11.322172 1.756229e-08 6.909853e-07 9.662295 264 Mir200a
+
+Mir215 Mir215 -3.045873 5.7544234 -11.148134 2.141822e-08 8.082459e-07 9.753268 1182 Mir215
+
+Dnm3os Dnm3os -3.363344 5.8607432 -11.092261 2.283960e-08 8.082459e-07 9.689496 1401 Dnm3os
+
+Mir182 Mir182 4.903995 7.1511683 11.074468 2.331304e-08 8.082459e-07 9.658842 7189 Mir182
+
+Mir181a-2 Mir181a-2 -3.048298 6.9414651 -11.072128 2.337609e-08 8.082459e-07 9.644017 2817 Mir181a-2
+
+Mir1948 Mir1948 7.195525 4.5513493 11.005492 2.524936e-08 8.473388e-07 9.341794 2404 Mir1948
+
+Mir214 Mir214 -3.280874 5.4784451 -10.768257 3.332555e-08 1.086413e-06 9.318504 1048 Mir214
+
+Mir153 Mir153 -5.963803 1.4386315 -10.727082 3.498742e-08 1.093990e-06 9.035569 140 Mir153
+
+Cyp3a25 Cyp3a25 6.318200 1.4888933 10.698226 3.620443e-08 1.093990e-06 9.024973 226 Cyp3a25
+
+Gm5441 Gm5441 -5.982176 1.4484953 -10.692891 3.643436e-08 1.093990e-06 9.000362 142 Gm5441
+
+Mir125b-2 Mir125b-2 -3.077678 7.4316058 -10.446668 4.893073e-08 1.431538e-06 8.884250 3837 Mir125b-2
+
+Mir133a-1 Mir133a-1 -5.144671 0.5903264 -10.358205 5.447229e-08 1.553822e-06 8.575535 60 Mir133a-1
+
+1110038B12Rik 1110038B12Rik 2.226702 10.8487089 10.194609 6.655312e-08 1.852125e-06 8.439308 37066 1110038B12Rik
+
+Mir132 Mir132 -2.847559 5.3211839 -10.110952 7.380297e-08 2.004981e-06 8.531491 857 Mir132
+
+Rabggtb Rabggtb 1.935779 9.9874171 9.928995 9.262821e-08 2.457879e-06 8.133384 19535 Rabggtb
+
+Mir504 Mir504 -5.256127 0.6221088 -9.892894 9.693595e-08 2.513725e-06 8.068853 69 Mir504
+
+Mir150 Mir150 -2.938531 7.6297870 -9.842102 1.033602e-07 2.620755e-06 8.116464 4229 Mir150
+
+Mir199b Mir199b -5.752816 2.8805143 -9.823920 1.057683e-07 2.623514e-06 7.979387 370 Mir199b
+
+Mir23b Mir23b -2.124129 9.8141190 -9.806316 1.081569e-07 2.625681e-06 7.979464 16387 Mir23b
+
+Mir24-2 Mir24-2 -2.833979 7.3083691 -9.767192 1.136724e-07 2.646944e-06 8.030550 3470 Mir24-2
+
+Mir3074-2 Mir3074-2 -2.833979 7.3083691 -9.767192 1.136724e-07 2.646944e-06 8.030550 3470 Mir3074-2
+
+Mir155 Mir155 -3.906600 3.9899000 -9.732173 1.188627e-07 2.712448e-06 8.046518 463 Mir155
+
+
+
+
+
edgeR images and outputs
+(Click on a thumbnail image to download the corresponding original PDF image)
+
+
+
+
+
+
+
+
+
+
edgeR log output
+
+
+
+[1] prior.df = 8
+
+[1] "No GLM fit outlier genes found\n"
+
+[1] Common Dispersion = 0.228651460998105 CV = 0.478175136323613 getPriorN = 3.33333333333333
+
+[1] heart liver
+
+[1] "Raw sample read totals 2443751,1644652,1682104,1806045,1440960,1341813,2888924,1428365"
+
+[1] raw contig counts by sample:
+
+ liver_X11706Liv_CAAA liver_X11700Liv_ATTC liver_X11698Liv_ACTG liver_X11699Liv_ATGA heart_X11706He_AGTTC heart_X11699He_GGCTA heart_X11698He_TAGCT heart_X11700He_CTTGT
+
+ Min. :0.0043 Min. :0.0043 Min. :0.0043 Min. :0.0043 Min. :0.0043 Min. :0.0043 Min. :0.0043 Min. :0.0043
+
+ 1st Qu.:0.3032 1st Qu.:0.0043 1st Qu.:0.3032 1st Qu.:0.0043 1st Qu.:0.0043 1st Qu.:0.0043 1st Qu.:0.0043 1st Qu.:0.0043
+
+ Median :0.7789 Median :0.6031 Median :0.6998 Median :0.6031 Median :0.4786 Median :0.4786 Median :0.4786 Median :0.4786
+
+ Mean :1.0519 Mean :1.0343 Mean :0.9855 Mean :0.9966 Mean :0.9210 Mean :0.9428 Mean :1.0205 Mean :0.9753
+
+ 3rd Qu.:1.5410 3rd Qu.:1.6335 3rd Qu.:1.4473 3rd Qu.:1.5534 3rd Qu.:1.5770 3rd Qu.:1.5855 3rd Qu.:1.7161 3rd Qu.:1.6022
+
+ Max. :5.8209 Max. :5.6905 Max. :5.7999 Max. :5.7215 Max. :5.3609 Max. :5.3589 Max. :5.6967 Max. :5.3702
+
+ NA's :650 NA's :969 NA's :664 NA's :886 NA's :902 NA's :957 NA's :821 NA's :950
+
+[1] normalised contig counts by sample:
+
+ liver_X11706Liv_CAAA liver_X11700Liv_ATTC liver_X11698Liv_ACTG liver_X11699Liv_ATGA heart_X11706He_AGTTC heart_X11699He_GGCTA heart_X11698He_TAGCT heart_X11700He_CTTGT
+
+ Min. :-Inf Min. :-Inf Min. :-Inf Min. :-Inf Min. :-Inf Min. :-Inf Min. :-Inf Min. :-Inf
+
+ 1st Qu.: 0 1st Qu.:-Inf 1st Qu.: 0 1st Qu.:-Inf 1st Qu.:-Inf 1st Qu.:-Inf 1st Qu.:-Inf 1st Qu.:-Inf
+
+ Median : 0 Median : 0 Median : 0 Median : 0 Median : 0 Median : 0 Median : 0 Median : 0
+
+ Mean :-Inf Mean :-Inf Mean :-Inf Mean :-Inf Mean :-Inf Mean :-Inf Mean :-Inf Mean :-Inf
+
+ 3rd Qu.: 1 3rd Qu.: 1 3rd Qu.: 1 3rd Qu.: 1 3rd Qu.: 1 3rd Qu.: 1 3rd Qu.: 1 3rd Qu.: 1
+
+ Max. : 6 Max. : 6 Max. : 6 Max. : 5 Max. : 5 Max. : 5 Max. : 6 Max. : 5
+
+[1] Using ncol rawrs= 8
+
+[1] # edgeR Top tags\n
+
+ Name logFC logCPM LR PValue adj.p.value Dispersion totreads URL
+
+Mir208a Mir208a -11.840751 8.465017 594.16946 3.104543e-131 3.542284e-128 0.05171220 4638 Mir208a
+
+Mir149 Mir149 -7.008984 8.861767 484.30321 2.473909e-107 1.411365e-104 0.04959937 6164 Mir149
+
+Mir208b Mir208b -13.291635 9.905945 417.69758 7.737463e-93 2.942815e-90 0.10508096 14756 Mir208b
+
+Mir122a Mir122a 10.514683 12.478088 415.17429 2.740525e-92 7.817349e-90 0.10803882 90428 Mir122a
+
+Mir204 Mir204 -7.498162 7.634507 341.30678 3.313430e-76 7.561247e-74 0.06907958 2601 Mir204
+
+Mir499 Mir499 -13.577454 8.700078 325.79199 7.930755e-73 1.508165e-70 0.12042284 6527 Mir499
+
+Mir490 Mir490 -8.534394 6.991023 303.17184 6.710366e-68 1.093790e-65 0.07949711 1741 Mir490
+
+Mir192 Mir192 6.953853 17.169364 217.22867 3.638307e-49 5.189135e-47 0.12700995 2325567 Mir192
+
+Mir802 Mir802 11.440805 6.593380 212.88059 3.231644e-48 4.097007e-46 0.12273671 1514 Mir802
+
+Mir1948 Mir1948 7.418142 7.252734 195.66958 1.840248e-44 2.099723e-42 0.12060221 2404 Mir1948
+
+Mir194-2 Mir194-2 5.298950 7.811522 191.85588 1.250960e-43 1.297587e-41 0.08670751 3570 Mir194-2
+
+Mir23a Mir23a -3.153807 9.529402 177.53185 1.676248e-40 1.593833e-38 0.04442763 10118 Mir23a
+
+Mir181c Mir181c -3.767686 10.639598 169.87390 7.883295e-39 6.919107e-37 0.06368883 23605 Mir181c
+
+Mir3073 Mir3073 10.686337 5.859950 164.86740 9.778593e-38 7.969554e-36 0.14069249 904 Mir3073
+
+Mir181d Mir181d -3.643963 7.300371 162.18591 3.767663e-37 2.865936e-35 0.05729574 2139 Mir181d
+
+Mir195 Mir195 -3.203683 8.215089 150.20548 1.563314e-34 1.114838e-32 0.05235020 3962 Mir195
+
+Mir10b Mir10b -5.182616 13.946466 147.24793 6.926819e-34 4.649118e-32 0.12268790 197340 Mir10b
+
+Mir101b Mir101b 3.759962 11.863187 136.31359 1.703812e-31 1.080028e-29 0.07961343 59019 Mir101b
+
+Mir378 Mir378 -3.115599 8.119617 126.76408 2.092233e-29 1.256441e-27 0.05942391 4075 Mir378
+
+Mir27a Mir27a -3.064687 10.642480 124.98911 5.117477e-29 2.919520e-27 0.06113852 21886 Mir27a
+
+Mir182 Mir182 5.057509 8.846381 123.17765 1.275060e-28 6.927826e-27 0.13653707 7189 Mir182
+
+Mir322 Mir322 -3.194159 9.012888 107.34926 3.732413e-25 1.935765e-23 0.07536483 7074 Mir322
+
+Mir199b Mir199b -5.520119 4.792610 102.10724 5.259607e-24 2.609223e-22 0.13417024 370 Mir199b
+
+Mir181a-2 Mir181a-2 -3.000177 7.637692 101.38361 7.578821e-24 3.603098e-22 0.06896654 2817 Mir181a-2
+
+Mir125b-2 Mir125b-2 -2.987759 8.144514 91.72544 9.957640e-22 4.488356e-20 0.07737381 3837 Mir125b-2
+
+Dnm3os Dnm3os -3.331215 6.686950 91.67250 1.022763e-21 4.488356e-20 0.08810497 1401 Dnm3os
+
+Mir184 Mir184 -5.111350 4.234160 84.35542 4.133639e-20 1.686711e-18 0.13502324 247 Mir184
+
+Mir215 Mir215 -3.058208 6.447966 84.35278 4.139167e-20 1.686711e-18 0.08138517 1182 Mir215
+
+Mir133b Mir133b -8.383611 3.584760 83.96681 5.031517e-20 1.960318e-18 0.17482280 159 Mir133b
+
+Mir150 Mir150 -2.883446 8.307765 83.91918 5.154210e-20 1.960318e-18 0.08008123 4229 Mir150
+
+Mir3074-2 Mir3074-2 -2.778308 7.935651 83.74839 5.619282e-20 2.040616e-18 0.07424646 3470 Mir3074-2
+
+Mir24-2 Mir24-2 -2.778307 7.935651 83.71222 5.723024e-20 2.040616e-18 0.07427992 3470 Mir24-2
+
+Mir193 Mir193 5.176579 4.801090 83.19222 7.445011e-20 2.574169e-18 0.14794861 421 Mir193
+
+Scarna17 Scarna17 2.182159 9.244479 81.91330 1.421894e-19 4.771710e-18 0.04982909 9224 Scarna17
+
+Mir214 Mir214 -3.271172 6.271755 80.43948 2.997458e-19 9.771712e-18 0.09566584 1048 Mir214
+
+Snord104 Snord104 2.330488 11.053611 79.50529 4.809369e-19 1.524303e-17 0.05915990 33458 Snord104
+
+Mir200a Mir200a 7.201555 4.139422 77.35503 1.428304e-18 4.365755e-17 0.19287764 264 Mir200a
+
+Mir200b Mir200b 6.525423 5.752604 77.31985 1.453976e-18 4.365755e-17 0.26237966 888 Mir200b
+
+Mir21 Mir21 2.923147 13.825255 75.51798 3.620938e-18 1.059357e-16 0.09395834 229120 Mir21
+
+Mir203 Mir203 1.956427 8.767610 75.17870 4.299815e-18 1.226522e-16 0.04381710 6739 Mir203
+
+Mir155 Mir155 -3.886731 5.068563 73.81316 8.587210e-18 2.389758e-16 0.12522673 463 Mir155
+
+Cyp3a25 Cyp3a25 8.681501 3.972085 72.29680 1.851471e-17 5.029829e-16 0.23125383 226 Cyp3a25
+
+Rabggtb Rabggtb 1.934093 10.298211 72.02043 2.129809e-17 5.651422e-16 0.04596646 19535 Rabggtb
+
+Mir23b Mir23b -2.100584 10.184110 71.44225 2.854935e-17 7.403367e-16 0.05416378 16387 Mir23b
+
+Snord52 Snord52 2.207491 10.217554 71.27974 3.100027e-17 7.860292e-16 0.05941483 18059 Snord52
+
+Gm5441 Gm5441 -6.881248 3.538457 70.05615 5.764004e-17 1.429724e-15 0.20097284 142 Gm5441
+
+Mir153 Mir153 -6.857671 3.517446 69.37600 8.137282e-17 1.975455e-15 0.20158808 140 Mir153
+
+Mir132 Mir132 -2.858294 5.938312 64.52507 9.531204e-16 2.265647e-14 0.09274248 857 Mir132
+
+1110038B12Rik 1110038B12Rik 2.195962 11.253090 62.92015 2.152583e-15 5.012443e-14 0.06712174 37066 1110038B12Rik
+
+Snord91a Snord91a 2.654072 6.557504 62.40549 2.795431e-15 6.379174e-14 0.08637410 1437 Snord91a
+
+[1] # 416 tags significant at adj p= 0.05
+
+
+
+
+
Other images and outputs
+(Click on a thumbnail image to download the corresponding original PDF image)
+
+
+
Other log output
+
+
+
+## Toolfactory generated command line = Rscript - None None
+
+Got TCols=1 5 6 7; CCols=2 3 4 8
+
+[1] # Quantiles for non-zero row counts:
+
+ 0% 10% 20% 30% 40% 50% 60% 70% 80% 90% 100%
+
+ 1.0 1.0 2.0 3.0 4.0 8.0 13.0 24.0 86.6 753.0 2325567.0
+
+[1] Read 3242 contigs. Removed 1494 with no reads. After filtering at count quantile =0.3, there are 1141 contigs
+
+[1] "@@ using genecards substitution for urls"
+
+[1] # urls
+
+[1] 0610005C13Rik 0610007N19Rik 0610008F07Rik 0610009L18Rik 0610012G03Rik
+
+[6] 0610031O16Rik
+
+[1] # Total low count contigs per sample = 170,67,203,86,145,111,155,120
+
+[1] Using samples: liver_X11706Liv_CAAAAG_L003_R1_001_trimmed.fastq_bwa.sam.bam,liver_X11700Liv_ATTCCT_L003_R1_001_trimmed.fastq_bwa.sam.bam,liver_X11698Liv_ACTGAT_L003_R1_001_trimmed.fastq_bwa.sam.bam,liver_X11699Liv_ATGAGC_L003_R1_001_trimmed.fastq_bwa.sam.bam,heart_X11706He_AGTTCC_L001_R1_001_trimmed.fastq_bwa.sam.bam,heart_X11699He_GGCTAC_L001_R1_001_trimmed.fastq_bwa.sam.bam,heart_X11698He_TAGCTT_L001_R1_001_trimmed.fastq_bwa.sam.bam,heart_X11700He_CTTGTA_L001_R1_001_trimmed.fastq_bwa.sam.bam
+
+[1] Using design matrix:
+
+ (Intercept) groupliver
+
+1 1 1
+
+2 1 1
+
+3 1 1
+
+4 1 1
+
+5 1 0
+
+6 1 0
+
+7 1 0
+
+8 1 0
+
+attr(,"assign")
+
+[1] 0 1
+
+attr(,"contrasts")
+
+attr(,"contrasts")$group
+
+[1] contr.treatment
+
+R version 3.0.1 (2013-05-16)
+
+Platform: x86_64-unknown-linux-gnu (64-bit)
+
+locale:
+
+ [1] LC_CTYPE=en_AU.UTF-8 LC_NUMERIC=C LC_TIME=en_AU.UTF-8 LC_COLLATE=en_AU.UTF-8 LC_MONETARY=en_AU.UTF-8 LC_MESSAGES=en_AU.UTF-8 LC_PAPER=C LC_NAME=C LC_ADDRESS=C LC_TELEPHONE=C LC_MEASUREMENT=en_AU.UTF-8 LC_IDENTIFICATION=C
+
+attached base packages:
+
+ [1] parallel splines methods grid stats graphics grDevices utils datasets base
+
+other attached packages:
+
+ [1] RColorBrewer_1.0-5 DESeq2_1.0.18 RcppArmadillo_0.3.900.7 Rcpp_0.10.4 lattice_0.20-15 Biobase_2.20.1 GenomicRanges_1.12.4 IRanges_1.18.2 BiocGenerics_0.6.0 edgeR_3.2.4 limma_3.16.7 gplots_2.11.3 MASS_7.3-28 KernSmooth_2.23-10 caTools_1.14 gdata_2.13.2 gtools_3.0.0 stringr_0.6.2
+
+loaded via a namespace (and not attached):
+
+ [1] annotate_1.38.0 AnnotationDbi_1.22.6 bitops_1.0-5 DBI_0.2-7 genefilter_1.42.0 locfit_1.5-9.1 RSQLite_0.11.4 stats4_3.0.1 survival_2.37-4 XML_3.98-1.1 xtable_1.7-1
+
+
+
+
+
All output files available for downloading
+
+
+
Mir192
+Mir208a -11.0150177152075 3.93955375669227 -23.2524066836307 1.11893807599952e-12 6.38354172357727e-10 17.2086622097974 4638 Mir208a
+Mir122a 10.4261254701779 8.16986409392255 21.7229119192922 2.85968233611017e-12 1.08763251516723e-09 17.760171141852 90428 Mir122a
+Mir149 -7.03046258655617 6.31608073609863 -20.8838348040628 4.91549082404237e-12 1.40214375755809e-09 17.2776088871455 6164 Mir149
+Mir208b -12.4332279840446 4.60762179736006 -19.5924575126382 1.17919871718875e-11 2.69093147262473e-09 15.6836663826186 14756 Mir208b
+Mir10b -5.1309149063532 12.2628671946242 -18.2420234752943 3.12499057505143e-11 4.96397841614262e-09 16.2215027882858 197340 Mir10b
+Mir143hg -2.24922058313374 16.2444825488726 -18.0824813146443 3.52173903971276e-11 4.96397841614262e-09 16.0266951625541 1407364 Mir143hg
+Mir143 -2.25106712131643 16.235859869169 -18.0814805993441 3.524391092512e-11 4.96397841614262e-09 16.0260836456534 1399819 Mir143
+Mir499 -11.5675289490546 3.78745976580796 -17.9420857279689 3.91549568319751e-11 4.96397841614262e-09 14.8217405828874 6527 Mir499
+Mir802 9.15843445824816 2.91576747878654 17.3165224121399 6.33861560587965e-11 7.23236040630868e-09 14.381577240531 1514 Mir802
+Mir3073 8.42054159318439 2.54571889776166 16.7026571721381 1.03306635740721e-10 1.03604453339228e-08 13.9858447292853 904 Mir3073
+Mir148a 2.63821345578617 15.4435819751152 16.5481882215215 1.17118649515038e-10 1.03604453339228e-08 14.8147917664862 1002397 Mir148a
+Mir101b 3.76572195114225 10.8508440499081 16.5385659719288 1.1804188373444e-10 1.03604453339228e-08 14.9000274171241 59019 Mir101b
+Mir490 -8.47437764634465 3.75069567634692 -16.2596504905533 1.48481644820999e-10 1.21012540529114e-08 13.4246171016517 1741 Mir490
+Mir21 2.93853744034991 13.1642916950886 15.3754036511693 3.14833456057776e-10 2.39483315574615e-08 13.8676979022068 229120 Mir21
+Mir181c -3.74256009957124 9.62955774646065 -15.2423608550805 3.53706264458683e-10 2.52236779842098e-08 13.8104046176901 23605 Mir181c
+Mir204 -7.68442507149438 4.77517348536933 -15.0334839919296 4.2542677795722e-10 2.85536443323052e-08 12.8224274879526 2601 Mir204
+Mir23a -3.16576837850821 8.78965917558611 -14.6311785109623 6.11068192724496e-10 3.87349337721472e-08 13.2691736804205 10118 Mir23a
+Mir181d -3.63621106402109 6.37132182424908 -14.3170733565449 8.15750840848868e-10 4.89879847057136e-08 12.9563328312209 2139 Mir181d
+Mir133b -6.49354876170712 1.25448620431148 -13.969968060601 1.12993427319653e-09 6.44627502858619e-08 11.9826837063041 159 Mir133b
+Mir27a -3.10693537246128 9.92557960348829 -13.8382510839158 1.28101104196848e-09 6.96015999469543e-08 12.5130856443239 21886 Mir27a
+Mir194-2 5.26413595786074 6.08976151689046 13.0440120203829 2.79288399641768e-09 1.44849119996026e-07 11.7157527118771 3570 Mir194-2
+Mir195 -3.21659545049586 7.4509349905835 -12.869478368273 3.33278798407795e-09 1.65335264775345e-07 11.5875227405737 3962 Mir195
+Mir27b -1.97637614533106 15.0957731023791 -11.75603589654 1.08219717999805e-08 5.14494575990741e-07 10.1277185662145 625308 Mir27b
+Mir378 -3.09739319841142 7.38320489393809 -11.6841625470748 1.17137125863851e-08 5.34613842442616e-07 10.3296922348831 4075 Mir378
+Snord104 2.33737428989677 10.6109023861403 11.4956750870273 1.44448164322638e-08 6.33905213431269e-07 10.0233949189609 33458 Snord104
+Mir1983 -5.89550024150745 0.993185099223749 -11.4458119994178 1.52754786535047e-08 6.44160462853232e-07 9.74926029381244 101 Mir1983
+Mir322 -3.29661750880005 8.21534154356388 -11.4153616003567 1.58076187203247e-08 6.44160462853232e-07 10.0084716002011 7074 Mir322
+Mir200a 6.19156065085543 1.79813092499896 11.3221723123067 1.75622912046568e-08 6.9098531946598e-07 9.66229453831667 264 Mir200a
+Mir215 -3.04587333807051 5.75442336214621 -11.1481336257529 2.14182153707674e-08 8.08245865886245e-07 9.75326755116029 1182 Mir215
+Dnm3os -3.36334357719079 5.86074322417943 -11.0922610835813 2.28395969947309e-08 8.08245865886245e-07 9.68949616901383 1401 Dnm3os
+Mir182 4.90399541739044 7.1511683493624 11.0744681203078 2.33130367310143e-08 8.08245865886245e-07 9.65884218207857 7189 Mir182
+Mir181a-2 -3.04829832099813 6.94146510070354 -11.0721276255975 2.33760855164295e-08 8.08245865886245e-07 9.64401697815694 2817 Mir181a-2
+Mir1948 7.19552540631629 4.5513492833967 11.0054920626234 2.52493600829575e-08 8.47338819254543e-07 9.34179361673467 2404 Mir1948
+Mir214 -3.28087400431203 5.47844506177362 -10.7682572190636 3.3325545851092e-08 1.0864127947456e-06 9.3185039394887 1048 Mir214
+Mir153 -5.9638030672045 1.43863148956561 -10.7270821099311 3.49874201497232e-08 1.09398957489501e-06 9.03556928822473 140 Mir153
+Cyp3a25 6.3181999278218 1.48889330889732 10.698226339624 3.62044305804168e-08 1.09398957489501e-06 9.02497280953977 226 Cyp3a25
+Gm5441 -5.98217559924296 1.44849534030207 -10.6928905219357 3.64343591989574e-08 1.09398957489501e-06 9.00036161342169 142 Gm5441
+Mir125b-2 -3.07767777869034 7.43160584496732 -10.4466676018996 4.89307304174606e-08 1.43153752323904e-06 8.88425047860251 3837 Mir125b-2
+Mir133a-1 -5.1446707114636 0.590326422018506 -10.3582048674166 5.44722862183524e-08 1.5538219643785e-06 8.57553468686339 60 Mir133a-1
+1110038B12Rik 2.2267024913641 10.8487089345135 10.1946092089644 6.6553123680318e-08 1.85212473461568e-06 8.43930767784171 37066 1110038B12Rik
+Mir132 -2.84755882904953 5.32118389129247 -10.1109518209472 7.38029688527407e-08 2.00498065383279e-06 8.53149092529729 857 Mir132
+Rabggtb 1.93577875106629 9.98741711657765 9.92899544482161 9.26282059254969e-08 2.45787867351144e-06 8.13338404178509 19535 Rabggtb
+Mir504 -5.25612736011945 0.622108812393712 -9.89289391617729 9.69359452558378e-08 2.51372530765707e-06 8.06885345567596 69 Mir504
+Mir150 -2.93853062743745 7.62978695478889 -9.84210172881295 1.0336018288322e-07 2.62075485932786e-06 8.11646444295523 4229 Mir150
+Mir199b -5.75281586680568 2.88051428778536 -9.82392040215114 1.05768314120536e-07 2.62351405242461e-06 7.97938664656761 370 Mir199b
+Mir23b -2.12412853458823 9.81411903779331 -9.80631552439508 1.08156895246613e-07 2.62568122290182e-06 7.97946421769546 16387 Mir23b
+Mir24-2 -2.83397931671342 7.30836912335631 -9.76719188905173 1.13672435494913e-07 2.64694385509584e-06 8.03055035937719 3470 Mir24-2
+Mir3074-2 -2.83397931671342 7.30836912335631 -9.76719188905173 1.13672435494913e-07 2.64694385509584e-06 8.03055035937719 3470 Mir3074-2
+Mir155 -3.90660012470502 3.98990000150695 -9.73217278591154 1.18862734970705e-07 2.71244761203149e-06 8.04651834419983 463 Mir155
+Snord52 2.24297808473649 9.80695706696893 9.65508926768283 1.31194241930095e-07 2.93514960867135e-06 7.78317356265822 18059 Snord52
+Scarna17 2.22135685073443 8.84690751573681 9.60031550237377 1.4077767610154e-07 3.08898708522803e-06 7.75116302071276 9224 Scarna17
+Mir201 -5.13478218238105 0.574435171385817 -9.36375298852343 1.91556946938131e-07 4.12389578219637e-06 7.45101629313275 63 Mir201
+Mir184 -5.19740389169544 2.57741455998865 -9.28503096123923 2.12504578894189e-07 4.42570763295992e-06 7.34294491810118 247 Mir184
+Snord91a 2.64601724328653 5.9737770599439 9.28208610647144 2.1333384733812e-07 4.42570763295992e-06 7.45176303063652 1437 Snord91a
+Mir193 4.93970055277848 3.14663535122407 9.21323530535893 2.33732739541295e-07 4.76230456815389e-06 7.28752724029761 421 Mir193
+Mir470 5.07947201153691 1.71052510073336 8.84181308472679 3.85901653714362e-07 7.72480327873838e-06 6.83971839651152 157 Mir470
+0610031O16Rik 4.84298796174609 0.739739561937192 8.8004727262221 4.08431072700958e-07 8.03482506813436e-06 6.77016207746292 78 0610031O16Rik
+Mir203 1.9396775595845 8.44497102033975 8.70156015908293 4.6818189744087e-07 9.05416177932259e-06 6.53224466632053 6739 Mir203
+1810019D21Rik 5.37088028736873 1.02158093294187 8.63951664435106 5.10331246821015e-07 9.70479921037964e-06 6.58253399607689 117 1810019D21Rik
+D7Ertd143e 4.74135480360802 0.690096187370941 8.59182875086527 5.45451616539556e-07 1.02026277782235e-05 6.49996146777963 73 D7Ertd143e
+Mir181a-1 -3.20886334319296 4.33388500974742 -8.528721562826 5.95908204570219e-07 1.09666332486229e-05 6.48742379588458 506 Mir181a-1
+Mir547 -4.64199116509563 0.384583900671288 -8.48569977551612 6.33121735643368e-07 1.14665381010966e-05 6.34288346197563 42 Mir547
+Mir3102 -4.82802034015575 1.26816340424779 -8.40617041640129 7.08539703084848e-07 1.26319343940595e-05 6.2533959548051 87 Mir3102
+Mir194-1 3.86792676846218 4.28030595336869 8.2361953191898 9.03449017918911e-07 1.5859005068392e-05 6.08687440143381 635 Mir194-1
+Mir199a-2 -3.62193724804755 3.76746624824118 -8.22528846947687 9.17754251311817e-07 1.58660242537391e-05 6.07294487982063 352 Mir199a-2
+Mir375 4.36561952992499 1.70304479419652 8.20239976081094 9.48559026077637e-07 1.61538186381281e-05 5.9804850351652 123 Mir375
+Mir128-1 -2.79500838795041 4.68404652058909 -8.16636754121193 9.99287948408945e-07 1.67674639578619e-05 5.95537435854342 527 Mir128-1
+Mir1a-1 -4.50930254765404 0.235845136893643 -8.15352480043541 1.01805558742015e-06 1.68348032644405e-05 5.89233114702952 42 Mir1a-1
+Mir17hg 1.26324530315481 13.08692945461 8.08792426896809 1.11990826888155e-06 1.80004069127122e-05 5.39248242771111 145451 Mir17hg
+Mir92-1 1.26323093975761 13.0869221993444 8.08780961117952 1.12009543453336e-06 1.80004069127122e-05 5.39230857078851 145450 Mir92-1
+Mir881 4.55329779507755 0.622217688176746 7.98090604480001 1.30985575977083e-06 2.06385233899717e-05 5.68307629847666 64 Mir881
+Mir125b-1 -3.19780406116102 4.7293501044755 -7.96524973476641 1.340381181277e-06 2.06385233899717e-05 5.66721192306587 609 Mir125b-1
+2610203C20Rik -3.20042083590071 4.73071629949528 -7.96367997663051 1.3434829565975e-06 2.06385233899717e-05 5.66487879544241 610 2610203C20Rik
+Scnn1b -4.63822537309801 0.37290502628334 -7.9570799219013 1.35660758479218e-06 2.06385233899717e-05 5.63911983957 45 Scnn1b
+Mir193b -3.19095319216208 3.51292960275358 -7.90681185253976 1.46112366345347e-06 2.19360802631633e-05 5.62073482323402 260 Mir193b
+Mir183 4.30421971951602 3.92737361468754 7.78136892736858 1.76081314682182e-06 2.60215226213659e-05 5.44000583749589 563 Mir183
+5430416N02Rik 3.07746071410873 4.3937689770433 7.77455061595853 1.77885956570249e-06 2.60215226213659e-05 5.40856341816749 564 5430416N02Rik
+Mir125a -2.6112312467571 10.9299667279975 -7.67497504879118 2.06586606398761e-06 2.98373820127831e-05 4.87458713303236 37867 Mir125a
+Mir200b 6.64163006978911 3.12821174098826 7.58298811849222 2.37461716273863e-06 3.38679772835598e-05 5.13195387121669 888 Mir200b
+C430049B03Rik -1.92074554462898 10.5496297843175 -7.55549117760725 2.4760890707944e-06 3.48792299972396e-05 4.70418935748661 25716 C430049B03Rik
+Terc 4.24682289892723 0.87844372666952 7.3826580782883 3.2281439398588e-06 4.49184418948646e-05 4.83681905205792 66 Terc
+Mir871 5.21513327520529 2.43957936484213 7.24439581531717 4.00226877508459e-06 5.50191406309821e-05 4.63418699567578 290 Mir871
+Mir30e -1.90475431278526 13.2693114305891 -7.14894534136424 4.6492913699815e-06 6.28199839913465e-05 3.89856793405104 186796 Mir30e
+Mir24-1 -3.10183666628555 3.10602318965769 -7.13671325687185 4.73984945200915e-06 6.28199839913465e-05 4.48008371426601 189 Mir24-1
+Mir3074-1 -3.10183666628555 3.10602318965769 -7.13671325687185 4.73984945200915e-06 6.28199839913465e-05 4.48008371426601 189 Mir3074-1
+Mir592 4.27837071128313 0.882966518707851 7.13005059451541 4.78995495814825e-06 6.28199839913465e-05 4.46386515426502 70 Mir592
+Serpina4-ps1 6.28609584979245 1.44994282762173 7.10887070838901 4.95297318411398e-06 6.42198000349325e-05 4.43976042902202 295 Serpina4-ps1
+Mirlet7e -1.98704484524714 6.38418687649397 -6.91936550313624 6.69984149789542e-06 8.58934735853783e-05 3.9044291222869 1576 Mirlet7e
+Mir3470b 4.76222273641772 1.545054677666 6.90067154705821 6.90430035193184e-06 8.75311855728247e-05 4.11927719036494 132 Mir3470b
+Mir497 -2.37449282835512 5.72555109896591 -6.88407718002354 7.09129622786183e-06 8.89139450108829e-05 3.89837376299718 963 Mir497
+Mir30d -1.6250750764544 13.1824457426439 -6.86162843142705 7.35278174335401e-06 9.11904779257275e-05 3.42562585807056 161730 Mir30d
+Mir107 1.66807649183652 7.69910580818381 6.8393447582273 7.62239107335082e-06 9.35177227386374e-05 3.6976878474277 3843 Mir107
+Mir301 -1.74763355751926 6.9632575863254 -6.82958967456103 7.7436706688371e-06 9.39949812036503e-05 3.72033936484245 2119 Mir301
+Mir455 2.46320289727146 5.30404932290074 6.81532109954182 7.92473126605604e-06 9.51801934165257e-05 3.83331724079003 895 Mir455
+Mir429 4.86439995826456 3.23263249974835 6.78791698606005 8.28507245768243e-06 9.84715382730797e-05 3.94480735955982 499 Mir429
+1700003L19Rik -3.76057540139707 -0.126261497218445 -6.63064169305684 1.07147990447279e-05 0.000126033542791258 3.68122560260964 23 1700003L19Rik
+Mir99a -2.28512022818228 9.92572736694444 -6.62442810768864 1.08249668655068e-05 0.000126033542791258 3.2109507357583 17575 Mir99a
+Mir145 -1.97697703068737 8.78484403570673 -6.5439327901519 1.23647594606541e-05 0.000141146069525717 3.13555880659816 7539 Mir145
+Mir34b -4.12275476924448 0.708468030075098 -6.54365850253687 1.23703829558034e-05 0.000141146069525717 3.55740492991767 54 Mir34b
+Mir31 2.28911995870681 6.51541747970347 6.52931766820141 1.26681737242473e-05 0.000143112734845209 3.25621845009615 2078 Mir31
+Mir181b-1 -3.60801009779468 -0.132126628141882 -6.46494720684188 1.41005553764556e-05 0.000157732683181724 3.42410398459059 19 Mir181b-1
+Gm6307 -4.1578316997704 0.656018151435715 -6.45273564502753 1.43909587108892e-05 0.000159418290185675 3.41462429299529 52 Gm6307
+Scarna6 1.69929242985022 7.02301841351445 6.42269285853436 1.51324405034754e-05 0.000166020332831399 3.03238527080513 2398 Scarna6
+Snord45b 1.94022355970573 6.80826479898751 6.39728013438808 1.57909283820436e-05 0.000171594755084873 3.00447879542696 2199 Snord45b
+Mir212 -2.84645310030162 3.44913875490104 -6.35557690856707 1.6937466935156e-05 0.000182317450688802 3.21240862806012 232 Mir212
+Mir488 -4.10203604485773 1.24180834532503 -6.29103817686794 1.88870111723183e-05 0.000201402614463693 3.15543310741006 78 Mir488
+Mir1943 -2.71589064856915 3.44876720857909 -6.23580114025192 2.07423167962376e-05 0.000219138735782473 3.00834314558259 215 Mir1943
+Gas5 1.24087717560169 10.5129034284973 6.13133629490868 2.4792457454819e-05 0.000259524715192188 2.31915097100889 24887 Gas5
+Mir1960 -3.55886465849503 0.603332307653829 -6.02805967736536 2.96173517543744e-05 0.000307212712288556 2.72737825973636 36 Mir1960
+Snord72 1.83422077226714 4.99202771858388 6.01300538064759 3.03988327484681e-05 0.000312478091585605 2.48059356064701 603 Snord72
+Mir126 -1.4123938474776 14.7113257499272 -5.9690966101592 3.28038341776394e-05 0.000334189060684701 1.77670178050375 420720 Mir126
+Mir181b-2 -3.5537298874584 2.37784481058975 -5.74465057345259 4.86143755138839e-05 0.000490876127976474 2.24688113349229 154 Mir181b-2
+4930581F22Rik 3.25147651228939 0.329341147921603 5.72231806379132 5.05741508633493e-05 0.000506185141535803 2.2176701707354 33 4930581F22Rik
+Taf1d 1.56967838004803 6.27598295057893 5.62971411199061 5.96235762303463e-05 0.000591569569381088 1.67884064404776 1421 Taf1d
+Mir324 -2.38077905852261 3.65370681185719 -5.61738196066422 6.09504435595697e-05 0.000599521173288526 1.9104544791018 248 Mir324
+Mtmr2 -2.30493988089979 4.77764446891153 -5.57410629776523 6.58554908247018e-05 0.000642231752401579 1.7123130370103 580 Mtmr2
+Mir137 3.41092416262533 0.0324356592441258 5.50287186084007 7.48455682327983e-05 0.000723718587742567 1.84456682895684 29 Mir137
+Snhg1 0.975366701589908 11.1969347059892 5.49575538415102 7.5811401213261e-05 0.000726897552809502 1.12394645028672 37837 Snhg1
+Mir34a -2.05826883405221 3.36051649740781 -5.47484354411999 7.87253643157781e-05 0.000748547005702523 1.67723038143596 180 Mir34a
+Mir298 -3.44904214184284 0.481437816526014 -5.39740371005322 9.05725273791661e-05 0.000854076477187012 1.66441956376117 37 Mir298
+Mir30b -1.37954359870678 9.2115221848988 -5.37206514503938 9.4840390621554e-05 0.000886990866386828 1.00959570224732 10011 Mir30b
+2310001H17Rik 3.60260656982356 0.877139295086231 5.35615735698035 9.76262576906534e-05 0.000902593356272145 1.57720822721783 54 2310001H17Rik
+Pex16 3.10814004056272 0.242483417469106 5.35355087544425 9.80907766676126e-05 0.000902593356272145 1.58678494520955 30 Pex16
+Mir741 3.33919133389387 0.432231427661093 5.2950378042311 0.000109146860855228 0.000996292545886519 1.47796989545021 36 Mir741
+Gm6313 -3.15860344908017 -0.430119305523511 -5.24231069726794 0.000120220067795944 0.00108865950281883 1.40353714409938 15 Gm6313
+Mir328 -1.36488724959 7.2282210636054 -5.23221518519415 0.000122470141866871 0.00110030261315039 0.870852174596449 2362 Mir328
+Snord33 1.25647224562943 7.71222650703403 5.19862342341357 0.000130277220055511 0.00116129928190108 0.778490918357933 3442 Snord33
+Rpph1 1.87063945690961 4.43992987975591 5.19124070458341 0.000132061294296316 0.0011680770293961 1.05386997375291 430 Rpph1
+Mir291a 3.17904342101315 -0.0791999402663102 5.18540568400292 0.000133489301957871 0.00117026083393732 1.2956738181937 24 Mir291a
+Mir186 -1.38629871411117 10.176089899221 -5.181881716386 0.000134359482248719 0.00117026083393732 0.594672202880173 18235 Mir186
+Gm16596 -3.02811906442667 -0.421976649282355 -5.15901843295933 0.000140150118907224 0.00121144913388744 1.25840752971795 12 Gm16596
+Mirlet7i -1.21381140575271 10.6031742297066 -5.15326347701587 0.000141648110216644 0.00121519168238489 0.514620675402163 26242 Mirlet7i
+Sra1 2.97648314190951 -0.188256184051246 5.14486604509538 0.000143863812461334 0.00122498962700285 1.22868620554498 19 Sra1
+Mir700 -3.05275751205424 3.03686027981893 -5.10658051111472 0.00015443097639702 0.00130522773384445 1.06937466394294 177 Mir700
+Mir30c-1 -1.44640830149114 5.51774362365196 -5.09058727395353 0.000159080836478697 0.0013266290585589 0.730639691134108 732 Mir30c-1
+Mir674 -1.94702895981213 4.45877434664642 -5.08988436247691 0.000159288502210841 0.0013266290585589 0.846234772297753 392 Mir674
+Snord45c 1.44139263505882 6.31780757188042 5.0752407566119 0.000163679307853258 0.00135146340163194 0.643628779392595 1427 Snord45c
+Ank1 -1.70157147221109 10.9929711198162 -5.07209350467361 0.000164639275045433 0.00135146340163194 0.337810380148678 33776 Ank1
+Mirlet7b -1.09478453248563 9.30463614623057 -5.06223764308063 0.000167683437276746 0.00136662001380548 0.418305977430397 10012 Mirlet7b
+0610008F07Rik 3.20935973501609 0.342617899865038 5.04843460516125 0.000172045196108449 0.00139222389191305 1.0441746904328 34 0610008F07Rik
+Snord4a 1.57395983217788 5.94089477513251 5.00029990452424 0.000188198499627571 0.00151221470475393 0.535941755206456 1151 Snord4a
+Mir3107 -1.70018651164628 9.99212523723331 -4.97672369154541 0.000196676176463643 0.00155838553711817 0.215189363582583 16873 Mir3107
+Mir486 -1.70018651164628 9.99212523723331 -4.97672369154541 0.000196676176463643 0.00155838553711817 0.215189363582583 16873 Mir486
+Mir100 -1.97076444192024 8.99815411447499 -4.96949043197095 0.000199355724522589 0.00156872332193292 0.262493038912075 8837 Mir100
+6430411K18Rik -3.18910263916585 -0.373872894349982 -4.91488268129579 0.000220845557812913 0.00170486995980212 0.826251830470595 17 6430411K18Rik
+Mir433 -3.18910263916585 -0.373872894349982 -4.91488268129579 0.000220845557812913 0.00170486995980212 0.826251830470595 17 Mir433
+Mir190 -2.07544392773473 3.1544454577673 -4.91417324518583 0.000221140012314386 0.00170486995980212 0.671557118650327 163 Mir190
+Mir668 -2.84374273013661 -0.157703843092941 -4.86996462339487 0.000240314465841743 0.00184026043976798 0.746753746471687 15 Mir668
+0610012G03Rik 2.84115361016785 -0.244188556172649 4.84933497977366 0.000249843031682205 0.00190047266099598 0.705829411755822 17 0610012G03Rik
+Mirlet7d -1.19906882560952 10.0080528514984 -4.83828196963314 0.000255108219097298 0.00192767203966899 -0.0535917366982233 16847 Mirlet7d
+Mir320 -1.40563797109219 6.563348272824 -4.77568906174122 0.000287168062262582 0.00215564973053688 0.0467165593444996 1651 Mir320
+Snord66 1.15430111322029 8.03351541888005 4.75658981303321 0.00029775850741536 0.00222053893438514 -0.0877963597335594 4212 Snord66
+Hgd 4.54425664237216 0.975547692617975 4.73952572490202 0.000307561641064749 0.00225560361403978 0.450492806487889 137 Hgd
+Aqp9 4.93135714830861 0.753510541775538 4.73814880056307 0.000308367063909922 0.00225560361403978 0.445426512401092 161 Aqp9
+Mir221 -1.08377350661343 8.47402248983799 -4.73470478811828 0.000310391167513083 0.00225560361403978 -0.161171563827692 5659 Mir221
+Atf5 3.74327970750113 0.168725495917353 4.73192727585554 0.00031203354916423 0.00225560361403978 0.467422722695712 50 Atf5
+Ahsg 7.43012370228481 2.43819500653074 4.73140267365542 0.000312344759875797 0.00225560361403978 0.392509485594371 1524 Ahsg
+Cyp2d13 3.62058562658928 0.099076105394318 4.71784217799444 0.000320501474638856 0.00229995083372915 0.445950346991055 44 Cyp2d13
+Mir292 3.55331832828793 0.0808135496327816 4.67052458846538 0.000350727059524427 0.00250112234323357 0.360392052911509 41 Mir292
+Proc 4.16579682989808 0.376893953921531 4.63475223165321 0.000375520073648099 0.00266129443498435 0.275862327084029 83 Proc
+2610019E17Rik 1.58277820027238 5.58959301890268 4.63093795449771 0.00037826821496869 0.00266422242764985 -0.140287526130874 892 2610019E17Rik
+Mir379 -2.08294744907303 3.05372097245691 -4.61798165733268 0.000387758909131681 0.00271431236392177 0.128998572399559 153 Mir379
+Mir96 3.092187161072 -0.127577830654966 4.61264491367143 0.000391739223724717 0.00272545398945063 0.269031262574771 24 Mir96
+5033403H07Rik 3.03100334960097 -0.167104636116587 4.55138913141517 0.00044055961680218 0.00304390944849929 0.159657330767462 23 5033403H07Rik
+Mir582 -4.60557103590561 3.35812677089552 -4.5486926708253 0.00044284747454065 0.00304390944849929 0.0591283272554897 566 Mir582
+Mir335 -1.27174458468766 6.43063411797007 -4.54414079104836 0.000446737391037914 0.00305225965972611 -0.393123932477534 1318 Mir335
+Gm5424 4.79310957596335 1.09020146508355 4.53505892344961 0.000454603987554657 0.00308751874880871 0.0640172708933422 181 Gm5424
+Snord96a 1.64486304749729 4.67116544357615 4.51910388563813 0.0004687711663005 0.00316489882099923 -0.255892987917286 487 Snord96a
+Fam120b 3.09294836244015 0.400892342309139 4.51279274228026 0.000474499826623265 0.00318473118927733 0.0711882890790463 39 Fam120b
+1810032O08Rik 1.41990709594509 5.47749401704587 4.44622801412284 0.000539494231805467 0.00359978314906455 -0.491596569959665 801 1810032O08Rik
+D830005E20Rik -2.66421484690988 -0.635454055345691 -4.43818702356919 0.00054794279494766 0.00363489958741442 -0.0273233727843643 9 D830005E20Rik
+Mir3057 -1.76308589999293 3.90842103747244 -4.39033832828025 0.000601107772422842 0.00396453160886973 -0.421971049333088 244 Mir3057
+Dcaf11 3.64616824902598 1.34504089418874 4.36305371925593 0.000633768357283662 0.00415591779115321 -0.228339632338981 105 Dcaf11
+Mir141 2.71262314324362 4.77357067250837 4.34309768158673 0.000658805704226011 0.00429541319155359 -0.576407055554532 835 Mir141
+Clip4 -2.70686636040313 -0.590132795422603 -4.22339289420565 0.000831845216151027 0.00538076227850526 -0.424317219340228 10 Clip4
+Atp2a2 -3.03468731889576 3.9897529348455 -4.22163834350324 0.000834701948549895 0.00538076227850526 -0.712425757555907 394 Atp2a2
+Snord11 1.70196648813426 4.30076703857411 4.20393833047899 0.000864088763598198 0.00553890606328957 -0.81986210274439 399 Snord11
+Mir1a-2 -2.99188005456984 -0.157703843092941 -4.1964183364679 0.00087689254654494 0.0055585244200432 -0.484125725482271 23 Mir1a-2
+Mir1b -2.99188005456984 -0.157703843092941 -4.1964183364679 0.00087689254654494 0.0055585244200432 -0.484125725482271 23 Mir1b
+Snord95 0.986915429703335 7.67764085008967 4.16122119437911 0.000939451338082392 0.00592217666713818 -1.23233286437982 3258 Snord95
+Tardbp 2.97062100907675 0.883541928525332 4.15354257136734 0.000953695266999763 0.00597893571234467 -0.601444869463529 52 Tardbp
+Mir34c -4.34256582352703 3.19074386781529 -4.14603488500754 0.000967835650645262 0.00601077590779499 -0.705590893704782 715 Mir34c
+Nagpa 2.44212396887249 0.350172381597785 4.14525853315587 0.000969310049986221 0.00601077590779499 -0.597611598821245 24 Nagpa
+Bmp1 2.83284622628297 0.517967853857585 4.09387916064743 0.00107217035218767 0.00661268309106014 -0.708641495529353 39 Bmp1
+Crem 2.33712898304139 -0.121515515943567 4.0829392931282 0.00109547464985413 0.00672008911550302 -0.694023102630085 16 Crem
+AI506816 2.42270659752045 -0.452690836228738 4.06592993902701 0.00113274010846169 0.00690883244123217 -0.71823549330855 12 AI506816
+Snhg12 1.2392736392255 8.22309194102909 4.06341770887408 0.0011383527598174 0.00690883244123217 -1.46153826275546 5403 Snhg12
+Snord99 1.60658132000619 7.61494864267921 4.05085172286681 0.00116685579559478 0.00702317443883207 -1.44229619547632 3970 Snord99
+Mir450b -1.85261764183761 3.54483087111489 -4.0485135276699 0.00117223928473074 0.00702317443883207 -1.03659851317493 205 Mir450b
+Mir218-1 -2.37943795492075 -0.788253108012747 -4.04703416313971 0.00117565847310861 0.00702317443883207 -0.747038393026922 7 Mir218-1
+Mir140 -0.901201558594089 9.41159056411459 -4.03552071597731 0.00120261909580773 0.00711569212542235 -1.59661829698077 10795 Mir140
+Mir483 -2.42347249247516 -0.756810762138252 -4.03017784461274 0.0012153437165189 0.00711569212542235 -0.779102255351839 7 Mir483
+Sqrdl 3.73159563362893 0.945260485192632 4.02973478085716 0.00121640506624817 0.00711569212542235 -0.861776345505721 102 Sqrdl
+Mir144 -2.29129119700542 9.41554506116587 -4.02892270273821 0.00121835283652175 0.00711569212542235 -1.60506726133582 13709 Mir144
+Mir210 -1.50896749399836 4.99944311707418 -4.02726966499444 0.00122232748166764 0.00711569212542235 -1.27568646998696 592 Mir210
+Mir136 -1.91584100290298 5.18425364003902 -4.01919516322722 0.00124193308478254 0.0071567962107923 -1.30273093425232 753 Mir136
+Mir3071 -1.91584100290298 5.18425364003902 -4.01919516322722 0.00124193308478254 0.0071567962107923 -1.30273093425232 753 Mir3071
+Snord43 1.12653255459757 7.42275234629614 4.00820447995329 0.00126913582767258 0.00727680391645436 -1.51733899954002 2975 Snord43
+Nlrp5-ps 3.06966395518949 -0.135132312387713 3.98319245863032 0.00133332885542151 0.00760664112017971 -0.902428549559341 34 Nlrp5-ps
+4833418N02Rik 1.82386047796749 3.16360132579728 3.94914311648112 0.00142607040510993 0.00809525538423099 -1.16130756295351 170 4833418N02Rik
+Pknox1 2.58217103686749 -0.386376496641391 3.94009175499237 0.00145181139000837 0.00820057819801758 -0.95836656931183 16 Pknox1
+Mir1843 1.0607275776375 7.37281183848222 3.92128643575477 0.00150681377235572 0.008458947103908 -1.6871582740604 2782 Mir1843
+Scarna3b 1.05890367361984 7.37450114126396 3.91942250502631 0.00151237967501948 0.008458947103908 -1.69099763322655 2784 Scarna3b
+Phyhd1 2.69871613662387 -0.324381809808589 3.91199503566496 0.00153476742516205 0.00850676625406398 -1.01680363882686 20 Phyhd1
+Gm14207 -2.37304409257741 -0.416502509079365 -3.91164184680055 0.00153584035787658 0.00850676625406398 -1.00193629125355 11 Gm14207
+2700038G22Rik -1.20941383309973 5.69714561045198 -3.89423392377302 0.00158967928624185 0.00876243509952633 -1.61494260853442 872 2700038G22Rik
+Mir1249 -1.57997335358757 3.92571996538164 -3.86749708921129 0.00167613304205796 0.00914790116608117 -1.45071018307216 240 Mir1249
+Mir680-2 2.69993600843854 2.33940488575521 3.86630244603638 0.00168010559076576 0.00914790116608117 -1.19260507987069 134 Mir680-2
+4732471J01Rik 2.47123788102083 1.83426864599497 3.86203852417355 0.00169436257731633 0.00914790116608117 -1.16621943210526 78 4732471J01Rik
+0610005C13Rik 3.75552246080227 1.36486301235638 3.86197876879019 0.00169456324819645 0.00914790116608117 -1.18181214765895 126 0610005C13Rik
+Mir297a-3 -2.83038541581836 0.620898493219045 -3.86045228910567 0.00169969767502998 0.00914790116608117 -1.12583690632738 32 Mir297a-3
+D830015G02Rik -2.85288965105576 -0.0430116131169372 -3.8540007067199 0.00172157316996324 0.00918761905215916 -1.135758525707 19 D830015G02Rik
+Mir190b -2.58480150088673 0.118920372323834 -3.85352956525721 0.00172318183800356 0.00918761905215916 -1.12342997930169 19 Mir190b
+Cacnb2 -2.36615720731133 -0.788253108012747 -3.84657108578939 0.00174711947070295 0.00927192240033519 -1.12169301350773 7 Cacnb2
+Mtfr1 2.77427419358368 0.492589466798896 3.83997888411189 0.001770108543009 0.00935043447950588 -1.18729669638225 40 Mtfr1
+Snord1a 1.56162899910724 3.64400301591315 3.83681604346118 0.0017812471515648 0.00936313497745819 -1.45598973323054 230 Snord1a
+Snord68 0.957663081634941 8.79334935483305 3.83464756418373 0.00178892500007527 0.00936313497745819 -1.95644313626433 7303 Snord68
+Mir878 2.41936085459412 -0.447944854953861 3.82652263259005 0.00181799260036803 0.00947182446127819 -1.16702401112308 13 Mir878
+Mir511 1.70981318188926 3.27929603694437 3.81643804724114 0.0018547387918105 0.00959956329857923 -1.44128807747474 183 Mir511
+Gm15787 2.48153800186339 -0.386376496641391 3.81519042194731 0.00185933697544786 0.00959956329857923 -1.19313192146596 14 Gm15787
+Surf1 2.36126838851735 0.0872159088448913 3.80305260835126 0.00190467958178741 0.00978936667936682 -1.23097217655323 20 Surf1
+Mir1968 2.37800084613411 0.673754504632647 3.77926083620018 0.00199683807660974 0.0102052996591412 -1.28734965758831 33 Mir1968
+0610007N19Rik -1.90120438734532 2.49555567542219 -3.77758577340756 0.00200349441161053 0.0102052996591412 -1.41487533930946 104 0610007N19Rik
+Snhg8 1.59039445480745 3.20715500905903 3.75615085858512 0.00209068421652196 0.0106020919602291 -1.55245580151111 164 Snhg8
+Mir99b -1.91682795135645 10.9172256229833 -3.75211079306552 0.0021075435523792 0.0106402973153304 -2.25375326353787 35086 Mir99b
+Mir365-2 2.40700496454038 0.263026808334256 3.74756102414217 0.00212669484901157 0.0106896864437102 -1.33894003797924 25 Mir365-2
+A630019I02Rik -2.46429396746277 -0.331334129436178 -3.72894212518103 0.00220692150206125 0.0110442869905785 -1.34913426897275 12 A630019I02Rik
+Snora24 1.55151202645698 3.18622291582758 3.72443395692917 0.00222680324291416 0.011095120088057 -1.61270421930364 160 Snora24
+Tmem205 3.35434252485109 1.34402776298411 3.71826658220279 0.00225429637910924 0.0111803962803989 -1.43852442151233 106 Tmem205
+Chka 2.66265038819564 -0.367431606769972 3.71621547263374 0.00226351581136911 0.0111803962803989 -1.38147433178837 20 Chka
+Il15ra 3.0322333836799 1.34537734368953 3.69802409752219 0.00234697158113459 0.0115426490261835 -1.46743653610507 78 Il15ra
+Mir340 1.08524047523296 8.40150339094243 3.68614126686871 0.00240316001921397 0.0117592747718197 -2.22640527546981 5906 Mir340
+Mir222 -0.989531454809674 6.83748363675873 -3.68437434098812 0.00241163040894463 0.0117592747718197 -2.12318215364121 1840 Mir222
+Snord16a 2.29129601947442 3.76378890459482 3.66271871458069 0.0025179297139219 0.0122253523556804 -1.78739319047154 368 Snord16a
+Snora16a 1.52372874357926 4.55536943029929 3.65510898252504 0.0025563971250754 0.0123595301682671 -1.93830245300744 464 Snora16a
+Meg3 -2.68467060880573 -0.63693223477029 -3.65193847372806 0.00257259886012651 0.0123853810101449 -1.49159048882037 12 Meg3
+Mir503 -1.62803161355467 2.50957996141068 -3.64484640281096 0.00260921685489431 0.0125088925690521 -1.68081269699905 88 Mir503
+Snord34 1.9527050627559 2.43578559807808 3.64115899694926 0.00262846334208935 0.0125484379636985 -1.64754683241552 110 Snord34
+Mir330 -1.20046349365495 3.89404790732931 -3.62347773804946 0.00272276191759244 0.0129444639498874 -1.93549975651123 231 Mir330
+Snord123 -1.85009039423829 2.46689582455698 -3.62068933774574 0.00273794187669866 0.012962621084287 -1.71578244093404 102 Snord123
+1700123M08Rik -2.53907013725051 -0.265019789848831 -3.61128151512854 0.0027897908425338 0.0131535179807069 -1.57539508080877 14 1700123M08Rik
+U05342 2.83058680402627 0.79675702914225 3.60519476819122 0.00282386325723748 0.0132525688403876 -1.63602002228639 54 U05342
+Mir331 -1.23366463697674 4.50384654608554 -3.60339313514846 0.00283402874413198 0.0132525688403876 -2.05839651689923 359 Mir331
+Snord47 1.75254142711948 3.676071658915 3.56574123782182 0.00305512804060726 0.014228167731971 -1.9866272780716 277 Snord47
+1810026B05Rik 2.40748340219702 -0.486051677644913 3.55958270725964 0.00309291230781102 0.014345581069969 -1.66670102684768 15 1810026B05Rik
+Mir1933 -2.60309478178739 0.220871127749556 -3.55529124527092 0.00311951960536729 0.0144104124280327 -1.68059425943861 26 Mir1933
+Gm9899 -2.07308991765323 -0.941052160679803 -3.54532493149369 0.00318220422627889 0.0146407057346138 -1.68493975204853 5 Gm9899
+Hspa13 2.27524541038784 -0.523818455835255 3.54060461550118 0.00321233452906321 0.0147199746894021 -1.69974419035356 12 Hspa13
+Mir3096b -1.20474634794453 4.70053095823646 -3.5153757202842 0.00337831126227612 0.0153571838655659 -2.25812559332021 435 Mir3096b
+Snord93 -1.20474634794453 4.70053095823646 -3.5153757202842 0.00337831126227612 0.0153571838655659 -2.25812559332021 435 Snord93
+Adhfe1 2.52527478072387 0.179068747865736 3.50530102423767 0.00344697804598443 0.0156071505970962 -1.80634560509756 25 Adhfe1
+Gm10768 3.5358301921593 0.021906952859762 3.48225041539546 0.00360941220951063 0.0162780210713503 -1.87207612241023 59 Gm10768
+Snord85 1.10352244207212 9.7813263715169 3.47953980186612 0.00362901230761682 0.0163019804842157 -2.72788678002978 15092 Snord85
+AF357399 1.79554087095325 2.33898958600026 3.47297259387192 0.00367694357668826 0.0164098488394083 -1.96818697726206 89 AF357399
+Mir551b 2.15397612089142 -0.590132795422603 3.47231349486416 0.00368178904722922 0.0164098488394083 -1.82422890137775 10 Mir551b
+Def8 2.41874321422316 -0.465993593620758 3.46859651584658 0.00370923535603452 0.0164678503550015 -1.83970905317218 16 Def8
+Mir664 -1.01764634401405 5.37432688059702 -3.45211961435443 0.00383339754528852 0.0168755824717367 -2.46240607108039 632 Mir664
+Mir467c 2.31849317866793 0.658275206086465 3.45045370722881 0.00384618107849534 0.0168755824717367 -1.9100187677291 35 Mir467c
+Mir345 -0.912671478268366 6.07047283018279 -3.44931934620133 0.00385491021641726 0.0168755824717367 -2.53238717399997 1042 Mir345
+Tysnd1 2.30243120612363 -0.498012096151827 3.44862877647117 0.0038602340272772 0.0168755824717367 -1.87482817968793 13 Tysnd1
+Szrd1 3.00773623992391 1.76282092941222 3.43919964294803 0.00393366880940514 0.0171175138601232 -1.97326991386 108 Szrd1
+Snord35a 1.64122011441228 2.9111550248254 3.43698444459166 0.00395112336041969 0.0171175138601232 -2.13032503281622 131 Snord35a
+Snora36b -1.01237028448432 5.37669976851797 -3.43578817017266 0.00396058164686462 0.0171175138601232 -2.49502841436006 633 Snora36b
+Mir3471-1 -1.1190522551011 4.8388269488082 -3.42504935436875 0.00404651146785495 0.017401703908276 -2.45454758690256 469 Mir3471-1
+Snord42b 1.04806162755878 6.10341205402338 3.42377413826923 0.00405683894794165 0.017401703908276 -2.57887542149696 1095 Snord42b
+Snord23 2.9296105505117 1.31458313757935 3.40028372003562 0.00425187802628573 0.0181700105917304 -2.02991542506104 83 Snord23
+Wac 2.7504919030552 0.283618002868323 3.39632013594792 0.00428570220488658 0.0182462172230433 -2.02643747960115 36 Wac
+Mir98 -0.933678340542421 7.94963852128455 -3.39430346367777 0.00430301532596754 0.0182518233714831 -2.78058118585178 4140 Mir98
+4930483K19Rik 2.52533407356931 -0.00211602021024845 3.38443072134124 0.00438878944604477 0.0185466991034707 -2.0252331979185 24 4930483K19Rik
+9530036O11Rik -2.18021083734 -0.880373807283523 -3.36944259471363 0.00452229090218708 0.0190403465660349 -2.01615459630653 6 9530036O11Rik
+Airn -3.32728005388875 1.05242623359369 -3.36289553627823 0.00458187540512432 0.0192202935192899 -2.09508526477381 66 Airn
+Mir542 -1.22316159239699 3.81531438686763 -3.32742457590211 0.00491862125207608 0.0205573144638052 -2.50522353523098 225 Mir542
+Mir350 -1.56832295120394 3.2654986223895 -3.31591379494715 0.00503313311490562 0.0209591419128004 -2.43484812644587 172 Mir350
+Mir467d -2.52245592103549 0.453062661337275 -3.31293337335217 0.00506321480472689 0.0210077385170668 -2.14396740548906 27 Mir467d
+Gm10069 5.68607477678649 3.08099524867498 3.3046846231052 0.00514741011835455 0.0212796918298643 -2.27892670543982 1309 Gm10069
+Wwp1 3.00070653341197 1.74135246228108 3.28733760371041 0.00532906211683886 0.0219415999009116 -2.26148023738523 118 Wwp1
+Mir431 -2.52814898361935 0.729842447535775 -3.28575204794379 0.0053459813956647 0.0219415999009116 -2.20212311657876 36 Mir431
+1810058I24Rik 2.62271409770273 0.785774819657178 3.27879786751028 0.00542082417887067 0.0221690336490732 -2.25054020283081 50 1810058I24Rik
+Mir1950 2.90261468429164 1.12507136246027 3.27585207867393 0.00545284200159248 0.0222203311564894 -2.2663579061757 78 Mir1950
+1700045H11Rik 2.17220411664475 -0.157703843092941 3.2269553992009 0.00601270540485873 0.0244145795976648 -2.30225973272088 15 1700045H11Rik
+Mir3098 1.50327989079112 3.77759040172564 3.22488371497116 0.00603765136079478 0.0244289368888895 -2.67812879077923 259 Mir3098
+Mir92b -1.33550563727296 3.82392790661174 -3.21643129376509 0.00614050279704137 0.0247572921958452 -2.71829841094789 237 Mir92b
+Gm16157 2.66162389621631 -0.365224948706732 3.20356821793981 0.00630038071552899 0.0253124450578119 -2.34859094591427 22 Gm16157
+Snord19 0.841113010089355 7.11055248976838 3.19415039125178 0.00642005717801694 0.0257027552284819 -3.11414489267883 2203 Snord19
+Schip1 -2.57567954952992 -0.153384190338395 -3.18549465102036 0.00653204236936578 0.0260045455633494 -2.38778174828683 17 Schip1
+Snord69 0.84304704580235 7.14897332827513 3.18307678347552 0.00656366958087888 0.0260045455633494 -3.13872359988574 2301 Snord69
+Mir3061 -1.52813229940924 2.87430787227175 -3.18306594661466 0.00656381167593746 0.0260045455633494 -2.63327753238114 119 Mir3061
+Mir29a -0.877942320051101 11.0487374837586 -3.17676979444805 0.00664688724206556 0.0262425548207502 -3.41112827127731 33081 Mir29a
+Gm10319 2.14644292502742 -0.590132795422603 3.17164218489659 0.00671531580422408 0.0264212942504127 -2.38832170685348 12 Gm10319
+Mir127 -1.25650791022161 9.78648771687729 -3.16887488380797 0.00675253616433696 0.0264764390498573 -3.34593460449095 14429 Mir127
+B330016D10Rik -1.92161264416092 -0.63693223477029 -3.1657281651115 0.0067951088367248 0.0264822665438203 -2.39563418410943 8 B330016D10Rik
+Eci2 3.49526347553937 0.0311983516108461 3.16533536523053 0.00680044180310197 0.0264822665438203 -2.47536158350563 69 Eci2
+Mir128-2 -2.89379537629014 0.203236815749758 -3.14346309940017 0.00710405107482255 0.0275704839332399 -2.47229052342811 35 Mir128-2
+Snora65 1.80564358716833 2.25630817287283 3.13994836128033 0.00715407873897124 0.0276705214954786 -2.59842313949207 83 Snora65
+Snord38a 1.14948303605283 3.92210478649851 3.12106491021558 0.00742890451562957 0.0286364190957207 -2.90862714087175 255 Snord38a
+Snord49b 1.06413907223879 6.40649794888962 3.10982427775322 0.0075974432295226 0.0291874839221727 -3.22360916919111 1485 Snord49b
+G630025P09Rik 2.04699188377197 -0.244188556172649 3.10780445430196 0.00762812710513572 0.0292070235804022 -2.51605087870259 15 G630025P09Rik
+Mir329 -2.25038749201629 0.143148280966294 -3.10219089596341 0.00771405119681339 0.0294372321590772 -2.52468319230879 18 Mir329
+Gm5105 -2.16408947287434 -0.894252721332116 -3.09357723434137 0.00784776462691287 0.029847664797692 -2.53204083131101 7 Gm5105
+1700001L05Rik 2.36321176153954 -0.504303555595595 3.08655241783997 0.00795851133538617 0.0301683104108825 -2.55344737484833 16 1700001L05Rik
+Snord2 0.691526499495304 8.00175923757187 3.08142494474571 0.008040321980135 0.030265949526277 -3.40026204758547 3954 Snord2
+Mir22 -0.847615802202714 16.7326675324719 -3.08005897908952 0.00806225653232276 0.030265949526277 -3.96615097802407 1751447 Mir22
+Mir22hg -0.847524583315551 16.7327250619969 -3.07996011844832 0.00806384632426661 0.030265949526277 -3.96634849509949 1751491 Mir22hg
+1700012B15Rik 2.2557460290944 -0.13987829366259 3.07437268195085 0.00815420485488848 0.0305047466866484 -2.59032088872728 19 1700012B15Rik
+Mir185 -1.40702024721662 4.08694622913669 -3.05877067430607 0.008411855287644 0.0313657741281105 -3.06664608794292 331 Mir185
+Slc25a44 2.21491041672761 1.66497498687079 3.04421973608031 0.00865939699909311 0.032183622071548 -2.71149512021232 77 Slc25a44
+Mir495 -1.8776791373757 -0.650811148818883 -3.04203753845606 0.00869713645483206 0.0322189373213097 -2.62552265945633 7 Mir495
+Sec16b 3.05043595272399 0.157027195014887 3.02828873074633 0.00893867714364734 0.0330065715886784 -2.71905679017603 57 Sec16b
+Mir152 -0.718432101776587 7.28616446583531 -3.01300789436766 0.00921491113521454 0.0339168180815477 -3.48441058966127 2398 Mir152
+Snora3 2.07140605143005 1.76186432056615 3.0107219189642 0.00925695325975535 0.0339620053677841 -2.78114890188917 69 Snora3
+2010003O02Rik 1.94956844186534 -0.0201000379109987 2.97528778647613 0.00993335310087066 0.0362443709129751 -2.76683258555442 17 2010003O02Rik
+Mir704 1.80973957230357 -0.756810762138252 2.9728569191809 0.00998150161417436 0.0362443709129751 -2.75225460174575 7 Mir704
+D130020L05Rik 2.51176492481985 1.19972413900365 2.97271570851407 0.00998430564726682 0.0362443709129751 -2.82735067383733 52 D130020L05Rik
+Mir3076 -2.06400546664394 -0.027699510367659 -2.97161874120075 0.0100061146692262 0.0362443709129751 -2.75226107651724 17 Mir3076
+Mirlet7c-1 -0.837889959835657 5.12475158025001 -2.96511158812865 0.0101364526370322 0.0366002925913093 -3.39152169935695 536 Mirlet7c-1
+Mir540 -2.19546334412823 0.490670971257216 -2.96107695486126 0.0102181042879641 0.0367787286831769 -2.78918578498352 25 Mir540
+Mir1947 -1.28776936588478 3.27191581050928 -2.95683139992983 0.0103047236916254 0.0369738670822157 -3.13442994008256 146 Mir1947
+9130019P16Rik 2.19950155178161 0.0491090861538386 2.93627487051494 0.0107344511680762 0.0383950118582288 -2.85952778968786 20 9130019P16Rik
+Mir5121 1.92484055344077 0.963995516493567 2.91681375354519 0.0111574945019998 0.0397834413336931 -2.90528656811773 37 Mir5121
+B430319G15Rik -1.98479980231837 -0.986373420602892 -2.90027155266244 0.0115299314828684 0.0408786538511516 -2.88966321680022 6 B430319G15Rik
+Mir351 -0.833417329407842 8.58289887759314 -2.89999295816495 0.0115363072217974 0.0408786538511516 -3.79447142137588 5692 Mir351
+D330050I16Rik 1.78527438588565 -0.392012482832458 2.89505348884379 0.0116499250396066 0.0411534503721088 -2.89805092182303 11 D330050I16Rik
+BC024386 2.76807972012068 -0.350592172752806 2.88853915590151 0.0118014481853742 0.0415600382083702 -2.93769383343029 35 BC024386
+Mir666 -2.07579086945099 -0.498012096151827 -2.87668024285998 0.0120822641583993 0.0424180412453341 -2.935960499869 9 Mir666
+Mir19a 1.09579604803789 3.73141492889975 2.86437745877971 0.0123805124227085 0.0433317934794797 -3.37709843179263 223 Mir19a
+Numb 1.68732685590953 2.04652538144382 2.86121813573409 0.0124582585716259 0.0434705597254591 -3.09454193475081 80 Numb
+Mir743b 1.75236219547595 -0.788253108012747 2.85924586889851 0.0125070353152586 0.043507705166799 -2.96109586080316 7 Mir743b
+Mir466f-3 2.69172899990669 1.87893214035262 2.85764483454932 0.012546768496086 0.0435132609545109 -3.07809643101419 134 Mir466f-3
+Snora64 2.4307644292688 0.761833001151837 2.85484959589604 0.0126164349935154 0.0435532556947262 -3.03394915069077 47 Snora64
+Trmt61b 2.31260437934785 -0.537538901613448 2.85283128922496 0.0126669731509781 0.0435532556947262 -2.98304494636545 18 Trmt61b
+C130080G10Rik -1.86190650840199 -1.04705177399917 -2.85259853175366 0.0126728141022341 0.0435532556947262 -2.97869388313859 5 C130080G10Rik
+Mir146 -0.747535639173072 9.8698371568429 -2.82836188364647 0.0132956711142425 0.045554137729091 -4.01615829841473 13917 Mir146
+Mir449a -1.79604146328396 -1.07849411987367 -2.8268741085019 0.0133348659084281 0.045554137729091 -3.02729704133418 5 Mir449a
+Ncaph2 2.43172128495717 0.531053368370468 2.81514840260429 0.0136477529969634 0.0464838393120456 -3.10990472720523 39 Ncaph2
+Tmem41a 2.13366400352273 -0.61462282166951 2.81019216927593 0.0137821511685655 0.0468018883432536 -3.05559526679725 14 Tmem41a
+Mir337 -2.00512882554678 1.46245475734951 -2.790176090596 0.0143381997019222 0.0484912300051582 -3.15685281038144 50 Mir337
+E430016F16Rik -1.97871005920294 -0.986373420602892 -2.78924386549867 0.0143646237876805 0.0484912300051582 -3.09307014868296 6 E430016F16Rik
+1700003F17Rik -2.01422348895548 0.00986412853889808 -2.78534021594328 0.0144757903878217 0.0487223505383617 -3.09728477834654 16 1700003F17Rik
+5730522E02Rik 1.77943144260577 -0.402623595030772 2.78153548351825 0.0145849474469889 0.0489453677559245 -3.10514832323792 12 5730522E02Rik
+Snord32a 0.731701165103898 7.36041411624865 2.77936808794083 0.0146474880967064 0.0490110965347272 -3.93874361373315 2646 Snord32a
+Ccl25 1.82691173511948 -0.742931848089659 2.76634551467819 0.0150287990280197 0.0501399406168728 -3.13119236947949 8 Ccl25
+Bc1 1.4447966027473 5.60396756501899 2.76417137258444 0.015093394998458 0.0502086405050747 -3.80973281446833 1034 Bc1
+Mir92-2 0.841738777296982 7.67150490176917 2.75570725400377 0.015347458592434 0.0509053786452535 -4.00630959541651 3238 Mir92-2
+Gm16023 2.83755782890821 0.231660734523689 2.74997768567304 0.0155217992534112 0.051334414342441 -3.23123254571433 61 Gm16023
+Mir463 1.7496368661484 -0.788253108012747 2.74746508869923 0.0155988599062727 0.051440170962593 -3.16503205634054 7 Mir463
+1810008I18Rik 2.42034344843247 -0.486051677644913 2.74392263242908 0.0157081389909388 0.0516512581805798 -3.18685172400794 25 1810008I18Rik
+Gm16119 2.15928464558089 0.141491903029062 2.7402336372813 0.0158227303686605 0.0517925809899256 -3.22270297555294 24 Gm16119
+2010308F09Rik -1.83277349898908 -0.650811148818883 -2.73961897562678 0.0158419025113795 0.0517925809899256 -3.18111223859539 7 2010308F09Rik
+Gm8883 2.16409799450603 -0.590132795422603 2.72505563686563 0.0163028203034417 0.0529872269292577 -3.21224705829732 16 Gm8883
+Zfp862 2.16409799450603 -0.590132795422603 2.72505563686563 0.0163028203034417 0.0529872269292577 -3.21224705829732 16 Zfp862
+Snhg7 1.72599658448324 2.92713305382255 2.72369233450925 0.0163466291666071 0.0529872269292577 -3.48946421579912 173 Snhg7
+B830017H08Rik -2.23343112594958 -0.833574367935836 -2.72209538930301 0.016398091528245 0.0530034629850638 -3.21732724703038 8 B830017H08Rik
+1810064F22Rik 2.10429563053184 -0.628239618113655 2.71233407077621 0.0167160942777747 0.0537469782312529 -3.23263196069571 14 1810064F22Rik
+Mir297c -2.59766718982369 -0.523818455835255 -2.71214450340864 0.0167223288975414 0.0537469782312529 -3.25125579861584 16 Mir297c
+Mir3065 -1.15841548117293 4.89782194523564 -2.69932982501886 0.0171490634567944 0.0546270939470388 -3.86797461891443 469 Mir3065
+Mir338 -1.15841548117293 4.89782194523564 -2.69932982501886 0.0171490634567944 0.0546270939470388 -3.86797461891443 469 Mir338
+Snord12 0.862355865323009 7.21183801132978 2.69866680699734 0.017171427527834 0.0546270939470388 -4.08039835847175 2566 Snord12
+Gm16551 1.95751791415313 -0.691386427467094 2.69401162790859 0.0173292489773132 0.0546270939470388 -3.26351851959596 11 Gm16551
+Mir1938 -1.6694250746775 -1.13917247326995 -2.69395153729379 0.0173312953626889 0.0546270939470388 -3.27380411394135 4 Mir1938
+Mir384 -1.6694250746775 -1.13917247326995 -2.69395153729379 0.0173312953626889 0.0546270939470388 -3.27380411394135 4 Mir384
+Sec14l1 -1.6694250746775 -1.13917247326995 -2.69395153729379 0.0173312953626889 0.0546270939470388 -3.27380411394135 4 Sec14l1
+A530013C23Rik 2.10076433042777 -0.628239618113655 2.67776214138051 0.0178912486859939 0.056236679754047 -3.29508901202161 14 A530013C23Rik
+Gm9920 1.6285204207954 -0.848931461409027 2.67099225409632 0.0181305686626977 0.0566766543675016 -3.30261681920118 6 Gm9920
+Mir3096 1.6285204207954 -0.848931461409027 2.67099225409632 0.0181305686626977 0.0566766543675016 -3.30261681920118 6 Mir3096
+Runx2 -2.05940172171601 0.19321552216426 -2.66798439607752 0.0182378909516821 0.0568298554460666 -3.31709929184916 18 Runx2
+Mir1199 -1.80452318263558 -0.286012869513089 -2.66623221676357 0.0183006932250553 0.0568298554460666 -3.30697738722689 11 Mir1199
+2810013P06Rik 1.73280899888147 -0.254570523638594 2.66544441649986 0.0183289980755061 0.0568298554460666 -3.31814833648003 13 2810013P06Rik
+Mir139 -0.71676951546528 5.60987527682552 -2.6551603087927 0.0187024067912338 0.0578304773680157 -4.03578216454232 751 Mir139
+Syce2 2.36455525863438 -0.504303555595595 2.65072370278831 0.0188657609520281 0.0581779276926056 -3.35376683182341 26 Syce2
+Hsf4 1.75853048276747 -0.027699510367659 2.63272367541842 0.0195427890611213 0.060103294659675 -3.38335065718976 17 Hsf4
+9530026P05Rik -2.07695780402641 0.308348068257344 -2.63023447836339 0.0196382434958373 0.0602345049159956 -3.38900744489907 20 9530026P05Rik
+F730035M05Rik 1.78278284441709 0.0460524556882713 2.60073804597223 0.0208042043193282 0.0636396705853981 -3.45006336955945 17 F730035M05Rik
+4931440P22Rik 1.81357503948527 -0.34669122290937 2.59692706678062 0.0209596355730796 0.0639437010397962 -3.44244562957201 12 4931440P22Rik
+Mir300 -1.68375330243594 3.41000156536173 -2.5819475209075 0.0215814969001033 0.0656653012347144 -3.85223959755949 222 Mir300
+Gm9961 1.6141478502722 -0.484133182103234 2.57010065554055 0.0220858578259184 0.0668716722449952 -3.48214581462349 10 Gm9961
+2900060B14Rik -1.19518787351076 3.46457469939205 -2.56923876538494 0.0221229909127292 0.0668716722449952 -3.89704508052604 185 2900060B14Rik
+Mir411 -1.00605950591069 6.99892994877789 -2.56852458872886 0.0221538055290168 0.0668716722449952 -4.310335894974 2196 Mir411
+Mir673 -1.3090170207406 1.82295295242957 -2.56480697753964 0.0223148777778054 0.0671801465553455 -3.62107180274171 51 Mir673
+Gm5088 -1.68701668543175 -1.13917247326995 -2.55941235619776 0.0225506148115993 0.0677111881579862 -3.51525248418991 4 Gm5088
+Tor2a 2.07995668744553 -0.61904848868591 2.55252291882178 0.0228551574897157 0.0684454978891487 -3.51995132920037 16 Tor2a
+Mir1929 -1.69214227634269 -1.13917247326995 -2.5510179798629 0.0229222065165283 0.0684665906684784 -3.53018502209241 4 Mir1929
+Gm12295 -1.69666721026032 -1.13917247326995 -2.54771186173241 0.0230701674123488 0.0687286188446215 -3.53606163444577 4 Gm12295
+Wdr13 -1.72526707110706 -0.147092730894626 -2.53924168587016 0.0234534382441355 0.0696884714493714 -3.52799276824936 12 Wdr13
+St7l 1.62230300798708 0.897522708635819 2.52666370286734 0.0240338880626592 0.0712277046220627 -3.60118587779941 32 St7l
+Snord88c 0.793290174312999 4.47693446317466 2.50505317099491 0.0250634970146661 0.0740866582739222 -4.17079027962479 341 Snord88c
+9330175M20Rik -1.65022439160042 -0.360570136957963 -2.50294066783667 0.0251663831454311 0.0741985611600436 -3.59490203212403 9 9330175M20Rik
+Snora52 1.11047151370588 2.69319347264049 2.50050576985066 0.0252854729408082 0.0742992649502222 -3.88083546486857 105 Snora52
+4933405D12Rik 2.28373557503359 -0.125999379613997 2.49952793100309 0.0253334503629621 0.0742992649502222 -3.64207314883416 26 4933405D12Rik
+Mir188 -1.84047092737597 1.30222680574037 -2.49825793655251 0.0253958924895589 0.0742992649502222 -3.67062190136747 41 Mir188
+Mir205 1.92476770177287 -0.714181147408868 2.49436665703146 0.0255881349007889 0.0746702350941181 -3.61910043615221 13 Mir205
+Mir29b-2 -1.76343390631061 1.19462262736195 -2.491486533954 0.0257313191461785 0.0747071028176607 -3.66952491758492 41 Mir29b-2
+Snord100 0.630343774928686 6.02538660524635 2.49147851197563 0.0257317190248384 0.0747071028176607 -4.3727044437044 1006 Snord100
+Mir103-1 1.66401353804538 -0.178535076769122 2.48869237583317 0.0258709623692558 0.0749123841663655 -3.63209662533681 14 Mir103-1
+Snord67 1.44797500570103 2.44125660341038 2.48744103910754 0.0259337350970328 0.0749123841663655 -3.84438090974652 108 Snord67
+Mir378b -1.87217458287095 -1.04230579272429 -2.48543799390718 0.0260345203956202 0.07501360548334 -3.63953394774132 8 Mir378b
+Stap2 1.82543646576299 0.360783493796099 2.47215410233116 0.0267124555123547 0.0766751025232241 -3.68285167340431 25 Stap2
+Abhd1 1.9251911184693 -0.706743520940286 2.47151360035917 0.0267455659984603 0.0766751025232241 -3.65951891456996 13 Abhd1
+Crebzf 2.18345173240976 1.01056858325673 2.46941691788336 0.0268542277090025 0.0766788467965674 -3.72491986207361 48 Crebzf
+AW495222 3.12693001673928 0.217900170575655 2.46889622052332 0.0268812784562901 0.0766788467965674 -3.7522647303971 101 AW495222
+Lrrc28 2.42525008262091 0.708273211214943 2.46119616740811 0.0272843555867779 0.077634537966368 -3.75212597460025 60 Lrrc28
+Mir3086 -1.56502610075238 0.163979514642475 -2.45070863513763 0.0278426426188866 0.079026008030223 -3.67658416235536 15 Mir3086
+Gm16548 1.56554530187766 -0.880373807283523 2.43719245534725 0.028578244472197 0.0809125978728953 -3.7171315266521 6 Gm16548
+Vsig8 0.720909981822672 5.46827442991139 2.4297652846464 0.0289903098093856 0.081876097753735 -4.42992368125479 711 Vsig8
+Mllt10 1.64313940342435 2.00106077397987 2.42643449288836 0.0291769377903763 0.0821624443172407 -3.88522168534726 76 Mllt10
+Snord37 0.718235154642642 5.26607014192141 2.42421441307507 0.0293019662978149 0.0821624443172407 -4.41840621005442 605 Snord37
+2310044G17Rik 1.83521282323275 0.25478388047673 2.42411236612262 0.0293077255364741 0.0821624443172407 -3.77290246486377 21 2310044G17Rik
+Mir5109 1.91674990639075 5.26141207092908 2.4205606649453 0.0295088463344336 0.0825235138911489 -4.39344655492679 1282 Mir5109
+1700028E10Rik 1.54839823984953 -0.345213043484771 2.41736388881311 0.0296909918731214 0.0828298819736711 -3.7511992998099 11 1700028E10Rik
+Mea1 1.54661886587012 -0.101771470971538 2.4138331460667 0.0298934095831866 0.0831911715473558 -3.76260805956638 13 Mea1
+Snora74a -1.73489546483347 1.01966577101052 -2.40803895916142 0.0302284388032876 0.0839188532227522 -3.80206412811815 36 Snora74a
+Mir191 -0.655767170712639 13.5617906330993 -2.39884764518688 0.0307672305375651 0.0851401619055862 -5.06132700567092 174890 Mir191
+Mir1949 -1.81819327722704 -1.07849411987367 -2.39799614454486 0.0308176046161324 0.0851401619055862 -3.79424293296871 5 Mir1949
+Mir1198 1.58891563084634 1.17557415725746 2.39059542110177 0.0312587378593833 0.086150289607624 -3.8609699445768 43 Mir1198
+Cldn25 1.85104613563129 -0.734239231433024 2.38535835022853 0.0315745192814028 0.0868109072291099 -3.80901008552036 12 Cldn25
+3110045C21Rik 1.65443039841412 0.203826634362574 2.38155453756473 0.0318057752099395 0.0872365132561082 -3.82495974541955 21 3110045C21Rik
+A330009N23Rik -1.65876461460145 -1.13917247326995 -2.36252069958505 0.0329872919163081 0.0902246398210002 -3.86075992930999 6 A330009N23Rik
+4930412C18Rik -1.71539919467515 -1.13917247326995 -2.36022700442918 0.0331324488036802 0.0902246398210002 -3.86472183787187 4 4930412C18Rik
+Gm17769 -1.71539919467515 -1.13917247326995 -2.36022700442918 0.0331324488036802 0.0902246398210002 -3.86472183787187 4 Gm17769
+Fth1 2.86103494155137 3.45595627169968 2.35821583980086 0.033260223411433 0.0903569402677262 -4.19586341531867 625 Fth1
+4833417C18Rik 1.47974694653215 -0.544811535499514 2.35068477635695 0.0337428496416542 0.0914503359646734 -3.86474671238307 9 4833417C18Rik
+Snora61 0.958904821800182 3.29767563160608 2.349125503029 0.0338436003101147 0.0915060378053102 -4.26190631619714 164 Snora61
+Mirlet7f-2 0.650708366569944 9.71888537299185 2.34186730999564 0.0343163384594052 0.0925648751351804 -4.91362837250212 14033 Mirlet7f-2
+Mir484 -0.729527631490827 7.08906245513894 -2.3224356166388 0.0356128817086712 0.095835608560363 -4.76719481541216 2052 Mir484
+A630066F11Rik 1.44515529589515 -0.941052160679803 2.31716732167662 0.0359722924599672 0.0963708221549233 -3.92438209949561 5 A630066F11Rik
+A730017L22Rik 2.05481659238372 -0.239213430165402 2.31696857375682 0.0359859181283499 0.0963708221549233 -3.9446476842384 21 A730017L22Rik
+Ankrd10 1.8458518819756 -0.032400500918623 2.31581421766513 0.0360651543033762 0.0963708221549233 -3.94922969635093 18 Ankrd10
+9330179D12Rik -1.85045093530144 1.28320177813767 -2.31096269706071 0.0363999711565358 0.0970382408635685 -3.9951686511153 40 9330179D12Rik
+Snora62 1.7847261774294 -0.244188556172649 2.29775908931167 0.0373260968205211 0.0992752365319687 -3.96525604386916 17 Snora62
+BC024582 1.59980554588654 -0.452690836228738 2.2959268866433 0.0374563520512198 0.0993899946289343 -3.96118314063755 10 BC024582
+Gm10804 1.52979741848186 -0.355824155683085 2.29375082460336 0.0376116093012649 0.0994728784445405 -3.96360070348265 12 Gm10804
+Mir1195 1.10164801174588 3.09590694872149 2.29304709119496 0.0376619487187042 0.0994728784445405 -4.32472042528613 144 Mir1195
+Gorasp2 1.73210701934952 0.154556788162208 2.28600861467189 0.03816892734941 0.100579090313341 -3.99587343487878 24 Gorasp2
+5730420D15Rik 1.62853621883357 -0.848931461409027 2.27860458389794 0.0387091654979492 0.101767644776867 -3.99077412899541 8 5730420D15Rik
+Mirlet7f-1 -0.614882576643158 5.68980618928649 -2.27248837673306 0.0391608536660756 0.102718469041361 -4.74250560785076 779 Mirlet7f-1
+0610009L18Rik -1.61889807816313 0.265553460945444 -2.26526136567524 0.0397009617671157 0.103777261528111 -3.99536063610116 21 0610009L18Rik
+Snhg3 1.25378785890833 2.38956644178022 2.26464378812804 0.0397474393896485 0.103777261528111 -4.23895965644335 94 Snhg3
+Mir297-2 1.46684984163613 1.40872493183085 2.26345073111919 0.0398373712088629 0.103777261528111 -4.09858373085422 47 Mir297-2
+Etfb 2.40847795385732 0.265851908477543 2.26169079632117 0.0399703828812269 0.103886576007927 -4.07904638296427 53 Etfb
+Mir708 -1.85451172422601 -0.280376883322022 -2.25778324055568 0.0402671991288784 0.104420168650114 -4.0216739515904 16 Mir708
+Rchy1 1.62884124887726 -0.438811922180145 2.25361813300649 0.0405858566094605 0.105007851227652 -4.03354975134699 11 Rchy1
+A730056A06Rik -1.68694694851363 -1.13917247326995 -2.24683042206407 0.0411102355769964 0.105912931059682 -4.05854864097368 6 A730056A06Rik
+4933406I18Rik 1.77699338800155 -0.768738207773087 2.24668779416224 0.0411213220503411 0.105912931059682 -4.04580334564085 11 4933406I18Rik
+Mir134 -1.97599424729025 0.963837048223167 -2.23531953342299 0.0420140490275288 0.107968535901825 -4.10273890592774 40 Mir134
+0610040F04Rik 1.48024531718237 -0.126261497218445 2.21863530367332 0.0433571530862421 0.111169689149219 -4.09406770500723 13 0610040F04Rik
+Hyi 1.7208723887239 -0.798864220211061 2.21727225982332 0.0434686369972673 0.111205638596148 -4.09496822692958 10 Hyi
+Mir19b-2 1.46199574456486 -0.157703843092941 2.21491518136265 0.0436620562951831 0.111450573227749 -4.09725345928943 13 Mir19b-2
+Dnajc5 1.72175747703832 0.127791187493102 2.20641034213855 0.0443666638363991 0.112996346958329 -4.1264696449174 24 Dnajc5
+A330023F24Rik -0.702900153988052 8.59775002327938 -2.19591230206849 0.0452510530552774 0.114819027522333 -5.09936581845105 6103 A330023F24Rik
+Mir5117 -0.936491371721633 3.3130102793186 -2.19552988269139 0.0452835779010078 0.114819027522333 -4.54124266085371 153 Mir5117
+Mir376a -1.47455098239027 -0.835052547360434 -2.1925218271152 0.0455401753877667 0.11521361445109 -4.13790833966528 5 Mir376a
+C530005A16Rik 1.59621643209164 -0.0517042297735718 2.19129548146478 0.0456451756588884 0.115223773068123 -4.14802186280035 15 C530005A16Rik
+Mir29c -0.711325240372844 8.57976498765981 -2.18303555556971 0.0463582979168776 0.116551708876032 -5.12055952980097 6038 Mir29c
+Snora17 1.61038572109377 2.63473165643875 2.18283746936672 0.046375526581699 0.116551708876032 -4.41075432236771 155 Snora17
+Gm12992 1.67719387198237 -0.452690836228738 2.17669534214676 0.04691271219153 0.117642647495683 -4.16199311590905 14 Gm12992
+4933425B07Rik 1.566045114104 -0.880373807283523 2.1731277221669 0.0472273890461801 0.118135825145526 -4.16761720498767 8 4933425B07Rik
+4932412D23Rik -1.44767473084559 -1.24517208658932 -2.17095503836684 0.0474199894098607 0.118135825145526 -4.19574836919915 4 4932412D23Rik
+Smpx -1.44767473084559 -1.24517208658932 -2.17095503836684 0.0474199894098607 0.118135825145526 -4.19574836919915 4 Smpx
+Gm16833 1.43772363562533 0.00422814234783093 2.16359562114833 0.0480778206167906 0.119513710945007 -4.18236836922897 15 Gm16833
+Mir3089 -1.46210970943343 -1.24517208658932 -2.15543507336627 0.0488171825310707 0.120734101973115 -4.22155997764311 4 Mir3089
+Snora7a 1.7230694099937 1.73375263955762 2.15504822558148 0.048852492789084 0.120734101973115 -4.31592015811305 80 Snora7a
+2310015A10Rik 1.51712536676038 -0.90486383353043 2.15439473012054 0.0489121957425213 0.120734101973115 -4.19854386809234 8 2310015A10Rik
+AW112010 1.99789847267928 0.0701015602482627 2.15352220222733 0.0489920150863736 0.120734101973115 -4.22796047652863 34 AW112010
+Pglyrp2 2.13000407982332 -0.625897547790957 2.1382953912996 0.050404600122275 0.123947518835163 -4.23118827095858 27 Pglyrp2
+R74862 1.46156334047426 0.026537555448611 2.13628776933242 0.0505936418662866 0.124144828751469 -4.22999882095606 15 R74862
+Snora28 1.12037820753744 2.12526039705926 2.12930512434667 0.0512562751008916 0.125500879592526 -4.42817337501701 71 Snora28
+Cd40 -1.37088395935442 -1.27661443246381 -2.12752810799839 0.0514261885899383 0.125647283043083 -4.27058401928142 4 Cd40
+Mug-ps1 2.13180518001054 -0.635454055345691 2.12264061264248 0.0518962135703567 0.126524742914053 -4.25630236233275 31 Mug-ps1
+A630072M18Rik 1.38270587147115 0.396971820945472 2.11893446805287 0.0522552789377958 0.127117232913158 -4.26481829202589 20 A630072M18Rik
+9430083A17Rik 1.47463750425962 -0.925695067206612 2.11783696007545 0.0523620503673834 0.127117232913158 -4.25875097666518 7 9430083A17Rik
+Mir1934 -1.57424505068045 -0.635454055345691 -2.11625143263769 0.0525166556449856 0.127221877050804 -4.25830313630768 9 Mir1934
+Snhg4 -1.12748951163344 1.68874582221391 -2.10271220257256 0.0538541790241838 0.130185631920749 -4.40346908432753 47 Snhg4
+Mir669e 1.4372851263053 -0.148570910319225 2.09754754034625 0.0543726361448265 0.131161052518493 -4.29239386401532 13 Mir669e
+9430008C03Rik 1.75693578729127 0.363840124261666 2.09398906309311 0.054732534541466 0.131750679138845 -4.32757583432609 26 9430008C03Rik
+C030037D09Rik 1.44249836924774 -0.941052160679803 2.08964460798292 0.0551749074500188 0.132204324416187 -4.30482301369224 7 C030037D09Rik
+Wdr73 1.44249836924774 -0.941052160679803 2.08964460798292 0.0551749074500188 0.132204324416187 -4.30482301369224 7 Wdr73
+A230108P19Rik 1.49352479961928 0.250614055858426 2.08783829894219 0.0553598038831607 0.132204324416187 -4.31611624705347 21 A230108P19Rik
+B230206H07Rik 1.44241701736279 -0.941052160679803 2.08759786205388 0.0553844584320223 0.132204324416187 -4.3081590960531 7 B230206H07Rik
+Snord55 0.601021636432394 6.97866331241363 2.08546096371218 0.0556040229210925 0.132208091094402 -5.17041448286456 2070 Snord55
+Ralgps2 1.88483656314977 0.227262055965901 2.08532736079326 0.0556177771475135 0.132208091094402 -4.34269584383277 30 Ralgps2
+Mir33 0.994045785258037 2.79490734914157 2.08206634259786 0.055954469010935 0.132731910897041 -4.63235497043256 118 Mir33
+Mir26a-1 -0.807612985022876 4.30478785875254 -2.07928199044436 0.0562434329588863 0.13314057470143 -4.90515725875701 302 Mir26a-1
+Gm16845 1.58909272532801 0.693110936601907 2.07661019420121 0.0565220086427535 0.133523005924186 -4.35651524620671 30 Gm16845
+Gm15417 1.5342975077552 0.98095079124996 2.07236996254055 0.0569667294167582 0.134295533604382 -4.38415298913751 35 Gm15417
+Tmem161b 1.62214843774913 -0.848931461409027 2.06567840236373 0.0576751098770028 0.135602143587659 -4.3444683065412 8 Tmem161b
+0610039K10Rik 1.59784774087558 0.19965680974427 2.0648940719261 0.0577586693984243 0.135602143587659 -4.35652602439924 21 0610039K10Rik
+E230016K23Rik -1.72852657300674 -1.13917247326995 -2.05875394572702 0.0584166748798269 0.136730583937275 -4.37016708474507 6 E230016K23Rik
+2900056M20Rik -1.65506739394547 -0.558690449548107 -2.05452050389929 0.0588743595154887 0.136730583937275 -4.36084200194152 10 2900056M20Rik
+Mir671 0.562605162336286 5.98852427457086 2.05429817680062 0.0588984865622872 0.136730583937275 -5.14108074312137 973 Mir671
+4931408D14Rik 1.96514847475323 -0.696132408741971 2.05392305419837 0.0589392156613288 0.136730583937275 -4.36610698383729 22 4931408D14Rik
+Gm16998 1.69004828050554 0.625421285257375 2.05268667282661 0.0590736396779562 0.136730583937275 -4.40968404758219 28 Gm16998
+Gm16880 1.44362454501385 -0.941052160679803 2.05264516314336 0.0590781576521265 0.136730583937275 -4.36487132437809 7 Gm16880
+Gm20605 1.44362454501385 -0.941052160679803 2.05264516314336 0.0590781576521265 0.136730583937275 -4.36487132437809 7 Gm20605
+Angel2 2.00212254672889 -0.0888847843510248 2.04370859875966 0.0600582524306836 0.13871754255751 -4.40649208108809 28 Angel2
+Mir3082 -0.840503124788145 2.98078155227528 -2.04091866162716 0.0603672767363008 0.139149621729534 -4.74512204880153 112 Mir3082
+4930556M19Rik 1.91670992783053 -0.130687164234845 2.03879415031149 0.0606035740806922 0.139412657310624 -4.40877400780406 23 4930556M19Rik
+Rian -1.1485219400328 2.35394460295566 -2.03597388605946 0.0609185674267399 0.139771726308962 -4.63934157315238 88 Rian
+Mir410 -0.901221750135118 3.70006848443484 -2.03462058748079 0.0610702490918199 0.139771726308962 -4.88099717429878 208 Mir410
+3110039I08Rik -1.63610179345525 -1.18449373319304 -2.03411361106907 0.0611271616373111 0.139771726308962 -4.41449053166305 5 3110039I08Rik
+Jpx 1.4439778868564 -0.386376496641391 2.0256963387538 0.0620792090771524 0.141664755114062 -4.40640628270017 12 Jpx
+Ranbp3 1.65127100064997 0.13253716876798 2.01854426538914 0.0628988113300898 0.143248590274716 -4.43559297253071 21 Ranbp3
+Ano4 -1.60469225892927 -0.386376496641391 -2.01415852435434 0.0634062900341383 0.144116687109466 -4.41831749461231 12 Ano4
+Raver1-fdx1l 1.84484701704264 0.152704788521028 2.00550228504778 0.0644189220532073 0.146127216824472 -4.45962561575273 32 Raver1-fdx1l
+Mir1191 1.82343613876431 0.355147507605031 2.00159544245338 0.064880780262737 0.14678508924003 -4.47205950977787 34 Mir1191
+Snord42a -1.13379631100394 4.75607203025783 -2.00076940150347 0.0649788196577846 0.14678508924003 -5.09261777286222 438 Snord42a
+Elmo1 -1.44814767972568 -0.848931461409027 -1.99979301527205 0.0650948774368582 0.14678508924003 -4.45311869203765 6 Elmo1
+B430010I23Rik 1.34949047728334 -0.986373420602892 1.99444973304055 0.0657333644405924 0.147932482892931 -4.45809589212282 6 B430010I23Rik
+Zfp809 1.61960355427207 -0.452690836228738 1.9814089454698 0.0673157207393185 0.151195349140871 -4.47945908882588 14 Zfp809
+2310050B05Rik -1.59274071576353 -0.590132795422603 -1.97545789269397 0.0680492897692784 0.152490055886233 -4.48612649748884 10 2310050B05Rik
+Gm19705 -1.53197912631465 -1.24517208658932 -1.97349298532553 0.0682930925134662 0.152490055886233 -4.5170833713595 4 Gm19705
+Mir701 -1.53197912631465 -1.24517208658932 -1.97349298532553 0.0682930925134662 0.152490055886233 -4.5170833713595 4 Mir701
+F630028O10Rik -0.622888913014848 5.94290954470824 -1.96287969360653 0.0696237734116029 0.154761005415237 -5.29318401111469 928 F630028O10Rik
+Mir223 -0.622888913014848 5.94290954470824 -1.96287969360653 0.0696237734116029 0.154761005415237 -5.29318401111469 928 Mir223
+Snord71 0.746584913495821 4.40398042673262 1.96214265492746 0.0697170523956459 0.154761005415237 -5.10586352740556 341 Snord71
+Mir3087 -1.55280633805545 -0.590132795422603 -1.94082835991025 0.0724641808981051 0.160546855154831 -4.54065638515475 8 Mir3087
+Gm12718 1.35418552228114 -0.986373420602892 1.93287179314716 0.073514592902694 0.162558431205376 -4.55523156925391 6 Gm12718
+AF357359 -1.68799855890395 1.29585702757533 -1.92491777610303 0.0745784347261457 0.163934632876851 -4.62972173041495 55 AF357359
+Gm10125 -1.45199246964296 -0.848931461409028 -1.92479193749794 0.0745953769075101 0.163934632876851 -4.57142675996109 6 Gm10125
+Tmem179b 1.72738705406917 -0.803788399998572 1.92472040076264 0.0746050097519669 0.163934632876851 -4.56937203477109 16 Tmem179b
+5430405H02Rik 1.78645846006788 -0.165684653346019 1.92319520065518 0.0748106549472968 0.163934632876851 -4.58774074751784 20 5430405H02Rik
+Snora20 1.38262094231094 0.0963488416186067 1.92286428347317 0.0748553406913579 0.163934632876851 -4.56861037921303 18 Snora20
+4930519F09Rik -1.5565120089996 -1.23129317254072 -1.9216903287951 0.0750140617025739 0.163967518012714 -4.59735520927714 5 4930519F09Rik
+Snord15a 1.10276132756029 1.79014108710226 1.91104926615851 0.0764666941361036 0.166823131948937 -4.72655247154268 57 Snord15a
+Dmr 1.68073345913718 -0.8263599307038 1.89430363868892 0.0788041640078884 0.171285514017207 -4.61631543051433 15 Dmr
+A930005H10Rik 1.49847756821754 -0.371019403168199 1.89424576390839 0.0788123530754021 0.171285514017207 -4.61401782584198 14 A930005H10Rik
+C920021L13Rik 1.45659708523928 0.785774819657178 1.89280562125827 0.0790163750358231 0.171402440904704 -4.64971051817534 32 C920021L13Rik
+4931403E22Rik 1.70378545689415 -0.814059467696176 1.88880372983809 0.079585814935806 0.172310085088719 -4.62498282958674 16 4931403E22Rik
+Mir1964 -0.871113074799274 2.86663339631991 -1.88648279477582 0.0799177575555235 0.172701063202372 -4.9744960348716 105 Mir1964
+2410004N09Rik 2.12780696213311 -0.132941404588628 1.87600039224749 0.0814325355366182 0.175611886412351 -4.66535335652261 50 2410004N09Rik
+4930545L23Rik 1.35692949813202 -0.986373420602892 1.87504023129734 0.0815725677463155 0.175611886412351 -4.6448850582387 6 4930545L23Rik
+C330022C24Rik 1.66684006383984 -0.832108206363072 1.87245175628895 0.0819511559395892 0.176094668412564 -4.64990032998496 15 C330022C24Rik
+Gm7854 1.41521331892746 0.409161384184755 1.87132675965834 0.0821161885893659 0.176117615000877 -4.66097795086114 23 Gm7854
+Zfp410 1.71265563446791 -0.233577443974335 1.86771686993171 0.0826477630092813 0.176925136198105 -4.66576692182148 20 Zfp410
+Srsf3 1.22390265356443 1.85404652627685 1.85691167526583 0.0842573902310767 0.180033112834567 -4.81976844441289 57 Srsf3
+Mir466n 1.94888590100719 1.13742198871721 1.85224203398279 0.084961673426306 0.181198634354047 -4.7515811957887 64 Mir466n
+Ldha 1.23623349077625 1.31382141784026 1.85067176230469 0.0851996867355077 0.181367243591818 -4.75855841349533 43 Ldha
+Jmjd4 1.44086756566094 -0.101771470971538 1.84911253075739 0.0854366173626727 0.181532924414915 -4.69022441726304 15 Jmjd4
+Snord90 1.29002743641748 2.8519744150179 1.84711128368238 0.0857415782389845 0.181842269090486 -5.00704775229682 171 Snord90
+Apol7d 1.22452963991045 -1.04705177399917 1.84402849240442 0.0862132574777033 0.182165419966777 -4.69431475678792 5 Apol7d
+Gm13944 1.22452963991045 -1.04705177399917 1.84402849240442 0.0862132574777033 0.182165419966777 -4.69431475678792 5 Gm13944
+Snora68 0.821345299486193 3.6276738274756 1.84196855216361 0.0865297291862233 0.182496157119188 -5.16790668162727 213 Snora68
+Mir3470a 1.39115943125415 1.51311326753652 1.83385231031511 0.0877867742768492 0.184805736992408 -4.80714219046788 61 Mir3470a
+1700042O10Rik 1.25969390520503 -1.03317285995058 1.82371980602793 0.0893789810710051 0.186983832297381 -4.72463210359103 6 1700042O10Rik
+Cox18 1.25969390520503 -1.03317285995058 1.82371980602793 0.0893789810710051 0.186983832297381 -4.72463210359103 6 Cox18
+2010310C07Rik 1.30127564765566 -0.600743907620917 1.82236178655336 0.0895943251318701 0.186983832297381 -4.72220804437159 9 2010310C07Rik
+9530080O11Rik 1.2333343214217 -1.04705177399917 1.82206906601016 0.0896408030382712 0.186983832297381 -4.72761567183742 5 9530080O11Rik
+Gm10658 1.2333343214217 -1.04705177399917 1.82206906601016 0.0896408030382712 0.186983832297381 -4.72761567183742 5 Gm10658
+AV039307 1.68466781700848 -0.822165860739921 1.8179655824626 0.0902946176139629 0.188003939229072 -4.7329903325485 18 AV039307
+Mir653 1.31080939375484 -0.0354571313841903 1.81352557566678 0.0910068355861608 0.18914171111805 -4.73339615516883 15 Mir653
+Snord15b 0.765111056122759 3.75912830759914 1.811253812561 0.0913731790974714 0.189557813364027 -5.24290697168161 219 Snord15b
+A330032B11Rik 1.15351830091647 -0.544811535499514 1.805581783419 0.092293585640648 0.191024884842792 -4.74543310731249 9 A330032B11Rik
+Gpr137b-ps -1.34164266279755 -0.941052160679803 -1.80483613693327 0.0924151940694311 0.191024884842792 -4.76257477080841 5 Gpr137b-ps
+Gm3230 1.32839510964763 -0.996984532801206 1.80296443093399 0.0927210811440096 0.191159424553245 -4.75462931995263 7 Gm3230
+BC090627 -1.21125462055415 1.58389205620882 -1.80195893201754 0.0928857782098881 0.191159424553245 -4.85973163462932 47 BC090627
+Mir1981 0.697255970236885 4.21228670526814 1.80136677676051 0.0929828927493876 0.191159424553245 -5.33355766780014 295 Mir1981
+2700069I18Rik 1.2258276117016 -1.04705177399917 1.79737646930347 0.0936396672658505 0.192163417896287 -4.7647729602822 5 2700069I18Rik
+1700018L02Rik 1.60638305633868 -0.05968504002665 1.79496471819782 0.0940386190778224 0.192635663137873 -4.77706326738907 20 1700018L02Rik
+Rnu12 1.34545573987153 3.12465170168855 1.79074555187797 0.0947401853209974 0.193675928813183 -5.15435248901701 212 Rnu12
+Aes 1.97580787988901 1.50102830623892 1.7898725456979 0.0948859283142588 0.193675928813183 -4.87690265891261 113 Aes
+AW011738 1.35994322320792 -0.986373420602892 1.78331122652731 0.0959876815075987 0.195574901071732 -4.78377188602086 6 AW011738
+Mir1247 0.717962491463309 4.29587920045115 1.77899645447695 0.09671837092938 0.196712408610379 -5.37990996340849 300 Mir1247
+Snora26 1.32536884557828 -0.188256184051246 1.77664788038335 0.0971181605178584 0.197174058987325 -4.79082437782362 13 Snora26
+C130046K22Rik -1.66206124112149 -0.401145415606174 -1.77343531333303 0.0976673947466025 0.197936940330148 -4.79605188690242 13 C130046K22Rik
+4930546K05Rik 1.23872623697392 -1.04705177399917 1.76682617714789 0.0988059745301037 0.199889391735547 -4.81031354370822 5 4930546K05Rik
+Mir199a-1 1.28133340693594 0.249147894285663 1.75988001617421 0.100015250730246 0.201977701032231 -4.81578597695043 18 Mir199a-1
+Mir434 -0.892989649406754 5.12926720938992 -1.7580843415124 0.100329984081606 0.202255321266984 -5.5313213323858 623 Mir434
+Snord53 0.741893342123238 4.09583299151738 1.75305135186545 0.101216797040749 0.203683184168421 -5.3852498459864 290 Snord53
+Mir466g 1.83795214574926 0.185777895695677 1.74292337320769 0.103022330922592 0.206606620810476 -4.86892478985408 38 Mir466g
+D930015M05Rik 1.30968823250333 0.15849335658765 1.7428712395644 0.103031697845014 0.206606620810476 -4.83950381088453 20 D930015M05Rik
+Mir532 0.395164755537383 7.64371024412024 1.7408125217348 0.103402190719686 0.206985788791511 -5.7782897714965 3010 Mir532
+Mir103-2 0.773766228848679 2.45632927480254 1.73913662142218 0.103704656419595 0.207227693475933 -5.11879080206363 81 Mir103-2
+1810014B01Rik 1.26181707046536 -1.03317285995058 1.73762861899304 0.103977485505656 0.207409634548871 -4.85288674502469 6 1810014B01Rik
+Snora69 1.22315416187213 0.909823171643444 1.73588809106924 0.104293168525467 0.207676274498356 -4.89225702628115 33 Snora69
+Zc3h14 1.41408821776149 0.00675479495901958 1.72847661834252 0.105646860853607 0.21000534535534 -4.86420908405344 19 Zc3h14
+Nkx6-2 -1.27800503999609 -0.941052160679803 -1.7146791107628 0.108208119548433 0.214722546790891 -4.8960301602504 5 Nkx6-2
+Mir26b 0.351712467695003 11.5635032907349 1.7045779906641 0.110117579874109 0.21763806583767 -6.09597193580631 46666 Mir26b
+Mir299 -0.955766682393671 1.55229988219809 -1.70455586992184 0.110121793629752 0.21763806583767 -5.00394219885035 43 Mir299
+Mir3068 -0.644710617273588 4.67886513002661 -1.70302081836154 0.110414548820487 0.21763806583767 -5.55943820497418 431 Mir3068
+4930512B01Rik 1.20898643105347 -0.682253494693378 1.70288569810342 0.110440350674856 0.21763806583767 -4.89782103905022 9 4930512B01Rik
+Fam187b 1.23742378935899 -1.04705177399917 1.69414248393857 0.112121161065231 0.220569387543842 -4.9166784968792 5 Fam187b
+Scarna13 1.31946224597966 -0.590132795422603 1.68885863838395 0.113147737124684 0.221824000101829 -4.91936341824324 10 Scarna13
+Snhg10 1.31946224597966 -0.590132795422603 1.68885863838395 0.113147737124684 0.221824000101829 -4.91936341824324 10 Snhg10
+Gm10791 1.38935319993587 -0.966858520363231 1.68575319044044 0.113754902225617 0.222389287455916 -4.92671603809347 10 Gm10791
+H2-K2 1.16076121091899 -1.07849411987367 1.68539104137817 0.113825892966043 0.222389287455916 -4.93053846380363 5 H2-K2
+Mir676 -0.437089730569779 6.48681209189413 -1.6806647861103 0.114755912374217 0.223823070117918 -5.77991725097014 1363 Mir676
+Rcbtb2 1.34162849838235 0.642696874272247 1.67798906730309 0.115285364113241 0.22447201442527 -4.95274844960655 29 Rcbtb2
+5730422E09Rik 1.18020228563473 -0.696132408741971 1.67428783670958 0.116021244081938 0.224957555323422 -4.93882350178396 8 5730422E09Rik
+Ythdf3 1.18280803863615 1.44825173729247 1.6741256859047 0.116053576278149 0.224957555323422 -5.03651124662328 52 Ythdf3
+C730027H18Rik 1.17258184372084 -1.07849411987367 1.67277419424211 0.116323363401244 0.224957555323422 -4.94864972108029 5 C730027H18Rik
+Gm8615 1.17258184372084 -1.07849411987367 1.67277419424211 0.116323363401244 0.224957555323422 -4.94864972108029 5 Gm8615
+2900009J06Rik 1.34828416289482 -0.986373420602892 1.66877503516158 0.117124882491955 0.226124350124061 -4.9510598544989 10 2900009J06Rik
+Rnf44 2.04490507739992 1.01150037846895 1.66529647991714 0.117825963606828 0.227093622424646 -5.02208296723603 88 Rnf44
+A630010A05Rik -1.25675269332335 0.631280460684989 -1.66260430434796 0.118371056366922 0.227453417799216 -4.9530858854327 24 A630010A05Rik
+Rad51d 1.39060859991726 2.02739737762503 1.66240581191988 0.118411332316156 0.227453417799216 -5.13161638361473 92 Rad51d
+Gm12359 1.48198839903639 0.110062763084683 1.65776269040705 0.119356866775459 0.228884344522352 -4.96622809648743 26 Gm12359
+4933417D19Rik 1.18269745295452 -1.07849411987367 1.65430499284386 0.120065250928896 0.229856461929313 -4.97500052644218 5 4933417D19Rik
+Gm9895 1.21903665624816 -0.63693223477029 1.65194097135226 0.120551668835456 0.230401095713995 -4.97151843176298 8 Gm9895
+1110020A21Rik 1.25194593270892 -0.49237610996076 1.63876864711163 0.123293382787791 0.235247073178712 -4.9892549623361 12 1110020A21Rik
+Alg11 1.32531249978621 -0.590132795422603 1.6361767652414 0.123839170710122 0.235510431606847 -4.99444823996257 12 Alg11
+Vaultrc5 -0.448072317249509 7.10631262637587 -1.63615281653852 0.123844223456712 0.235510431606847 -5.89478683307987 2022 Vaultrc5
+Mir3060 -1.21202833172584 0.27171942499089 -1.6351645637142 0.124052882574934 0.235514707184691 -4.96812309442586 19 Mir3060
+Mir1955 1.13186286307835 -0.682253494693378 1.63345540817796 0.124414470052149 0.235669705476309 -4.9969826223679 7 Mir1955
+Gm14005 -1.44880310133897 0.48022170504698 -1.63282712337373 0.124547618231564 0.235669705476309 -4.99064879469161 26 Gm14005
+C730036E19Rik 1.2943846006491 -1.01217978028632 1.63063554865266 0.125013028232036 0.236158717239657 -5.00596783361666 9 C730036E19Rik
+4930405P13Rik 1.34966504178449 -0.986373420602892 1.62725241064407 0.125734431753086 0.236979623633452 -5.00991537352707 10 4930405P13Rik
+Dancr 1.3062030182448 1.18459288047694 1.62665135682264 0.125862972762377 0.236979623633452 -5.07677615617175 48 Dancr
+Ankrd11 1.37844840409545 1.82869495288249 1.62469304300553 0.126282563660683 0.237377932680131 -5.15746897731049 86 Ankrd11
+2610020C07Rik 1.50920105232855 -0.317940522228579 1.6135231103667 0.128698986652833 0.241522275938952 -5.03116671787619 19 2610020C07Rik
+1600002D24Rik -1.25321204977434 -0.756810762138252 -1.61125552509827 0.12919437339977 0.242053826024856 -5.03110633443407 7 1600002D24Rik
+BC031361 1.03166169729911 -1.13917247326995 1.608779945121 0.129737072495046 0.242672130683356 -5.043580985531 4 BC031361
+5730408K05Rik 1.05171391832391 -1.13917247326995 1.60382914837461 0.130828274941307 0.244312703286467 -5.05048396234822 4 5730408K05Rik
+4833422C13Rik 1.56072686239259 0.473647969476496 1.59330634063312 0.133173818859074 0.248286482546083 -5.0792948158275 34 4833422C13Rik
+Mir15b -0.423479234767332 6.16430836474156 -1.59205186812547 0.133455834392276 0.248406373640436 -5.88344797905857 1064 Mir15b
+Snord17 0.588180610794611 6.40434740068647 1.5909226382288 0.133710132153462 0.248415310064625 -5.90270306066359 1360 Snord17
+2700089E24Rik 1.9346637528719 0.708144926037837 1.59009813142159 0.13389606984202 0.248415310064625 -5.10719912908875 70 2700089E24Rik
+1300002E11Rik 1.66663408255978 -0.437333742755547 1.58582291431296 0.134863747546901 0.249804441478919 -5.0690582710292 28 1300002E11Rik
+4930474G06Rik -1.090892671974 -1.03317285995058 -1.58193904835456 0.135748030192849 0.250441466610603 -5.09374604062072 4 4930474G06Rik
+A430093F15Rik -1.090892671974 -1.03317285995058 -1.58193904835456 0.135748030192849 0.250441466610603 -5.09374604062072 4 A430093F15Rik
+Rreb1 1.35338804346774 2.10846654001091 1.58142192959551 0.135866141833447 0.250441466610603 -5.26419259030567 113 Rreb1
+Mir485 -1.2897278302183 -0.360570136957963 -1.57792310950414 0.136667596032013 0.250873719680857 -5.05792690495308 13 Mir485
+Adam17 1.1761458064096 0.445349711334128 1.57783328945761 0.136688223694767 0.250873719680857 -5.07292679688905 22 Adam17
+Mir154 -1.41177845571614 0.000731195765182737 -1.57751972062112 0.136760257354508 0.250873719680857 -5.05355498603271 18 Mir154
+1700034P13Rik 1.03573302470771 -1.13917247326995 1.5706655582452 0.138342934232158 0.251258367802273 -5.09634899411597 4 1700034P13Rik
+Fam120aos 1.03573302470771 -1.13917247326995 1.5706655582452 0.138342934232158 0.251258367802273 -5.09634899411597 4 Fam120aos
+1700102H20Rik -1.01261850877746 -1.42941348513087 -1.56975595848976 0.138554138577694 0.251258367802273 -5.13526440107113 4 1700102H20Rik
+9230112J17Rik -1.01261850877746 -1.42941348513087 -1.56975595848976 0.138554138577694 0.251258367802273 -5.13526440107113 4 9230112J17Rik
+Mir3100 -1.01261850877746 -1.42941348513087 -1.56975595848976 0.138554138577694 0.251258367802273 -5.13526440107113 4 Mir3100
+Mir294 1.03626141233244 -1.13917247326995 1.56969188750367 0.138569025899642 0.251258367802273 -5.09768561064634 4 Mir294
+Snora70 1.03626141233244 -1.13917247326995 1.56969188750367 0.138569025899642 0.251258367802273 -5.09768561064634 4 Snora70
+Mir129-1 1.05464886354904 -1.13917247326995 1.56899253420323 0.138731614123954 0.251258367802273 -5.09864530153619 4 Mir129-1
+Gm10516 1.05631363335724 -1.13917247326995 1.56670193467872 0.139265281483992 0.251825176185792 -5.1017865162441 4 Gm10516
+4930451G09Rik 1.06510899754063 -1.13917247326995 1.56184533087519 0.140402574895956 0.252848126899102 -5.10843610513404 4 4930451G09Rik
+4933421O10Rik 1.06510899754063 -1.13917247326995 1.56184533087519 0.140402574895956 0.252848126899102 -5.10843610513404 4 4933421O10Rik
+St5 1.16930236967868 0.570831252021079 1.5614487016406 0.140495804078905 0.252848126899102 -5.1040121162741 24 St5
+Snhg6 0.414987169877994 6.88812749706196 1.55780210312341 0.141355425161323 0.25372730599006 -5.98952812049796 1762 Snhg6
+Senp2 1.23316924476294 -1.04230579272429 1.55749058186328 0.141429068018999 0.25372730599006 -5.10845162064594 8 Senp2
+Mir3069 1.1967490330554 -0.650811148818883 1.55602233545589 0.141776597800618 0.25395148836814 -5.10475733476948 9 Mir3069
+Snord87 0.414265796353463 6.8857147404585 1.55208332473347 0.142712543117168 0.255227291060641 -5.99741848701943 1759 Snord87
+4932702P03Rik 1.50538536018542 -0.190947829244951 1.54735549642484 0.143842852742846 0.256846158027523 -5.12545513466049 20 4932702P03Rik
+Mir341 -1.11910417431075 -0.268449437687187 -1.54504024071338 0.144399143660684 0.257436598307563 -5.09444510471904 10 Mir341
+Fam19a2 -1.08108870526458 -1.03317285995058 -1.54274205574173 0.144953138847169 0.258021109866802 -5.14743110946704 4 Fam19a2
+Mir2137 -1.25397648150412 -0.986373420602892 -1.53902949676667 0.145851890715621 0.259216522284305 -5.1478345461744 6 Mir2137
+D130009I18Rik 1.27231702999427 -0.381630515366513 1.53514141676594 0.146798196085364 0.260339335086546 -5.13021329550442 15 D130009I18Rik
+Elp3 -1.44496494213962 1.49755589579473 -1.53456064882656 0.146939992809584 0.260339335086546 -5.2298474338907 55 Elp3
+Six3os1 -1.3837215389721 -1.31472125515486 -1.53340154891498 0.147223338498394 0.260436944537469 -5.17353312572401 8 Six3os1
+Rmst -1.34494122456533 -0.508623208350141 -1.52875491880875 0.148363873123417 0.262048265067831 -5.13210633012727 10 Rmst
+4930564K09Rik 1.15715309457904 -1.07849411987367 1.51860435848876 0.150881394880579 0.266082954495736 -5.16248906856691 7 4930564K09Rik
+Gm16793 1.16848451363027 -1.0728581336826 1.51349594367936 0.152161963356188 0.267725701552132 -5.16901059939246 8 Gm16793
+Mir200c 1.09203191538954 1.0686845390219 1.51301819802264 0.152282191329828 0.267725701552132 -5.21562223006706 43 Mir200c
+Mir500 -0.959184822315059 1.55556768404836 -1.50996567016574 0.153052273761653 0.268308865049533 -5.27805724838699 47 Mir500
+Brd2 1.15193277255657 1.46278337085446 1.5098394012633 0.153084199077341 0.268308865049533 -5.26772609337448 52 Brd2
+1700061I17Rik -0.993032112528657 -1.07849411987367 -1.5078450002038 0.153589200235581 0.268618908035033 -5.19885089576796 5 1700061I17Rik
+2010009K17Rik 1.39848757206625 0.0129207590044654 1.50658142705804 0.153909874663779 0.268618908035033 -5.1753515727655 21 2010009K17Rik
+4930549G23Rik 1.15784945023494 -1.07849411987367 1.50450440196419 0.154438215311991 0.268618908035033 -5.18132752967772 7 4930549G23Rik
+Arfrp1 1.15784945023494 -1.07849411987367 1.50450440196419 0.154438215311991 0.268618908035033 -5.18132752967772 7 Arfrp1
+Gm16675 1.15784945023494 -1.07849411987367 1.50450440196419 0.154438215311991 0.268618908035033 -5.18132752967772 7 Gm16675
+9230116N13Rik 1.06454128715679 -1.13917247326995 1.50290619358259 0.154845796366435 0.268917889884478 -5.18797830371707 4 9230116N13Rik
+4930515G01Rik 0.992431794232819 -0.788253108012747 1.49297552868103 0.157398682710309 0.272936013635962 -5.18861224143696 7 4930515G01Rik
+Mir381 -0.585788303821621 4.02795786800028 -1.48635287193065 0.159120749771416 0.275503452942618 -5.77368217940814 263 Mir381
+Mir377 -1.26023741335144 -0.742931848089659 -1.46946309676428 0.163584151533594 0.282783957164269 -5.22241603606054 8 Mir377
+Slc25a43 -1.17913476508088 -1.42941348513087 -1.46857624117987 0.163821380968959 0.282783957164269 -5.27142485692471 4 Slc25a43
+Gm15850 -1.19142307125329 -1.42941348513087 -1.46628124024459 0.164436616186004 0.283417188924819 -5.27443785148495 4 Gm15850
+4930577N17Rik 0.996261471651621 -0.788253108012747 1.46486383853075 0.164817550391935 0.283645286571943 -5.22556084614497 7 4930577N17Rik
+Gm1976 1.17098543636347 -1.0728581336826 1.46338871742997 0.165214778610828 0.283900696377943 -5.23522027677804 8 Gm1976
+Gnas 1.20481163504504 3.01946961304055 1.44714466040454 0.169642076912222 0.291070089859918 -5.63385665345255 198 Gnas
+Trpc4 -1.12214295081842 -0.63693223477029 -1.44324497998824 0.170719487323175 0.292478881435048 -5.24590464097049 8 Trpc4
+Mir1839 0.440343224508104 6.65996421341352 1.43932422020417 0.171808441988587 0.293903196865034 -6.13404680514468 1655 Mir1839
+Gm16861 1.02101890973297 0.0237430425874912 1.4372048018983 0.172399485659686 0.294472774158237 -5.24662386648199 15 Gm16861
+Rnu73b 0.921794509533217 1.40212948737186 1.43527079633787 0.17294029293129 0.294954968960541 -5.35714724474774 44 Rnu73b
+9330162012Rik 1.1439446656217 -0.676617508502311 1.43366062517497 0.173391617780733 0.295283337145994 -5.26641582277432 10 9330162012Rik
+1700008J07Rik 1.13211025049156 -0.682253494693378 1.43155460784931 0.173983398326015 0.295849564068529 -5.26903519525208 9 1700008J07Rik
+Snora23 1.20628823206499 -0.684171990235058 1.42281586307131 0.176456826615396 0.299171979403534 -5.28019781733805 14 Snora23
+4930506C21Rik 0.970252362879898 -0.392012482832458 1.42250461225319 0.176545456709643 0.299171979403534 -5.27331937270512 9 4930506C21Rik
+Mir142 0.410046157034538 10.2906694825108 1.4218785186046 0.17672385111129 0.299171979403534 -6.41435699163406 19662 Mir142
+Snora21 0.959353356143857 0.507946560272087 1.41623429110422 0.178338802850048 0.301115991489993 -5.28552716691184 20 Snora21
+Snord65 -1.23356235450304 4.06885013060286 -1.41596621878151 0.178415806740733 0.301115991489993 -5.85809835998808 320 Snord65
+Mir501 0.955024236284725 4.54147542300529 1.41510313454645 0.178663914319654 0.301115991489993 -5.93664817702189 395 Mir501
+2410006H16Rik 0.361629145305105 7.57050758085267 1.41328401324661 0.179187781889619 0.301553479551704 -6.23986339628376 2927 2410006H16Rik
+4930455H04Rik 1.13172981083616 -0.682253494693378 1.40835127249367 0.180614676369773 0.303507136580134 -5.29864005434158 9 4930455H04Rik
+D330041H03Rik 1.39156614960393 -0.558690449548107 1.40593276317899 0.181317688516695 0.304240415584632 -5.30345383247936 20 D330041H03Rik
+Icmt 1.20612960113274 -0.684171990235058 1.40322513481035 0.18210741065202 0.305116821665132 -5.30510284062866 14 Icmt
+2900076A07Rik 0.423795449217499 6.67156273621472 1.3964570180697 0.184093807847588 0.307992719580788 -6.19163088513208 1663 2900076A07Rik
+Luc7l 1.4356244163844 0.36209982723262 1.39261137548867 0.185230378351142 0.309440500290854 -5.32601427080344 36 Luc7l
+Pnpla2 1.02936952347131 0.947589949833786 1.38809066529025 0.186573812314756 0.31122912258938 -5.36176823700877 32 Pnpla2
+Rnu11 1.07261723735483 3.54085705017394 1.37958006862461 0.1891245750451 0.315023562228408 -5.8124177161749 297 Rnu11
+Scarna3a 0.358634347087909 6.84417523287242 1.37423633297104 0.190740692166723 0.317252375746693 -6.23449885762334 1742 Scarna3a
+Mir879 -0.865443524827827 0.513582546463155 -1.37321027685045 0.191052290488549 0.31730809817676 -5.32105187421976 19 Mir879
+4930417O13Rik 1.18361492567874 -0.461823769002454 1.37210884759797 0.191387240468858 0.317402385719429 -5.34431284007925 12 4930417O13Rik
+Mir1843b 0.356514470405414 6.84310339090516 1.36899584712098 0.192336508638543 0.318513724755555 -6.24116798547559 1740 Mir1843b
+4930592A05Rik 1.03052531511564 -1.13917247326995 1.36610709134638 0.193220824547368 0.319052041691096 -5.36399273876038 6 4930592A05Rik
+Gm20300 1.03052531511564 -1.13917247326995 1.36610709134638 0.193220824547368 0.319052041691096 -5.36399273876038 6 Gm20300
+Psmd2 1.47834506664869 0.852672302453096 1.36471212861521 0.193649039068748 0.319087273512383 -5.39396285673084 58 Psmd2
+Mir339 0.40343749694094 5.26814352346546 1.36421616220313 0.193801472869484 0.319087273512383 -6.10182981490915 599 Mir339
+2810055G20Rik -0.97189420184314 0.494067646223494 -1.36078572848097 0.194858481133459 0.320365312641608 -5.33994058231233 19 2810055G20Rik
+Mir196b -1.13510810552843 -0.405891396881051 -1.35478140249157 0.196719850556781 0.322960215086743 -5.34712927474264 10 Mir196b
+Gm6981 1.0403319439215 -0.727574754616467 1.3501513241177 0.198165030794737 0.324865373759763 -5.3710798023265 8 Gm6981
+Mir296 -1.05016591608505 -0.376655389359266 -1.3390650655849 0.201660348607318 0.330121173258177 -5.36030020128242 11 Mir296
+Snord64 -0.5066981906967 3.71324562206005 -1.33655464337627 0.202458725817311 0.330953303950647 -5.91647756097912 197 Snord64
+Snord35b 1.09275289003475 -0.00490479042588459 1.32292989560528 0.206836338140382 0.337625553387949 -5.39467067778802 15 Snord35b
+2810454H06Rik -1.03206410146289 0.244172768278416 -1.32151347019798 0.207295773208692 0.337892110330168 -5.37505541531076 18 2810454H06Rik
+Gm10532 0.930350784049422 -1.18449373319304 1.30182675888512 0.213766681711239 0.347446985516415 -5.4461738806082 5 Gm10532
+Gm16907 0.930350784049422 -1.18449373319304 1.30182675888512 0.213766681711239 0.347446985516415 -5.4461738806082 5 Gm16907
+Snord82 0.521973959385618 3.65015969513716 1.2980839555761 0.215015018125258 0.34897885587613 -5.94664789550243 191 Snord82
+Snhg5 -0.967225523765167 0.0824699275700137 -1.29541157390313 0.2159098951753 0.349918908831395 -5.40370928399367 13 Snhg5
+Mir363 1.15445492135561 -0.478497195912167 1.29452460128447 0.216207564177154 0.349918908831395 -5.43848438880553 13 Mir363
+Gm19710 0.93508992538424 -1.18449373319304 1.28764646778302 0.218526999893145 0.352672286956263 -5.46306405992466 5 Gm19710
+Slc35c2 0.93508992538424 -1.18449373319304 1.28764646778302 0.218526999893145 0.352672286956263 -5.46306405992466 5 Slc35c2
+Snord57 0.262437228600292 9.4077044747777 1.2842500554542 0.219679620562366 0.35403170488935 -6.53234377843161 10268 Snord57
+Scarna9 0.753642588298107 2.12767296655412 1.27094440177951 0.224241711620433 0.36087417906758 -5.69229097174786 67 Scarna9
+9330178D15Rik -1.05713219200343 -1.07849411987367 -1.27002691260158 0.224559037706864 0.360875862004974 -5.49789518736927 5 9330178D15Rik
+Mir130b -0.530010375624871 3.21349184345499 -1.26785063937428 0.225313153729231 0.36157849283411 -5.9082089021571 135 Mir130b
+Sh2d3c -0.946567512897814 0.0824699275700137 -1.25923701193745 0.228317603257779 0.365885372636413 -5.44614755916012 13 Sh2d3c
+Snord49a 0.381301583110176 6.11567405056436 1.25241371523562 0.230719961977962 0.369216657246641 -6.32557176857517 1114 Snord49a
+Dtnb 1.34663394444782 -0.393930978374138 1.24318551402563 0.234000665323399 0.373942239683471 -5.50079398296816 26 Dtnb
+4933404O12Rik 0.960987626070486 -1.18449373319304 1.2390904903603 0.235468171833537 0.375761096590301 -5.51979500865598 5 4933404O12Rik
+9330133O14Rik 0.902410788307409 -1.19510484539135 1.23568661810827 0.236693481520096 0.377188913986634 -5.52481098009737 6 9330133O14Rik
+Mir1970 0.981623687672708 -1.16497883295338 1.23358760674581 0.237451560697612 0.377869220022281 -5.52422742180909 7 Mir1970
+4933433G15Rik -0.845091810799975 -1.13917247326995 -1.21970156103377 0.242514607267494 0.384823868748979 -5.56216873762972 4 4933433G15Rik
+Mir487b -0.845091810799975 -1.13917247326995 -1.21970156103377 0.242514607267494 0.384823868748979 -5.56216873762972 4 Mir487b
+4930413G21Rik 0.989353987464206 -0.386376496641391 1.21883417397784 0.242833641980074 0.384823868748979 -5.51908435781945 12 4930413G21Rik
+Snord83b 0.418249712013688 3.86840948135021 1.21625843057086 0.24378295710375 0.385792446678751 -6.08239291387437 221 Snord83b
+Mir744 0.375928995244175 7.06487761533261 1.21046077244345 0.245930308976254 0.388148264070044 -6.45312420350352 2175 Mir744
+Gm11602 1.0569663896266 1.47452012926735 1.21040249722871 0.245951967504506 0.388148264070044 -5.64187054631556 61 Gm11602
+Clk1 1.34983134183554 0.892119610003834 1.20797593928329 0.246855136854761 0.388972207417494 -5.58134407870492 54 Clk1
+Rn45s 0.683447675537728 14.2197149824842 1.20716947910787 0.247155872373079 0.388972207417494 -6.94183060696878 360404 Rn45s
+Orc6 0.828069658072878 -0.835052547360434 1.19938377098925 0.250073865655696 0.393012592445325 -5.54966196863703 5 Orc6
+Gm10336 -0.862983197557129 -1.13917247326995 -1.19601713252826 0.251343875564565 0.393012592445325 -5.58891156888004 4 Gm10336
+Gm16897 -0.862983197557129 -1.13917247326995 -1.19601713252826 0.251343875564565 0.393012592445325 -5.58891156888004 4 Gm16897
+Abhd11 0.914456828775136 -0.664690062867476 1.19552627276665 0.251529460444447 0.393012592445325 -5.550699097181 8 Abhd11
+D030028A08Rik 0.921530541409756 -1.19510484539135 1.19301988845778 0.25247872941492 0.393012592445325 -5.57311877933865 6 D030028A08Rik
+Dennd2d 0.921530541409756 -1.19510484539135 1.19301988845778 0.25247872941492 0.393012592445325 -5.57311877933865 6 Dennd2d
+Gm14403 0.921530541409756 -1.19510484539135 1.19301988845778 0.25247872941492 0.393012592445325 -5.57311877933865 6 Gm14403
+Gm3219 0.921530541409756 -1.19510484539135 1.19301988845778 0.25247872941492 0.393012592445325 -5.57311877933865 6 Gm3219
+Wbscr25 -0.93987296072539 -1.13917247326995 -1.18824159745951 0.254296125357236 0.395302287510363 -5.59759867475912 4 Wbscr25
+Gabpb1 0.916773949402714 -0.788253108012747 1.18369591465584 0.256034399575008 0.397462925054535 -5.56549504794546 7 Gabpb1
+Mir211 0.825074748111626 -0.880373807283523 1.17378618405685 0.259855584968479 0.40284676963184 -5.57990075138058 6 Mir211
+Nt5c2 1.05516837907923 0.326231814341724 1.17272736320358 0.260266441095664 0.402936240556516 -5.56509032003189 26 Nt5c2
+1500015L24Rik 0.808616217238156 -1.24517208658932 1.16726413306531 0.262394269069057 0.404583595956478 -5.60687790222948 4 1500015L24Rik
+Cyp2d37-ps 0.808616217238156 -1.24517208658932 1.16726413306531 0.262394269069057 0.404583595956478 -5.60687790222948 4 Cyp2d37-ps
+Trpt1 0.808616217238156 -1.24517208658932 1.16726413306531 0.262394269069057 0.404583595956478 -5.60687790222948 4 Trpt1
+BC029722 0.823443920149512 -1.23129317254072 1.16607728334613 0.262858281841981 0.404752091203375 -5.60671637501778 5 BC029722
+1810062O18Rik 0.922758966567288 -0.788253108012747 1.16111625399114 0.264804653612883 0.407199608857547 -5.5903045818008 7 1810062O18Rik
+Snord89 0.738345291933225 1.20312081396993 1.15974138941317 0.265346001348298 0.407482890361249 -5.65593005904902 36 Snord89
+Polg2 0.884660693310263 -1.24517208658932 1.1577939018345 0.266114262880999 0.407565602613717 -5.61723207863543 4 Polg2
+Sgsm1 0.884660693310263 -1.24517208658932 1.1577939018345 0.266114262880999 0.407565602613717 -5.61723207863543 4 Sgsm1
+Mir3058 -0.978203405704609 -0.498012096151827 -1.14953116886071 0.269392696348615 0.411904246746464 -5.58396014066336 9 Mir3058
+Mirlet7c-2 -0.313141269327901 5.8169620327074 -1.14883798280248 0.269669125608772 0.411904246746464 -6.42193298909956 861 Mirlet7c-2
+Mir376b -0.99103045209925 1.03829066633399 -1.14279150067575 0.272089498256322 0.414737087115015 -5.63858333409662 42 Mir376b
+Mir30a -0.151237258601805 15.2301476884988 -1.14239018110005 0.272250725897586 0.414737087115015 -7.0852176231084 565907 Mir30a
+Zfp414 0.85018887029495 -1.23129317254072 1.14035831952976 0.273068126226575 0.415093483425908 -5.63464742242361 5 Zfp414
+2610001J05Rik -0.86697193885018 -0.544811535499514 -1.14000047811695 0.273212275243521 0.415093483425908 -5.59553124660726 7 2610001J05Rik
+Gm5089 1.19134922509429 0.268662794525323 1.1381213178655 0.273970202991538 0.415691491507108 -5.60872857801353 34 Gm5089
+Ankzf1 1.12914177457743 -0.218382196489221 1.13664393067542 0.274567199850722 0.416044057144321 -5.60992873862588 18 Ankzf1
+Rpl22 1.09218207381924 0.761804412553155 1.13340898087306 0.275877847845008 0.417475629165987 -5.63984950101587 40 Rpl22
+Gm9999 0.881407773684291 -1.23129317254072 1.13199470748295 0.276452328431551 0.417576407133251 -5.64361970581462 5 Gm9999
+Mir1965 -0.872346376244262 -0.941052160679803 -1.1314437021438 0.276676392456387 0.417576407133251 -5.64344814416069 5 Mir1965
+1700113A16Rik 0.751208638851327 -0.101771470971538 1.12825054116647 0.277977580239225 0.418986022527021 -5.60264200827995 11 1700113A16Rik
+Parp6 1.01660160898912 0.172934248903557 1.10488791379887 0.287638347248928 0.432975401333808 -5.63192280524991 24 Parp6
+Gm10649 -0.892846942526544 -0.742931848089659 -1.09635581501043 0.291228443757408 0.437316695864095 -5.65951959369185 6 Gm10649
+Mir5128 0.980265466022246 -0.0477575943918147 1.0962126985773 0.291288947288968 0.437316695864095 -5.64043620544502 20 Mir5128
+AA465934 -0.998174655804847 -0.455382481422444 -1.09422848561995 0.292128753507906 0.438001192841683 -5.6384531760545 15 AA465934
+Mirg -0.474362072277141 6.82767679984071 -1.08788511862449 0.294825638847012 0.44112747945308 -6.57223781945416 1940 Mirg
+Krit1 -0.738246664477569 -0.835052547360435 -1.08750674463041 0.294987087487029 0.44112747945308 -5.67818166859644 5 Krit1
+Zfp326 0.916204728436975 0.141670101541695 1.08461400360127 0.296223563256996 0.441769310816773 -5.64946191365176 19 Zfp326
+9430060I03Rik 0.893039869828009 -0.484133182103234 1.08424508768217 0.296381529077199 0.441769310816773 -5.66824954289941 10 9430060I03Rik
+Mphosph9 0.825946492812557 -0.835052547360434 1.08364147818961 0.296640122891534 0.441769310816773 -5.67407248575821 7 Mphosph9
+Mir465 0.753847528822331 -1.27661443246381 1.08288371043005 0.296964996841775 0.441769310816773 -5.70008050633046 4 Mir465
+Mir7-1 -0.462285314925654 2.79727444411883 -1.07768367150356 0.299201499765338 0.444023980943917 -6.04570260584071 96 Mir7-1
+4930502E09Rik 0.820061649339301 -1.27661443246381 1.07755051682844 0.299258931942044 0.444023980943917 -5.70556790028921 4 4930502E09Rik
+Tug1 0.943551372770822 1.74501709615624 1.07570169377573 0.300057207710029 0.444071701003612 -5.82821799993449 78 Tug1
+4930414N06Rik 0.732304356782422 -1.27661443246381 1.07567328957759 0.300069484201389 0.444071701003612 -5.70749397255429 4 4930414N06Rik
+Pvt1 0.777499165180762 -0.452690836228738 1.07397292650801 0.300805069325891 0.444583658161712 -5.67426367019689 8 Pvt1
+Mir880 0.798518477299392 -1.27661443246381 1.06858448026948 0.303144932062895 0.446380139558595 -5.7147416680859 4 Mir880
+9330151L19Rik 0.797000406484024 -1.27661443246381 1.06847129963835 0.303194222750142 0.446380139558595 -5.71485705720905 4 9330151L19Rik
+Lins 0.797000406484024 -1.27661443246381 1.06847129963835 0.303194222750142 0.446380139558595 -5.71485705720905 4 Lins
+A730020M07Rik 0.759617567138328 -1.27661443246381 1.06479234302223 0.304799642362463 0.447013357243663 -5.7186021728347 4 A730020M07Rik
+F630206G17Rik 0.759617567138328 -1.27661443246381 1.06479234302223 0.304799642362463 0.447013357243663 -5.7186021728347 4 F630206G17Rik
+Gm21944 0.759617567138328 -1.27661443246381 1.06479234302223 0.304799642362463 0.447013357243663 -5.7186021728347 4 Gm21944
+Snord8 0.659763836479369 1.10794348423359 1.06250387902545 0.305801430794694 0.447906845361676 -5.74488769750243 32 Snord8
+Afg3l1 0.944955196582147 0.447268206875807 1.06058601378491 0.306642849914595 0.448563450964811 -5.68339660157891 27 Afg3l1
+Vps39 0.961960880735596 -0.76568157730752 1.05915803437452 0.307270446487918 0.448905991603988 -5.69739803344418 12 Vps39
+Mrpl48 0.838840541796115 -0.239213430165402 1.05463054356545 0.309266509401883 0.451244357068476 -5.68718625388737 11 Mrpl48
+Wls -0.798306174379161 -0.590132795422603 -1.04838398068904 0.312036040279375 0.454149609721631 -5.69285981724256 8 Wls
+Mir101c 0.678674341657184 -0.941052160679803 1.04834423627082 0.312053719563329 0.454149609721631 -5.71644979537614 5 Mir101c
+4930565N06Rik -0.760881657711942 -0.452690836228738 -1.04536813721085 0.313379640481894 0.455414522982691 -5.68467326756101 8 4930565N06Rik
+Gm19782 -0.824138055093141 -1.04705177399917 -1.04419216716558 0.313904694022045 0.455414522982691 -5.74437221530442 5 Gm19782
+E130317F20Rik 0.769245257418443 -0.498012096151827 1.04291674364268 0.3144748770515 0.455414522982691 -5.7049158335577 9 E130317F20Rik
+Mir672 -0.747248291924879 -1.04705177399917 -1.04198352749126 0.314892552981749 0.455414522982691 -5.74657924729597 5 Mir672
+Mir20a -0.370723568916546 5.31004708857036 -1.04192548554098 0.314918543938074 0.455414522982691 -6.48442003496676 643 Mir20a
+0610043K17Rik 0.984989107300095 0.566661427402775 1.03734276139365 0.316975604930417 0.457287012691463 -5.71838241477771 32 0610043K17Rik
+2610307P16Rik -0.91429583632135 -0.954931074728396 -1.03725537976782 0.317014922908806 0.457287012691463 -5.74201320442599 6 2610307P16Rik
+B630019K06Rik 0.719990612273558 -0.756810762138252 1.03218755693734 0.319301294119003 0.46000350579518 -5.72479023365126 7 B630019K06Rik
+Gm14872 0.835812662260224 -0.835052547360434 1.03077941192774 0.319938704270154 0.460340556837637 -5.72736949007166 7 Gm14872
+Cops5 0.955225694844395 -0.407547774818283 1.02575302603018 0.322221466881596 0.463041175959573 -5.72322668671274 18 Cops5
+Gm19461 0.915494510219759 -0.788253108012747 1.02058918961822 0.324578899608511 0.465842169123662 -5.73572336698256 11 Gm19461
+Mir702 -0.826707259520221 -0.299891783561682 -1.01839078954777 0.325586298913891 0.465882836241176 -5.70404861077289 12 Mir702
+E130307A14Rik -0.788814584438982 -0.590132795422603 -1.01803072764692 0.325751509050542 0.465882836241176 -5.72282760292051 8 E130307A14Rik
+Mir677 -0.46535805282509 2.7048223776038 -1.01785498662811 0.325832167677878 0.465882836241176 -6.08983176917819 94 Mir677
+2900008C10Rik -0.828374176793865 -0.558690449548107 -1.01087466362321 0.329047523081663 0.469891394037769 -5.72790706263801 8 2900008C10Rik
+Scarna10 0.743056669215782 0.528777793948269 1.00234095871278 0.333009304922059 0.474954521145087 -5.74101823672795 23 Scarna10
+Snord7 -0.835470371413723 -0.676617508502311 -1.00141282716469 0.333442241670381 0.474978274339456 -5.74740702860384 10 Snord7
+Oaz1-ps 0.674104425949451 1.49609964982675 0.999155033797244 0.334497093796054 0.475886763118825 -5.86801256135581 41 Oaz1-ps
+Kcnq1ot1 0.910278085334024 -0.218382196489221 0.997758138243239 0.335150923261523 0.476223167423908 -5.74375068180754 16 Kcnq1ot1
+4921513I03Rik -0.898652409766853 -0.954931074728396 -0.996357559472656 0.335807392489445 0.476352069705573 -5.7819683962692 6 4921513I03Rik
+Snord111 0.487167361404432 2.40322325564047 0.995476712980872 0.336220726321058 0.476352069705573 -6.04721452535901 82 Snord111
+Mir326 -0.382358415670825 3.27011368251419 -0.994342337417545 0.336753562180123 0.476352069705573 -6.21830968460093 144 Mir326
+A330035P11Rik 0.965364268939122 -0.768738207773087 0.993167927399008 0.337305836954342 0.476352069705573 -5.76224148604484 11 A330035P11Rik
+Wiz 0.750657520168244 0.574260899859435 0.993118546042969 0.337329073025507 0.476352069705573 -5.7530631806465 26 Wiz
+4930573O16Rik 0.724242940462577 -0.880373807283523 0.988574355151803 0.33947219472701 0.478785876617451 -5.77014512800664 6 4930573O16Rik
+C030016D13Rik 0.736627595056793 -0.880373807283523 0.98365906844454 0.341801211615667 0.48147553389318 -5.7748146431183 6 C030016D13Rik
+Mir106b -0.272040824179646 6.30534021503053 -0.978912859532382 0.344060849311784 0.483787015120022 -6.6415010931846 1230 Mir106b
+Mir93 0.231991919214371 8.92958242253252 0.978432473677121 0.344290145729586 0.483787015120022 -6.83817344932306 7480 Mir93
+A130049A11Rik 0.749480333675935 -0.90486383353043 0.973825967230468 0.346494399579791 0.485688095725481 -5.78593949448688 8 A130049A11Rik
+Ppp4r1l-ps 0.749480333675935 -0.90486383353043 0.973825967230468 0.346494399579791 0.485688095725481 -5.78593949448688 8 Ppp4r1l-ps
+Snora44 0.286033309288083 5.62130667581717 0.971157099851877 0.3477760255746 0.48688643580444 -6.58548506620032 724 Snora44
+Kat5 0.866499552085197 -0.402623595030772 0.964975242015777 0.35075746085532 0.490458655436177 -5.78144072211864 12 Kat5
+Osbpl1a 1.09737003164025 0.516465901027703 0.963410623524111 0.351514898897857 0.490916156233114 -5.78884397041858 52 Osbpl1a
+Mir1982 0.739352688973082 0.294469154208751 0.962125981745475 0.35213765737009 0.491184678556568 -5.76656609837178 17 Mir1982
+Asb7 0.703526575105393 -0.925695067206612 0.958123449514082 0.354082936025685 0.492563942310599 -5.80224617247519 7 Asb7
+Hdac10 0.974865932277475 -1.17447243960754 0.957964659851365 0.354160264679881 0.492563942310599 -5.81150986834852 18 Hdac10
+Brat1 0.726590679354257 -0.880373807283523 0.957428291454004 0.354421557087644 0.492563942310599 -5.79939146334398 6 Brat1
+Mir491 -0.684898615634921 -0.835052547360435 -0.953861551192324 0.35616253103266 0.494381323489374 -5.80900377777519 5 Mir491
+Pum2 0.976211707535353 0.893848485511468 0.941843079399731 0.362072854082899 0.501974637312986 -5.83976051882873 52 Pum2
+Flcn 0.819178463384112 0.21104107159461 0.936286718836365 0.364828219319466 0.505180823111056 -5.78834781376735 22 Flcn
+2310010J17Rik -0.781496807473563 -0.752064780863374 -0.934867786030351 0.365534182055843 0.505544850576626 -5.81765744708763 10 2310010J17Rik
+Yipf2 0.803138506076097 -0.880373807283523 0.933170155190723 0.366380047226091 0.506101251676719 -5.82160275803741 12 Yipf2
+Pex11b 0.745690782417397 -0.742931848089659 0.932131479018354 0.366898247195751 0.506204232225335 -5.81894124952379 10 Pex11b
+Mir301b -0.741931823310326 0.0963488416186067 -0.928572452406972 0.368677700638315 0.507450144605635 -5.78347200652652 14 Mir301b
+Mir3066 -0.837579077861343 -0.558690449548107 -0.927767726846745 0.369080873917973 0.507450144605635 -5.80554388805339 8 Mir3066
+1110054M08Rik 0.762586926696282 -0.108062930415306 0.927658715560211 0.369135512728026 0.507450144605635 -5.79933690871854 16 1110054M08Rik
+2810008D09Rik 0.62387744108405 2.75194116634391 0.919384284757436 0.373299112497706 0.512041876787549 -6.18722980685037 137 2810008D09Rik
+Gm5512 0.771365549912191 -0.452690836228738 0.919237589387622 0.373373217780228 0.512041876787549 -5.82241315825623 12 Gm5512
+Rbbp8 0.886305125756175 -0.0477575943918147 0.917555243290929 0.374223801048332 0.512592265301497 -5.81282466752688 18 Rbbp8
+Gm11974 0.778082873591224 -0.447944854953861 0.909892000761802 0.37811508552564 0.517301334034479 -5.83079148689953 11 Gm11974
+Mir369 -0.74269677210509 0.589456147344549 -0.905344093956725 0.380437470711399 0.519596997836352 -5.82156063054654 26 Mir369
+Mir26a-2 0.485967334173185 2.96081541822386 0.904823661302764 0.380703847669755 0.519596997836352 -6.23863459210439 131 Mir26a-2
+Minos1 0.704827095217255 0.326231814341724 0.900400917247283 0.382972698552506 0.522069114753178 -5.81919593446542 22 Minos1
+Deaf1 0.779036313891313 -0.299891783561682 0.896459320434846 0.385002448889921 0.524209778261814 -5.83491078724319 14 Deaf1
+Gm19466 -0.749840672361975 -1.04705177399917 -0.887587437647754 0.389597708777317 0.529834309552942 -5.89076869788414 5 Gm19466
+Gm2518 0.63646451042641 -0.558690449548107 0.883457449799982 0.391749438497377 0.532126320625604 -5.85297878336349 8 Gm2518
+Mir505 0.574628179268003 0.386589853479527 0.877080062325064 0.395087742631044 0.535616337424576 -5.8408806452811 16 Mir505
+Gm13483 -0.650881842270608 -1.13917247326995 -0.876756483145742 0.395257630246707 0.535616337424576 -5.90961874985058 4 Gm13483
+A930016O22Rik -0.909159760956733 -0.165684653346019 -0.874712631220314 0.39633183750076 0.535965610314034 -5.83382312143566 20 A930016O22Rik
+4930526L06Rik -0.646483610508766 -1.13917247326995 -0.874478831554822 0.39645484233571 0.535965610314034 -5.91157337325639 4 4930526L06Rik
+1500011K16Rik 0.687958770706193 -0.941052160679803 0.866684426419982 0.400570191138535 0.540789721466861 -5.88463986982684 7 1500011K16Rik
+Adamts10 0.766269359657236 -0.742931848089659 0.865927841035999 0.400971169466226 0.540789721466861 -5.87691249385262 10 Adamts10
+Mir206 -0.641735198874169 -1.04705177399917 -0.859684053228752 0.404290476936943 0.544080673710294 -5.91464885848361 5 Mir206
+Mirlet7a-1 0.288440707007994 4.74252865689731 0.859544351286645 0.404364952941568 0.544080673710294 -6.58293245452761 419 Mirlet7a-1
+Mir382 -0.527248187537959 0.0495494022709194 -0.854532688517629 0.407042720034116 0.547038567207216 -5.84404452207965 12 Mir382
+Snord73a 0.572583034995795 1.81609219396321 0.851752202751694 0.408533400862583 0.548396012216715 -6.06031448455445 64 Snord73a
+AI450353 -0.739501717206301 -0.628239618113655 -0.84525729275282 0.412029489929552 0.551965918621367 -5.88226286676174 12 AI450353
+Rnf126 0.61640700457571 -0.941052160679803 0.844020033078334 0.412697708943189 0.551965918621367 -5.90363669815116 5 Rnf126
+4930452A19Rik -0.567623714118899 -1.13917247326995 -0.842981854548559 0.41325895737657 0.551965918621367 -5.93813552591444 4 4930452A19Rik
+Mir20b -0.567623714118899 -1.13917247326995 -0.842981854548559 0.41325895737657 0.551965918621367 -5.93813552591444 4 Mir20b
+Gm20757 -0.731130631705067 -1.04705177399917 -0.842329981431555 0.41361162175396 0.551965918621367 -5.92915547644012 5 Gm20757
+4931431C16Rik -0.591970897908513 -0.484133182103234 -0.841074383427949 0.414291458744729 0.552203761888197 -5.87182267817147 8 4931431C16Rik
+Mir541 -0.389131733074012 6.47782397759286 -0.840213916014968 0.414757777334079 0.552203761888197 -6.78224992188811 1553 Mir541
+Klc2 0.629802083792426 -0.941052160679803 0.838734263576251 0.415560458996938 0.552479168421516 -5.9080019839148 5 Klc2
+Snapc4 0.677537959473713 -0.941052160679803 0.838048077598245 0.41593304616484 0.552479168421516 -5.90856686178304 9 Snapc4
+2210408F21Rik 0.673125158878238 3.63276510319773 0.835452055835978 0.417344619062095 0.553709546918431 -6.41859057863293 234 2210408F21Rik
+Gm10865 0.652530700740246 -0.558690449548107 0.834529610770428 0.417846946728652 0.553732132656668 -5.8940864123663 8 Gm10865
+Lmf1 -0.698964865722747 -0.133213816846033 -0.831214508127132 0.419655480523413 0.555440326826189 -5.86465518441044 13 Lmf1
+B230208H11Rik -0.324105163507426 4.07425728624104 -0.830383638654244 0.42010955482121 0.555440326826189 -6.51194043474033 250 B230208H11Rik
+Zfp207 0.813007063755825 -0.0836318824890616 0.828134659773233 0.421340237870797 0.556422698391875 -5.88719575711569 19 Zfp207
+Mir1945 0.597491165734377 -0.941052160679803 0.826047545337222 0.422484441705835 0.557288725995789 -5.91837835814761 5 Mir1945
+Snora41 0.348564473053555 4.54185649419262 0.819592789265972 0.426035844548422 0.560279811338197 -6.58753509611365 394 Snora41
+Oxsr1 0.724767749665156 0.244978069667359 0.819331396413772 0.426180068646681 0.560279811338197 -5.88476749078111 24 Oxsr1
+D630024D03Rik 0.728476694326676 -1.31472125515486 0.818971143090679 0.426378890981613 0.560279811338197 -5.94729714256845 8 D630024D03Rik
+4933400L20Rik 0.515324865407562 -1.03317285995058 0.818083247017312 0.426869173233144 0.560279811338197 -5.9337772796173 4 4933400L20Rik
+Xist 0.723357937638788 -1.31472125515486 0.816666748076131 0.427652095638525 0.560279811338197 -5.94915534796961 8 Xist
+Dlg1 0.603909137429248 1.27329048309733 0.815752808761627 0.428157736836546 0.560279811338197 -5.99440605481118 45 Dlg1
+March2 0.877263658846623 0.62903919856468 0.815695775265458 0.428189303669507 0.560279811338197 -5.91500249911908 36 March2
+C230037L18Rik 0.602090880767705 -0.941052160679803 0.813307514125875 0.429512503460807 0.561367430067332 -5.92865426872929 5 C230037L18Rik
+Gm13375 0.630370755592059 -0.941052160679803 0.811990507037629 0.430243308062424 0.561679192790876 -5.9297082862367 5 Gm13375
+Gt(ROSA)26Sor -0.733479640637234 0.703375227668527 -0.811102967738619 0.430736253048963 0.561680073975848 -5.91552151445348 26 Gt(ROSA)26Sor
+Mir16-1 0.23749541505541 5.06012981661098 0.809632974888138 0.431553495333911 0.562103354082183 -6.66710805508667 499 Mir16-1
+4930523C07Rik 0.594215392165458 -0.544811535499514 0.807761652304698 0.432595297587676 0.562150931706581 -5.915729457308 7 4930523C07Rik
+Mir374 0.289766495627774 4.44733832008286 0.806913394226144 0.433068070964141 0.562150931706581 -6.58616786299793 323 Mir374
+Mir374c 0.289766495627774 4.44733832008286 0.806913394226144 0.433068070964141 0.562150931706581 -6.58616786299793 323 Mir374c
+Mir32 0.284410784956249 4.15923774757354 0.802255193307119 0.435670204852205 0.564332305440744 -6.54373122401893 274 Mir32
+4930481A15Rik 0.749607671194882 -0.676617508502311 0.802134533319532 0.435737739783782 0.564332305440744 -5.92746695739246 12 4930481A15Rik
+Mir409 -0.359607138432163 2.88484526509054 -0.797779273016708 0.438179914112214 0.566851793653103 -6.32177877712439 114 Mir409
+Cdh23 0.599378997186575 -0.00965077170076204 0.794288413364285 0.440143672025998 0.568747372346165 -5.90268758787859 14 Cdh23
+Mir187 -0.410978066923546 2.47994750376 -0.791106453483068 0.441938529712543 0.570420658825805 -6.25179118381728 82 Mir187
+1700012D01Rik 0.583673007317414 -0.544811535499514 0.784412244834506 0.445729690119356 0.574663928165181 -5.93404385599654 7 1700012D01Rik
+Tubgcp4 0.664451553261744 -0.360570136957963 0.781428132053519 0.447426298647817 0.576200233360225 -5.92858125197625 13 Tubgcp4
+D930016D06Rik 0.626414726591185 -0.925695067206612 0.770815021447429 0.453493261191949 0.58335491659528 -5.9606398937825 7 D930016D06Rik
+Cep57 0.681384751801818 -0.90486383353043 0.766753154462571 0.455828781677903 0.585698918800099 -5.96205602441123 8 Cep57
+A930006I01Rik -0.665296203586878 -0.0564502110484493 -0.764249316031887 0.457272188017012 0.586892650761991 -5.91664059502587 14 A930006I01Rik
+Spns1 0.563832082258649 -0.600743907620917 0.76139003304349 0.458923976722084 0.588350851056065 -5.9518091247888 9 Spns1
+Fut8 -0.594335457577261 -0.0202618838990762 -0.760096444549607 0.459672490960781 0.588649059692762 -5.91849005226079 13 Fut8
+Gm19522 -0.603683840589023 -0.590132795422603 -0.755842901826103 0.462139073141416 0.590653973169546 -5.94897829684297 8 Gm19522
+Mir874 0.295514313563059 4.89511091554138 0.755611590283585 0.462273442629627 0.590653973169546 -6.68933197812847 439 Mir874
+5031425E22Rik 0.426232500568612 1.59819729877775 0.753049543565295 0.463763358388416 0.591894845549421 -6.09850103143821 41 5031425E22Rik
+2610203C22Rik 0.717338709985131 -0.478497195912167 0.74698345640789 0.46730279346032 0.595745795908632 -5.96274275496501 15 2610203C22Rik
+BC039771 0.591670069535226 -0.941052160679803 0.731476967640175 0.476425656973266 0.606698297551894 -5.99117242861284 7 BC039771
+B230217O12Rik 0.561095991633646 -0.600743907620917 0.728108334120667 0.478421736774268 0.608560982897926 -5.97636714997683 9 B230217O12Rik
+Pradc1 0.638558125216705 -0.941052160679803 0.720376726518506 0.48302220728867 0.613728662044959 -5.99918286949762 7 Pradc1
+4930471I20Rik 0.628368284837395 -0.567561264717375 0.716644411151915 0.48525251902964 0.615389020070981 -5.98432330499153 13 4930471I20Rik
+Ubl4 0.588354263449582 -0.00490479042588451 0.716246202469665 0.485490840342292 0.615389020070981 -5.96107461669334 15 Ubl4
+Snora31 -0.36143449798853 4.31585910590137 -0.715484366086799 0.485946982545095 0.615389020070981 -6.63976294261444 320 Snora31
+Pisd-ps3 0.56333714379083 -0.0202618838990763 0.710204908076067 0.48911506227464 0.618714286092421 -5.96478675414579 15 Pisd-ps3
+Dleu2 0.219184098946397 8.12273369604978 0.708956946599182 0.489865734256984 0.618977633208437 -7.01267950795979 4399 Dleu2
+Ube2w 0.500646796546902 -0.0410931175752576 0.69543523444875 0.498043237514861 0.628614307527053 -5.97437115016694 12 Ube2w
+2310040G24Rik 0.521668371480116 -0.848931461409027 0.693309917822119 0.499335854000457 0.629232647004551 -6.01645462006701 8 2310040G24Rik
+Gm16973 0.520003601671916 -0.848931461409027 0.692816735376406 0.49963608955839 0.629232647004551 -6.01679548706659 8 Gm16973
+9430091E24Rik 0.632405272014803 1.08345345798668 0.690351426110223 0.501138492660048 0.630428908627469 -6.05646241852674 42 9430091E24Rik
+4930599N23Rik 0.731549498463023 -0.297616209139484 0.687698634645228 0.502758111464513 0.631137207128483 -5.99772425069657 22 4930599N23Rik
+Uqcc 0.60456771084976 0.00230964680615132 0.687617297753382 0.502807818825408 0.631137207128483 -5.98129860883947 18 Uqcc
+AF357425 -0.469274766892277 0.0356704882223264 -0.683451535972865 0.505357486136066 0.633640540309067 -5.97309261164346 11 AF357425
+Lrrc57 0.524349090633768 -1.03317285995058 0.680981371472743 0.506872917877587 0.634389061854647 -6.03572221948629 6 Lrrc57
+Mir16-2 -0.292148003746823 3.19006469968901 -0.680666215921933 0.507066454348325 0.634389061854647 -6.46705009548147 133 Mir16-2
+1700052K11Rik -0.500246978727084 -0.360570136957963 -0.677562993700312 0.508974434943859 0.636078674995556 -5.98437458158914 9 1700052K11Rik
+Snord98 0.255484149978109 5.08114085097502 0.673871566865267 0.511249489447753 0.638222830918913 -6.77177075901992 553 Snord98
+Pfkfb2 -0.545354000608178 0.424518477657946 -0.670346587478651 0.513427448101524 0.63926739732123 -5.99345507595512 21 Pfkfb2
+9130221H12Rik 0.493130187244428 -1.03317285995058 0.669887014710966 0.51371179596365 0.63926739732123 -6.04321414453495 6 9130221H12Rik
+Btbd19 -0.547332034034489 -1.13917247326995 -0.669797729280709 0.513767049380866 0.63926739732123 -6.0682117317532 4 Btbd19
+4930509E16Rik 0.570473767057425 -0.600743907620917 0.65989169715578 0.519918547067217 0.646216843359145 -6.02351322613687 11 4930509E16Rik
+Srsf9 -0.620398138974306 -0.299891783561682 -0.656391645137278 0.522102062684203 0.647794698934503 -5.99659806286004 14 Srsf9
+4930547E14Rik -0.479717332437278 -1.13917247326995 -0.656037147154269 0.522323508343333 0.647794698934503 -6.07735963771559 4 4930547E14Rik
+Snord92 0.328191137503612 2.71880718071066 0.648008809237884 0.527352904688381 0.653322111020024 -6.3973107671481 106 Snord92
+4930526I15Rik -0.491752882645034 -0.742931848089659 -0.643842626515511 0.529973595048547 0.655856694089363 -6.04251967943561 8 4930526I15Rik
+Rmi1 0.481912707053239 -0.63693223477029 0.642382362081087 0.53089389225232 0.656283782296747 -6.03629833075496 8 Rmi1
+E2f6 0.599323909462423 -0.393930978374138 0.639357845639497 0.532802879018816 0.656869353859217 -6.02831197673234 16 E2f6
+1190002F15Rik 0.49888080484846 -1.42941348513087 0.637507437962788 0.533972699009268 0.656869353859217 -6.09252279377585 4 1190002F15Rik
+Tsix 0.49888080484846 -1.42941348513087 0.637507437962788 0.533972699009268 0.656869353859217 -6.09252279377585 4 Tsix
+1700034H15Rik 0.543082796194865 -0.788253108012747 0.636899871034629 0.534357113785704 0.656869353859217 -6.04917319027871 7 1700034H15Rik
+Adarb1 -0.552066785536743 -0.202135098099839 -0.636790015626986 0.534426637134148 0.656869353859217 -6.00439550621409 14 Adarb1
+Gm2061 0.463825041047814 -1.39322515798149 0.636165822738289 0.534821761380555 0.656869353859217 -6.08891943947055 5 Gm2061
+G730013B05Rik -0.555071724179367 -0.202135098099839 -0.634045128592704 0.536165415013138 0.657811546806441 -6.00613726849612 14 G730013B05Rik
+Etohd2 0.50091939381951 -0.986373420602892 0.626287461136556 0.54109661778882 0.66314848646299 -6.06649536389095 6 Etohd2
+Fendrr 0.467194943660743 -1.03317285995058 0.625054288937282 0.541882799556935 0.663399435938265 -6.07231128308936 4 Fendrr
+Mir15a 0.206050012741693 7.92756591993174 0.624069296235348 0.542511213731924 0.663456907682878 -7.05700019883519 3883 Mir15a
+Mir29b-1 -0.568163238783593 -0.484133182103234 -0.613223964954576 0.549456958502096 0.670669357445426 -6.03590249794921 10 Mir29b-1
+Magix 0.459516554314059 -1.07849411987367 0.613025611681336 0.549584442779556 0.670669357445426 -6.08477332483564 5 Magix
+Ngrn 0.440449993515304 -1.03317285995058 0.608380804083763 0.552574338249185 0.672951153459094 -6.08264752161091 4 Ngrn
+Snord22 -0.33412784264152 2.12142786320235 -0.608047224549733 0.552789405985685 0.672951153459094 -6.31148705986951 69 Snord22
+1700012D14Rik 0.504465784559469 -0.182193869339848 0.606840054346948 0.553568081556802 0.672951153459094 -6.03643358657414 15 1700012D14Rik
+Malat1 0.457988929028296 4.6947660854097 0.606459872307611 0.553813438298062 0.672951153459094 -6.7660970542376 560 Malat1
+Atp10d 0.608234437022461 -0.360570136957963 0.603954383897974 0.555431872187505 0.674199751240365 -6.05088643641914 17 Atp10d
+Tk2 0.435766247183332 -0.299891783561682 0.584981614285355 0.567770032800142 0.688443791099854 -6.05317939429249 10 Tk2
+Sec23b 0.487360009845026 -0.996984532801206 0.581431884228508 0.570094526650815 0.69052850839552 -6.09488450593516 7 Sec23b
+Yaf2 0.531934801396187 -0.78261712182168 0.57958011589666 0.571309127139827 0.691265868575337 -6.08386174660212 10 Yaf2
+4930562F07Rik 0.531934801396188 -0.78261712182168 0.573556610573136 0.575269449205912 0.694633374984294 -6.08736043819879 10 4930562F07Rik
+Mir25 0.119476823021838 10.3640735387842 0.57349527419075 0.575309850447115 0.694633374984294 -7.25394152331292 19593 Mir25
+H2-T10 0.402558884087807 -1.07849411987367 0.57231748519401 0.576085928522387 0.694835142118439 -6.10908404449287 5 H2-T10
+Ndufs6 0.465406117300006 -0.646065167544005 0.565228910470871 0.580768330016121 0.69791113489181 -6.08343544608261 10 Ndufs6
+4931403G20Rik 0.396304995264058 -1.42941348513087 0.564863424364777 0.581010289039597 0.69791113489181 -6.13656822202315 4 4931403G20Rik
+Gm4265 0.396304995264058 -1.42941348513087 0.564863424364777 0.581010289039597 0.69791113489181 -6.13656822202315 4 Gm4265
+Dnm1l 0.596675525388084 -0.10266422962704 0.564648152710883 0.581152827607449 0.69791113489181 -6.06110568505703 26 Dnm1l
+1600020E01Rik -0.428368836775209 -1.24517208658932 -0.562576463668063 0.582525489062561 0.69791113489181 -6.14310756515597 4 1600020E01Rik
+B230319C09Rik -0.413970740406424 -1.03317285995058 -0.56081648487133 0.583692934466204 0.69791113489181 -6.12332847161404 4 B230319C09Rik
+C230091D08Rik 0.570836755523839 -0.373872894349982 0.560787405184822 0.583712234019791 0.69791113489181 -6.07595261398833 17 C230091D08Rik
+Gm12216 0.527434247362 -0.218382196489221 0.560377655595617 0.583984210925728 0.69791113489181 -6.06856161202066 14 Gm12216
+Myeov2 0.3752456737319 -1.07849411987367 0.560141154452764 0.584141221579034 0.69791113489181 -6.11604668250071 5 Myeov2
+2610035D17Rik -0.409572508644584 -1.03317285995058 -0.557270792901514 0.586048560018765 0.699024554798309 -6.12533252351616 4 2610035D17Rik
+Gm10433 -0.411910596355978 -1.03317285995058 -0.556895131904771 0.586298421509187 0.699024554798309 -6.12554413845499 4 Gm10433
+Sfpq 0.534329997707399 0.889926201599616 0.555891096710229 0.586966499094674 0.69909057981944 -6.11137785471773 42 Sfpq
+1700011J10Rik 0.529021416706896 0.170420802222486 0.543067267793 0.595533596473573 0.708554570986806 -6.06705821666725 22 1700011J10Rik
+1700086O06Rik 0.427757523649846 0.607281696774899 0.539835103869891 0.597702825758803 0.709892527729479 -6.0911847020693 26 1700086O06Rik
+Rbm7 0.453647315238698 -0.171582757141534 0.539018521642786 0.598251494919921 0.709892527729479 -6.07445491272463 14 Rbm7
+2410137F16Rik 0.346588847488861 -0.941052160679803 0.538612144779345 0.598524637752637 0.709892527729479 -6.12117886037737 5 2410137F16Rik
+Snord1b 0.327856599452274 1.28882447100627 0.522934546604764 0.609109798041057 0.721697071199217 -6.18918715059754 37 Snord1b
+Scarna8 0.41857211258756 -0.498012096151827 0.514323740288517 0.614962686208841 0.727875959506523 -6.10050180568233 9 Scarna8
+8430429K09Rik 0.414916540751085 -0.788253108012747 0.512906371671284 0.615928717589278 0.728263903387944 -6.12271326702371 11 8430429K09Rik
+Fbxo34 0.40198566998122 0.1102277556672 0.509352622996849 0.618354078512004 0.730374744909107 -6.08031249836236 15 Fbxo34
+Gm12238 0.450619994317534 0.827986746000388 0.506098398216102 0.620579073491806 0.73224480129695 -6.13049162033361 32 Gm12238
+Abhd10 -0.374596139874294 -0.63693223477029 -0.499427866618794 0.625151920071888 0.736262362403135 -6.11479367410621 6 Abhd10
+Gm6793 0.389273388584781 -1.03317285995058 0.498559841769692 0.625748160602701 0.736262362403135 -6.14405724031514 6 Gm6793
+Gm6225 0.46855445481597 -0.833574367935836 0.498310037608462 0.625919799764278 0.736262362403135 -6.13203165562082 8 Gm6225
+Gm15545 -0.330712612254716 -1.03317285995058 -0.495988985275263 0.627515656816932 0.736611523333955 -6.15804139536778 4 Gm15545
+Gm11747 0.335098793325209 -0.0096507717007621 0.495972744971373 0.627526829783269 0.736611523333955 -6.08743592777084 12 Gm11747
+Mir423 -0.173689502560178 8.7519993946383 -0.492479800459781 0.629932094687387 0.736611523333955 -7.19207867477127 6997 Mir423
+Snora43 -0.378883433040629 -0.788253108012747 -0.492233452418481 0.63010189641288 0.736611523333955 -6.13378146663089 7 Snora43
+2610027K06Rik 0.418297137532964 -0.478497195912167 0.491895430681986 0.630334921865253 0.736611523333955 -6.11191956714245 11 2610027K06Rik
+Mir147 -0.328652468204269 -1.03317285995058 -0.491676373837183 0.630485957074276 0.736611523333955 -6.16020521199643 4 Mir147
+Gm5095 -0.324568459168512 -1.03317285995058 -0.490626195985013 0.631210270949685 0.736611523333955 -6.16072936854254 4 Gm5095
+Gm9776 0.388741227193178 -0.941052160679803 0.490378296979785 0.631381305714819 0.736611523333955 -6.1463267385683 7 Gm9776
+Snord110 0.129319486094622 7.41597550306118 0.48578283224498 0.634555843906532 0.739197500965227 -7.09884262072819 2471 Snord110
+Mir30c-2 0.137775378234264 6.42581414345931 0.485294592286323 0.634893559111238 0.739197500965227 -7.01980953500918 1345 Mir30c-2
+4930555B11Rik 0.2949397151298 1.99987508225673 0.483042377674677 0.636452504372091 0.740257194177937 -6.35317786250865 61 4930555B11Rik
+Mir667 -0.391305201966948 -0.848931461409027 -0.475887236012698 0.641417003923651 0.745271691931656 -6.14780781181069 6 Mir667
+A930015D03Rik 0.376646313021944 0.514898879899676 0.473277554456916 0.643232148337921 0.745696184804009 -6.11541875955504 22 A930015D03Rik
+Mir148b -0.096502203766917 9.5098882524752 -0.472634911746632 0.643679496834764 0.745696184804009 -7.2530384831483 10703 Mir148b
+Mir5114 -0.355477405873343 -0.848931461409028 -0.472543728748277 0.643742981623093 0.745696184804009 -6.14941854830243 6 Mir5114
+Gm11696 0.385891117774572 -1.07849411987367 0.464554766915719 0.649316322766449 0.751389375533994 -6.1657021159416 5 Gm11696
+Mir3473 -0.35240146171116 -0.63693223477029 -0.461057879770776 0.651762750418594 0.752701819182497 -6.13347427347714 6 Mir3473
+6330549D23Rik -0.331449829799571 -0.254570523638594 -0.461047742280118 0.651769848687385 0.752701819182497 -6.10197272310564 9 6330549D23Rik
+2810001G20Rik -0.295155201235964 -1.24517208658932 -0.455859206316244 0.655407440132046 0.756137400597235 -6.19832965924427 4 2810001G20Rik
+Plscr3 -0.307745114670155 -1.03317285995058 -0.449268914134516 0.660040873119404 0.760713773968929 -6.18050852643307 4 Plscr3
+Mir130a 0.0948947867813811 9.53816266066212 0.446663133142086 0.661876928287154 0.762060116221638 -7.26729031205233 11048 Mir130a
+Scarna2 0.402232211609843 0.691735624844723 0.442282244736368 0.664968822143442 0.764848211759745 -6.14647900407425 32 Scarna2
+A430071A18Rik -0.354071454044044 -1.24517208658932 -0.433473215739963 0.671205080288204 0.770467803429417 -6.20849188803248 4 A430071A18Rik
+Cd22 -0.354071454044044 -1.24517208658932 -0.433473215739963 0.671205080288204 0.770467803429417 -6.20849188803248 4 Cd22
+Neat1 0.312359287225155 1.92594411218741 0.430272777772821 0.673477061033794 0.772298820743276 -6.36297140623657 65 Neat1
+Rhno1 -0.354071454044043 -1.24517208658932 -0.428356577421971 0.674838950443228 0.773083576762774 -6.21074475219862 4 Rhno1
+4930426L09Rik 0.280363052731611 -1.13917247326995 0.425550041422787 0.676835754994839 0.774593376578848 -6.19000059303377 4 4930426L09Rik
+Mdp1 -0.32178107969573 -0.848931461409027 -0.424206744137332 0.677792382558126 0.774910930359541 -6.17147301088386 6 Mdp1
+Mir5100 0.286079733326491 0.406104753719187 0.421137469236957 0.679980324136049 0.776133988892759 -6.12996948354496 18 Mir5100
+5430417L22Rik 0.279090327370704 -1.13917247326995 0.420797856848568 0.680222602009429 0.776133988892759 -6.19205319731848 4 5430417L22Rik
+4930568G15Rik 0.325447035573598 -1.07849411987367 0.415950309958232 0.683684799051212 0.779205515291919 -6.18750841807313 5 4930568G15Rik
+Adck5 0.296209487894226 -0.742931848089659 0.415117444464695 0.684280391167838 0.779205515291919 -6.1642627433001 6 Adck5
+A230020J21Rik -0.305089019444194 -0.452690836228738 -0.412631263938286 0.686059583143688 0.780372490447987 -6.13714270799574 8 A230020J21Rik
+3110056K07Rik 0.321778367105555 -0.544811535499514 0.411774615698607 0.686673076608045 0.780372490447987 -6.15031511044177 9 3110056K07Rik
+Mtf2 -0.351812353895571 -0.349382868103075 -0.407554645656379 0.689698567236507 0.783030910663537 -6.13041218971925 15 Mtf2
+BB123696 0.260421273935177 -1.13917247326995 0.404926598716839 0.691585522829203 0.784392725196939 -6.19874553892436 4 BB123696
+Irf3 0.298133825217692 -1.07849411987367 0.396206543932785 0.697861753754696 0.790725184740922 -6.19569620036444 5 Irf3
+Mir18 -0.210024487848092 2.16031654478057 -0.393337083693313 0.699932088731125 0.792284239327593 -6.42958083480241 62 Mir18
+Khdrbs1 0.267969897244776 -0.742931848089659 0.386850701364717 0.704621159953094 0.796801529738831 -6.17582087837821 6 Khdrbs1
+E030003E18Rik 0.292822130692984 -0.727574754616467 0.377280776298752 0.711562098861472 0.803190169478922 -6.17832119950389 8 E030003E18Rik
+9530052E02Rik 0.240241697353475 0.0356704882223265 0.376911575171499 0.71183041230099 0.803190169478922 -6.13775517192755 11 9530052E02Rik
+F420014N23Rik 0.382817630756644 -0.117306762957363 0.375641100841847 0.712754019798555 0.803190169478922 -6.1456273280473 22 F420014N23Rik
+Mir5129 -0.298231732945833 -0.452690836228738 -0.375183978987274 0.713086451956309 0.803190169478922 -6.15215700511858 8 Mir5129
+Mir219-1 0.176264413953521 2.53670005639744 0.373534816743211 0.714286272130486 0.803748162229669 -6.50734777259605 90 Mir219-1
+Mir872 0.111217220149994 5.81048191699923 0.367908518024425 0.718385472265704 0.807166686595139 -7.01869601020665 859 Mir872
+Snhg9 -0.314719071095367 0.412167068430586 -0.365994199209784 0.719782263529738 0.807166686595139 -6.14978861932683 22 Snhg9
+Snora78 -0.314719071095367 0.412167068430586 -0.365994199209784 0.719782263529738 0.807166686595139 -6.14978861932683 22 Snora78
+Orc4 0.297794064812266 -0.544811535499514 0.36548500236509 0.720153976296101 0.807166686595139 -6.16865012392074 9 Orc4
+Dnajc24 0.266599549793499 -0.558690449548107 0.354534559090483 0.728165394656301 0.815345157313876 -6.17320373339602 8 Dnajc24
+6720483E21Rik 0.289583824911831 -0.147092730894626 0.350649982201204 0.731015369891102 0.817733859848772 -6.15445263472245 12 6720483E21Rik
+2310001K24Rik -0.24591482502991 -1.03317285995058 -0.345230837127148 0.734998083052978 0.821383753930899 -6.22275270624135 4 2310001K24Rik
+Alg9 0.309421795900789 -0.676617508502311 0.343236944974775 0.736465460344019 0.822218287918323 -6.18698179945559 10 Alg9
+Snora81 -0.326932802874368 0.0115007762338971 -0.341850898914962 0.737486130537647 0.822552956933974 -6.14759719106399 22 Snora81
+BB283400 -0.279424707462514 -1.03317285995058 -0.340367255810976 0.738579239356336 0.822967687603104 -6.22446215814992 6 BB283400
+Mir466d 0.248413625738754 -1.13917247326995 0.320824573653718 0.753031659736241 0.838252803667367 -6.2299984743374 4 Mir466d
+Mir10a 0.0951038511256634 14.8586469353474 0.311728572155646 0.759791705201772 0.844953543504115 -7.67496459069947 435679 Mir10a
+Gm4890 -0.220857818504799 -1.24517208658932 -0.310290622719027 0.760862255053954 0.845320187942124 -6.25544681917468 4 Gm4890
+6720401G13Rik 0.289187406074058 -1.11660094256472 0.307349482960207 0.763053506555847 0.84693001068115 -6.23186816538886 9 6720401G13Rik
+5430402O13Rik -0.217791204402388 -1.24517208658932 -0.304855090219651 0.764913568480844 0.847346001588973 -6.25716634200865 4 5430402O13Rik
+Gm6297 -0.217791204402388 -1.24517208658932 -0.304855090219651 0.764913568480844 0.847346001588973 -6.25716634200865 4 Gm6297
+Mir877 -0.206666454163989 1.57934953392826 -0.297694706970739 0.77026137051895 0.852442506073833 -6.34009404640788 45 Mir877
+Nol8 0.264698853020979 -0.386376496641391 0.293585635346632 0.7733357709552 0.855015614980507 -6.18259191534761 14 Nol8
+Snord58b 0.282727046691085 4.4176355838932 0.288358932677936 0.777252081328622 0.858513673568207 -6.87726871780058 394 Snord58b
+Gm10785 -0.210547737676215 -1.07849411987367 -0.283356828799375 0.781005991911092 0.861118429107723 -6.24760352460985 7 Gm10785
+1110019D14Rik -0.222492569746086 -0.941052160679803 -0.283205434775104 0.781119696868092 0.861118429107723 -6.23175173996211 5 1110019D14Rik
+2010320M18Rik 0.206496077148502 -0.299891783561682 0.277852680238545 0.785143217405954 0.864718543494396 -6.18149015495467 10 2010320M18Rik
+Ccdc11 0.204900539151867 -1.13917247326995 0.274068094032085 0.787991843292579 0.866356392494407 -6.24428661528185 4 Ccdc11
+Zfp821 -0.202147777847892 -1.24517208658932 -0.273859508838947 0.788148935503238 0.866356392494407 -6.26639816102087 4 Zfp821
+Rtel1 0.201978478856495 -1.13917247326995 0.269324663439279 0.791566624557495 0.869275763830705 -6.24561211960019 4 Rtel1
+Cyp4f41-ps 0.196688936671879 -1.04705177399917 0.266646009723831 0.793587488192855 0.870657042334661 -6.24445495366917 5 Cyp4f41-ps
+Gm10033 0.211295954535854 -0.798864220211061 0.265102653487238 0.794752545801563 0.870977274346489 -6.2215520620046 10 Gm10033
+Gm15713 -0.213339795720713 -0.788253108012747 -0.264237229142785 0.795406064740615 0.870977274346489 -6.22144581162811 7 Gm15713
+9930014A18Rik 0.202831120802033 -0.590132795422603 0.261795875496793 0.797250491951153 0.872159934147906 -6.20377372854167 8 9930014A18Rik
+4930429F24Rik -0.235017737171845 -0.590132795422603 -0.260029712720504 0.798585600641395 0.872783688057311 -6.20264241644327 8 4930429F24Rik
+Slc12a4 0.197276741970114 -0.590132795422603 0.255487613570678 0.802022135394515 0.875700723909226 -6.2054471610575 8 Slc12a4
+Dos 0.183309425420969 -1.13917247326995 0.253065969585285 0.803856084462768 0.876864046244759 -6.24998160826913 4 Dos
+Gm3086 0.181314808962686 -1.13917247326995 0.250796184607887 0.805576116449452 0.877901001784933 -6.25057017845262 4 Gm3086
+Svip -0.191457734911026 -1.13917247326995 -0.248964250053628 0.806965109263563 0.878457915019561 -6.26035672094373 4 Svip
+4930467D21Rik 0.181314808962687 -1.13917247326995 0.248091662395482 0.807626952546468 0.878457915019561 -6.25126461835207 4 4930467D21Rik
+Peg13 -0.205451957492413 -0.392012482832458 -0.240462116640139 0.813420288672865 0.88391671369118 -6.19004292428062 11 Peg13
+Pafah1b1 0.213436895760378 1.10038900250084 0.237624832608292 0.815577632686837 0.885417772498269 -6.26459265250452 40 Pafah1b1
+Snord88a -0.0731689826617632 5.35276818255428 -0.231022702481669 0.820603573853006 0.890027260234107 -7.01600278328706 589 Snord88a
+Mir451 -0.0611495321193691 10.5875987299641 -0.22852689183222 0.822505679316192 0.891243096011182 -7.41440171692514 23834 Mir451
+Gm7367 -0.156676018697354 -0.941052160679803 -0.22725891434218 0.823472473631732 0.891444110449532 -6.24643601325685 5 Gm7367
+4921511C10Rik 0.182682113759512 -0.788253108012747 0.224188388947209 0.825814884315388 0.893132495738253 -6.23070631729261 7 4921511C10Rik
+Rmrp 0.0655095097323271 7.670330005123 0.217766244863006 0.830719680954736 0.897584295976066 -7.21766694613943 3178 Rmrp
+Ufd1l 0.195771351763775 -1.16497883295338 0.216430843996505 0.831740495954836 0.897584295976066 -6.26197687991093 7 Ufd1l
+Snord70 0.10221174934082 2.60861620211668 0.21571068481477 0.832291135094371 0.897584295976066 -6.57150704500313 92 Snord70
+Mrpl15 0.14880859252168 0.33979041413184 0.210945385298102 0.835937006061044 0.900604863671905 -6.19219624410467 16 Mrpl15
+Prmt1 0.168995528929063 -0.61462282166951 0.209987168816182 0.836670600781962 0.900604863671905 -6.21815488399073 10 Prmt1
+Dio3os -0.170981896180084 -0.360570136957963 -0.203892664909895 0.841340111913074 0.904777632132722 -6.19710106994991 9 Dio3os
+Mir5122 0.137338174750326 0.909823171643444 0.202469317623695 0.842431557085991 0.905098311332501 -6.24373086611934 25 Mir5122
+AF357426 0.146994795882059 -0.925695067206612 0.198977007139408 0.845110934201941 0.907122837181952 -6.25084617139261 7 AF357426
+Mir1940 -0.125092164153929 -0.148570910319225 -0.197867539305057 0.845962560042597 0.907183534782522 -6.18834145281798 9 Mir1940
+Zmynd8 -0.133555302246356 1.10038900250084 -0.196079492196291 0.847335481986915 0.907736573107103 -6.27212529839997 30 Zmynd8
+Rit1 0.164276960637274 -0.742931848089659 0.19512393531283 0.848069401342832 0.907736573107103 -6.2329898157428 8 Rit1
+A330093E20Rik -0.166436728635281 -0.529454442026323 -0.193988877004694 0.848941377328815 0.907818286346933 -6.21302114126874 9 A330093E20Rik
+Zc3h7a -0.166703851628381 4.97783950558816 -0.189789214512805 0.852169421422477 0.910416956781879 -6.97955880875527 754 Zc3h7a
+Ftx 0.0504324766144679 6.86722045285186 0.186700290456373 0.854545461173525 0.911489026597255 -7.16164366317441 1746 Ftx
+C730002L08Rik -0.131614117041705 -0.941052160679803 -0.186271197576372 0.854875641216881 0.911489026597255 -6.25516561907766 5 C730002L08Rik
+4930583K01Rik -0.148007765096514 -0.742931848089659 -0.185369656315026 0.855569454413374 0.911489026597255 -6.2348331965382 6 4930583K01Rik
+Snord61 0.0907359318616479 3.7128223821274 0.180846592738436 0.859052196853419 0.914286401155283 -6.78522682866309 233 Snord61
+Fam214b 0.16820554523756 -0.193892170242314 0.179683525243946 0.859948249575887 0.914286401155283 -6.2001202438586 12 Fam214b
+Nnt -0.179572835568388 2.32886502522719 -0.178838866016564 0.860599119054141 0.914286401155283 -6.52700074446877 121 Nnt
+Rbmx 0.0865169681824078 3.76765216278315 0.174526413007477 0.863923795040316 0.916964697805581 -6.796283925268 240 Rbmx
+4930473A02Rik 0.109648341099376 -1.04705177399917 0.164042278471314 0.872017542480434 0.924695182128416 -6.267217819505 5 4930473A02Rik
+1110002L01Rik -0.117583232855061 -1.27661443246381 -0.15904757936708 0.875878740745282 0.926998609682585 -6.28744474569536 4 1110002L01Rik
+Snora34 0.113255539654068 0.926496598553157 0.158111032892598 0.87660311478273 0.926998609682585 -6.25496403965504 26 Snora34
+Mir1306 -0.0980764865609146 0.590346152260739 -0.157138454831744 0.877355478875916 0.926998609682585 -6.21667496967709 20 Mir1306
+Fance -0.140169830118825 -1.13917247326995 -0.156010049757285 0.878228541143718 0.926998609682585 -6.27977120680639 6 Fance
+Snora47 0.0984116028006845 0.141670101541695 0.15597977243771 0.878251969383764 0.926998609682585 -6.19661177976075 13 Snora47
+9330020H09Rik -0.118716898832216 -0.880373807283523 -0.15161129600864 0.881633474249955 0.928922046091183 -6.25469072285892 6 9330020H09Rik
+Ppargc1a 0.131863677613015 0.0735991124007457 0.151522129473541 0.881702520523007 0.928922046091183 -6.1971928092207 18 Ppargc1a
+Ccdc77 0.125473874965672 -0.788253108012747 0.147530169260755 0.884794715485482 0.931319898864331 -6.24537213273817 7 Ccdc77
+Gm16291 -0.137648313668149 -0.0655831438221648 -0.145738917274025 0.886182865432267 0.93192133590619 -6.19632184114116 14 Gm16291
+4930527F14Rik -0.115142188483818 -1.13917247326995 -0.142774358438664 0.888481131158281 0.932061058543482 -6.28181384714649 4 4930527F14Rik
+Cnot2 0.138596259908812 -0.0491775771623832 0.142715474719377 0.888526791198434 0.932061058543482 -6.19956411508142 21 Cnot2
+Gm16039 0.0860006893041729 0.989643407906595 0.141187247205111 0.889711963452007 0.932061058543482 -6.26618211598301 27 Gm16039
+1700007J10Rik -0.113205756535242 -0.788253108012747 -0.140564172695348 0.890195249337243 0.932061058543482 -6.24719705198026 7 1700007J10Rik
+Nup88 -0.124975737193874 -0.239213430165402 -0.139113735537381 0.891320451556099 0.932061058543482 -6.20078805666017 15 Nup88
+Mir1946b -0.11008548363065 0.157027195014887 -0.13736714896008 0.892675718878866 0.932061058543482 -6.19984394272254 15 Mir1946b
+Mirlet7g 0.0395844887395015 11.1837033910963 0.136145707336603 0.893623705801407 0.932061058543482 -7.47148737731621 38152 Mirlet7g
+Gm10548 -0.0899680772947313 -0.34669122290937 -0.136099070118153 0.89365990529298 0.932061058543482 -6.20842396396051 8 Gm10548
+1810034E14Rik -0.075352723109679 2.06893973454929 -0.136089081740893 0.893667658235381 0.932061058543482 -6.48017984570887 64 1810034E14Rik
+4931440J10Rik 0.0849667984841879 0.325911500083247 0.126806897573872 0.900877218801809 0.938600049942131 -6.20615379472686 15 4931440J10Rik
+D330022K07Rik -0.101032157727657 1.65698316208093 -0.125899476060991 0.901582519488672 0.938600049942131 -6.39470229837695 56 D330022K07Rik
+C330013E15Rik -0.103267266578104 -0.742931848089659 -0.124450397809002 0.90270900568535 0.938916112567898 -6.24455208288828 8 C330013E15Rik
+5930430L01Rik 0.136225847581219 -0.214062543734675 0.119769549531324 0.906349281099135 0.941260828400483 -6.20916672317144 18 5930430L01Rik
+Mir496 0.0950067476259783 -0.0703291250970423 0.119430311967314 0.90661319054525 0.941260828400483 -6.20237905877004 13 Mir496
+Mir669a-1 -0.0874831731028778 0.143148280966294 -0.118249227240961 0.907532102973484 0.941358299538859 -6.20192887859536 14 Mir669a-1
+Thap6 -0.0878168955885893 -0.558690449548107 -0.115414375847903 0.909738243408161 0.942789587401192 -6.2280381796423 8 Thap6
+Chpt1 -0.127661446694368 0.920094239341047 -0.11067734520755 0.913426413354199 0.945752756476534 -6.25776602096988 61 Chpt1
+Mir101a 0.0244432527205966 10.3082648606422 0.106757481268119 0.916479919716901 0.948054023931989 -7.4177003681481 19692 Mir101a
+E130102H24Rik 0.0240283211557467 10.3090843068977 0.10496799166705 0.917874358796149 0.94863645234276 -7.4179565369203 19702 E130102H24Rik
+Mir425 0.033427373456698 6.66465089052376 0.101272505699857 0.920754905156141 0.950345151621533 -7.15835044873542 1583 Mir425
+Mir362 -0.0544522631314578 3.35231486548691 -0.100710009948844 0.921193459854001 0.950345151621533 -6.73276860148804 169 Mir362
+Mir17 0.0294271489414047 5.12380283689553 0.0952058023213346 0.925486243109504 0.953911294840058 -7.01165582330098 534 Mir17
+E230016M11Rik -0.0696354231248524 -0.941052160679803 -0.0918911504840257 0.928072541539687 0.955713691242584 -6.26870805660384 5 E230016M11Rik
+Chkb 0.0776691859878007 0.62903919856468 0.0899505655256887 0.929587100348321 0.956253428651282 -6.22872128912026 28 Chkb
+Arhgap1 0.0966234721391633 -0.198705450261483 0.0890720608925429 0.930272835935954 0.956253428651282 -6.21090676133964 18 Arhgap1
+2610002J02Rik -0.0573974454417385 -0.742931848089659 -0.0830721604333289 0.93495769271309 0.959921241425124 -6.24897822876549 6 2610002J02Rik
+4921531C22Rik -0.0635851168193281 -0.941052160679803 -0.0822890634566592 0.93556934061789 0.959921241425124 -6.26957168238787 5 4921531C22Rik
+Srsf7 0.0705092857951172 -0.798864220211061 0.0812705943953252 0.936364891942299 0.959921241425124 -6.25432076732456 8 Srsf7
+1700020I14Rik 0.0749473297339094 0.656660491848086 0.0792648453094152 0.937931837290533 0.960664476075851 -6.23371457269478 32 1700020I14Rik
+2210015D19Rik 0.0647102732837292 -1.23129317254072 0.0766096103443329 0.940006587546541 0.961787864403415 -6.29126291736405 5 2210015D19Rik
+4732416N19Rik 0.0594207089292347 -0.239213430165402 0.0757037539631176 0.940714510669773 0.961787864403415 -6.21193843190686 11 4732416N19Rik
+Mir4660 0.0657262988065859 0.507946560272087 0.0713313665087823 0.944132233479521 0.964417975291077 -6.22141853049579 26 Mir4660
+Mir5113 0.0484940420860439 -0.452690836228738 0.0682297423584027 0.946557346616918 0.966030351064315 -6.22526905240972 8 Mir5113
+E530011L22Rik -0.0404713843408522 -1.27661443246381 -0.0613724386888617 0.951920883212834 0.970284520587158 -6.29857782441741 4 E530011L22Rik
+Gm15441 0.0426104096369733 1.51577639605449 0.0604630248332405 0.952632381396158 0.970284520587158 -6.37051029075163 43 Gm15441
+Fam172a 0.0503754462959195 0.409161384184755 0.0596392630819191 0.953276904100091 0.970284520587158 -6.21618388102567 23 Fam172a
+Rbm18 -0.0538668143348915 -0.299891783561682 -0.0557642901053547 0.956309184092742 0.972503368137093 -6.21475268708383 12 Rbm18
+Gm12191 -0.0354587706805078 -0.880373807283523 -0.0497068478436261 0.961050697355324 0.975480839012736 -6.26527518040501 6 Gm12191
+Rprl3 0.0408471478447264 -0.798864220211061 0.0488367850296659 0.961731876147215 0.975480839012736 -6.25649782741468 8 Rprl3
+H19 -0.0415019911233814 -0.880373807283523 -0.0480992443304892 0.962309326654761 0.975480839012736 -6.26535636348749 6 H19
+Ppifos -0.045813233148843 -0.325698143245111 -0.047655434486338 0.962656813959983 0.975480839012736 -6.21600758126971 15 Ppifos
+Mirlet7a-2 -0.0146726577509692 3.37472927372453 -0.0386745178686727 0.969690141624003 0.981735981892624 -6.74139737131634 158 Mirlet7a-2
+9530082P21Rik -0.027891459987058 -1.27661443246381 -0.0346374807689275 0.972852600944678 0.983192929741255 -6.29990631175915 4 9530082P21Rik
+Mir1196 -0.027891459987058 -1.27661443246381 -0.0346374807689275 0.972852600944678 0.983192929741255 -6.29990631175915 4 Mir1196
+Kcnk2 -0.0253403588431765 -0.835052547360434 -0.031369255395874 0.975413152136616 0.984908324414052 -6.26109829686273 7 Kcnk2
+A930011G23Rik -0.0241809579465951 -0.00965077170076215 -0.0291709235913898 0.977135635463562 0.985775207837245 -6.2074206456237 12 A930011G23Rik
+Mir3103 0.0180714470554271 -1.13917247326995 0.0259355368025229 0.979670906552206 0.987459809519494 -6.2920042186438 4 Mir3103
+Snora75 -0.0172327656019052 -0.590132795422603 -0.021476287065286 0.983165572405378 0.989793060148976 -6.23767380603265 10 Snora75
+4930414L22Rik -0.0152743869054217 -0.484133182103234 -0.0207679670021376 0.983720710086713 0.989793060148976 -6.22874423282067 8 4930414L22Rik
+Mipep 0.0164012673799433 -0.280376883322022 0.0179445082376201 0.985933647271923 0.991145631310365 -6.21618933242714 14 Mipep
+Ippk -0.0101933209515463 0.0857377294202925 -0.0128542290662295 0.989923536727642 0.99288598158411 -6.20831119150974 15 Ippk
+Mir598 -0.00787301950188535 1.52736379718861 -0.0127956250729132 0.989969473858512 0.99288598158411 -6.3747989571524 44 Mir598
+1500017E21Rik 0.0125149432592357 0.202348454937975 0.0124053255048405 0.990275413709656 0.99288598158411 -6.21004071500431 20 1500017E21Rik
+Map1lc3a 0.00968300434227123 0.00717248334519302 0.0097742078067436 0.992337878036726 0.994080350166729 -6.20806203375241 21 Map1lc3a
+Trappc13 -0.00465914834988075 -0.880373807283523 -0.00622703745231414 0.995118499154886 0.995991410119056 -6.26653097741332 6 Trappc13
+Mir1966 -0.00246570556544304 -0.590132795422603 -0.00337044327478241 0.997357828291427 0.997357828291427 -6.23790561933129 8 Mir1966
diff -r 5b6af671d985 -r 8051d14cf819 test-data/gentestdata.sh
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/gentestdata.sh Sun Dec 22 01:32:29 2013 -0500
@@ -0,0 +1,9 @@
+#!/bin/bash
+# generate test data for rgGSEA
+# ross lazarus June 2013
+# adjust gseajar_path !
+GSEAJAR_PATH=/home/rlazarus/galaxy-central/tool_dependency_dir/gsea_jar/2.0.12/fubar/rg_gsea_test/8e291f464aa0/jars/gsea2-2.0.12.jar
+python ../rgGSEA.py --input_tab "gsea_test_DGE.xls" --adjpvalcol "5" --signcol "2" --idcol "1" --outhtml "gseatestout.html" --input_name "gsea_test" --setMax "500" --setMin "15" --nPerm "10" --plotTop "20" --gsea_jar "$GSEAJAR_PATH" --output_dir "gseatestout" --mode "Max_probe"
+--title "GSEA test" --builtin_gmt "gseatestdata.gmt"
+
+
diff -r 5b6af671d985 -r 8051d14cf819 test-data/test_bams2mx.xls
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/test_bams2mx.xls Sun Dec 22 01:32:29 2013 -0500
@@ -0,0 +1,3243 @@
+Contigname 11706Liv_CAAAAG_L003_R1_001_trimmed.fastq_bwa.sam.bam 11706He_AGTTCC_L001_R1_001_trimmed.fastq_bwa.sam.bam 11699He_GGCTAC_L001_R1_001_trimmed.fastq_bwa.sam.bam 11698He_TAGCTT_L001_R1_001_trimmed.fastq_bwa.sam.bam 11700Liv_ATTCCT_L003_R1_001_trimmed.fastq_bwa.sam.bam 11698Liv_ACTGAT_L003_R1_001_trimmed.fastq_bwa.sam.bam 11699Liv_ATGAGC_L003_R1_001_trimmed.fastq_bwa.sam.bam 11700He_CTTGTA_L001_R1_001_trimmed.fastq_bwa.sam.bam
+0610005C13Rik 40 0 2 0 6 70 6 2
+0610007N19Rik 10 17 11 42 2 6 6 10
+0610008F07Rik 16 0 0 0 8 5 4 1
+0610009B14Rik 0 0 0 1 0 0 0 0
+0610009L18Rik 3 2 2 11 0 1 1 1
+0610012G03Rik 6 0 0 0 4 5 2 0
+0610031O16Rik 33 0 0 0 10 25 10 0
+0610038B21Rik 0 0 0 2 0 0 0 0
+0610038L08Rik 0 0 0 0 0 3 0 0
+0610039K10Rik 9 0 0 1 3 1 4 3
+0610040B10Rik 0 0 0 0 0 0 2 0
+0610040F04Rik 2 1 0 1 2 5 2 0
+0610043K17Rik 9 2 0 4 4 12 0 1
+1110002L01Rik 3 1 0 0 0 0 0 0
+1110006O24Rik 0 0 0 1 0 0 0 0
+1110015O18Rik 0 0 0 0 0 0 0 0
+1110017D15Rik 0 0 0 0 0 2 0 0
+1110019D14Rik 1 1 1 0 0 0 2 0
+1110020A21Rik 2 0 0 2 0 2 6 0
+1110028F11Rik 0 0 0 0 0 0 0 0
+1110028F18Rik 0 0 0 0 0 0 0 0
+1110035M17Rik 0 0 0 0 0 0 0 1
+1110036E04Rik 0 0 0 0 0 0 0 0
+1110038B12Rik 9406 1346 1212 1600 7604 6486 8084 1328
+1110046J04Rik 0 0 0 0 0 0 0 1
+1110054M08Rik 6 1 0 1 0 6 1 1
+1190002F15Rik 0 0 0 0 0 4 0 0
+1300002E11Rik 10 1 0 0 0 17 0 0
+1300015D01Rik 0 0 0 0 1 2 0 0
+1500002O10Rik 0 0 0 0 0 0 0 0
+1500004A13Rik 0 0 0 0 0 0 0 0
+1500009C09Rik 0 0 0 0 0 0 0 0
+1500011B03Rik 0 0 0 0 1 0 0 0
+1500011K16Rik 0 0 0 1 0 4 2 0
+1500012K07Rik 0 0 0 0 0 0 0 0
+1500015A07Rik 0 0 0 0 0 0 0 0
+1500015L24Rik 2 0 0 0 0 2 0 0
+1500016L03Rik 0 0 0 0 0 0 0 0
+1500017E21Rik 4 1 3 0 0 7 1 4
+1600002D24Rik 0 0 1 2 0 2 0 2
+1600010M07Rik 0 0 0 0 0 0 0 0
+1600019K03Rik 0 0 0 0 0 0 0 0
+1600020E01Rik 2 0 0 0 0 0 0 2
+1600023N17Rik 0 0 0 0 0 0 1 0
+1600025M17Rik 0 0 0 0 0 0 0 0
+1600029I14Rik 1 0 0 0 0 0 0 0
+1600029O15Rik 0 0 0 0 0 0 0 0
+1700001D01Rik 0 0 0 0 0 0 0 1
+1700001G11Rik 0 0 0 0 0 0 0 0
+1700001G17Rik 1 0 0 0 0 0 0 1
+1700001J11Rik 0 0 0 0 0 0 0 0
+1700001K23Rik 0 0 0 0 0 0 0 0
+1700001L05Rik 6 0 0 0 0 6 4 0
+1700001O22Rik 0 0 0 0 0 0 0 0
+1700003C15Rik 0 0 0 0 0 0 0 0
+1700003D09Rik 1 0 0 0 0 1 0 0
+1700003F17Rik 1 2 1 4 0 2 0 6
+1700003G13Rik 0 0 0 0 0 0 0 0
+1700003G18Rik 2 0 0 1 0 0 0 0
+1700003H04Rik 0 0 0 0 0 0 0 0
+1700003L19Rik 0 5 4 12 0 0 0 2
+1700003M07Rik 0 0 0 0 0 0 0 0
+1700003P14Rik 0 0 0 0 0 0 0 0
+1700006F04Rik 0 0 0 0 0 0 0 0
+1700006H21Rik 0 0 0 0 0 0 0 0
+1700007F19Rik 0 0 0 0 0 0 0 0
+1700007J10Rik 0 0 0 2 1 3 0 1
+1700007L15Rik 0 0 0 0 0 0 1 0
+1700007P06Rik 0 0 0 0 0 0 0 0
+1700008J07Rik 4 0 0 0 1 0 3 1
+1700008K24Rik 0 0 0 0 0 0 0 0
+1700009C05Rik 0 0 0 1 0 0 0 0
+1700009J07Rik 0 0 0 0 0 0 0 0
+1700010I02Rik 0 0 0 0 0 0 0 0
+1700010J16Rik 0 0 0 0 0 0 0 0
+1700010K23Rik 0 0 0 0 0 0 0 0
+1700011B04Rik 0 0 0 0 0 0 0 0
+1700011J10Rik 1 2 0 2 9 0 7 1
+1700011M02Rik 0 0 0 0 0 0 0 0
+1700012B15Rik 7 0 0 0 2 8 1 1
+1700012D01Rik 1 1 1 0 1 2 1 0
+1700012D14Rik 5 0 0 5 2 2 0 1
+1700012I11Rik 0 2 0 0 0 0 0 0
+1700013G23Rik 0 0 0 0 0 0 0 0
+1700016G22Rik 0 0 0 0 0 0 0 0
+1700016L04Rik 0 0 0 0 0 0 0 0
+1700016L21Rik 0 0 0 0 0 0 0 0
+1700016P04Rik 0 0 0 0 0 0 0 0
+1700017G19Rik 0 0 0 0 0 0 0 0
+1700017J07Rik 0 0 0 0 0 0 0 0
+1700018A04Rik 0 0 0 0 2 1 0 0
+1700018B24Rik 0 0 0 0 0 0 0 0
+1700018G05Rik 0 0 0 0 0 0 0 0
+1700018L02Rik 8 1 0 0 4 6 0 1
+1700019B21Rik 0 0 0 0 0 0 0 0
+1700019E08Rik 0 0 0 0 0 0 0 0
+1700019G24Rik 0 0 0 0 0 0 0 0
+1700020G17Rik 0 1 1 1 0 0 0 0
+1700020I14Rik 6 4 0 6 0 12 2 2
+1700020M21Rik 0 0 0 0 0 0 0 0
+1700020N01Rik 0 0 0 0 0 0 0 0
+1700020N18Rik 0 0 0 0 0 0 0 0
+1700021N21Rik 0 0 0 0 0 0 0 0
+1700022A21Rik 0 0 0 0 0 0 0 0
+1700022A22Rik 0 0 0 0 0 0 0 0
+1700022E09Rik 0 0 0 0 0 0 0 0
+1700022H16Rik 0 0 0 0 0 0 0 0
+1700023C21Rik 0 0 0 0 0 0 0 0
+1700023F02Rik 0 0 0 0 0 0 0 0
+1700023L04Rik 0 0 0 0 0 0 0 0
+1700024B18Rik 0 0 0 0 0 0 0 0
+1700024F13Rik 0 0 0 0 0 0 0 0
+1700024P03Rik 0 0 0 0 0 0 1 0
+1700025B11Rik 0 0 0 0 0 0 0 0
+1700025C18Rik 0 0 0 0 0 0 0 0
+1700025F24Rik 0 0 0 0 0 0 0 0
+1700025K24Rik 0 0 0 0 0 0 0 0
+1700025M24Rik 0 0 0 0 0 0 0 0
+1700025N23Rik 0 0 0 0 0 0 0 0
+1700026D11Rik 0 0 0 0 0 0 0 1
+1700026F02Rik 0 0 0 0 0 0 0 0
+1700027A15Rik 0 0 0 0 0 0 0 0
+1700027F09Rik 0 0 0 0 0 0 0 0
+1700027H10Rik 0 0 0 0 0 0 0 0
+1700027I24Rik 0 0 0 0 0 0 0 0
+1700027J07Rik 1 0 1 0 0 0 0 0
+1700028B04Rik 0 0 0 0 0 0 0 0
+1700028D13Rik 0 0 0 0 0 0 0 0
+1700028E10Rik 3 0 0 2 3 1 2 0
+1700028I16Rik 0 0 0 0 0 0 0 0
+1700028J19Rik 0 0 0 0 0 0 0 0
+1700028M03Rik 0 0 0 0 0 0 0 0
+1700028P15Rik 0 0 0 0 0 0 0 0
+1700029B22Rik 0 0 0 0 0 0 0 0
+1700029J03Rik 0 0 0 0 0 0 0 0
+1700029M20Rik 0 0 0 0 0 0 0 0
+1700029N11Rik 0 0 0 0 0 0 0 0
+1700030A11Rik 0 0 0 0 0 0 0 0
+1700030C10Rik 0 0 0 0 0 0 0 0
+1700030F04Rik 0 0 0 0 0 0 0 0
+1700030L20Rik 0 0 0 0 0 0 0 0
+1700030M09Rik 0 0 0 0 0 0 0 0
+1700030N03Rik 0 0 0 0 0 0 0 0
+1700030O20Rik 0 0 0 0 0 0 0 0
+1700031A10Rik 0 0 0 0 0 0 0 0
+1700031M16Rik 0 0 0 0 0 0 0 0
+1700031P21Rik 0 0 0 0 0 0 0 0
+1700034G24Rik 0 0 0 0 0 0 0 0
+1700034H15Rik 1 0 2 0 3 1 0 0
+1700034I23Rik 0 0 0 0 0 0 0 0
+1700034K08Rik 0 0 0 0 0 0 0 0
+1700034P13Rik 1 0 0 0 0 2 1 0
+1700036G14Rik 0 0 0 0 0 0 0 0
+1700039E22Rik 0 0 0 0 0 0 0 0
+1700040N02Rik 0 0 0 0 0 0 0 1
+1700041C23Rik 0 0 0 0 0 0 0 0
+1700041M19Rik 0 0 0 0 0 0 0 0
+1700042G15Rik 0 0 0 0 0 0 0 0
+1700042O10Rik 4 0 0 0 1 1 0 0
+1700044C05Rik 0 0 0 0 0 0 0 0
+1700044K03Rik 0 0 0 0 0 0 0 0
+1700045H11Rik 4 0 1 0 2 3 5 0
+1700046C09Rik 0 0 0 0 0 0 0 0
+1700047E10Rik 0 0 0 0 0 0 0 0
+1700047G03Rik 0 0 0 0 0 0 0 0
+1700047L14Rik 0 0 0 0 0 0 0 0
+1700047M11Rik 0 0 0 0 0 0 0 0
+1700048M11Rik 0 1 0 0 0 0 0 0
+1700048O20Rik 0 0 0 0 0 0 0 0
+1700049E15Rik 0 0 0 0 0 0 0 0
+1700049E22Rik 0 0 0 0 0 0 0 0
+1700049L16Rik 0 0 0 0 0 0 0 0
+1700051A21Rik 0 0 0 0 0 0 0 0
+1700052I22Rik 0 0 0 0 0 0 0 0
+1700052K11Rik 1 2 0 2 0 2 1 1
+1700054A03Rik 0 0 0 1 0 0 0 1
+1700054K19Rik 0 0 0 0 0 0 0 0
+1700054M17Rik 0 0 0 0 0 0 0 0
+1700055C04Rik 0 0 0 0 0 0 0 0
+1700057H15Rik 0 0 0 0 0 0 0 0
+1700058G18Rik 0 0 0 0 0 0 0 0
+1700060C16Rik 0 0 1 0 0 2 0 0
+1700060C20Rik 0 0 0 0 0 0 0 0
+1700061F12Rik 0 0 0 0 0 0 0 0
+1700061I17Rik 1 0 0 3 0 0 0 1
+1700063A18Rik 0 0 0 0 0 0 0 0
+1700063D05Rik 0 0 0 0 0 0 0 0
+1700063O14Rik 0 0 0 0 0 0 0 0
+1700064J06Rik 0 0 0 0 0 0 0 0
+1700064M15Rik 0 0 0 0 0 0 0 0
+1700065D16Rik 0 0 0 0 0 0 0 0
+1700065I16Rik 0 0 0 0 0 0 0 0
+1700065J11Rik 0 0 0 0 0 0 0 0
+1700065J18Rik 0 0 0 0 0 0 0 0
+1700065O20Rik 0 0 1 0 0 0 0 0
+1700066B17Rik 0 0 0 0 0 0 0 0
+1700066J24Rik 0 0 0 0 0 0 0 0
+1700066N21Rik 0 0 1 0 0 0 0 0
+1700066O22Rik 0 0 0 0 0 0 0 0
+1700067G17Rik 1 0 0 0 0 0 0 0
+1700069L16Rik 0 0 1 0 0 0 0 0
+1700069P05Rik 0 0 0 0 0 0 0 0
+1700071M16Rik 0 0 0 0 0 0 0 0
+1700072B07Rik 0 0 0 0 0 0 0 0
+1700072O05Rik 0 0 0 0 0 0 0 0
+1700073E17Rik 0 0 0 0 0 0 0 0
+1700074H08Rik 0 0 0 0 0 0 0 0
+1700080N15Rik 0 0 0 0 0 0 0 0
+1700081H04Rik 0 0 0 0 0 0 0 0
+1700081H22Rik 0 0 0 0 0 0 0 0
+1700084E18Rik 0 1 0 0 0 0 0 0
+1700084F23Rik 0 0 0 0 0 0 0 0
+1700084J12Rik 0 0 0 0 0 0 0 0
+1700085B03Rik 0 0 0 0 0 0 0 0
+1700085C21Rik 0 0 0 0 0 0 0 0
+1700086L19Rik 0 0 0 0 0 0 0 0
+1700086O06Rik 8 1 3 7 2 1 4 0
+1700091E21Rik 0 0 0 0 0 0 1 2
+1700091H14Rik 0 0 0 0 0 0 0 0
+1700092C02Rik 0 0 0 0 0 0 0 0
+1700092C10Rik 1 0 0 0 0 0 0 0
+1700092E19Rik 0 0 0 0 0 0 0 0
+1700092K14Rik 0 0 0 0 0 0 0 0
+1700094J05Rik 0 0 0 0 0 1 0 0
+1700094M24Rik 0 0 0 0 0 0 0 0
+1700095A21Rik 0 0 0 0 0 0 0 0
+1700095B10Rik 0 0 0 0 0 0 2 0
+1700095B22Rik 0 1 0 0 0 0 0 0
+1700096J18Rik 0 0 0 0 0 0 0 0
+1700096K18Rik 2 0 0 0 0 0 0 0
+1700097N02Rik 0 0 0 0 0 0 0 0
+1700100L14Rik 0 0 0 0 0 0 0 0
+1700101I11Rik 0 0 0 0 1 2 0 0
+1700101O22Rik 0 0 0 0 0 0 0 0
+1700102H20Rik 0 0 0 4 0 0 0 0
+1700104A03Rik 0 0 0 0 0 0 0 0
+1700105P06Rik 0 1 0 0 0 0 0 0
+1700108F19Rik 0 0 0 0 0 0 0 0
+1700108J01Rik 0 0 0 0 0 0 0 0
+1700109F18Rik 0 0 0 0 0 0 0 0
+1700109G14Rik 0 0 0 0 0 0 0 0
+1700109G15Rik 0 0 0 0 0 0 0 0
+1700109I08Rik 0 0 0 0 0 0 0 0
+1700110C19Rik 0 0 0 0 0 0 0 0
+1700110I01Rik 0 0 0 0 0 0 0 0
+1700110K17Rik 0 0 0 0 0 0 0 0
+1700111N16Rik 0 0 0 0 0 0 0 0
+1700112H15Rik 0 0 0 0 0 0 0 0
+1700112J05Rik 0 0 0 0 0 0 0 0
+1700113A16Rik 2 1 0 1 1 2 3 1
+1700119H24Rik 0 0 0 0 0 2 0 0
+1700120C14Rik 2 0 0 0 0 0 0 0
+1700120E14Rik 2 1 0 0 0 0 0 0
+1700120G07Rik 0 0 0 0 0 0 0 0
+1700120K04Rik 0 1 0 0 0 0 0 0
+1700121L16Rik 0 0 0 0 0 0 0 0
+1700121N20Rik 0 0 0 0 0 0 0 0
+1700123L14Rik 0 0 0 0 0 0 0 0
+1700123M08Rik 0 6 3 3 0 1 0 1
+1700123O12Rik 0 0 0 1 0 0 0 0
+1700123O21Rik 0 0 0 0 0 0 0 0
+1700125G02Rik 0 0 0 0 0 0 0 0
+1700125G22Rik 0 0 0 0 1 0 0 0
+1700125H03Rik 0 0 0 1 0 0 2 0
+1700126H18Rik 0 0 0 0 1 0 0 2
+1700128A07Rik 0 0 0 0 0 0 0 0
+1700128F08Rik 0 0 0 0 0 0 0 0
+1810006J02Rik 0 0 0 0 0 0 0 0
+1810007C17Rik 0 0 0 0 0 0 0 0
+1810007D17Rik 0 0 1 0 0 0 0 0
+1810007I06Rik 0 0 0 0 0 0 0 0
+1810008I18Rik 8 0 0 0 0 16 1 0
+1810010D01Rik 0 1 0 0 0 0 0 0
+1810012K16Rik 0 0 1 1 0 0 1 0
+1810013A23Rik 0 0 0 0 0 0 0 0
+1810014B01Rik 1 0 0 0 1 4 0 0
+1810018F18Rik 0 0 0 0 0 0 0 0
+1810019D21Rik 42 0 0 0 36 30 9 0
+1810020O05Rik 0 0 0 0 0 0 0 0
+1810021B22Rik 0 0 0 0 0 2 0 0
+1810026B05Rik 8 0 0 0 1 5 1 0
+1810032O08Rik 228 30 39 93 168 111 102 30
+1810034E14Rik 11 9 2 15 10 4 8 5
+1810035I16Rik 0 0 0 0 0 0 0 0
+1810044D09Rik 1 0 0 0 0 1 0 0
+1810053B23Rik 0 0 0 0 0 0 0 0
+1810058I24Rik 10 0 2 2 2 28 6 0
+1810062O18Rik 1 1 0 0 2 3 0 0
+1810064F22Rik 8 0 0 0 2 4 0 0
+2010001M06Rik 0 0 0 0 0 0 0 0
+2010003O02Rik 3 0 0 3 2 6 3 0
+2010009K17Rik 7 2 1 0 0 8 3 0
+2010010A06Rik 0 0 0 0 0 0 0 0
+2010016I18Rik 0 0 0 0 0 0 0 0
+2010106C02Rik 0 0 0 0 0 0 0 0
+2010204K13Rik 0 0 0 0 0 0 0 0
+2010308F09Rik 0 1 2 2 0 0 1 1
+2010310C07Rik 5 1 0 0 1 1 1 0
+2010320M18Rik 1 0 0 3 2 1 1 2
+2210015D19Rik 0 1 0 0 0 4 0 0
+2210019I11Rik 0 0 0 0 0 0 0 0
+2210039B01Rik 0 0 0 0 0 0 0 0
+2210408F21Rik 6 6 18 18 42 66 54 24
+2210409D07Rik 0 0 1 0 0 0 0 0
+2210409E12Rik 0 0 0 0 0 0 0 0
+2210414B05Rik 0 0 0 0 0 0 0 0
+2210416O15Rik 0 0 0 1 1 0 0 0
+2210417A02Rik 0 0 0 0 0 2 0 0
+2210417K05Rik 0 0 0 0 0 0 0 0
+2210420H20Rik 0 0 0 0 0 0 0 0
+2310001H17Rik 13 0 0 0 9 14 15 3
+2310001K24Rik 0 0 0 1 1 1 0 1
+2310002D06Rik 0 0 0 0 0 0 0 0
+2310002F09Rik 0 0 0 0 0 0 0 0
+2310005A03Rik 0 0 0 0 0 0 0 0
+2310005E17Rik 0 0 0 0 0 0 0 0
+2310008N11Rik 0 0 0 0 0 0 0 0
+2310009A05Rik 1 0 0 0 0 0 0 0
+2310010J17Rik 5 2 0 3 0 0 0 0
+2310014F07Rik 0 0 2 1 0 0 0 0
+2310015A10Rik 5 0 0 0 0 2 1 0
+2310015B20Rik 0 0 0 0 0 0 0 0
+2310015D24Rik 0 0 0 0 0 1 0 0
+2310016D03Rik 0 0 1 1 0 0 0 0
+2310020H05Rik 0 0 0 0 0 0 0 0
+2310030A07Rik 0 0 0 0 0 0 0 0
+2310034G01Rik 0 0 0 0 0 0 0 0
+2310034O05Rik 0 0 0 0 0 0 0 0
+2310039L15Rik 1 0 0 0 0 0 0 0
+2310040G24Rik 4 0 0 2 0 0 2 0
+2310043L19Rik 0 0 0 0 0 0 0 0
+2310043O21Rik 2 0 1 0 0 0 0 0
+2310044G17Rik 6 0 2 0 3 7 2 1
+2310050B05Rik 0 1 0 4 0 0 2 3
+2310061J03Rik 2 0 0 0 1 0 0 0
+2310065F04Rik 0 0 0 0 0 0 0 0
+2310068J16Rik 0 0 0 0 0 0 0 0
+2310069B03Rik 0 0 0 0 0 0 0 0
+2310069G16Rik 0 0 0 0 0 0 0 0
+2310081J21Rik 0 0 0 0 0 0 0 0
+2410003L11Rik 0 0 0 0 0 0 0 0
+2410004I01Rik 0 0 0 0 0 0 0 0
+2410004N09Rik 22 0 0 2 0 26 0 0
+2410006H16Rik 656 221 199 482 413 264 454 238
+2410007B07Rik 0 0 0 0 0 0 0 0
+2410012E07Rik 0 0 0 0 0 0 0 0
+2410017I17Rik 1 0 0 0 0 0 0 0
+2410018L13Rik 0 0 0 0 0 0 0 0
+2410021H03Rik 0 0 0 0 0 0 0 0
+2410057H14Rik 0 0 0 0 0 0 0 0
+2410088K16Rik 0 0 0 0 0 0 0 0
+2410114N07Rik 0 0 0 0 0 0 0 0
+2410133F24Rik 1 0 1 0 0 0 0 0
+2410137F16Rik 1 0 0 2 0 1 1 0
+2500004C02Rik 0 0 0 0 0 0 0 0
+2510003D18Rik 0 0 0 0 0 0 0 0
+2600006L11Rik 0 0 0 0 0 0 2 0
+2610001J05Rik 0 1 1 1 1 2 0 1
+2610002J02Rik 1 0 0 2 1 1 0 1
+2610005L07Rik 0 0 0 0 0 0 0 0
+2610016A17Rik 0 0 0 0 0 0 0 0
+2610017I09Rik 0 0 0 0 0 0 0 0
+2610019E17Rik 248 45 22 86 196 98 155 42
+2610020C07Rik 7 2 0 0 0 9 1 0
+2610027K06Rik 1 0 2 1 0 6 1 0
+2610028E06Rik 0 0 0 0 0 0 0 0
+2610035D17Rik 1 0 1 0 0 1 0 1
+2610035F20Rik 1 0 0 0 0 2 0 0
+2610037D02Rik 0 1 0 0 0 0 0 1
+2610100L16Rik 0 0 0 0 0 0 0 0
+2610203C20Rik 30 132 92 190 18 6 23 119
+2610203C22Rik 6 1 1 0 0 7 0 0
+2610204G22Rik 2 0 0 0 0 0 0 0
+2610206C17Rik 1 0 0 0 0 1 1 0
+2610306M01Rik 2 0 0 0 0 0 0 0
+2610307P16Rik 0 0 2 0 0 0 2 2
+2610316D01Rik 0 0 0 0 0 0 0 0
+2610507I01Rik 0 0 0 0 0 0 0 0
+2700038G22Rik 90 108 100 322 58 68 58 68
+2700046A07Rik 0 0 0 0 0 0 0 0
+2700046G09Rik 0 0 1 0 0 0 0 0
+2700054A10Rik 0 0 0 0 0 0 0 0
+2700069I18Rik 1 0 0 0 0 2 2 0
+2700070H01Rik 0 0 0 0 0 0 0 0
+2700081L22Rik 0 0 0 0 0 0 0 0
+2700086A05Rik 0 0 0 0 0 0 0 0
+2700089E24Rik 27 1 1 0 0 36 2 3
+2700089I24Rik 0 0 1 0 0 0 0 0
+2700097O09Rik 0 0 0 0 0 2 0 0
+2700099C18Rik 0 0 0 0 0 0 0 0
+2810001G20Rik 2 0 0 2 0 0 0 0
+2810002D19Rik 0 0 0 0 0 0 0 0
+2810008D09Rik 58 9 4 13 4 31 7 11
+2810011L19Rik 0 0 0 0 0 0 0 0
+2810013P06Rik 4 0 0 2 4 2 1 0
+2810025M15Rik 0 1 0 0 0 0 0 0
+2810029C07Rik 0 1 0 0 0 0 0 0
+2810032G03Rik 0 0 0 0 0 0 0 0
+2810047C21Rik1 0 0 0 0 0 0 0 0
+2810049E08Rik 0 0 0 0 0 0 0 0
+2810055G20Rik 4 3 3 3 0 2 2 2
+2810403D21Rik 0 0 0 0 0 0 0 0
+2810404M03Rik 0 0 0 0 0 0 0 0
+2810405F15Rik 0 0 0 0 0 0 0 0
+2810408I11Rik 0 0 0 0 0 1 1 0
+2810410L24Rik 0 2 0 0 0 0 1 0
+2810429I04Rik 0 0 0 0 0 0 0 0
+2810433D01Rik 0 0 0 0 0 0 0 0
+2810442I21Rik 0 0 0 0 0 1 0 0
+2810442N19Rik 0 1 0 0 0 0 0 0
+2810454H06Rik 1 2 2 5 0 1 6 1
+2810468N07Rik 0 0 0 0 0 0 0 0
+2810471M01Rik 0 0 0 0 0 0 0 0
+2900002K06Rik 1 0 0 0 0 1 0 0
+2900005J15Rik 1 0 1 0 0 0 0 0
+2900008C10Rik 0 1 2 2 2 0 1 0
+2900009J06Rik 7 0 0 0 0 3 0 0
+2900041M22Rik 0 0 0 0 0 0 0 0
+2900052N01Rik 0 0 0 0 0 0 0 0
+2900055J20Rik 0 0 0 1 0 0 0 0
+2900056M20Rik 0 2 2 4 0 0 2 0
+2900057B20Rik 0 0 0 0 0 1 0 0
+2900060B14Rik 27 18 14 57 21 6 11 31
+2900076A07Rik 301 116 77 417 183 246 226 97
+2900079G21Rik 0 0 0 0 0 0 0 0
+2900092D14Rik 0 0 0 0 0 0 0 0
+2900093L17Rik 0 0 0 0 0 0 0 0
+2900097C17Rik 0 0 0 0 0 0 0 0
+3000002C10Rik 0 0 0 0 0 0 0 0
+3010001F23Rik 0 0 0 2 0 0 0 0
+3010033K07Rik 0 0 0 0 0 0 0 0
+3100003L05Rik 0 0 0 0 0 0 0 0
+3110009F21Rik 0 0 0 0 0 0 0 0
+3110015C05Rik 0 0 0 0 0 0 0 0
+3110021A11Rik 0 0 0 1 0 0 1 0
+3110039I08Rik 0 0 2 0 0 0 0 3
+3110039M20Rik 0 0 0 0 0 0 0 0
+3110045C21Rik 10 0 0 3 3 2 2 1
+3110056K07Rik 1 0 1 2 1 4 0 0
+3110070M22Rik 0 0 0 0 1 0 0 0
+3110099E03Rik 0 0 0 0 0 0 0 0
+3200001D21Rik 0 0 0 0 0 0 0 0
+3300005D01Rik 0 0 0 0 0 0 0 0
+3632454L22Rik 0 0 0 0 0 0 0 0
+3830408C21Rik 0 0 0 1 0 0 0 0
+3930402G23Rik 0 0 0 0 0 0 0 0
+4632415L05Rik 0 0 0 0 0 0 0 0
+4632427E13Rik 2 0 0 0 0 1 0 0
+4632428C04Rik 0 0 0 1 0 0 0 0
+4732416N19Rik 1 0 3 3 1 2 1 0
+4732471J01Rik 25 4 0 3 10 14 18 4
+4732490B19Rik 0 0 0 0 0 0 0 0
+4732491K20Rik 0 0 0 0 0 0 0 0
+4831440E17Rik 0 0 0 0 0 3 0 0
+4833411C07Rik 2 0 0 0 0 1 0 0
+4833412C05Rik 0 0 0 0 0 0 0 0
+4833417C18Rik 2 0 0 1 1 1 4 0
+4833418N02Rik 34 9 3 14 28 51 25 6
+4833419F23Rik 0 2 0 1 0 0 0 0
+4833422C13Rik 9 2 1 1 6 15 0 0
+4833427F10Rik 0 0 0 0 0 0 0 0
+4833428L15Rik 0 0 0 0 0 0 1 0
+4921504A21Rik 0 0 0 0 0 0 0 0
+4921507L20Rik 1 0 0 0 0 0 0 0
+4921508A21Rik 0 0 0 0 0 0 0 0
+4921508D12Rik 0 0 0 0 0 0 0 0
+4921509O07Rik 0 0 1 0 0 0 0 0
+4921511C10Rik 0 0 1 1 0 3 2 0
+4921511C20Rik 0 0 0 0 0 0 0 0
+4921511I17Rik 0 0 1 0 0 0 0 0
+4921513I03Rik 0 0 2 0 2 0 0 2
+4921515E04Rik 1 0 1 0 0 0 0 0
+4921524J17Rik 0 0 0 0 0 2 0 0
+4921525B02Rik 0 0 0 0 0 0 0 0
+4921525O09Rik 0 0 0 0 0 0 0 0
+4921530L18Rik 0 1 1 1 0 0 0 0
+4921531C22Rik 0 0 1 1 2 0 1 0
+4921531P14Rik 0 0 0 0 0 0 0 0
+4921533I20Rik 0 0 0 0 0 0 0 0
+4922502H24Rik 0 0 0 0 0 0 0 0
+4922502N22Rik 0 0 0 0 0 0 0 0
+4930401C15Rik 0 0 0 0 0 0 0 0
+4930401O10Rik 0 0 0 0 0 0 0 0
+4930401O12Rik 0 0 0 0 0 0 0 0
+4930402F11Rik 0 0 0 0 0 0 0 0
+4930404A05Rik 0 0 0 0 0 0 0 0
+4930404H11Rik 0 0 0 0 0 0 0 0
+4930404I05Rik 0 0 0 0 0 2 0 0
+4930405A10Rik 0 0 0 0 0 0 0 0
+4930405A21Rik 0 0 0 0 0 0 0 0
+4930405D11Rik 0 0 0 0 0 0 0 0
+4930405J17Rik 0 0 0 0 0 0 0 0
+4930405P13Rik 3 0 0 0 0 7 0 0
+4930406D18Rik 0 0 0 0 0 0 0 0
+4930412B13Rik 0 1 0 0 0 0 0 0
+4930412C18Rik 0 1 1 0 0 0 0 2
+4930412O13Rik 0 0 0 0 0 0 0 0
+4930413E15Rik 0 0 0 0 0 0 0 0
+4930413F20Rik 0 0 0 0 0 0 0 0
+4930413G21Rik 2 1 0 1 6 2 0 0
+4930413M19Rik 0 0 0 0 0 0 0 0
+4930414L22Rik 1 1 0 1 0 3 1 1
+4930414N06Rik 3 0 0 0 0 1 0 0
+4930417O13Rik 3 2 0 0 0 5 2 0
+4930417O22Rik 0 0 0 0 0 0 0 0
+4930419G24Rik 0 1 0 0 0 0 0 0
+4930423M02Rik 0 0 0 0 0 0 0 0
+4930425K10Rik 0 0 0 0 0 0 0 0
+4930425O10Rik 0 0 0 0 0 0 0 0
+4930426L09Rik 2 0 0 1 1 0 0 0
+4930428E07Rik 0 0 0 0 0 0 0 0
+4930428G15Rik 0 0 0 0 0 0 0 0
+4930428O21Rik 0 0 0 0 0 0 0 0
+4930429B21Rik 0 0 0 0 0 0 0 1
+4930429D17Rik 0 0 0 0 0 0 0 0
+4930429F11Rik 0 0 0 0 0 0 0 0
+4930429F24Rik 0 1 1 0 2 3 0 1
+4930430F21Rik 0 0 0 0 0 0 0 0
+4930430J02Rik 0 0 0 0 0 0 0 0
+4930431F12Rik 0 0 0 0 0 0 0 0
+4930431P03Rik 0 0 0 0 0 0 0 0
+4930432J09Rik 0 0 0 0 0 0 0 0
+4930433B08Rik 0 1 0 0 0 0 0 0
+4930433N12Rik 0 0 0 0 0 0 0 0
+4930434J06Rik 0 0 0 0 0 0 0 0
+4930438E09Rik 0 0 0 0 0 0 0 1
+4930440C22Rik 0 0 0 0 0 0 0 0
+4930441J16Rik 0 0 0 0 0 0 0 0
+4930441O14Rik 0 0 0 0 0 0 1 0
+4930442J19Rik 0 0 0 0 0 0 0 0
+4930442L01Rik 0 0 0 0 0 1 1 0
+4930443O20Rik 0 0 0 0 0 0 0 0
+4930444F02Rik 0 0 0 0 0 0 0 0
+4930444M15Rik 0 0 0 0 0 0 0 0
+4930447J18Rik 0 0 0 0 0 0 0 0
+4930447K03Rik 0 0 0 0 0 0 0 0
+4930447N08Rik 0 0 0 0 0 0 0 0
+4930448C13Rik 0 0 0 0 0 0 0 0
+4930448F12Rik 0 0 0 0 0 0 0 0
+4930448H16Rik 0 0 0 0 0 0 0 0
+4930448I06Rik 0 0 0 0 0 0 0 0
+4930448I18Rik 0 0 0 0 0 0 0 0
+4930448K20Rik 0 0 0 0 0 0 0 0
+4930449E01Rik 0 0 0 0 0 0 0 0
+4930449E18Rik 0 1 0 0 0 0 0 0
+4930451G09Rik 1 0 0 0 2 0 1 0
+4930452A19Rik 2 0 1 1 0 0 0 0
+4930452G13Rik 0 0 0 0 0 0 0 0
+4930452N14Rik 0 0 0 0 0 0 0 0
+4930453L07Rik 0 0 0 0 0 0 0 0
+4930455B14Rik 0 0 0 0 0 0 0 0
+4930455C13Rik 1 0 0 0 0 0 0 0
+4930455D15Rik 0 1 0 1 0 0 0 0
+4930455F16Rik 0 0 0 0 0 0 0 0
+4930455H04Rik 3 0 1 0 1 4 0 0
+4930455J16Rik 0 0 0 0 0 0 0 0
+4930456L15Rik 0 0 0 0 0 0 0 0
+4930459L07Rik 0 0 0 0 0 0 0 0
+4930461G14Rik 0 0 0 0 0 0 0 0
+4930465K10Rik 0 0 0 0 0 0 0 0
+4930465M20Rik 0 0 0 0 0 0 0 0
+4930467D21Rik 2 0 1 0 0 1 0 0
+4930467K11Rik 0 0 0 0 0 0 0 0
+4930470H14Rik 0 0 0 0 0 0 0 0
+4930470P17Rik 0 0 0 0 0 0 0 0
+4930471C04Rik 0 0 0 0 0 0 0 0
+4930471G03Rik 0 0 0 0 0 0 0 0
+4930471I20Rik 3 0 0 1 0 8 0 1
+4930471M09Rik 2 0 0 0 0 0 0 0
+4930473A02Rik 2 0 0 2 0 1 0 0
+4930473O22Rik 0 0 0 0 0 0 0 0
+4930474G06Rik 0 1 1 1 0 1 0 0
+4930474H20Rik 0 0 0 0 0 0 0 0
+4930474M22Rik 0 0 0 0 0 0 0 0
+4930474N09Rik 0 0 0 0 0 0 0 0
+4930478L05Rik 0 0 0 0 0 0 0 0
+4930478P22Rik 0 0 0 0 0 0 0 0
+4930479D17Rik 0 0 0 0 0 0 0 0
+4930479M11Rik 0 0 0 0 0 0 0 0
+4930480G23Rik 0 0 0 0 0 0 0 0
+4930480K15Rik 0 0 0 0 0 0 0 0
+4930480M12Rik 0 1 0 0 0 0 0 0
+4930481A15Rik 6 2 0 0 0 4 0 0
+4930483J18Rik 0 0 0 0 0 0 0 0
+4930483K19Rik 8 0 0 0 3 11 1 1
+4930483O08Rik 0 0 0 0 0 0 0 0
+4930486F22Rik 0 0 0 0 0 0 0 0
+4930486I03Rik 1 0 0 0 0 0 0 0
+4930487D11Rik 0 0 0 0 0 0 0 0
+4930487H11Rik 0 0 0 0 0 0 0 0
+4930488B22Rik 0 0 0 0 0 0 0 0
+4930488L21Rik 0 0 0 0 0 0 0 0
+4930500F04Rik 0 0 0 0 0 0 0 0
+4930500J02Rik 0 0 0 0 0 0 0 0
+4930500L23Rik 0 0 0 0 0 0 0 0
+4930502A04Rik 0 0 0 0 0 0 0 0
+4930502E09Rik 0 0 0 0 1 0 3 0
+4930503E24Rik 0 0 0 0 0 0 0 0
+4930503H13Rik 0 0 0 0 0 0 0 0
+4930503O07Rik 0 0 0 0 0 0 0 0
+4930505G20Rik 0 0 0 0 0 0 0 0
+4930506C21Rik 1 1 0 1 1 2 3 0
+4930507D05Rik 0 0 0 0 0 0 0 1
+4930509E16Rik 4 0 0 1 5 0 0 1
+4930509J09Rik 0 0 0 1 0 0 0 0
+4930509K18Rik 0 0 0 0 0 0 0 0
+4930511A02Rik 0 0 0 0 0 0 0 0
+4930511E03Rik 0 0 0 0 0 0 0 0
+4930511M06Rik 0 0 0 0 0 0 0 0
+4930512B01Rik 4 0 0 1 1 3 0 0
+4930513D17Rik 0 0 0 0 0 0 0 0
+4930513N10Rik 0 0 0 1 0 1 0 1
+4930515B02Rik 0 0 0 0 0 0 0 0
+4930515G01Rik 3 0 0 1 0 2 1 0
+4930515G16Rik 0 0 0 0 0 0 0 0
+4930515L03Rik 0 1 0 0 0 0 0 0
+4930515L19Rik 0 0 0 0 0 0 0 0
+4930517E11Rik 0 0 0 0 0 0 0 0
+4930518P08Rik 0 0 0 0 0 0 0 0
+4930519D14Rik 0 0 0 0 0 0 0 0
+4930519F09Rik 0 0 4 0 0 0 0 1
+4930519F24Rik 0 0 0 0 0 0 0 0
+4930519H02Rik 0 0 0 0 0 0 0 0
+4930520O04Rik 0 0 0 2 0 0 0 0
+4930520P13Rik 0 0 0 0 0 0 0 0
+4930521E06Rik 0 0 0 0 0 0 0 0
+4930522O17Rik 0 0 0 0 0 0 0 0
+4930523C07Rik 1 1 0 0 1 2 1 1
+4930523O13Rik 0 0 0 0 0 0 0 0
+4930524C18Rik 0 0 0 0 0 0 0 0
+4930524L23Rik 0 0 0 0 0 0 0 1
+4930524O05Rik 0 0 0 0 0 0 0 0
+4930524O08Rik 0 0 0 0 0 0 0 0
+4930525D18Rik 0 0 0 0 0 0 0 0
+4930525G20Rik 0 0 0 0 0 0 0 0
+4930526I15Rik 1 0 0 4 0 0 2 1
+4930526L06Rik 2 0 1 0 0 0 0 1
+4930527F14Rik 0 0 0 0 1 0 1 2
+4930527G23Rik 0 0 0 0 0 0 0 0
+4930528A17Rik 0 2 0 0 0 0 0 0
+4930528D03Rik 0 0 0 0 0 0 0 0
+4930528P14Rik 0 0 0 0 0 0 0 0
+4930529C04Rik 0 0 0 0 0 0 0 0
+4930529F24Rik 0 0 0 0 0 0 0 0
+4930529K09Rik 0 0 0 0 0 1 0 0
+4930529L06Rik 0 0 0 0 0 0 0 0
+4930533B01Rik 1 0 0 0 0 0 0 0
+4930533P14Rik 0 0 0 0 0 0 0 0
+4930539C22Rik 0 0 0 0 0 0 0 0
+4930539J05Rik 2 1 0 0 0 0 0 0
+4930539M17Rik 0 0 0 0 0 0 0 0
+4930539N22Rik 0 0 0 0 0 0 0 0
+4930540M03Rik 0 0 0 0 0 0 0 0
+4930542C21Rik 0 0 0 0 0 0 0 0
+4930542D17Rik 0 0 0 0 0 0 0 0
+4930542H20Rik 0 0 0 0 0 0 0 0
+4930543E12Rik 0 0 0 0 0 0 0 0
+4930544M13Rik 0 0 1 0 1 0 0 0
+4930545E07Rik 0 0 0 0 0 0 0 0
+4930545H06Rik 0 0 0 0 0 0 0 0
+4930545L23Rik 1 0 0 0 2 3 0 0
+4930546C10Rik 0 0 0 1 0 0 1 0
+4930546K05Rik 1 0 0 0 2 2 0 0
+4930547E08Rik 0 0 0 0 1 0 0 0
+4930547E14Rik 0 0 0 1 0 0 2 1
+4930548G14Rik 0 0 0 0 0 0 0 0
+4930548J01Rik 0 0 0 0 0 0 0 0
+4930548K13Rik 0 0 0 0 0 0 0 0
+4930549G23Rik 3 0 0 0 0 4 0 0
+4930552N02Rik 0 0 1 0 0 0 0 0
+4930552P12Rik 1 0 0 0 0 0 2 0
+4930553E22Rik 0 0 0 0 0 0 0 0
+4930554C24Rik 0 0 0 0 0 0 0 0
+4930555B11Rik 18 4 7 4 3 10 6 9
+4930556C24Rik 0 0 0 0 0 0 0 0
+4930556G01Rik 0 0 0 0 0 0 0 0
+4930556J02Rik 0 0 0 0 0 0 0 0
+4930556M19Rik 11 2 0 0 3 7 0 0
+4930556N09Rik 0 0 0 0 0 0 0 1
+4930557J02Rik 0 0 1 0 0 0 0 0
+4930558C23Rik 0 0 0 0 0 0 0 0
+4930558G05Rik 0 0 0 0 0 0 0 0
+4930558J18Rik 0 0 0 0 0 0 0 0
+4930562F07Rik 2 0 2 0 0 6 0 0
+4930563E18Rik 0 0 0 0 0 0 0 0
+4930563F08Rik 0 0 0 0 0 0 0 0
+4930563M20Rik 0 1 0 0 0 0 0 0
+4930564G21Rik 0 0 0 0 0 0 0 0
+4930564K09Rik 4 0 0 0 0 3 0 0
+4930565D16Rik 0 0 0 0 0 0 0 0
+4930565N06Rik 2 1 1 1 0 2 0 1
+4930567H12Rik 0 0 0 0 0 0 0 0
+4930567J20Rik 0 0 0 0 0 0 0 0
+4930567K20Rik 0 0 0 0 0 0 0 0
+4930568E12Rik 0 0 0 0 0 0 0 0
+4930568G15Rik 1 1 0 0 0 3 0 0
+4930568K20Rik 0 0 0 0 0 0 0 0
+4930570G19Rik 0 0 0 3 0 0 0 0
+4930572K03Rik 0 0 0 0 0 0 0 0
+4930572O03Rik 0 0 0 0 0 0 0 0
+4930572O13Rik 0 0 0 0 0 0 0 0
+4930573O16Rik 3 0 0 0 0 1 1 1
+4930577N17Rik 3 0 0 1 1 0 2 0
+4930578E11Rik 0 0 0 0 0 0 0 0
+4930578M01Rik 0 1 1 0 0 0 0 1
+4930578N18Rik 0 0 0 0 0 0 0 0
+4930579G18Rik 0 0 0 1 0 0 0 0
+4930579K19Rik 0 0 0 0 0 0 0 0
+4930581F22Rik 10 0 0 1 3 13 6 0
+4930583K01Rik 1 1 0 0 1 0 1 2
+4930583P06Rik 0 0 0 0 0 0 0 0
+4930584F24Rik 0 0 0 0 0 0 0 0
+4930590L20Rik 0 0 0 2 0 0 0 0
+4930592A05Rik 2 0 0 0 0 4 0 0
+4930592I03Rik 0 0 0 1 0 0 0 0
+4930593A02Rik 1 0 0 0 0 1 0 0
+4930593C16Rik 0 0 0 0 0 0 0 0
+4930594C11Rik 1 0 0 1 0 0 0 0
+4930596M17Rik 0 0 0 0 0 0 0 0
+4930597G03Rik 0 0 0 0 0 0 0 0
+4930598F16Rik 0 0 0 0 0 0 0 0
+4930599N23Rik 5 0 1 0 0 14 0 2
+4931402G19Rik 0 1 0 0 0 1 0 0
+4931403E22Rik 6 0 0 0 0 10 0 0
+4931403G20Rik 4 0 0 0 0 0 0 0
+4931406H21Rik 0 0 0 0 0 1 0 0
+4931408D14Rik 10 0 0 0 0 12 0 0
+4931409K22Rik 0 0 0 0 0 0 0 0
+4931419H13Rik 0 0 0 0 0 0 0 0
+4931420L22Rik 0 0 0 0 0 0 0 0
+4931428L18Rik 0 0 0 0 0 0 0 0
+4931429P17Rik 0 1 0 0 0 0 0 0
+4931430N09Rik 0 0 0 1 0 0 0 0
+4931431B13Rik 0 0 0 0 0 0 0 0
+4931431C16Rik 1 1 0 3 1 0 1 1
+4931440J10Rik 2 1 1 2 4 2 1 2
+4931440L10Rik 0 0 0 0 0 0 0 0
+4931440P22Rik 4 1 0 0 1 2 4 0
+4932412D23Rik 0 0 0 2 0 0 0 2
+4932413F04Rik 0 0 0 0 0 0 0 0
+4932414J04Rik 0 0 0 0 0 0 0 0
+4932415G12Rik 0 0 0 1 0 2 0 0
+4932415M13Rik 0 0 0 0 0 0 0 0
+4932416H05Rik 0 1 0 0 0 0 0 0
+4932435O22Rik 0 1 0 0 0 0 0 1
+4932441J04Rik 0 0 1 0 0 2 0 0
+4932702P03Rik 6 3 0 0 2 9 0 0
+4933400A11Rik 0 0 1 0 0 0 0 0
+4933400B14Rik 0 0 0 0 0 0 0 0
+4933400C23Rik 0 0 0 0 0 0 0 0
+4933400F21Rik 1 0 0 0 0 1 0 0
+4933400L20Rik 1 0 0 1 1 1 0 0
+4933401B06Rik 0 0 0 0 0 0 0 0
+4933401D09Rik 0 0 0 0 0 0 0 0
+4933401H06Rik 0 0 0 0 0 0 0 0
+4933401P06Rik 0 0 0 0 0 0 0 0
+4933402C06Rik 0 0 0 0 0 0 0 0
+4933402J10Rik 0 0 2 0 0 0 0 0
+4933402J15Rik 0 0 0 0 0 0 0 0
+4933404G15Rik 0 0 0 0 0 0 0 0
+4933404K08Rik 0 0 0 0 0 0 0 0
+4933404O12Rik 0 0 0 0 0 3 2 0
+4933405D12Rik 8 0 0 0 4 13 0 1
+4933405E24Rik 1 0 0 0 0 1 0 0
+4933406C10Rik 0 0 0 0 0 1 0 0
+4933406D12Rik 0 0 0 0 0 0 0 0
+4933406F09Rik 0 0 0 0 0 0 0 0
+4933406G16Rik 0 0 0 0 0 0 0 0
+4933406I18Rik 1 0 0 0 0 6 4 0
+4933406J10Rik 2 0 0 0 0 0 0 0
+4933406K04Rik 0 0 0 0 0 0 0 0
+4933407E24Rik 0 0 0 0 0 0 0 0
+4933407G14Rik 0 0 1 0 0 0 0 0
+4933407I05Rik 0 0 0 0 0 0 0 0
+4933407K13Rik 1 0 0 0 0 0 0 0
+4933407L21Rik 0 0 0 0 0 0 0 0
+4933408J17Rik 0 0 0 0 0 0 0 0
+4933408N05Rik 0 0 0 0 0 0 0 0
+4933409K07Rik 0 0 0 0 0 0 0 0
+4933411E08Rik 0 0 0 0 0 0 0 0
+4933411G06Rik 0 0 0 0 0 0 0 0
+4933412E12Rik 0 0 0 0 0 0 0 0
+4933412O06Rik 0 0 0 0 0 0 0 0
+4933413J09Rik 0 1 0 0 0 0 0 1
+4933413L06Rik 0 0 0 0 0 0 0 0
+4933416E03Rik 0 0 0 0 0 0 0 0
+4933416M06Rik 0 0 1 0 0 0 0 0
+4933416M07Rik 0 0 0 0 0 0 0 0
+4933417D19Rik 1 0 0 0 3 0 1 0
+4933417E11Rik 0 1 0 0 0 0 0 0
+4933417G07Rik 0 0 0 0 0 0 0 0
+4933417O13Rik 0 0 0 0 0 0 0 0
+4933421O10Rik 1 0 0 0 2 0 1 0
+4933422A05Rik 0 0 0 0 0 0 0 0
+4933424G05Rik 1 0 0 0 0 1 0 0
+4933424G06Rik 0 0 1 0 0 0 0 0
+4933425B07Rik 4 0 0 0 1 3 0 0
+4933425H06Rik 0 0 1 0 0 0 0 0
+4933426D04Rik 0 0 0 0 0 0 0 0
+4933427E11Rik 0 0 0 0 0 0 0 0
+4933427E13Rik 0 0 0 0 0 0 0 0
+4933427I22Rik 0 0 1 0 0 0 0 0
+4933428C19Rik 0 0 0 0 0 0 0 0
+4933429K18Rik 0 0 0 0 0 0 0 0
+4933429O19Rik 0 0 0 0 0 0 0 0
+4933430H16Rik 0 0 0 0 0 0 0 0
+4933430M04Rik 0 0 0 0 0 0 0 0
+4933430N04Rik 0 0 0 0 0 0 0 0
+4933431E20Rik 0 1 0 0 0 0 0 0
+4933431G14Rik 0 0 0 0 0 0 0 0
+4933432G23Rik 0 0 0 0 0 0 0 0
+4933432I03Rik 0 0 0 0 0 0 0 0
+4933432I09Rik 0 0 0 0 0 0 0 0
+4933432K03Rik 0 0 0 0 0 0 0 0
+4933433F19Rik 0 0 0 0 0 0 0 0
+4933433G15Rik 0 0 1 2 0 0 1 0
+4933433G19Rik 0 0 0 0 0 3 0 0
+4933433H22Rik 0 0 0 0 0 0 0 0
+4933436C20Rik 0 0 0 1 0 0 0 0
+4933436E23Rik 0 0 0 0 0 0 0 0
+4933436H12Rik 0 0 1 0 0 0 0 0
+4933438B17Rik 0 0 0 0 0 0 0 0
+4933438K21Rik 0 0 0 0 0 0 0 0
+4933439C10Rik 0 0 0 1 0 0 0 1
+4933439K11Rik 0 0 0 0 0 0 0 0
+4933440J02Rik 3 0 0 0 0 0 0 0
+4933440M02Rik 0 0 0 0 0 0 0 0
+5031425E22Rik 5 4 3 4 5 9 7 4
+5031425F14Rik 0 0 0 0 0 0 0 1
+5031426D15Rik 0 0 0 0 0 0 0 0
+5031434C07Rik 0 0 0 0 0 0 0 0
+5031434O11Rik 0 1 0 1 0 0 0 0
+5033403H07Rik 11 0 0 0 6 5 1 0
+5033404E19Rik 0 0 0 0 0 0 0 0
+5033406O09Rik 0 0 0 0 0 0 1 0
+5330411J11Rik 0 0 0 0 0 0 0 1
+5330413P13Rik 0 0 0 0 0 0 0 0
+5330426P16Rik 0 0 1 0 0 0 0 1
+5330434G04Rik 0 0 0 1 0 0 0 0
+5330439B14Rik 0 0 0 0 0 1 0 2
+5430402O13Rik 0 0 0 2 0 0 2 0
+5430403N17Rik 0 0 0 0 0 0 0 0
+5430405H02Rik 6 0 0 0 8 0 4 2
+5430416N02Rik 195 10 5 23 99 79 141 12
+5430416O09Rik 0 0 0 1 0 0 0 0
+5430417L22Rik 1 0 0 1 0 2 0 0
+5430421F17Rik 0 0 0 0 0 0 0 0
+5430427M07Rik 0 0 0 0 1 0 0 0
+5430428K19Rik 0 0 0 1 0 0 0 0
+5430434I15Rik 0 0 0 0 0 0 0 0
+5430437J10Rik 0 0 0 1 0 0 0 0
+5430440P10Rik 0 0 0 0 0 0 0 0
+5530401A14Rik 0 0 0 0 1 0 0 0
+5530601H04Rik 1 0 0 0 0 1 0 0
+5730403I07Rik 0 0 0 0 0 0 0 0
+5730405O15Rik 0 0 0 0 0 0 0 1
+5730408K05Rik 2 0 0 0 1 0 1 0
+5730412P04Rik 0 0 0 0 0 0 0 0
+5730416F02Rik 0 0 0 0 0 0 0 0
+5730420D15Rik 2 0 0 0 0 4 2 0
+5730422E09Rik 2 0 0 1 2 3 0 0
+5730435O14Rik 0 0 0 0 0 0 0 0
+5730457N03Rik 0 0 0 0 0 0 0 0
+5730460C07Rik 0 0 0 0 0 0 0 0
+5730480H06Rik 1 0 0 0 0 0 0 0
+5730488B01Rik 0 0 0 0 0 0 0 0
+5730522E02Rik 4 0 0 1 1 5 1 0
+5730577I03Rik 0 0 0 0 0 2 0 0
+5830403M04Rik 0 0 0 0 0 0 0 0
+5830416I19Rik 0 0 0 0 0 0 0 0
+5830416P10Rik 0 1 0 0 0 1 0 0
+5830417I10Rik 0 1 0 0 0 1 0 1
+5830418P13Rik 0 0 0 1 0 0 0 0
+5830428M24Rik 0 0 0 0 0 0 0 0
+5830432E09Rik 0 0 0 0 0 0 0 0
+5830444B04Rik 0 0 0 0 0 0 0 0
+5830454E08Rik 1 0 0 0 0 0 0 0
+5930403L14Rik 0 0 0 0 0 0 0 1
+5930412G12Rik 0 0 0 0 0 0 0 0
+5930430L01Rik 0 0 2 0 0 6 6 4
+5930438M14Rik 0 0 0 0 0 0 0 0
+6030407O03Rik 0 0 0 2 0 0 0 1
+6030408B16Rik 0 0 0 0 0 0 0 0
+6030440G07Rik 0 0 0 0 0 1 0 0
+6030443J06Rik 0 0 0 0 0 0 0 0
+6030466F02Rik 0 0 0 0 0 0 0 0
+6030469F06Rik 0 0 0 0 0 0 0 0
+6230400D17Rik 0 0 0 0 0 0 0 0
+6330407A03Rik 0 0 0 0 0 0 0 0
+6330410L21Rik 0 0 0 0 0 0 0 0
+6330415B21Rik 0 0 0 0 0 0 0 0
+6330418K02Rik 0 0 0 1 0 0 0 0
+6330549D23Rik 2 1 1 1 2 0 1 1
+6430411K18Rik 0 1 2 5 0 0 0 9
+6430562O15Rik 0 0 0 0 0 2 0 0
+6430584L05Rik 0 0 0 0 0 0 0 0
+6430706D22Rik 0 0 0 0 0 0 0 0
+6430710C18Rik 0 0 0 0 0 1 0 0
+6530402F18Rik 1 0 0 0 1 0 0 0
+6530411M01Rik 0 0 0 0 0 0 0 0
+6720401G13Rik 0 0 0 0 0 8 0 1
+6720468P15Rik 0 0 0 0 0 0 0 0
+6720483E21Rik 2 2 1 1 3 0 3 0
+6820431F20Rik 0 0 0 0 0 0 0 0
+7420700N18Rik 0 0 0 0 0 0 0 0
+7420701I03Rik 0 0 0 0 0 0 0 0
+7530420F21Rik 0 0 0 0 0 0 0 0
+7630403G23Rik 0 0 0 0 0 0 0 0
+8030423F21Rik 0 0 0 0 0 0 0 0
+8030442B05Rik 0 0 0 0 0 0 1 0
+8030443G20Rik 0 0 0 0 0 0 0 0
+8430403D17Rik 1 1 0 0 0 0 0 0
+8430422H06Rik 0 0 0 0 0 0 0 0
+8430423G03Rik 0 0 0 0 0 0 0 0
+8430426J06Rik 0 0 0 1 0 0 0 0
+8430429K09Rik 7 0 0 3 0 1 0 0
+8430431K14Rik 0 0 0 0 0 0 0 0
+8430436N08Rik 0 0 0 0 0 0 0 0
+8430437L04Rik 0 0 0 0 0 0 0 0
+9030204H09Rik 0 0 0 0 0 0 0 0
+9030404E10Rik 0 1 0 0 1 0 1 0
+9030612E09Rik 0 0 1 0 0 0 0 0
+9130015A21Rik 0 0 0 0 0 0 0 0
+9130015L21Rik 0 0 0 0 0 0 0 0
+9130019P16Rik 5 0 2 0 3 8 2 0
+9130024F11Rik 2 0 0 0 0 0 0 0
+9130206I24Rik 0 0 0 0 0 0 0 0
+9130209A04Rik 0 1 0 0 0 0 0 0
+9130221F21Rik 0 0 0 0 0 0 0 0
+9130221H12Rik 1 0 0 1 0 4 0 0
+9130227L01Rik 0 0 0 0 0 0 0 0
+9130230L23Rik 0 0 0 0 0 0 0 0
+9230009I02Rik 0 0 0 0 0 0 0 0
+9230102K24Rik 0 0 0 0 0 0 0 0
+9230102O04Rik 0 0 0 0 0 0 0 0
+9230105E05Rik 0 0 0 0 0 0 0 0
+9230112J17Rik 0 0 0 4 0 0 0 0
+9230114K14Rik 0 0 2 0 1 0 0 0
+9230115E21Rik 0 1 0 1 0 0 0 0
+9230116N13Rik 0 0 0 0 1 2 1 0
+9330020H09Rik 3 1 0 0 0 1 0 1
+9330102E08Rik 0 0 0 0 0 0 0 0
+9330111N05Rik 0 0 0 0 0 0 0 0
+9330117O12Rik 0 0 0 0 0 0 0 0
+9330133O14Rik 5 0 0 0 0 0 1 0
+9330151L19Rik 0 0 0 0 0 3 1 0
+9330158H04Rik 0 0 0 0 0 0 1 0
+9330159M07Rik 0 0 0 0 0 0 0 0
+9330162012Rik 6 0 0 0 1 2 0 1
+9330162B11Rik 0 0 0 0 0 0 0 0
+9330175E14Rik 0 1 0 0 1 0 0 0
+9330175M20Rik 1 2 2 2 0 0 1 1
+9330178D15Rik 0 1 3 0 0 1 0 0
+9330179D12Rik 0 6 6 7 3 3 6 9
+9330188P03Rik 0 0 0 0 0 0 0 0
+9430008C03Rik 8 2 0 0 1 10 3 2
+9430014N10Rik 0 0 0 0 0 0 0 0
+9430018G01Rik 2 0 0 0 0 0 0 0
+9430019J16Rik 0 0 0 0 0 0 0 0
+9430021M05Rik 0 0 0 0 0 0 0 0
+9430037G07Rik 0 0 0 0 0 0 0 0
+9430041J12Rik 0 0 0 0 0 0 0 0
+9430060I03Rik 4 3 0 0 1 1 1 0
+9430076C15Rik 0 0 1 1 0 0 0 0
+9430076G02Rik 0 0 0 0 0 0 0 0
+9430083A17Rik 3 0 0 0 0 3 1 0
+9430091E24Rik 10 2 2 2 0 16 6 4
+9530026F06Rik 0 1 0 0 0 0 0 0
+9530026P05Rik 0 3 4 4 1 4 0 4
+9530027J09Rik 0 0 0 1 0 1 0 0
+9530036O11Rik 0 3 1 1 0 0 0 1
+9530048J24Rik 0 0 0 0 0 0 0 0
+9530051G07Rik 0 0 0 0 0 0 0 0
+9530052E02Rik 2 1 1 1 1 2 2 1
+9530059O14Rik 0 0 0 0 0 0 0 0
+9530080O11Rik 2 0 0 0 1 2 0 0
+9530082P21Rik 0 0 0 0 0 3 0 1
+9530091C08Rik 1 1 0 1 0 0 0 0
+9630001P10Rik 0 0 0 0 0 0 0 0
+9630013A20Rik 0 0 0 0 0 0 0 0
+9630028B13Rik 0 0 0 0 0 2 1 0
+9630028H03Rik 0 0 0 0 0 0 0 0
+9830132P13Rik 0 0 0 0 0 0 1 0
+9830166K06Rik 0 0 0 0 0 0 0 0
+9930014A18Rik 1 0 0 1 0 3 1 2
+A030009H04Rik 0 0 0 0 0 0 0 0
+A130049A11Rik 2 0 0 1 0 5 0 0
+A130077B15Rik 0 0 0 0 0 0 0 0
+A230001M10Rik 0 0 0 0 0 0 0 0
+A230009B12Rik 0 0 1 0 0 0 0 0
+A230020J21Rik 2 1 0 1 1 0 1 2
+A230028O05Rik 0 0 0 1 0 0 0 0
+A230056J06Rik 0 0 0 0 0 0 0 0
+A230056P14Rik 0 0 0 1 0 0 0 0
+A230057D06Rik 0 0 0 2 0 0 0 1
+A230070E04Rik 0 0 0 0 0 0 0 0
+A230072C01Rik 0 0 0 0 0 2 0 0
+A230072E10Rik 0 0 0 0 0 0 1 0
+A230073K19Rik 0 1 1 0 0 0 0 1
+A230077H06Rik 0 0 0 2 0 0 0 0
+A230108P19Rik 6 0 1 1 1 9 2 1
+A330009N23Rik 0 2 0 4 0 0 0 0
+A330023F24Rik 1086 659 583 1482 625 255 739 674
+A330032B11Rik 4 0 0 2 1 1 1 0
+A330033J07Rik 0 0 1 1 0 0 0 0
+A330035P11Rik 0 0 1 0 6 4 0 0
+A330040F15Rik 1 0 0 0 1 0 0 0
+A330041J22Rik 1 0 0 0 0 0 1 0
+A330048O09Rik 0 0 0 0 0 0 0 0
+A330049N07Rik 0 0 0 1 0 0 0 0
+A330050B17Rik 0 0 0 0 0 0 0 0
+A330069E16Rik 0 0 0 0 0 0 2 0
+A330076C08Rik 0 0 0 0 0 0 0 0
+A330076H08Rik 0 0 0 0 0 0 0 0
+A330093E20Rik 3 1 1 0 0 3 0 1
+A330102I10Rik 0 0 0 0 0 0 0 0
+A430035B10Rik 0 0 0 0 0 0 0 0
+A430071A18Rik 0 0 0 0 0 2 0 2
+A430088P11Rik 0 0 0 0 0 0 0 0
+A430090L17Rik 0 0 0 0 0 0 0 0
+A430092G05Rik 0 0 0 0 0 0 0 0
+A430093F15Rik 0 1 1 1 0 1 0 0
+A530006G24Rik 0 0 0 0 0 0 0 0
+A530013C23Rik 8 0 0 0 4 0 2 0
+A530046M15Rik 0 0 0 0 0 0 0 0
+A530050N04Rik 0 0 0 0 0 0 0 0
+A530053G22Rik 0 0 0 0 0 0 0 0
+A530058N18Rik 0 0 0 0 0 0 0 0
+A530065N20Rik 1 0 0 0 0 0 1 1
+A530072M11Rik 2 0 0 0 0 0 0 1
+A530088E08Rik 0 0 0 0 0 0 0 0
+A630010A05Rik 5 2 6 5 1 0 3 2
+A630012P03Rik 2 0 0 0 0 0 0 0
+A630019I02Rik 0 3 1 4 0 0 1 3
+A630020A06 0 0 0 0 1 0 0 0
+A630023P12Rik 0 0 0 0 0 0 0 0
+A630066F11Rik 1 0 0 0 1 1 2 0
+A630072M18Rik 5 1 0 2 6 2 3 1
+A630075F10Rik 0 0 0 0 0 0 0 0
+A630077J23Rik 0 0 0 0 0 0 0 0
+A630089N07Rik 0 0 0 1 0 0 0 0
+A730017C20Rik 0 0 0 0 0 0 0 0
+A730017L22Rik 7 1 0 0 3 10 0 0
+A730018C14Rik 0 0 0 0 0 0 0 0
+A730020E08Rik 0 0 0 0 0 0 0 0
+A730020M07Rik 1 0 0 0 0 3 0 0
+A730036I17Rik 0 0 0 0 1 0 0 0
+A730043L09Rik 0 0 0 0 0 0 0 0
+A730046J19Rik 0 0 0 0 0 0 0 0
+A730056A06Rik 0 0 4 2 0 0 0 0
+A730082K24Rik 0 0 0 0 0 0 0 0
+A730085A09Rik 0 0 0 0 0 0 0 0
+A730085K08Rik 0 0 0 0 0 0 0 0
+A730090H04Rik 0 0 0 0 0 0 0 0
+A730090N16Rik 0 0 0 0 0 0 0 0
+A730098P11Rik 0 0 0 0 0 0 0 0
+A830009L08Rik 0 0 0 1 0 0 0 1
+A830019L24Rik 0 0 0 0 0 0 0 0
+A830052D11Rik 1 0 0 0 0 2 0 0
+A830082K12Rik 0 1 1 0 0 0 0 0
+A830082N09Rik 0 0 0 0 0 0 1 0
+A930001A20Rik 0 0 0 0 0 0 0 0
+A930001C03Rik 2 0 0 0 0 0 0 0
+A930003A15Rik 0 0 0 0 0 0 0 0
+A930003O13Rik 0 0 0 0 0 0 0 0
+A930004D18Rik 0 1 0 0 1 0 0 0
+A930005H10Rik 3 0 0 2 3 0 6 0
+A930006I01Rik 1 2 4 2 1 4 0 0
+A930006K02Rik 0 0 0 0 0 0 0 0
+A930007I19Rik 0 0 0 0 0 0 0 0
+A930011G23Rik 2 2 1 0 1 1 2 3
+A930011O12Rik 0 0 0 0 0 0 0 0
+A930012L18Rik 0 1 0 0 0 0 0 0
+A930013F10Rik 0 0 0 0 0 0 0 0
+A930015D03Rik 7 5 2 2 1 3 2 0
+A930016O22Rik 0 0 0 8 0 2 4 6
+A930017M01Rik 0 0 0 0 0 0 0 0
+A930019D19Rik 1 0 0 0 0 0 0 0
+A930024E05Rik 0 0 0 0 0 0 0 0
+A930041C12Rik 0 0 0 0 0 0 0 0
+AA387883 0 0 0 0 0 0 0 0
+AA388235 0 0 0 0 0 0 0 0
+AA413626 0 0 0 0 0 0 0 0
+AA465934 9 1 0 2 0 0 0 3
+AA474331 1 0 0 0 0 0 0 0
+AA536875 0 0 0 0 0 0 0 0
+AA543186 0 0 0 0 0 0 0 0
+AA543401 0 0 0 0 0 0 0 0
+AA545190 0 0 0 0 0 0 0 0
+AA619741 0 0 0 0 0 0 0 0
+AF357355 0 0 1 0 0 0 0 0
+AF357359 10 9 1 23 4 2 0 6
+AF357399 18 4 3 4 12 26 17 5
+AF357425 1 2 1 1 1 1 2 2
+AF357426 3 0 0 3 1 0 0 0
+AI115009 0 0 0 0 0 0 0 0
+AI197445 0 0 0 0 0 0 0 0
+AI314278 0 0 0 0 0 0 0 0
+AI314831 0 0 0 0 0 1 0 0
+AI414108 0 0 0 0 0 0 0 0
+AI427809 0 2 0 0 0 0 0 0
+AI450353 8 1 0 1 0 0 0 2
+AI463170 0 0 0 0 0 0 0 0
+AI504432 0 0 1 0 0 0 0 0
+AI506816 4 0 0 0 2 4 2 0
+AI507597 0 0 0 0 0 2 0 0
+AI606473 0 0 0 0 0 0 0 0
+AI646519 0 0 0 0 0 0 0 0
+AI662270 0 0 0 0 0 0 0 0
+AI839979 0 0 0 0 0 0 0 0
+AI847159 0 0 0 0 0 0 0 0
+AI854517 0 0 0 0 0 0 0 0
+AI854703 0 0 0 0 0 0 0 0
+AU015791 0 0 0 0 0 0 0 0
+AU015836 0 0 0 0 0 0 0 0
+AU016765 0 0 0 0 0 0 0 0
+AU019990 0 0 0 0 0 0 0 2
+AU021063 0 0 0 0 0 0 0 0
+AU022754 0 0 0 0 0 0 0 0
+AU022793 0 0 0 0 0 0 0 0
+AU023762 0 0 0 0 0 0 0 0
+AU040972 0 0 0 0 0 1 0 0
+AV039307 4 0 0 0 0 14 0 0
+AV051173 1 0 0 0 0 0 0 0
+AW011738 0 0 0 0 3 2 1 0
+AW046200 0 0 0 1 0 0 0 0
+AW112010 9 1 0 1 0 21 2 0
+AW495222 36 0 0 0 0 63 1 1
+AW549542 0 0 0 0 0 0 0 0
+AY512915 0 0 0 0 0 0 0 0
+AY512931 1 0 0 0 1 0 1 0
+Aanat 1 0 0 0 0 0 0 0
+Abca16 0 0 0 0 0 0 0 0
+Abhd1 5 0 0 0 0 7 1 0
+Abhd10 1 1 1 0 0 1 1 1
+Abhd11 0 0 0 2 2 2 2 0
+Adam17 8 0 2 1 1 5 3 2
+Adam28 0 1 0 0 0 0 0 0
+Adamts10 0 0 0 2 4 4 0 0
+Adarb1 6 2 0 2 0 2 0 2
+Adck5 1 0 0 1 2 1 0 1
+Adh6-ps1 1 0 0 0 0 1 1 0
+Adhfe1 11 2 0 0 2 6 4 0
+Aes 41 1 1 5 1 59 3 2
+Afg3l1 7 0 2 3 0 10 4 1
+Ager 0 0 0 0 0 0 0 0
+Ahsg 586 0 1 0 18 879 40 0
+Aire 0 0 0 0 0 0 0 0
+Airn 0 4 18 12 0 20 0 12
+Alg11 7 0 0 0 0 3 1 1
+Alg13 1 0 0 0 0 2 0 0
+Alg9 2 1 1 0 0 6 0 0
+Alms1-ps2 0 0 0 0 0 0 0 0
+Angel2 10 0 0 0 2 14 0 2
+Ank1 1580 5230 5544 7926 1242 4010 3128 5116
+Ankrd10 8 0 0 0 3 2 2 3
+Ankrd11 25 5 1 7 6 38 2 2
+Ankzf1 7 5 0 0 0 4 2 0
+Ano4 1 6 0 2 0 1 0 2
+Ano5 0 0 0 0 0 0 1 0
+Apol7d 2 0 0 0 0 2 1 0
+Apoo-ps 0 0 0 0 1 0 0 0
+Aqp9 44 0 0 0 2 107 8 0
+Arfrp1 3 0 0 0 0 4 0 0
+Arhgap1 6 3 3 0 0 6 0 0
+Arid5a 1 0 0 1 0 0 0 0
+Arrdc1 0 0 0 0 0 3 0 0
+Art2a-ps 0 0 0 0 0 0 0 0
+Asb7 3 0 0 1 0 3 0 0
+Asmt 0 0 0 0 0 0 0 0
+Atf5 17 0 0 0 1 27 5 0
+Atp10d 7 2 0 0 0 7 0 1
+Atp2a2 38 74 84 78 2 48 2 68
+Atp6v0c-ps2 0 0 0 0 0 0 1 0
+B020014A21Rik 0 0 0 0 0 0 0 0
+B020018J22Rik 0 0 0 0 0 0 0 0
+B130006D01Rik 0 0 0 0 0 0 0 1
+B130024G19Rik 0 1 1 0 1 0 0 0
+B130034C11Rik 0 0 0 0 0 0 0 0
+B230119M05Rik 0 0 0 0 0 0 0 0
+B230206H07Rik 4 0 0 0 0 1 2 0
+B230208H11Rik 24 20 18 52 28 26 44 38
+B230209E15Rik 0 0 0 0 0 0 0 0
+B230209K01Rik 0 0 0 0 0 0 0 0
+B230214G05Rik 0 0 1 0 0 0 0 0
+B230216N24Rik 0 0 0 0 0 0 0 0
+B230217O12Rik 1 0 0 1 0 1 5 1
+B230312C02Rik 0 0 0 1 0 0 0 0
+B230319C09Rik 1 1 1 0 0 1 0 0
+B230323A14Rik 0 0 0 0 0 0 0 0
+B230378P21Rik 0 0 0 0 0 0 0 0
+B330016D10Rik 1 1 1 4 0 0 0 1
+B430010I23Rik 3 0 0 0 0 2 1 0
+B430212C06Rik 0 0 0 1 0 0 0 0
+B430319G15Rik 0 3 1 2 0 0 0 0
+B4galnt1 0 0 1 1 0 1 0 0
+B4galt2 0 0 0 1 0 0 0 0
+B630019K06Rik 1 0 0 2 0 2 2 0
+B830017H08Rik 0 3 3 0 0 0 0 2
+B930003M22Rik 1 1 0 0 0 0 0 0
+B930018H19Rik 0 0 0 0 0 0 0 0
+B930025P03Rik 0 0 0 0 2 0 0 1
+B930059L03Rik 1 0 0 0 0 0 0 0
+B930092H01Rik 0 0 0 0 0 0 0 0
+BB014433 0 0 0 0 0 0 0 0
+BB019430 0 0 0 0 0 0 0 0
+BB031773 0 0 0 0 0 0 0 0
+BB123696 2 0 0 1 0 0 1 0
+BB283400 0 0 1 1 0 4 0 0
+BB557941 0 0 0 0 0 0 0 0
+BC002163 1 0 0 0 0 1 0 1
+BC005764 0 1 0 0 0 0 0 0
+BC006965 0 1 0 0 0 0 0 0
+BC018473 0 0 0 0 0 0 0 0
+BC020402 0 0 0 0 1 0 0 0
+BC021767 0 0 0 0 0 0 0 0
+BC024386 20 0 0 0 1 14 0 0
+BC024582 4 1 0 0 2 2 1 0
+BC025920 1 0 0 0 0 0 0 0
+BC029722 4 0 0 0 0 1 0 0
+BC030870 0 0 0 0 0 0 0 0
+BC031361 2 0 0 0 0 1 1 0
+BC033916 0 0 0 0 0 0 0 0
+BC037032 0 0 0 0 0 0 0 1
+BC037704 0 0 0 0 1 1 0 0
+BC039771 4 0 1 0 0 2 0 0
+BC039966 0 0 0 0 0 0 0 0
+BC048602 0 0 0 0 0 0 0 0
+BC051226 0 0 1 0 0 0 0 0
+BC051537 0 0 0 0 0 0 0 0
+BC052688 0 0 0 0 0 0 0 0
+BC055402 0 0 0 0 0 0 0 0
+BC064078 0 0 0 0 0 0 0 0
+BC065397 0 0 0 2 0 0 0 0
+BC090627 7 4 12 6 1 2 6 9
+Bambi-ps1 1 0 0 0 0 0 1 0
+Bc1 317 51 44 52 53 387 86 44
+Bend5 1 0 0 0 0 0 0 0
+Best2 0 0 0 0 0 0 0 0
+Bmp1 13 0 1 1 3 18 3 0
+Brat1 1 0 0 0 0 3 1 1
+Brd2 15 4 4 7 2 10 10 0
+Btbd19 0 1 0 0 2 0 0 1
+Btnl5 0 0 0 0 0 0 0 0
+C030007H22Rik 0 0 0 0 0 0 0 0
+C030013G03Rik 0 0 0 0 0 0 0 0
+C030016D13Rik 3 1 0 0 1 0 1 0
+C030018K13Rik 0 0 0 0 0 0 0 0
+C030023E24Rik 0 0 0 0 0 0 0 0
+C030029H02Rik 0 0 0 0 0 1 0 0
+C030034I22Rik 0 0 0 1 0 0 1 0
+C030034L19Rik 0 0 0 0 0 0 0 0
+C030037D09Rik 4 0 0 0 0 2 1 0
+C130021I20Rik 0 0 0 0 0 0 0 0
+C130026L21Rik 0 0 0 0 0 0 0 0
+C130030K03Rik 0 1 0 0 0 0 0 0
+C130036L24Rik 0 0 0 0 0 0 0 0
+C130046K22Rik 0 5 3 2 3 0 0 0
+C130060C02Rik 0 0 0 0 0 0 0 0
+C130071C03Rik 0 0 0 0 0 0 0 0
+C130080G10Rik 0 0 1 2 0 0 0 2
+C130083M11Rik 0 0 0 0 0 3 0 0
+C230004F18Rik 0 0 0 0 0 0 0 0
+C230024C17Rik 0 0 0 0 0 0 0 0
+C230035I16Rik 0 0 0 0 0 0 0 0
+C230037L18Rik 1 0 1 0 0 1 2 0
+C230079O03Rik 0 0 0 0 0 0 0 0
+C230091D08Rik 5 0 2 0 0 9 0 1
+C330008G21Rik 0 0 0 0 0 0 0 0
+C330011F03Rik 0 1 0 0 0 0 0 0
+C330013E15Rik 1 0 0 1 0 0 4 2
+C330013F16Rik 0 0 0 0 0 0 0 0
+C330022C24Rik 6 0 0 0 0 9 0 0
+C330024C12Rik 0 0 0 0 0 0 0 0
+C330024D21Rik 0 0 0 0 0 0 0 0
+C330046G13Rik 0 0 0 0 0 0 1 0
+C430002E04Rik 0 0 0 0 1 0 1 0
+C430002N11Rik 0 0 0 0 0 0 0 0
+C430049B03Rik 1996 4438 3666 7206 1654 824 1948 3984
+C4bp-ps1 0 0 0 0 0 1 0 0
+C530005A16Rik 5 0 1 0 1 4 3 1
+C530044C16Rik 0 0 0 0 0 0 0 0
+C630020P19Rik 0 0 0 0 0 0 0 0
+C630028M04Rik 0 0 0 0 0 0 0 0
+C630031E19Rik 0 0 0 0 0 0 0 0
+C630043F03Rik 0 0 0 0 1 2 0 0
+C730002L08Rik 1 0 0 1 0 2 0 1
+C730027H18Rik 1 0 0 0 1 3 0 0
+C730036E19Rik 6 0 0 0 0 3 0 0
+C86187 0 0 0 0 0 0 0 0
+C87198 0 0 0 0 0 0 0 0
+C87499 0 0 0 0 0 0 0 0
+C920006O11Rik 0 0 0 1 0 1 1 0
+C920009B18Rik 0 0 0 0 0 0 0 0
+C920021L13Rik 6 0 2 2 1 10 9 2
+Cacnb2 0 3 1 2 0 0 0 1
+Cbwd1 0 0 1 0 0 0 0 0
+Ccdc11 1 1 0 0 0 0 2 0
+Ccdc77 2 1 0 0 3 0 0 1
+Ccl25 1 0 0 0 1 4 2 0
+Cd1d2 0 0 0 0 0 0 0 0
+Cd22 0 0 0 0 0 2 0 2
+Cd40 0 1 0 3 0 0 0 0
+Cdh23 2 0 0 4 2 3 1 2
+Cdk3-ps 0 0 0 0 0 0 0 0
+Ceacam-ps1 0 0 0 0 0 0 0 0
+Cenpk 0 0 0 0 0 0 0 1
+Cep57 0 1 0 0 0 5 2 0
+Ces2d-ps 0 0 0 0 0 0 0 0
+Chka 9 0 0 0 1 9 1 0
+Chkb 14 2 2 2 2 4 0 2
+Chpt1 22 1 3 8 0 25 0 2
+Cldn25 2 0 0 0 0 8 2 0
+Clip4 0 1 4 2 0 0 0 3
+Clk1 16 6 0 8 0 18 6 0
+Cnot2 11 0 2 2 0 5 0 1
+Cops5 8 1 0 1 0 8 0 0
+Cox18 4 0 0 0 1 1 0 0
+Crebzf 21 3 0 0 3 6 9 6
+Crem 5 0 0 1 2 3 5 0
+Crxos1 0 1 0 0 0 0 0 0
+Csf3r 0 0 0 0 0 0 0 0
+Ctc1 0 0 1 1 0 1 0 0
+Ctps2 2 0 0 0 0 1 0 0
+Cts8-ps 0 0 0 0 0 0 0 0
+Cxcl11 0 0 0 0 0 0 0 0
+Cyp2c53-ps 0 0 0 0 0 1 0 0
+Cyp2d13 19 0 0 0 1 20 4 0
+Cyp2d37-ps 2 0 0 0 0 2 0 0
+Cyp3a25 76 0 0 0 30 93 27 0
+Cyp4f41-ps 0 0 0 2 1 2 0 0
+D030018L15Rik 0 0 0 0 0 0 0 0
+D030024E09Rik 0 0 0 0 0 0 0 0
+D030025E07Rik 0 0 0 0 0 0 0 0
+D030025P21Rik 0 1 0 0 0 0 0 1
+D030028A08Rik 1 0 0 0 0 5 0 0
+D030040B21Rik 0 0 0 0 0 0 0 0
+D030045P18Rik 0 0 0 0 0 0 0 0
+D030047H15Rik 0 0 0 0 0 0 0 0
+D130009I18Rik 6 0 0 3 5 1 0 0
+D130017N08Rik 0 0 0 0 0 1 0 0
+D130020L05Rik 8 4 4 0 12 16 8 0
+D130058E03 0 0 0 0 0 0 0 0
+D16Ertd519e 0 0 0 0 0 0 0 0
+D17Ertd648e 0 0 0 1 0 0 0 0
+D230030E09Rik 0 0 0 0 0 0 0 0
+D330022K07Rik 13 6 10 3 1 17 2 4
+D330023K18Rik 0 0 1 0 0 0 2 0
+D330041H03Rik 7 1 0 0 0 12 0 0
+D330050G23Rik 0 2 0 0 0 0 0 0
+D330050I16Rik 3 0 0 1 2 1 4 0
+D430020J02Rik 0 0 0 0 0 1 0 0
+D430036J16Rik 0 0 0 0 0 0 0 0
+D4Ertd617e 0 0 0 0 0 1 0 0
+D530049I02Rik 0 0 0 0 0 0 0 0
+D5Ertd605e 0 0 0 0 0 0 1 0
+D630010B17Rik 0 0 0 0 0 0 0 0
+D630013N20Rik 0 0 0 0 0 0 0 0
+D630024D03Rik 0 0 0 0 0 0 8 0
+D630029K05Rik 0 0 0 0 0 0 0 0
+D630032N06Rik 0 0 0 1 0 0 0 0
+D630041G03Rik 0 0 0 0 0 0 0 0
+D630045M09Rik 0 0 0 0 0 0 0 0
+D6Ertd474e 0 0 0 0 0 0 0 0
+D730001G18Rik 0 0 0 0 0 0 0 0
+D730005E14Rik 0 0 0 1 0 0 0 0
+D730045A05Rik 0 0 0 0 0 0 0 0
+D730050B12Rik 0 0 0 0 0 0 0 0
+D7Ertd143e 36 0 0 0 16 9 12 0
+D7Ertd715e 0 0 0 0 0 0 0 0
+D830005E20Rik 0 3 2 3 0 0 0 1
+D830013O20Rik 0 0 1 0 0 0 0 0
+D830015G02Rik 0 3 5 2 0 0 1 8
+D830026I12Rik 0 0 0 0 0 0 0 2
+D830032E09Rik 0 2 0 0 0 0 0 0
+D830046C22Rik 1 0 0 1 0 0 0 0
+D930007P13Rik 0 0 0 0 0 0 0 0
+D930015M05Rik 6 0 1 1 1 9 1 1
+D930016D06Rik 3 1 0 0 0 3 0 0
+D930028M14Rik 0 0 0 0 0 0 0 0
+D930032P07Rik 0 1 0 0 0 0 0 0
+D930048N14Rik 0 0 0 0 0 1 0 0
+DQ267100 0 0 0 0 0 2 0 0
+DQ267101 0 0 0 0 0 0 0 0
+DQ267102 0 0 0 0 0 0 0 0
+Dancr 20 0 2 5 2 12 3 4
+Dand5 1 0 0 0 1 0 0 0
+Daw1 0 1 0 0 0 0 0 0
+Dcaf11 31 1 1 0 6 57 8 1
+Dctd 0 1 0 0 0 0 0 0
+Deaf1 3 0 2 1 1 7 0 0
+Def8 5 0 0 0 1 9 1 0
+Defa-ps1 0 0 0 0 0 0 0 0
+Defa-ps12 0 0 0 0 0 0 0 0
+Defa-ps13 0 0 0 0 0 0 0 0
+Defb44-ps 0 0 0 0 0 0 0 0
+Dennd2d 1 0 0 0 0 5 0 0
+Dgkh 0 1 0 1 1 0 0 0
+Dio3os 1 1 2 0 0 2 2 1
+Dleu2 868 334 292 862 639 289 781 334
+Dlg1 11 2 2 6 1 18 3 2
+Dlk1 0 0 0 0 0 0 0 0
+Dlx1as 0 0 0 0 0 0 0 0
+Dlx6as1 0 0 0 0 0 0 0 0
+Dlx6as2 0 0 0 0 0 0 0 0
+Dmr 8 0 0 0 0 0 7 0
+Dnajc24 2 0 0 1 0 2 1 2
+Dnajc5 7 1 0 2 1 12 1 0
+Dnm1l 6 0 2 3 0 15 0 0
+Dnm3os 53 242 213 490 36 20 40 307
+Dos 2 0 0 0 0 0 1 1
+Dtnb 8 0 2 0 0 16 0 0
+E030003E18Rik 3 0 0 1 0 3 0 1
+E030011O05Rik 0 1 0 1 0 0 0 0
+E030013I19Rik 0 0 0 0 0 1 0 0
+E030019B13Rik 0 0 0 0 0 0 0 0
+E030024N20Rik 0 0 0 0 0 0 0 0
+E030025P04Rik 0 0 0 0 0 0 0 0
+E030044B06Rik 0 1 0 0 0 0 0 0
+E130006D01Rik 0 0 0 0 0 0 0 0
+E130008D07Rik 0 0 0 0 0 0 0 0
+E130018N17Rik 1 0 0 0 0 0 0 0
+E130102H24Rik 3055 1463 1381 4975 2064 3018 2188 1558
+E130112N10Rik 0 0 1 1 0 1 0 0
+E130114P18Rik 0 0 0 0 0 0 0 0
+E130201H02Rik 0 0 0 0 0 0 0 0
+E130215H24Rik 0 0 0 0 0 0 0 0
+E130218I03Rik 0 0 0 0 0 0 0 0
+E130304I02Rik 0 0 0 0 0 0 0 0
+E130307A14Rik 0 0 1 3 0 1 2 1
+E130310I04Rik 0 0 0 0 0 2 0 0
+E130317F20Rik 3 0 0 1 2 2 0 1
+E230016K23Rik 0 2 4 0 0 0 0 0
+E230016M11Rik 0 1 0 1 1 2 0 0
+E230029C05Rik 0 0 0 0 1 0 0 0
+E2f6 8 2 0 1 0 5 0 0
+E330011O21Rik 0 0 0 0 0 0 0 0
+E330012B07Rik 0 0 0 0 0 0 0 0
+E330013P04Rik 1 0 0 0 0 0 0 0
+E330017L17Rik 0 0 0 0 0 0 0 0
+E330020D12Rik 0 0 0 0 1 1 0 0
+E330023G01Rik 0 0 0 0 0 0 0 0
+E330033B04Rik 0 0 0 0 0 0 0 0
+E430016F16Rik 0 2 0 1 0 0 0 3
+E530001F21Rik 0 0 0 0 0 0 0 0
+E530011L22Rik 3 0 0 1 0 0 0 0
+Eci2 25 0 0 0 3 41 0 0
+Efcab8 0 0 0 0 0 0 0 0
+Elmo1 0 1 2 2 0 0 1 0
+Elp3 10 17 7 2 1 3 1 14
+Emx2os 0 0 0 0 0 0 0 0
+Enoph1 0 0 0 0 1 0 0 0
+Etd 0 0 0 0 0 0 0 0
+Etfb 20 0 1 1 2 29 0 0
+Etohd2 2 0 1 0 0 3 0 0
+F420014N23Rik 8 0 2 4 0 8 0 0
+F630028O10Rik 119 98 109 214 103 53 139 93
+F630042J09Rik 0 0 0 0 0 1 0 0
+F630111L10Rik 0 0 0 0 0 0 0 0
+F630206G17Rik 1 0 0 0 0 3 0 0
+F730035M05Rik 2 0 0 1 5 6 2 1
+F730043M19Rik 0 0 0 0 0 0 0 1
+F830002L21Rik 0 0 0 0 0 0 0 0
+F930015N05Rik 0 0 0 0 0 0 1 0
+Fam120aos 1 0 0 0 0 2 1 0
+Fam120b 16 0 0 2 4 15 2 0
+Fam172a 8 1 1 3 1 7 0 2
+Fam187b 0 0 0 0 1 2 2 0
+Fam19a2 0 1 0 1 1 0 0 1
+Fam19a5 0 0 0 0 0 0 0 0
+Fam214b 0 1 2 0 1 4 3 1
+Fance 0 2 0 0 0 4 0 0
+Fancl 2 0 0 0 0 0 0 0
+Fate1 0 0 0 0 0 0 0 0
+Fbxo34 4 1 1 1 3 4 0 1
+Fcho1 0 0 0 0 0 0 0 0
+Fcrla 0 0 0 0 0 0 1 0
+Fendrr 0 0 0 0 1 1 1 1
+Fgf18 0 0 0 0 0 0 0 0
+Flcn 7 0 1 3 2 8 0 1
+Flt3l 0 0 0 0 0 0 0 1
+Foxl2os 0 0 0 0 0 0 0 0
+Fth1 198 8 4 11 7 375 18 4
+Ftx 382 158 130 262 174 166 264 210
+Fuk 1 0 0 0 0 2 0 0
+Fut4-ps1 0 0 0 0 0 0 0 0
+Fut8 1 1 2 2 1 5 0 1
+Fxyd2 0 0 0 0 0 0 0 0
+G530011O06Rik 0 0 0 1 0 0 0 0
+G630025P09Rik 2 0 0 1 1 5 6 0
+G630055G22Rik 0 0 0 0 0 0 0 0
+G630071F17Rik 0 0 0 0 0 0 0 0
+G630093K05Rik 0 0 0 0 0 0 0 0
+G6b 0 0 1 0 0 0 0 0
+G730013B05Rik 6 2 2 2 0 2 0 0
+Gabpb1 1 0 0 0 0 3 2 1
+Gas5 5709 1275 1001 3375 3854 4602 3877 1194
+Gdap10 1 0 0 0 0 0 0 0
+Gm10007 0 0 0 0 0 0 0 0
+Gm10012 0 0 0 0 0 0 0 0
+Gm10033 5 0 0 4 0 1 0 0
+Gm10046 0 0 0 0 0 0 0 0
+Gm10052 0 1 0 0 0 0 1 1
+Gm10069 553 2 2 1 12 701 37 1
+Gm10125 0 2 2 1 0 1 0 0
+Gm10190 0 0 0 0 0 0 0 1
+Gm10248 0 0 0 0 0 1 0 0
+Gm10272 0 0 0 0 0 0 0 0
+Gm10280 0 1 0 0 0 0 0 0
+Gm10319 3 0 0 0 1 7 1 0
+Gm10336 0 0 0 1 0 0 1 2
+Gm10364 0 0 0 0 0 0 0 0
+Gm10373 0 0 0 0 0 0 0 0
+Gm10389 0 1 0 0 0 0 0 0
+Gm10390 0 0 0 0 2 0 1 0
+Gm10400 0 0 0 0 0 0 0 0
+Gm10409 0 0 0 0 0 0 0 0
+Gm10415 0 1 0 1 0 0 0 0
+Gm10416 0 0 0 0 0 0 0 0
+Gm10421 0 0 0 0 0 0 0 0
+Gm10432 0 1 0 1 0 0 0 1
+Gm10433 1 1 1 0 0 0 1 0
+Gm10440 0 0 0 0 0 0 0 0
+Gm10445 0 0 0 0 0 0 0 0
+Gm10451 0 0 0 0 0 0 0 0
+Gm10466 0 0 0 0 0 0 0 0
+Gm10474 0 0 0 0 0 0 0 0
+Gm10485 0 0 0 0 0 0 0 0
+Gm10494 0 0 0 0 0 0 0 0
+Gm10509 0 0 0 0 0 0 0 0
+Gm10510 0 0 0 0 0 0 0 0
+Gm10512 0 0 0 0 0 0 0 0
+Gm10516 1 0 0 0 1 0 2 0
+Gm10532 3 0 0 0 0 2 0 0
+Gm10536 0 0 0 0 0 0 0 0
+Gm10538 0 0 0 0 0 0 0 0
+Gm10548 1 0 1 2 1 1 1 1
+Gm10549 0 0 0 1 2 0 0 0
+Gm10556 0 0 0 0 0 0 0 0
+Gm10560 0 0 0 0 0 0 0 0
+Gm10578 0 0 0 0 0 0 0 0
+Gm10584 0 0 0 0 1 0 0 1
+Gm10619 0 1 0 0 0 0 0 0
+Gm10635 0 0 0 0 0 0 0 0
+Gm10636 0 0 0 0 0 0 0 1
+Gm10637 0 0 0 0 0 0 0 0
+Gm10638 0 0 0 0 1 0 0 0
+Gm10640 0 0 0 0 0 0 0 0
+Gm10649 0 2 1 0 0 1 1 1
+Gm10653 0 0 0 0 0 0 1 0
+Gm10658 2 0 0 0 1 2 0 0
+Gm10664 0 0 0 0 0 0 0 0
+Gm10677 2 0 0 0 0 1 0 0
+Gm10684 0 0 1 0 0 0 0 0
+Gm10714 0 0 0 0 0 0 0 0
+Gm10731 0 0 0 0 0 0 0 0
+Gm10745 0 0 0 0 0 0 0 0
+Gm10754 0 0 0 0 0 1 0 0
+Gm10768 26 0 0 0 0 29 4 0
+Gm10782 0 0 0 0 0 0 0 0
+Gm10785 4 0 0 3 0 0 0 0
+Gm10787 0 0 0 0 0 0 0 0
+Gm10789 0 0 0 0 0 0 1 0
+Gm10790 0 2 0 0 0 0 0 0
+Gm10791 4 0 0 0 0 6 0 0
+Gm10804 3 0 0 2 1 5 1 0
+Gm10814 0 0 0 0 0 0 0 1
+Gm10818 0 0 0 0 0 0 0 0
+Gm1082 0 0 0 0 0 0 0 0
+Gm10823 0 0 0 0 0 0 0 0
+Gm10825 0 0 0 0 0 0 0 0
+Gm10845 0 0 0 0 0 0 0 0
+Gm10857 0 0 0 0 0 0 0 0
+Gm10863 0 1 0 0 0 0 0 0
+Gm10865 0 0 0 1 2 2 2 1
+Gm10872 0 0 0 0 0 2 0 0
+Gm10941 0 0 0 0 0 0 0 0
+Gm11110 0 0 1 0 0 0 1 0
+Gm11149 0 0 1 0 0 0 0 0
+Gm11166 0 0 0 0 0 0 0 0
+Gm11186 0 0 0 0 0 0 0 0
+Gm11190 0 0 0 0 0 0 0 0
+Gm11194 0 0 1 0 0 0 0 0
+Gm11201 0 0 0 0 0 0 0 0
+Gm11202 0 0 0 0 0 0 0 0
+Gm11213 0 0 1 0 0 0 0 0
+Gm11240 0 0 0 0 0 0 0 0
+Gm11346 2 0 0 0 0 0 0 0
+Gm11351 0 0 0 0 0 0 0 0
+Gm1141 0 0 0 0 0 0 0 0
+Gm11413 0 0 0 0 0 0 0 0
+Gm11426 0 0 0 0 0 0 0 0
+Gm11468 0 0 0 0 0 0 0 0
+Gm11517 0 0 0 0 0 0 0 0
+Gm11529 0 0 0 0 0 0 0 0
+Gm11548 0 0 0 0 0 0 0 0
+Gm11549 0 0 0 0 0 0 0 0
+Gm11602 22 0 4 6 3 18 2 6
+Gm11627 0 0 0 0 0 0 0 0
+Gm11648 0 0 0 0 0 0 0 0
+Gm11696 0 0 1 0 1 0 3 0
+Gm11747 2 1 1 3 1 2 2 0
+Gm11762 0 0 0 0 0 0 1 1
+Gm11944 0 0 0 0 0 0 0 0
+Gm11961 0 0 0 0 0 0 0 0
+Gm11974 3 1 1 0 1 0 5 0
+Gm11978 0 2 0 0 0 0 0 0
+Gm11981 0 0 0 0 0 0 0 0
+Gm11985 0 0 0 0 0 0 0 0
+Gm12060 0 0 0 0 0 1 0 0
+Gm12070 0 0 0 0 0 0 0 0
+Gm12130 0 0 0 0 0 0 0 0
+Gm12159 0 0 1 0 0 0 0 0
+Gm12191 3 0 0 1 0 1 0 1
+Gm12216 5 2 2 0 1 0 4 0
+Gm12228 0 0 0 0 0 0 0 0
+Gm12238 9 2 2 2 4 11 0 2
+Gm12295 0 1 2 1 0 0 0 0
+Gm12298 0 0 0 0 0 0 0 0
+Gm12359 9 1 0 3 0 11 2 0
+Gm12360 0 0 0 0 0 0 0 0
+Gm12409 0 0 0 0 0 0 0 0
+Gm12504 0 0 0 0 0 0 0 0
+Gm12505 0 0 0 0 0 0 0 0
+Gm12522 0 0 0 0 0 0 0 0
+Gm12530 0 0 0 0 0 0 0 0
+Gm12603 0 0 0 0 0 0 0 0
+Gm12633 0 0 0 0 0 0 0 0
+Gm12669 0 1 0 1 0 1 0 0
+Gm12709 0 0 0 0 0 0 0 0
+Gm12718 2 0 0 0 1 3 0 0
+Gm12830 0 0 0 0 0 0 0 0
+Gm12839 0 0 0 0 0 0 0 0
+Gm12992 4 0 0 1 2 7 0 0
+Gm13003 0 0 0 0 0 0 0 0
+Gm13031 0 0 0 0 0 0 0 0
+Gm13032 0 1 2 0 0 0 0 0
+Gm13034 0 0 0 0 0 0 0 0
+Gm13037 0 0 0 0 0 0 0 0
+Gm13238 0 0 0 0 0 0 0 0
+Gm13293 0 0 0 0 0 0 0 0
+Gm13315 0 0 1 0 0 0 0 0
+Gm13363 0 0 0 1 1 0 0 0
+Gm13375 0 0 0 0 1 2 1 1
+Gm13399 0 0 0 0 0 0 0 0
+Gm13446 0 0 0 0 0 0 0 0
+Gm13483 2 1 1 0 0 0 0 0
+Gm13490 0 0 0 0 0 1 0 0
+Gm13497 0 0 0 0 0 1 0 0
+Gm13498 0 0 0 0 0 0 0 0
+Gm13539 0 0 0 0 0 0 0 0
+Gm13544 0 0 0 0 0 0 0 0
+Gm13546 0 0 0 0 0 0 0 0
+Gm13580 0 0 0 0 0 0 0 0
+Gm13582 0 0 0 0 0 0 0 0
+Gm13629 0 0 1 0 0 0 0 2
+Gm13704 0 0 0 0 0 0 0 0
+Gm13710 0 0 0 0 0 0 0 0
+Gm13749 0 0 0 0 0 0 0 0
+Gm13752 0 0 0 0 0 0 0 0
+Gm13807 2 0 0 0 0 0 0 0
+Gm13845 0 0 0 0 0 1 0 0
+Gm13939 0 1 0 0 0 2 0 0
+Gm13944 2 0 0 0 0 2 1 0
+Gm14005 3 6 3 5 0 8 0 1
+Gm14015 0 0 0 0 0 0 0 0
+Gm14023 0 2 0 1 0 0 0 0
+Gm14047 0 0 0 0 0 0 0 0
+Gm14057 0 0 0 0 0 0 0 0
+Gm14164 0 0 1 0 1 0 0 0
+Gm14169 0 0 0 0 0 0 0 0
+Gm14204 0 0 0 0 0 0 0 0
+Gm14207 1 2 2 5 0 0 0 1
+Gm14318 0 1 0 0 0 1 0 0
+Gm14327 0 0 0 0 0 0 0 0
+Gm14379 0 0 0 0 0 0 0 0
+Gm14403 1 0 0 0 0 5 0 0
+Gm14405 0 0 0 0 0 0 0 0
+Gm14492 0 0 0 0 0 0 3 0
+Gm14634 0 0 1 0 0 0 1 1
+Gm14635 0 0 0 0 0 0 0 0
+Gm14718 0 0 0 0 0 0 0 0
+Gm14812 0 0 0 0 0 0 0 0
+Gm14827 0 0 0 0 0 0 0 0
+Gm14858 0 0 0 0 0 0 0 0
+Gm14872 1 1 0 0 4 1 0 0
+Gm14873 0 0 0 0 0 0 0 0
+Gm15008 0 0 0 0 0 0 0 0
+Gm15133 0 0 0 0 0 0 0 0
+Gm15179 0 0 0 0 0 0 0 0
+Gm15217 1 0 0 1 0 0 0 0
+Gm15328 0 0 0 0 0 0 0 0
+Gm15348 0 0 0 0 1 2 0 0
+Gm15350 0 0 0 0 0 0 0 0
+Gm15401 0 0 0 2 0 0 0 0
+Gm15408 0 0 0 0 0 2 0 0
+Gm15412 0 0 0 0 0 0 0 0
+Gm15413 0 0 0 0 0 0 0 0
+Gm15417 4 2 3 2 4 7 13 0
+Gm15421 0 0 0 0 0 1 0 0
+Gm15441 6 6 3 3 1 11 7 6
+Gm15446 0 0 0 0 0 0 0 0
+Gm15471 0 0 0 0 0 1 0 0
+Gm15545 1 0 1 1 0 1 0 0
+Gm15612 0 0 0 0 0 1 0 0
+Gm15645 0 0 0 0 0 0 0 0
+Gm15663 0 1 0 0 0 0 0 0
+Gm15698 0 0 0 0 0 0 0 0
+Gm15706 0 0 0 0 0 1 0 0
+Gm15708 0 0 0 0 0 0 0 0
+Gm15713 1 0 2 1 0 3 0 0
+Gm15760 1 0 0 2 0 0 0 0
+Gm15772 0 0 0 0 0 2 0 0
+Gm15787 2 0 0 0 6 2 4 0
+Gm15850 0 0 4 0 0 0 0 0
+Gm15880 1 0 0 0 0 0 0 0
+Gm15910 0 0 0 0 0 0 0 2
+Gm15915 0 0 0 0 0 0 0 0
+Gm15941 0 0 0 0 0 0 0 1
+Gm15987 0 0 0 0 0 0 0 0
+Gm15997 0 1 0 0 0 0 0 0
+Gm16023 15 0 0 2 0 41 3 0
+Gm16039 8 2 3 4 2 2 4 2
+Gm16062 0 0 0 0 0 3 0 0
+Gm16063 0 0 0 0 0 0 0 0
+Gm16065 0 0 0 0 0 0 0 0
+Gm16119 1 0 0 3 4 8 8 0
+Gm16157 11 0 0 0 5 6 0 0
+Gm16197 0 0 0 0 0 1 0 0
+Gm16287 0 0 0 0 0 0 0 0
+Gm16291 2 3 2 0 1 5 0 1
+Gm16294 0 0 0 0 0 0 0 0
+Gm1631 0 0 0 0 0 0 0 0
+Gm16325 0 0 0 0 0 0 0 0
+Gm16336 0 0 0 0 0 0 0 0
+Gm16386 0 1 0 0 0 0 0 0
+Gm16497 0 0 0 0 0 0 0 0
+Gm16516 1 0 1 0 0 0 0 0
+Gm16523 0 0 0 0 0 0 0 0
+Gm1653 0 0 0 0 0 0 0 0
+Gm16548 1 0 0 0 1 3 1 0
+Gm16551 5 0 0 0 0 3 3 0
+Gm16576 0 0 0 0 0 0 0 0
+Gm16596 0 3 3 3 0 0 0 3
+Gm16617 0 0 0 0 0 0 0 0
+Gm16675 3 0 0 0 0 4 0 0
+Gm16677 0 0 0 0 0 0 0 0
+Gm16701 0 1 0 0 0 0 0 0
+Gm16702 0 0 0 0 0 0 0 0
+Gm16793 6 0 0 0 0 2 0 0
+Gm16796 0 0 0 0 0 0 0 0
+Gm16833 4 0 0 2 1 4 3 1
+Gm16845 8 0 4 4 2 6 6 0
+Gm16853 0 0 0 0 0 0 0 0
+Gm16861 4 1 0 1 1 6 1 1
+Gm16863 0 1 1 0 0 0 0 0
+Gm16880 4 0 0 0 1 2 0 0
+Gm16894 0 0 0 1 0 0 0 0
+Gm16897 0 0 0 1 0 0 1 2
+Gm16907 3 0 0 0 0 2 0 0
+Gm16938 0 0 0 0 0 0 0 0
+Gm16973 4 0 0 2 0 2 0 0
+Gm16982 0 0 0 0 0 1 0 0
+Gm16998 2 1 2 0 8 5 9 1
+Gm17066 0 0 1 0 0 2 0 0
+Gm1715 0 0 0 0 0 0 0 0
+Gm1720 0 0 0 0 0 0 0 0
+Gm17644 0 0 0 0 0 0 0 0
+Gm17745 0 0 0 1 0 0 0 1
+Gm17746 0 0 0 0 0 0 0 0
+Gm17751 0 0 0 0 0 0 0 0
+Gm17757 0 0 0 0 0 0 0 0
+Gm17762 0 1 0 0 1 0 0 0
+Gm17769 0 1 1 0 0 0 0 2
+Gm17801 0 0 0 0 0 0 0 0
+Gm17821 0 0 0 0 0 0 0 0
+Gm17830 0 0 0 0 0 0 0 0
+Gm1821 1 0 0 0 0 0 1 0
+Gm18409 0 0 0 0 0 0 0 0
+Gm18853 0 0 0 0 0 0 0 0
+Gm19276 0 0 1 0 0 0 0 0
+Gm19277 0 0 0 0 0 0 0 0
+Gm19299 0 0 0 0 0 0 0 0
+Gm19303 0 1 0 0 0 0 0 0
+Gm19395 0 0 0 0 0 0 0 0
+Gm19424 0 0 0 0 0 0 0 0
+Gm1943 0 0 0 0 0 0 0 0
+Gm19434 0 0 0 0 0 0 0 0
+Gm19461 3 0 1 0 0 7 0 0
+Gm19466 0 2 1 0 0 2 0 0
+Gm19510 0 0 0 0 0 0 0 0
+Gm19522 1 0 1 1 0 3 0 2
+Gm19557 0 0 0 1 0 0 0 0
+Gm19583 0 0 0 0 0 0 0 0
+Gm19589 0 0 0 0 0 0 0 0
+Gm19619 0 0 0 0 0 0 0 0
+Gm1968 0 0 0 0 0 0 0 0
+Gm19689 0 0 0 0 0 0 0 0
+Gm19705 0 2 2 0 0 0 0 0
+Gm19710 2 0 0 0 0 3 0 0
+Gm19757 0 0 0 0 0 0 0 0
+Gm1976 2 0 0 0 0 6 0 0
+Gm19782 2 2 1 0 0 0 0 0
+Gm19784 0 0 0 0 0 0 0 0
+Gm19897 0 0 0 0 0 0 0 0
+Gm1995 0 0 0 0 0 0 0 0
+Gm19990 0 0 0 0 0 0 0 0
+Gm20063 0 0 0 0 0 0 0 0
+Gm20098 0 0 0 0 0 0 0 0
+Gm2011 0 0 0 0 0 0 0 0
+Gm20110 0 0 0 0 0 0 0 2
+Gm20125 0 1 0 0 0 0 0 0
+Gm20139 0 0 0 2 0 0 0 0
+Gm20187 0 0 0 0 0 0 0 0
+Gm20199 0 0 0 1 0 0 0 0
+Gm20257 0 0 0 0 0 0 0 0
+Gm20268 0 0 0 0 0 0 0 0
+Gm2027 0 0 0 0 0 0 0 0
+Gm20300 2 0 0 0 0 4 0 0
+Gm20324 0 0 0 0 0 0 0 0
+Gm20337 0 0 0 0 0 0 1 0
+Gm20356 0 0 0 0 0 0 0 0
+Gm20362 0 0 0 0 0 0 0 0
+Gm20554 0 0 0 0 0 0 0 0
+Gm20556 0 0 0 0 0 0 0 0
+Gm20597 0 0 0 0 0 0 0 0
+Gm20605 4 0 0 0 1 2 0 0
+Gm2061 5 0 0 0 0 0 0 0
+Gm20611 0 0 0 0 0 0 0 0
+Gm20735 0 0 0 0 0 0 0 0
+Gm20740 0 0 0 0 0 0 0 0
+Gm20741 0 0 0 0 0 0 0 0
+Gm20743 0 0 0 0 0 0 0 0
+Gm20744 0 0 0 0 0 0 0 0
+Gm20745 0 0 1 0 0 0 0 0
+Gm20748 0 0 0 0 0 0 0 0
+Gm20750 0 0 0 0 0 0 0 0
+Gm20751 0 0 0 0 0 0 0 0
+Gm20752 0 0 0 0 0 0 0 0
+Gm20753 0 0 0 0 0 0 0 0
+Gm20754 1 0 0 1 0 0 0 0
+Gm20755 0 0 0 0 0 0 0 0
+Gm20756 0 0 0 0 0 1 0 0
+Gm20757 0 2 1 0 2 0 0 0
+Gm20758 0 0 0 0 0 0 0 0
+Gm20759 0 0 0 0 0 0 0 0
+Gm20857 0 0 0 0 0 0 0 0
+Gm20858 0 0 0 0 0 0 0 0
+Gm20871 0 0 0 0 0 0 0 0
+Gm21057 0 0 1 0 0 0 0 0
+Gm2109 0 0 0 0 0 0 0 0
+Gm2115 0 0 0 0 0 0 0 0
+Gm21221 0 0 0 0 0 0 0 0
+Gm21269 0 0 0 0 0 0 0 0
+Gm21276 0 0 0 0 0 0 0 0
+Gm21284 0 0 0 2 0 0 0 1
+Gm2176 0 0 0 0 0 0 0 0
+Gm21944 1 0 0 0 0 3 0 0
+Gm2381 0 0 0 0 0 0 0 0
+Gm2447 0 0 0 0 0 0 0 1
+Gm2516 0 0 0 0 0 0 0 0
+Gm2518 2 0 1 1 0 2 2 0
+Gm2694 0 1 0 0 0 0 0 0
+Gm2721 0 0 0 0 0 0 0 0
+Gm2762 0 1 0 0 0 0 0 0
+Gm2837 0 0 0 0 0 0 0 0
+Gm2848 0 0 0 0 0 0 0 0
+Gm3002 0 0 0 0 0 0 0 0
+Gm3020 0 0 0 0 0 0 0 0
+Gm3086 2 0 0 0 0 1 0 1
+Gm3143 0 0 0 0 0 0 0 0
+Gm3219 1 0 0 0 0 5 0 0
+Gm3230 1 0 0 0 0 5 1 0
+Gm3279 0 0 0 0 0 0 0 0
+Gm3414 1 0 0 0 0 0 0 1
+Gm3428 0 0 0 0 0 0 0 0
+Gm3434 0 0 0 0 0 0 0 0
+Gm3716 0 0 0 0 0 0 0 0
+Gm3833 0 0 0 0 0 0 0 0
+Gm3893 0 0 0 0 0 0 0 0
+Gm3925 0 0 0 0 0 0 0 0
+Gm4013 0 0 0 0 0 0 0 0
+Gm41 0 0 0 0 0 0 0 0
+Gm4224 0 0 0 0 0 0 0 0
+Gm4251 0 0 0 0 0 0 0 0
+Gm4262 0 0 0 0 0 0 0 0
+Gm4265 4 0 0 0 0 0 0 0
+Gm4278 0 0 0 0 0 0 0 0
+Gm4285 0 0 0 1 0 1 1 0
+Gm4349 0 0 0 0 0 0 0 0
+Gm4371 0 1 0 0 0 0 0 2
+Gm4432 0 0 0 0 0 0 0 0
+Gm4489 0 0 0 0 0 0 0 0
+Gm4532 1 0 1 0 0 0 0 1
+Gm4541 0 0 0 0 0 0 0 0
+Gm4566 0 0 0 0 0 0 0 0
+Gm4598 0 0 0 0 0 0 0 0
+Gm4710 0 0 0 0 0 0 0 0
+Gm4719 0 0 0 0 0 0 0 0
+Gm4759 0 0 0 0 0 0 0 0
+Gm4776 0 0 0 0 0 0 0 0
+Gm4792 0 0 0 0 0 0 0 0
+Gm4814 0 0 0 0 0 0 0 0
+Gm4827 0 0 0 0 0 0 0 0
+Gm4850 0 0 0 0 0 0 0 0
+Gm4872 0 0 0 0 0 0 0 0
+Gm4890 0 0 0 2 0 2 0 0
+Gm4926 0 0 0 0 0 0 0 0
+Gm4956 1 0 0 0 0 1 0 0
+Gm4961 0 0 0 0 0 0 0 0
+Gm4971 0 0 0 0 0 0 0 0
+Gm5 0 0 0 0 0 0 0 0
+Gm5039 0 0 0 0 0 0 0 0
+Gm5065 0 0 0 0 0 0 0 0
+Gm5069 0 0 0 0 0 0 0 0
+Gm5083 0 0 0 0 0 0 0 0
+Gm5084 0 0 0 0 0 0 0 0
+Gm5086 0 0 0 0 0 0 0 0
+Gm5088 0 0 1 1 0 0 0 2
+Gm5089 10 1 1 0 0 19 1 2
+Gm5091 0 0 0 0 0 0 0 0
+Gm5095 1 1 0 1 0 1 0 0
+Gm5105 0 3 2 2 0 0 0 0
+Gm5122 0 0 0 0 0 0 0 0
+Gm5124 0 0 0 0 0 0 0 0
+Gm5126 0 0 0 0 0 0 0 0
+Gm5129 1 0 0 1 1 0 0 0
+Gm5166 0 0 0 0 0 0 0 0
+Gm5176 0 0 0 0 0 0 2 0
+Gm5177 0 0 0 0 0 0 0 0
+Gm53 0 0 0 0 0 0 0 0
+Gm5334 0 0 0 0 0 0 0 0
+Gm5420 0 0 0 0 0 0 0 0
+Gm5424 93 1 0 0 5 77 5 0
+Gm5434 0 0 0 0 0 0 0 0
+Gm5441 0 31 33 36 0 0 1 41
+Gm5468 0 0 0 0 0 0 0 0
+Gm5475 0 0 0 0 0 0 0 0
+Gm5476 0 0 0 0 0 0 0 0
+Gm5477 0 0 0 0 0 0 0 0
+Gm5478 0 0 0 0 0 0 0 0
+Gm5480 0 0 0 0 0 0 0 0
+Gm5485 0 0 0 0 0 0 0 0
+Gm5512 7 1 1 0 0 2 1 0
+Gm5523 0 0 0 0 0 0 0 0
+Gm5547 0 0 0 0 0 0 0 0
+Gm5577 0 0 0 0 0 0 0 0
+Gm5607 0 0 0 0 0 2 0 0
+Gm5627 2 0 0 0 0 0 0 0
+Gm5643 0 0 0 0 0 0 1 1
+Gm5712 0 0 0 0 0 0 0 0
+Gm5766 0 0 0 0 0 0 0 0
+Gm5779 0 0 0 0 0 0 0 0
+Gm5801 3 0 0 0 0 0 0 0
+Gm5833 0 0 0 0 0 0 0 0
+Gm5860 0 0 1 0 0 0 0 0
+Gm5925 0 0 0 0 0 0 0 0
+Gm6042 0 0 0 0 0 0 0 0
+Gm6083 0 0 0 0 0 0 0 0
+Gm6116 0 0 1 0 0 0 0 0
+Gm6150 0 0 0 0 0 0 0 0
+Gm6194 0 0 0 0 0 0 0 0
+Gm6213 0 0 0 0 0 0 0 1
+Gm6225 0 0 0 0 3 0 3 2
+Gm6249 0 0 0 0 0 0 0 0
+Gm6260 0 0 0 0 0 0 0 0
+Gm6268 0 0 0 0 0 0 0 0
+Gm6277 1 0 0 1 1 0 0 0
+Gm6297 0 0 0 2 0 0 2 0
+Gm6300 0 0 0 0 0 0 0 0
+Gm6307 0 6 6 29 0 0 2 9
+Gm6313 0 2 1 8 0 0 0 4
+Gm6329 0 0 0 0 0 0 0 0
+Gm6367 0 0 0 0 0 0 0 0
+Gm6402 0 0 0 0 0 0 0 0
+Gm6416 0 0 0 0 0 0 0 0
+Gm6455 0 0 0 0 0 0 0 0
+Gm6498 1 0 0 0 0 1 0 0
+Gm6524 0 0 0 0 0 0 0 0
+Gm6525 0 0 0 0 0 0 0 0
+Gm6548 0 1 0 0 0 2 0 0
+Gm6567 0 0 0 0 0 0 0 0
+Gm6568 0 0 0 0 0 2 0 0
+Gm6578 0 0 0 0 0 0 0 0
+Gm6602 0 0 0 0 0 0 0 0
+Gm6607 0 0 0 0 0 0 0 0
+Gm6623 0 0 0 0 0 0 0 0
+Gm6634 0 0 0 0 0 0 0 0
+Gm6639 0 0 0 0 0 0 0 0
+Gm6642 0 0 0 0 0 0 0 0
+Gm6644 0 1 0 0 1 0 0 0
+Gm6654 0 0 0 0 0 0 0 0
+Gm6682 0 0 0 0 0 0 0 0
+Gm6756 0 0 0 0 0 0 0 0
+Gm6787 0 0 0 0 0 0 0 0
+Gm6793 4 0 1 0 0 1 0 0
+Gm6815 0 0 0 0 0 0 0 0
+Gm6936 0 0 0 0 0 0 0 0
+Gm6938 0 0 0 0 0 0 0 0
+Gm6981 3 1 0 0 0 1 3 0
+Gm6994 0 0 0 0 0 0 0 0
+Gm7008 1 0 0 0 0 1 0 0
+Gm7056 0 0 0 0 0 0 0 0
+Gm7104 0 0 0 0 0 0 0 0
+Gm7134 0 0 0 0 0 0 0 0
+Gm7271 0 0 0 0 0 0 0 0
+Gm7334 0 0 0 0 0 0 0 0
+Gm7337 0 0 0 0 0 0 0 0
+Gm7367 2 1 0 1 0 1 0 0
+Gm7444 0 0 0 0 0 0 0 0
+Gm7457 0 0 0 0 0 0 0 0
+Gm7538 0 0 0 0 0 0 0 0
+Gm7550 0 0 0 0 0 0 0 0
+Gm7854 8 1 2 1 7 1 3 0
+Gm7904 0 0 0 0 0 0 0 0
+Gm7977 0 0 0 0 0 0 0 0
+Gm805 0 0 0 1 0 0 0 0
+Gm8096 0 0 0 0 0 0 0 0
+Gm8179 0 0 0 0 0 0 0 0
+Gm8221 0 0 0 0 0 0 0 0
+Gm8234 0 0 0 0 0 0 0 0
+Gm833 0 0 0 0 0 0 0 0
+Gm8363 0 0 0 0 0 0 0 0
+Gm839 0 0 0 0 0 0 0 0
+Gm8579 0 0 0 0 0 0 0 0
+Gm8580 0 0 0 0 0 0 0 0
+Gm8615 1 0 0 0 1 3 0 0
+Gm8633 0 0 0 0 0 0 0 0
+Gm8709 0 0 0 0 0 0 0 0
+Gm872 0 0 0 0 0 0 0 0
+Gm8773 0 0 0 0 0 0 0 0
+Gm8801 0 0 0 0 0 0 0 0
+Gm8883 4 0 0 0 0 10 2 0
+Gm8884 0 0 0 0 0 0 0 0
+Gm8979 0 0 0 0 0 0 0 0
+Gm8989 0 0 0 0 0 0 0 0
+Gm9054 1 0 0 1 0 0 0 0
+Gm9079 0 0 0 0 0 0 0 0
+Gm9159 0 0 0 0 0 0 0 0
+Gm9199 0 0 0 0 0 0 0 0
+Gm9696 0 0 0 0 0 0 0 0
+Gm9731 0 0 0 0 0 0 0 0
+Gm9767 0 0 0 0 0 0 0 0
+Gm9776 1 0 0 2 4 0 0 0
+Gm9833 0 0 0 0 0 0 0 0
+Gm9855 0 0 0 0 0 0 0 0
+Gm9866 0 0 0 0 0 0 0 0
+Gm9871 0 0 0 0 0 0 0 0
+Gm9895 1 1 0 0 1 4 1 0
+Gm9899 0 1 1 2 0 0 0 1
+Gm9920 2 0 0 0 1 2 1 0
+Gm9926 0 0 0 0 0 0 0 0
+Gm9958 0 0 0 0 0 0 0 0
+Gm9961 4 0 0 1 3 1 1 0
+Gm9962 0 0 0 0 0 0 0 0
+Gm9999 0 0 0 0 0 1 4 0
+Gnas 81 7 13 7 3 65 13 9
+Gnb5 2 1 0 0 0 0 0 0
+Gorasp2 4 0 0 2 1 14 2 1
+Gpr137b-ps 1 1 1 0 0 0 0 2
+Gpr19 0 0 0 0 1 0 0 0
+Gpx2-ps1 0 0 0 0 0 0 0 0
+Grip1 0 1 0 0 0 1 0 0
+Gsdmcl-ps 1 0 0 0 0 0 0 0
+Gt(ROSA)26Sor 3 3 9 1 0 4 3 3
+H19 0 1 1 0 1 0 3 0
+H2-K2 1 0 0 0 0 3 1 0
+H2-Q5 0 0 0 0 0 0 0 0
+H2-T10 1 0 0 1 0 3 0 0
+H2afy3 0 0 0 0 0 0 0 0
+Has2as 0 0 0 0 0 0 0 0
+Hdac10 0 0 0 0 0 18 0 0
+Hgd 55 0 1 0 4 71 6 0
+Hhatl 0 0 0 1 0 0 0 0
+Hmga2-ps1 0 0 0 0 0 0 0 0
+Hmgb1-rs17 0 0 0 0 0 0 0 0
+Hotair 0 0 0 0 0 0 0 0
+Hoxa11as 0 0 0 0 0 0 0 0
+Hoxd11 0 0 0 0 0 0 0 0
+Hrh3 0 0 0 0 0 0 0 0
+Hsf4 9 0 1 1 2 2 2 0
+Hspa13 3 0 0 0 1 6 2 0
+Hyi 1 0 0 0 0 5 4 0
+I730028E13Rik 0 0 0 0 0 0 0 0
+I730030J21Rik 0 0 0 0 0 0 0 0
+Icmt 5 0 0 1 0 8 0 0
+Igf2as 0 0 0 0 0 0 0 0
+Il15ra 18 2 0 6 14 34 4 0
+Il4 0 0 0 0 0 0 0 0
+Ippk 5 1 2 1 0 4 1 1
+Ipw 0 0 1 1 0 0 0 0
+Irf3 3 1 0 0 0 1 0 0
+Jmjd4 2 1 1 0 1 7 3 0
+Jpx 1 0 0 2 2 6 1 0
+Kat5 1 0 1 0 4 5 0 1
+Kcnj15 0 0 0 0 0 0 0 0
+Kcnk2 4 1 0 0 0 0 1 1
+Kcnq1ot1 7 1 0 0 0 5 1 2
+Kctd18 0 0 0 0 0 0 0 0
+Khdrbs1 1 0 0 1 0 2 1 1
+Kif4-ps 0 0 0 0 0 0 0 0
+Kis2 0 0 0 0 2 0 0 0
+Klc2 1 0 0 0 2 1 0 1
+Klk1b7-ps 0 0 0 0 0 0 0 0
+Klra13-ps 0 0 0 0 0 0 0 0
+Klrb1-ps1 0 0 0 0 0 0 0 0
+Klrb1f 0 0 0 0 0 0 0 0
+Krit1 1 1 1 1 0 1 0 0
+Krt74 0 0 0 0 0 0 0 0
+LOC100043315 0 0 0 0 0 0 0 1
+LOC100503496 0 0 0 0 0 2 1 0
+LOC100504039 0 0 0 0 0 0 0 0
+LOC100504703 0 0 0 0 0 0 0 0
+LOC101243624 0 0 0 0 0 0 0 0
+LOC101410165 0 1 0 0 0 1 0 0
+LOC106740 0 0 0 0 0 0 0 0
+LOC171588 0 0 0 0 0 0 0 0
+Ldha 9 1 4 4 2 12 10 1
+Lilra6 0 0 0 0 0 0 0 0
+Lins 0 0 0 0 0 3 1 0
+Lmf1 4 1 3 1 0 3 0 1
+Lrp8 0 2 0 0 0 0 0 0
+Lrrc28 12 0 2 0 2 40 2 2
+Lrrc57 0 0 0 1 0 1 4 0
+Lrrtm4 0 0 0 0 0 0 0 0
+Luc7l 12 0 4 2 0 16 2 0
+Ly9 0 0 0 0 0 0 0 0
+Lypd6 0 2 1 0 0 0 0 0
+Mageb16-ps1 0 0 0 0 0 0 0 0
+Magix 0 0 0 1 1 3 0 0
+Malat1 167 36 41 25 9 201 31 50
+Map1lc3a 6 1 0 2 0 9 0 3
+March2 14 4 2 0 0 12 2 2
+Marcksl1-ps4 0 0 0 0 0 1 0 0
+Mcpt-ps1 0 0 0 0 0 0 0 0
+Mdp1 1 0 0 1 0 2 0 2
+Mea1 3 1 0 1 2 4 2 0
+Meg3 0 4 4 4 0 0 0 0
+Mgarp 0 0 0 0 0 0 0 0
+Miat 0 0 0 0 0 0 0 0
+Milr1 0 0 0 0 0 2 0 0
+Minos1 11 1 2 3 1 1 3 0
+Mipep 4 1 2 1 0 6 0 0
+Mir100 693 2238 1520 1200 566 268 603 1749
+Mir101a 3053 1460 1381 4974 2064 3015 2188 1557
+Mir101b 17063 635 544 1984 11066 16253 10901 573
+Mir101c 1 0 0 1 0 2 1 0
+Mir103-1 4 0 0 3 3 3 1 0
+Mir103-2 17 7 6 9 10 13 15 4
+Mir105 0 0 0 0 0 0 0 0
+Mir106a 0 0 0 0 2 0 0 0
+Mir106b 181 101 84 348 113 148 137 118
+Mir107 1034 175 112 413 641 704 622 142
+Mir10a 70833 35173 68923 40444 59554 43045 70877 46830
+Mir10b 3002 34668 54096 51870 1080 1189 1777 49658
+Mir1186 0 0 0 0 0 0 0 0
+Mir1186b 0 0 0 0 0 0 0 0
+Mir1187 0 0 0 0 0 0 0 0
+Mir1188 0 0 0 0 0 0 0 0
+Mir1190 0 0 0 0 0 0 0 0
+Mir1191 17 0 1 1 0 10 4 1
+Mir1192 0 0 0 0 0 0 0 0
+Mir1193 1 1 0 0 0 0 0 1
+Mir1195 37 9 6 11 17 41 12 11
+Mir1196 0 0 0 0 0 3 0 1
+Mir1197 0 0 0 0 0 0 0 0
+Mir1198 12 1 1 3 2 16 6 2
+Mir1199 1 3 1 4 1 0 0 1
+Mir1224 0 0 0 0 0 0 0 0
+Mir122a 29767 12 7 27 24233 11911 24463 8
+Mir1247 38 27 15 29 54 42 67 28
+Mir1249 19 39 39 52 29 9 16 37
+Mir124a-1 0 0 0 0 0 0 0 0
+Mir124a-2 0 0 0 0 0 0 0 0
+Mir124a-3 0 0 0 0 0 0 0 0
+Mir1251 0 0 0 0 0 0 0 0
+Mir125a 2326 7567 7389 7258 1696 731 1947 8953
+Mir125b-1 30 131 92 190 18 6 23 119
+Mir125b-2 156 771 591 1284 149 60 133 693
+Mir126 47368 70166 59307 88603 32811 17742 39170 65553
+Mir1264 0 0 0 0 0 0 0 0
+Mir127 2961 2178 2096 2262 1398 474 776 2284
+Mir128-1 19 116 82 175 20 14 24 77
+Mir128-2 0 5 0 18 1 0 1 10
+Mir129-1 1 0 0 0 1 2 0 0
+Mir129-2 0 0 0 1 0 0 0 0
+Mir1298 0 0 0 0 0 0 0 0
+Mir1306 4 1 1 6 2 2 2 2
+Mir130a 1969 1056 835 1976 1464 1104 1659 985
+Mir130b 18 18 13 27 14 8 23 14
+Mir132 38 136 125 329 22 30 28 149
+Mir133a-1 0 16 11 25 0 0 0 8
+Mir133a-2 0 1 0 1 0 0 0 0
+Mir133b 0 32 26 77 0 0 0 24
+Mir134 7 2 6 10 7 0 0 8
+Mir135a-1 1 0 0 0 0 0 0 0
+Mir135a-2 0 0 0 0 0 0 0 0
+Mir135b 0 1 0 0 0 0 0 1
+Mir136 132 80 76 300 36 13 27 89
+Mir137 13 0 0 0 8 2 6 0
+Mir138-1 0 1 0 2 0 0 0 0
+Mir138-2 0 1 0 1 0 0 0 0
+Mir139 103 79 69 217 66 74 63 80
+Mir140 1287 1205 988 3410 801 1109 831 1164
+Mir141 483 22 17 15 120 43 119 16
+Mir142 4349 1888 1187 2574 2290 1519 4278 1577
+Mir143 89792 228272 227298 428463 57040 70208 65791 232955
+Mir143hg 90501 229566 228498 430054 57480 70435 66297 234533
+Mir144 723 3833 2417 1050 468 333 1107 3778
+Mir145 705 1294 1200 1591 440 227 505 1577
+Mir146 2127 1901 1694 2555 1377 781 1758 1724
+Mir146b 0 1 1 0 0 0 0 0
+Mir147 1 0 1 1 0 0 1 0
+Mir148a 258578 26191 24636 39859 177349 256441 193465 25878
+Mir148b 1805 1070 970 1998 1321 1056 1482 1001
+Mir149 25 1399 1123 2295 9 8 16 1289
+Mir150 286 844 685 1193 99 78 170 874
+Mir152 340 255 216 670 226 206 211 274
+Mir153 0 31 32 36 0 0 1 40
+Mir154 2 2 0 6 3 0 0 5
+Mir155 14 83 79 192 3 8 9 75
+Mir15a 770 294 256 774 568 233 703 285
+Mir15b 163 121 97 231 101 87 153 111
+Mir16-1 95 39 34 87 71 50 76 47
+Mir16-2 17 18 11 26 18 9 23 11
+Mir17 96 55 36 122 63 51 76 35
+Mir17hg 32320 7428 6690 16161 24182 24856 25904 7910
+Mir18 7 7 7 8 9 4 13 7
+Mir181a-1 17 76 61 241 14 10 11 76
+Mir181a-2 78 475 398 1155 69 115 82 445
+Mir181b-1 0 5 4 5 0 0 0 5
+Mir181b-2 2 18 17 88 1 5 4 19
+Mir181c 567 3488 3113 11824 366 384 427 3436
+Mir181d 60 416 340 771 42 46 38 426
+Mir182 1655 49 26 54 879 3409 1075 42
+Mir183 156 12 2 4 71 181 130 7
+Mir1839 301 114 75 416 183 244 226 96
+Mir184 4 55 41 90 0 2 2 53
+Mir1843 524 146 133 452 386 589 431 121
+Mir1843b 272 148 109 300 196 335 243 137
+Mir185 31 39 24 161 23 16 16 21
+Mir186 2037 2945 2416 4145 1434 738 1809 2711
+Mir187 10 8 6 14 19 5 7 13
+Mir188 5 6 8 7 5 0 2 8
+Mir1892 0 0 0 1 0 1 0 0
+Mir1893 0 0 0 0 0 0 0 0
+Mir1894 0 0 0 0 0 0 0 0
+Mir1895 0 0 0 0 0 0 0 0
+Mir1896 0 0 0 0 0 0 0 0
+Mir1897 0 0 0 0 0 0 0 0
+Mir1898 0 0 0 0 0 0 0 0
+Mir1899 0 0 0 0 0 0 0 0
+Mir18b 0 0 0 0 0 0 0 0
+Mir190 10 20 19 65 9 5 10 25
+Mir1900 0 0 0 0 0 0 0 0
+Mir1901 0 0 0 0 0 0 0 0
+Mir1902 0 0 0 0 0 0 0 0
+Mir1903 0 0 0 0 0 0 0 0
+Mir1904 0 0 0 0 0 0 0 0
+Mir1905 0 0 0 0 0 0 0 0
+Mir1906-1 0 0 0 0 0 0 0 0
+Mir1906-2 0 0 0 0 0 0 0 0
+Mir1907 0 1 0 0 0 0 0 0
+Mir190b 0 2 3 8 1 0 1 4
+Mir191 22730 26548 23372 22481 18726 13095 22490 25448
+Mir1912 0 0 0 0 0 0 0 0
+Mir192 662133 3214 3163 6029 490327 630849 526600 3252
+Mir1928 0 0 0 0 0 0 0 0
+Mir1929 0 0 2 1 0 0 0 1
+Mir193 167 2 2 4 101 61 83 1
+Mir1930 0 0 0 0 0 0 0 0
+Mir1931 0 0 0 0 0 0 0 0
+Mir1932 0 0 0 0 0 0 0 0
+Mir1933 2 6 2 14 0 0 1 1
+Mir1934 2 3 1 3 0 0 0 0
+Mir1935 0 0 0 0 0 1 1 0
+Mir1936 0 0 0 0 0 0 0 0
+Mir1938 0 1 0 2 0 0 0 1
+Mir193b 8 55 45 93 4 9 8 38
+Mir194-1 220 6 13 8 160 81 141 6
+Mir194-2 1316 19 15 20 865 439 880 16
+Mir1940 2 1 1 1 1 1 1 1
+Mir1941 0 0 0 0 0 0 0 1
+Mir1942 0 0 0 0 0 0 0 0
+Mir1943 8 41 39 63 8 4 15 37
+Mir1945 2 0 1 0 0 1 1 0
+Mir1946a 0 0 0 0 0 0 0 0
+Mir1946b 2 1 1 1 0 4 3 3
+Mir1947 15 22 28 29 15 6 13 18
+Mir1948 869 2 2 3 648 259 617 4
+Mir1949 0 1 1 0 0 0 0 3
+Mir195 158 775 692 1238 112 75 120 792
+Mir1950 28 0 2 1 4 39 3 1
+Mir1951 0 0 0 0 0 0 0 0
+Mir1952 0 0 0 0 0 0 0 0
+Mir1953 0 0 0 0 0 0 0 0
+Mir1954 0 0 0 0 0 0 1 0
+Mir1955 3 1 0 0 1 1 1 0
+Mir1956 0 0 0 0 0 0 0 0
+Mir1957 0 0 0 0 0 0 0 0
+Mir1958 0 0 0 0 0 0 0 0
+Mir1960 0 6 7 15 0 1 1 6
+Mir1961 0 0 0 0 0 0 0 0
+Mir1962 0 0 0 0 0 0 0 0
+Mir1963 0 0 0 0 0 0 0 0
+Mir1964 9 22 13 19 11 8 13 10
+Mir1965 0 1 0 1 2 0 0 1
+Mir1966 2 0 1 3 1 1 0 0
+Mir1967 0 0 0 0 0 0 0 0
+Mir1968 11 0 0 4 4 8 5 1
+Mir1969 0 0 0 0 0 0 0 0
+Mir196a-1 0 0 0 0 0 0 0 0
+Mir196a-2 0 0 0 0 0 0 0 0
+Mir196b 0 2 0 2 1 0 2 3
+Mir1970 1 0 0 0 0 6 0 0
+Mir1971 0 0 0 0 0 0 0 0
+Mir1981 81 27 18 32 42 23 54 18
+Mir1982 3 0 4 1 4 2 2 1
+Mir1983 0 30 15 28 0 0 0 28
+Mir199a-1 4 3 0 2 2 4 3 0
+Mir199a-2 8 61 50 131 10 3 11 78
+Mir199b 4 73 64 143 1 0 4 81
+Mir19a 66 15 14 26 24 35 36 7
+Mir19b-1 1 0 1 0 1 0 0 0
+Mir19b-2 5 0 1 1 1 2 3 0
+Mir1a-1 0 4 5 24 0 0 0 9
+Mir1a-2 0 2 1 16 0 0 1 3
+Mir1b 0 2 1 16 0 0 1 3
+Mir200a 130 0 0 1 53 33 47 0
+Mir200b 496 4 0 3 164 66 155 0
+Mir200c 24 1 1 5 3 2 5 2
+Mir201 0 5 15 28 0 0 0 15
+Mir202 0 0 0 0 0 0 0 0
+Mir203 1919 231 243 500 1276 993 1349 228
+Mir204 5 571 549 923 2 1 9 541
+Mir205 9 0 0 0 2 0 2 0
+Mir206 0 0 0 2 0 0 2 1
+Mir207 0 0 0 0 0 0 0 0
+Mir208a 0 1060 956 1693 0 0 1 928
+Mir208b 1 2049 1647 8904 0 0 0 2155
+Mir20a 100 46 44 193 55 41 101 63
+Mir20b 2 0 1 1 0 0 0 0
+Mir21 66353 4621 3603 12563 44582 43237 50530 3631
+Mir210 70 81 45 244 20 37 36 59
+Mir211 1 0 0 1 3 1 0 0
+Mir212 13 54 34 74 4 4 14 35
+Mir2136 0 0 0 0 0 0 0 0
+Mir2137 1 2 0 0 0 0 0 3
+Mir214 45 181 163 358 26 17 29 229
+Mir215 56 207 230 393 31 28 36 201
+Mir216a 0 0 0 0 0 0 0 0
+Mir216b 0 0 0 0 0 0 0 0
+Mir217 0 0 0 1 0 0 0 0
+Mir218-1 0 1 1 3 0 0 0 2
+Mir218-2 0 0 0 2 0 0 0 1
+Mir219-1 20 6 4 21 10 7 14 8
+Mir219-2 0 1 0 0 0 0 0 0
+Mir22 264828 200828 157532 497412 178009 71407 194665 186766
+Mir221 781 737 612 1686 382 371 486 604
+Mir222 252 234 166 588 146 122 147 185
+Mir223 119 98 109 214 103 53 139 93
+Mir22hg 264833 200829 157535 497415 178026 71418 194669 186766
+Mir23a 435 1934 1611 3561 229 218 327 1803
+Mir23b 1523 2741 2199 5277 757 611 734 2545
+Mir24-1 5 33 26 69 7 6 4 39
+Mir24-2 162 644 462 1374 127 65 140 496
+Mir25 2953 1818 1415 3508 2037 3417 2635 1810
+Mir26a-1 46 46 25 66 35 13 33 38
+Mir26a-2 17 10 3 31 29 11 22 8
+Mir26b 9835 3591 3120 8413 6687 4515 7017 3488
+Mir27a 949 4009 3588 7668 628 400 760 3884
+Mir27b 49450 96357 77514 215408 34471 24893 34934 92281
+Mir28 0 0 0 0 0 0 0 0
+Mir2861 0 0 0 0 0 0 0 0
+Mir28b 0 0 0 0 0 0 0 0
+Mir28c 0 0 0 0 0 0 0 0
+Mir290 1 0 0 0 0 1 0 0
+Mir291a 10 0 0 0 8 4 2 0
+Mir291b 0 0 0 0 0 0 0 0
+Mir292 25 0 0 0 8 1 7 0
+Mir293 0 0 0 0 0 0 0 0
+Mir294 1 0 0 0 0 1 2 0
+Mir295 0 0 0 0 0 2 1 0
+Mir296 3 1 0 3 0 1 0 3
+Mir297-1 0 0 0 0 0 0 0 0
+Mir297-2 11 5 1 3 6 16 4 1
+Mir297a-3 0 5 3 12 0 1 4 7
+Mir297a-4 0 0 0 0 0 0 0 0
+Mir297b 0 0 0 0 0 0 0 0
+Mir297c 0 7 6 0 0 0 0 3
+Mir298 1 6 2 20 0 1 0 7
+Mir299 7 7 5 12 4 2 3 3
+Mir29a 4905 3937 3452 8384 3490 1455 3626 3832
+Mir29b-1 0 1 3 1 4 1 0 0
+Mir29b-2 5 3 5 15 0 2 5 6
+Mir29c 1073 655 578 1463 624 245 733 667
+Mir300 53 22 18 72 20 2 6 29
+Mir301 196 329 266 665 120 88 155 300
+Mir301b 3 4 2 1 2 1 0 1
+Mir302a 0 0 0 0 0 0 0 0
+Mir302b 0 0 0 0 0 0 0 0
+Mir302c 0 0 0 0 0 0 0 0
+Mir302d 0 0 0 0 0 0 0 0
+Mir3057 21 37 42 54 25 9 12 44
+Mir3058 0 2 3 1 0 2 1 0
+Mir3059 0 0 0 0 0 0 0 0
+Mir3060 3 1 1 8 1 0 2 3
+Mir3061 12 11 19 33 10 3 11 20
+Mir3062 0 0 0 0 0 0 0 0
+Mir3063 0 0 0 0 0 0 0 0
+Mir3064 0 0 0 0 0 0 1 2
+Mir3065 61 62 54 90 52 13 53 84
+Mir3066 0 2 1 0 2 1 0 2
+Mir3067 0 0 0 0 0 0 0 0
+Mir3068 75 47 32 151 34 36 29 27
+Mir3069 4 1 0 0 0 2 2 0
+Mir3070a 0 0 0 0 0 0 0 0
+Mir3070b 0 0 0 0 0 0 0 0
+Mir3071 132 80 76 300 36 13 27 89
+Mir3072 0 0 0 0 0 0 0 0
+Mir3073 341 0 0 0 218 131 214 0
+Mir3074-1 5 33 26 69 7 6 4 39
+Mir3074-2 162 644 462 1374 127 65 140 496
+Mir3075 0 0 0 0 0 0 0 0
+Mir3076 2 2 2 9 0 0 1 1
+Mir3077 1 0 0 0 0 0 0 0
+Mir3078 0 0 0 0 0 0 0 0
+Mir3079 0 0 0 0 0 0 0 0
+Mir3081 0 0 1 0 0 0 0 2
+Mir3082 10 15 12 24 13 11 11 16
+Mir3083 0 0 0 1 0 0 0 0
+Mir3085 0 0 0 0 0 0 0 0
+Mir3086 2 2 2 5 0 1 1 2
+Mir3087 0 3 1 1 2 0 0 1
+Mir3088 0 0 0 0 0 0 0 0
+Mir3089 0 0 2 2 0 0 0 0
+Mir3091 0 0 0 2 0 0 0 0
+Mir3092 0 0 1 0 0 1 0 0
+Mir3093 0 0 0 0 0 0 0 0
+Mir3094 0 0 0 0 0 0 0 0
+Mir3095 0 1 0 1 0 0 0 0
+Mir3096 2 0 0 0 1 2 1 0
+Mir3096b 45 54 50 161 29 34 29 33
+Mir3097 0 0 0 2 0 0 0 0
+Mir3098 66 12 15 20 20 84 35 7
+Mir3099 0 0 0 0 0 0 0 0
+Mir30a 91372 54163 51417 115733 63661 65778 70304 53479
+Mir30b 1314 1218 1113 3381 702 447 673 1163
+Mir30c-1 79 101 89 201 51 35 61 115
+Mir30c-2 224 116 88 333 139 196 168 81
+Mir30d 16033 20818 18856 57546 10892 5850 11804 19931
+Mir30e 15854 23486 20880 76780 10732 5390 11456 22218
+Mir31 716 54 38 180 381 218 444 47
+Mir3100 0 0 0 4 0 0 0 0
+Mir3101 0 0 0 0 0 0 0 0
+Mir3102 0 23 14 29 1 0 1 19
+Mir3103 0 0 0 2 1 0 1 0
+Mir3104 0 0 0 0 0 0 0 0
+Mir3106 0 0 0 0 0 0 0 0
+Mir3107 789 2612 2768 3959 621 2005 1564 2555
+Mir3108 0 0 0 0 0 0 0 0
+Mir3109 0 0 1 0 0 0 0 1
+Mir3110 0 0 0 0 0 0 0 0
+Mir3112 0 0 0 0 0 0 0 0
+Mir32 48 19 13 55 36 29 46 28
+Mir320 182 182 165 643 106 80 113 180
+Mir322 261 1359 1130 2549 228 91 224 1232
+Mir323 0 0 0 0 0 0 0 0
+Mir324 10 42 30 98 5 16 15 32
+Mir325 0 0 0 0 0 0 0 0
+Mir326 28 12 12 34 13 17 11 17
+Mir328 304 399 274 549 151 125 194 366
+Mir329 0 2 3 7 2 0 1 3
+Mir33 36 4 8 17 16 10 22 5
+Mir330 25 31 27 70 16 17 19 26
+Mir331 49 54 40 98 35 17 23 43
+Mir335 138 185 203 286 101 72 138 195
+Mir337 7 10 7 14 5 0 2 5
+Mir338 61 62 54 90 52 13 53 84
+Mir339 144 38 37 105 87 71 65 52
+Mir340 1203 288 238 1058 738 1380 755 246
+Mir341 2 1 2 2 0 2 0 1
+Mir343 0 0 0 0 0 0 0 0
+Mir344 0 0 0 0 0 0 0 0
+Mir344-2 0 0 0 0 0 0 0 0
+Mir344b 0 0 0 1 0 0 0 0
+Mir344c 0 0 0 0 0 0 0 0
+Mir344d-1 0 0 0 0 0 0 0 0
+Mir344d-2 0 0 0 0 0 0 0 0
+Mir344d-3 0 0 0 0 0 0 0 0
+Mir344e 0 0 0 0 0 0 0 0
+Mir344f 0 0 0 0 0 0 0 0
+Mir344g 0 0 0 0 0 0 0 0
+Mir345 176 125 119 273 76 83 76 114
+Mir346 0 0 0 0 0 1 0 0
+Mir3470a 23 5 1 5 2 19 5 1
+Mir3470b 46 0 4 0 27 36 19 0
+Mir3471-1 56 57 56 162 30 39 32 37
+Mir3473 1 1 1 0 1 0 1 1
+Mir3473c 0 0 0 0 0 0 0 0
+Mir3473d 0 0 0 0 0 0 0 0
+Mir3474 0 0 0 0 0 0 0 0
+Mir3475 0 0 0 0 0 0 0 0
+Mir34a 12 25 27 61 6 10 11 28
+Mir34b 3 8 6 31 0 0 0 6
+Mir34c 5 30 21 611 2 6 3 37
+Mir350 26 36 17 57 8 8 7 13
+Mir351 729 848 687 1031 591 314 745 747
+Mir3572 0 0 0 1 0 0 0 0
+Mir362 40 15 9 34 26 5 26 14
+Mir363 4 0 2 0 0 1 6 0
+Mir365-1 0 0 0 0 0 0 0 0
+Mir365-2 10 0 0 4 4 4 3 0
+Mir367 0 0 0 0 0 0 0 0
+Mir369 5 1 1 10 4 0 2 3
+Mir370 0 0 0 0 0 0 0 1
+Mir374 76 28 27 32 32 37 49 42
+Mir374c 76 28 27 32 32 37 49 42
+Mir375 46 1 1 1 27 26 21 0
+Mir376a 0 1 1 1 0 0 1 1
+Mir376b 16 2 4 11 5 1 0 3
+Mir376c 2 0 0 0 0 0 1 0
+Mir377 0 1 0 1 2 0 0 4
+Mir378 138 608 565 1901 90 123 106 544
+Mir378b 0 0 3 5 0 0 0 0
+Mir379 20 24 23 51 7 5 4 19
+Mir380 1 1 0 0 0 0 0 1
+Mir381 60 28 27 71 20 24 15 18
+Mir382 2 1 1 4 1 1 1 1
+Mir383 0 0 0 1 0 0 0 0
+Mir384 0 1 0 2 0 0 0 1
+Mir3960 0 0 0 0 0 0 0 0
+Mir3962 0 0 0 0 0 0 0 0
+Mir3963 0 0 0 0 0 0 0 0
+Mir3964 0 0 0 0 0 0 0 0
+Mir3965 0 0 0 0 0 0 0 0
+Mir3966 0 0 0 0 0 0 0 0
+Mir3967 0 0 0 0 0 0 0 0
+Mir3968 0 1 0 0 0 1 0 0
+Mir3969 0 0 0 0 0 0 0 0
+Mir3970 0 0 0 0 0 0 0 0
+Mir3971 0 0 0 0 0 0 0 0
+Mir409 26 13 8 28 14 8 8 9
+Mir410 45 24 33 47 21 9 12 17
+Mir411 514 205 226 599 202 79 119 252
+Mir412 0 0 0 0 0 0 0 0
+Mir421 0 0 0 0 0 0 0 0
+Mir423 1203 665 425 1822 1016 351 983 532
+Mir425 308 139 111 323 234 95 246 127
+Mir429 265 3 1 3 82 41 101 3
+Mir431 9 6 5 12 1 0 0 3
+Mir432 0 0 0 0 0 0 0 0
+Mir433 0 1 2 5 0 0 0 9
+Mir434 162 66 56 161 65 13 44 56
+Mir448 0 0 0 0 0 0 0 0
+Mir449a 0 0 1 3 0 0 0 1
+Mir449b 0 0 0 0 0 0 0 0
+Mir449c 0 0 1 0 0 0 0 0
+Mir450-1 0 0 0 0 0 0 0 0
+Mir450-2 0 0 0 0 0 0 2 0
+Mir450b 17 34 27 67 19 4 14 23
+Mir451 3346 2299 1479 5278 2093 2330 4863 2146
+Mir452 0 0 0 1 0 0 0 0
+Mir453 0 0 0 0 0 0 0 0
+Mir455 235 23 18 60 197 107 237 18
+Mir463 2 0 0 0 3 1 1 0
+Mir465 3 0 0 0 1 0 0 0
+Mir465b-1 0 0 0 0 0 0 0 0
+Mir465b-2 0 0 0 0 0 0 0 0
+Mir465c-1 0 0 0 0 0 0 0 0
+Mir465c-2 0 0 0 0 0 0 0 0
+Mir466 0 0 0 0 0 0 0 0
+Mir4660 7 1 3 1 0 10 1 3
+Mir466b-2 0 0 0 0 0 0 0 0
+Mir466b-3 0 0 0 0 0 0 0 0
+Mir466d 0 0 0 0 0 2 1 1
+Mir466f-1 0 1 1 0 0 0 0 0
+Mir466f-2 0 0 1 0 0 0 2 0
+Mir466f-3 53 2 1 3 4 63 6 2
+Mir466g 24 2 1 0 2 9 0 0
+Mir466h 0 0 0 0 0 0 0 0
+Mir466i 0 0 0 0 0 0 0 0
+Mir466n 23 3 1 0 4 28 1 4
+Mir467a-1 0 0 0 0 0 0 0 0
+Mir467a-10 0 0 0 0 0 0 0 0
+Mir467a-2 0 0 0 0 0 0 0 0
+Mir467a-3 0 0 0 0 0 0 0 0
+Mir467a-4 0 0 0 0 0 0 0 0
+Mir467a-5 0 0 0 0 0 0 0 0
+Mir467a-6 0 0 0 0 0 0 0 0
+Mir467a-7 0 0 0 0 0 0 0 0
+Mir467a-8 0 0 0 0 0 0 0 0
+Mir467a-9 0 0 0 0 0 0 0 0
+Mir467b 0 0 0 0 0 0 0 0
+Mir467c 12 1 0 1 3 14 3 1
+Mir467d 0 5 2 11 0 1 4 4
+Mir467e 0 0 0 0 0 0 0 0
+Mir467f 0 0 0 2 0 0 0 0
+Mir468 0 0 0 0 0 0 0 0
+Mir470 41 1 1 0 33 34 47 0
+Mir471 0 0 0 0 0 1 0 0
+Mir483 0 1 2 2 0 0 0 2
+Mir484 285 268 224 422 224 101 288 240
+Mir485 1 1 0 7 2 0 0 2
+Mir486 789 2612 2768 3959 621 2005 1564 2555
+Mir487b 0 0 1 2 0 0 1 0
+Mir488 1 26 6 34 1 1 0 9
+Mir489 0 0 0 0 0 0 0 0
+Mir490 3 353 311 750 1 0 1 322
+Mir491 0 1 1 1 0 1 1 0
+Mir493 0 1 0 0 0 0 0 0
+Mir494 0 0 0 0 0 0 0 1
+Mir495 1 1 2 2 0 0 0 1
+Mir496 4 2 0 2 2 0 2 1
+Mir497 66 198 182 195 47 27 48 200
+Mir499 0 869 730 4147 0 0 0 781
+Mir500 10 5 4 13 7 1 2 5
+Mir501 72 62 36 8 66 29 88 34
+Mir503 7 12 16 23 6 7 4 13
+Mir504 0 12 6 34 0 0 0 17
+Mir5046 0 0 0 0 0 0 0 0
+Mir505 3 2 1 1 2 2 4 1
+Mir509 0 0 0 0 0 0 0 0
+Mir5097 0 0 0 0 0 0 0 0
+Mir5098 0 0 0 0 0 0 0 0
+Mir5100 6 1 1 2 1 1 4 2
+Mir5101 0 0 0 1 0 0 0 0
+Mir5103 0 0 0 1 0 0 0 0
+Mir5104 0 0 0 0 0 0 0 0
+Mir5106 0 0 0 0 0 0 0 0
+Mir5107 1 0 0 1 0 0 1 0
+Mir5108 0 0 0 0 0 0 0 0
+Mir5109 548 29 12 106 40 478 46 23
+Mir511 57 7 9 16 35 19 36 4
+Mir5112 0 0 0 0 0 0 0 0
+Mir5113 2 1 0 1 0 2 1 1
+Mir5114 2 0 2 1 0 0 1 0
+Mir5115 0 0 0 0 0 0 0 0
+Mir5116 0 0 0 0 0 2 0 0
+Mir5117 22 11 21 39 16 14 7 23
+Mir5119 0 0 0 0 0 0 0 0
+Mir5120 0 0 0 0 0 0 0 0
+Mir5121 8 1 1 5 11 7 4 0
+Mir5122 6 3 2 2 4 1 4 3
+Mir5123 0 0 0 0 0 0 0 0
+Mir5124 0 0 0 0 0 0 0 0
+Mir5125 0 0 1 0 0 0 0 0
+Mir5126 0 0 0 0 0 0 0 0
+Mir5127 0 0 0 0 0 0 0 0
+Mir5128 7 0 0 2 0 8 1 2
+Mir5129 0 0 1 1 1 1 2 2
+Mir5130 0 0 0 1 0 1 0 0
+Mir5131 1 0 0 0 0 0 1 0
+Mir5132 0 0 0 1 0 0 1 1
+Mir5133 0 0 0 0 0 0 2 0
+Mir5134 0 0 0 0 0 0 0 0
+Mir5135 1 0 0 0 0 1 0 0
+Mir5136 0 0 0 0 0 0 0 0
+Mir532 612 227 235 434 332 528 384 258
+Mir539 0 0 0 0 0 0 0 0
+Mir540 4 2 4 8 2 0 0 5
+Mir541 483 121 124 320 188 48 123 146
+Mir542 20 23 32 75 15 23 15 22
+Mir543 0 0 1 0 0 0 0 0
+Mir544 0 0 0 0 0 0 0 0
+Mir546 0 0 0 0 0 0 0 0
+Mir547 0 15 8 10 0 0 0 9
+Mir551b 4 0 0 0 2 1 3 0
+Mir568 0 0 0 0 0 0 0 0
+Mir574 0 0 1 0 0 0 0 0
+Mir582 4 383 36 103 2 4 5 29
+Mir592 28 1 0 0 15 8 18 0
+Mir598 8 2 2 11 8 2 6 5
+Mir599 0 0 0 0 0 0 0 0
+Mir615 3 0 0 0 0 0 0 0
+Mir653 2 0 0 2 6 3 1 1
+Mir654 0 0 0 0 0 0 0 0
+Mir664 75 79 63 156 53 38 70 98
+Mir665 0 0 0 1 0 0 0 0
+Mir666 0 2 2 1 0 0 1 3
+Mir667 2 0 1 0 1 0 0 2
+Mir668 1 4 2 5 0 0 0 3
+Mir669a-1 3 2 0 2 2 1 1 3
+Mir669a-10 0 1 0 0 0 0 0 2
+Mir669a-11 0 1 0 0 0 0 0 2
+Mir669a-12 0 1 0 0 0 0 0 2
+Mir669a-2 0 0 0 0 0 0 0 0
+Mir669a-3 0 0 0 0 0 0 0 0
+Mir669a-4 0 1 0 0 0 0 0 2
+Mir669a-5 0 1 0 0 0 0 0 2
+Mir669a-6 0 1 0 0 0 0 0 2
+Mir669a-7 0 1 0 0 0 0 0 2
+Mir669a-8 0 1 0 0 0 0 0 2
+Mir669a-9 0 1 0 0 0 0 0 2
+Mir669b 0 0 2 1 0 0 0 0
+Mir669c 0 0 0 0 0 0 0 0
+Mir669e 2 0 1 1 1 4 4 0
+Mir669g 0 0 0 0 0 0 0 0
+Mir669h 0 0 0 0 0 0 0 1
+Mir669i 0 0 0 0 0 0 0 0
+Mir669j 0 0 0 0 0 0 0 0
+Mir669k 0 0 0 0 0 0 0 0
+Mir669m-1 0 0 3 0 0 0 0 0
+Mir669m-2 0 0 0 0 0 0 0 0
+Mir669p-1 0 1 0 0 0 0 0 2
+Mir669p-2 0 1 0 0 0 0 0 2
+Mir670 0 0 0 0 0 0 0 0
+Mir671 169 83 61 161 157 137 149 56
+Mir672 2 0 0 1 0 0 0 2
+Mir673 6 8 6 11 3 4 3 10
+Mir674 25 69 44 132 22 11 37 52
+Mir675 0 1 1 0 0 0 0 0
+Mir676 188 146 100 364 136 143 148 138
+Mir677 14 16 12 17 6 11 12 6
+Mir678 0 0 0 0 0 0 0 0
+Mir679 0 0 0 0 2 0 0 1
+Mir680-2 50 2 6 4 17 45 9 1
+Mir680-3 0 0 0 0 0 0 0 0
+Mir681 0 0 0 0 0 0 0 0
+Mir682 0 0 0 0 0 0 0 0
+Mir683-1 0 0 0 0 0 0 0 0
+Mir683-2 0 0 0 0 0 0 0 0
+Mir684-1 0 0 0 0 0 0 0 0
+Mir684-2 0 0 0 0 0 0 0 0
+Mir686 0 0 0 0 0 0 0 0
+Mir687 0 0 0 0 0 0 0 0
+Mir688 1 0 0 0 0 0 0 0
+Mir690 0 0 0 0 0 0 0 0
+Mir691 0 0 0 0 0 0 0 0
+Mir692-1 0 0 0 0 0 0 0 1
+Mir693 0 0 0 0 0 0 0 0
+Mir694 0 0 0 1 0 0 0 0
+Mir695 0 0 0 0 0 0 0 0
+Mir697 0 0 0 0 0 0 0 0
+Mir698 0 0 0 0 0 0 0 0
+Mir7-1 10 13 10 17 12 10 13 11
+Mir7-2 0 0 0 0 0 0 0 0
+Mir700 5 32 51 31 6 2 10 40
+Mir701 0 2 2 0 0 0 0 0
+Mir702 3 2 1 4 0 2 0 0
+Mir703 0 0 0 0 0 0 0 0
+Mir704 2 0 0 0 1 2 2 0
+Mir705 0 0 0 0 0 0 0 0
+Mir706 0 0 0 0 0 0 0 0
+Mir707 0 0 0 0 0 0 0 0
+Mir708 1 6 0 7 1 0 0 1
+Mir709 0 0 0 0 0 0 0 0
+Mir710 0 0 0 0 0 0 0 0
+Mir711 0 0 0 0 0 0 0 0
+Mir713 0 0 0 0 0 0 0 0
+Mir717 0 0 0 0 0 0 0 0
+Mir718 0 0 0 0 0 0 0 0
+Mir719 0 0 0 0 0 0 0 0
+Mir721 0 0 0 0 0 0 0 0
+Mir741 10 0 0 0 11 4 10 1
+Mir742 0 0 0 0 0 0 0 0
+Mir743 1 0 0 0 0 0 0 0
+Mir743b 3 0 0 0 1 1 2 0
+Mir744 439 148 132 510 320 187 322 117
+Mir758 0 1 0 0 2 0 0 0
+Mir759 0 0 0 0 0 0 0 0
+Mir760 1 0 1 0 0 0 0 0
+Mir761 0 0 0 0 0 0 0 0
+Mir762 0 0 0 0 0 0 0 0
+Mir764 0 0 0 0 0 0 0 0
+Mir767 0 0 0 0 0 0 0 0
+Mir770 0 0 0 0 0 0 0 0
+Mir7b 0 0 0 1 0 0 0 0
+Mir802 552 0 0 0 401 209 352 0
+Mir804 0 0 0 0 0 0 0 0
+Mir871 82 3 1 1 81 29 93 0
+Mir872 182 72 66 164 124 65 118 68
+Mir873 0 1 0 0 0 0 0 0
+Mir874 77 45 46 39 66 36 87 43
+Mir875 0 0 0 0 0 0 0 0
+Mir876 0 0 0 0 0 0 0 0
+Mir877 6 3 4 5 7 1 11 8
+Mir878 3 0 0 0 1 5 4 0
+Mir879 3 3 1 6 1 2 1 2
+Mir880 0 0 0 0 0 1 3 0
+Mir881 14 0 0 0 8 13 29 0
+Mir882 0 0 0 0 0 0 0 0
+Mir883a 1 0 0 0 0 0 0 0
+Mir883b 0 0 0 0 0 0 0 0
+Mir9-1 0 0 0 0 0 0 0 0
+Mir9-2 0 0 0 0 0 0 0 0
+Mir9-3 0 0 0 0 0 0 0 0
+Mir92-1 32320 7428 6690 16161 24182 24855 25904 7910
+Mir92-2 766 275 195 274 524 307 655 242
+Mir92b 50 32 27 60 12 9 14 33
+Mir93 1530 647 480 1397 939 691 1194 602
+Mir96 10 0 0 0 6 1 7 0
+Mir98 542 407 354 1512 256 305 374 390
+Mir99a 1194 4059 3196 2976 937 468 1037 3708
+Mir99b 2542 10307 6673 2801 2017 1131 2339 7276
+Mira 0 0 0 0 0 0 0 0
+Mirg 565 164 166 414 234 65 147 185
+Mirlet7a-1 83 29 24 89 58 36 68 32
+Mirlet7a-2 35 12 12 37 17 15 18 12
+Mirlet7b 1276 1343 1028 2983 786 655 812 1129
+Mirlet7c-1 74 69 51 151 41 45 50 55
+Mirlet7c-2 154 75 72 218 88 75 97 82
+Mirlet7d 2117 2083 1725 5400 1315 797 1470 1940
+Mirlet7e 114 233 160 648 76 64 85 196
+Mirlet7f-1 107 97 74 205 78 79 69 70
+Mirlet7f-2 2424 746 670 3360 1668 2325 2093 747
+Mirlet7g 7561 2760 2343 10488 4736 2670 5047 2547
+Mirlet7i 2525 3013 2408 9794 1507 2235 1991 2769
+Mllt10 22 4 4 2 4 26 10 4
+Mospd4 0 0 0 0 0 0 0 0
+Mphosph9 4 0 0 0 1 0 1 1
+Mrpl15 4 1 2 1 1 4 1 2
+Mrpl48 3 2 1 0 1 1 3 0
+Msx1as 0 0 0 0 0 0 0 0
+Mtag2 0 0 0 0 0 0 0 0
+Mtf2 9 1 0 3 0 1 0 1
+Mtfr1 10 0 1 1 2 22 4 0
+Mthfr 1 0 0 1 0 1 0 0
+Mtmr2 20 67 71 276 15 43 27 61
+Mug-ps1 24 0 0 0 0 7 0 0
+Mvd 0 0 0 0 0 0 0 0
+Mx1 0 0 0 0 0 0 0 0
+Mx2 0 0 0 0 0 0 0 0
+Myeov2 3 0 0 1 0 1 0 0
+Nagpa 6 1 0 1 5 7 4 0
+Ncaph2 14 1 0 0 5 16 1 2
+Ncrna00086 0 0 0 0 0 0 0 0
+Nctc1 0 1 0 0 0 0 0 0
+Ndufs6 3 0 0 1 0 5 0 1
+Neat1 21 5 7 4 1 14 7 6
+Nespas 0 1 0 0 0 0 0 0
+Ngrn 1 0 1 0 1 0 1 0
+Nip7 0 0 0 0 0 3 0 0
+Nkx2-2as 0 0 0 0 0 0 0 0
+Nkx6-2 0 1 2 1 1 0 0 0
+Nlrp1c-ps 0 0 0 0 0 0 0 0
+Nlrp5-ps 5 0 0 0 1 25 3 0
+Nnt 35 11 10 7 0 44 6 8
+Nol8 6 0 0 2 0 4 0 2
+Npff 0 0 0 0 0 0 0 0
+Nphs1as 0 0 0 0 0 0 0 0
+Npm3-ps1 0 0 0 0 0 0 0 0
+Nron 0 0 0 0 0 0 0 0
+Nt5c2 7 1 0 3 3 11 0 1
+Numb 20 4 2 6 8 30 8 2
+Nup88 3 1 1 3 0 7 0 0
+Nutf2-ps1 0 0 0 1 0 1 0 0
+Oas1b 0 0 1 0 0 2 0 0
+Oaz1-ps 5 2 6 2 11 7 4 4
+Olfr1077-ps1 0 0 0 0 0 0 0 0
+Olfr1300-ps1 0 0 0 0 0 0 0 0
+Olfr1372-ps1 0 0 0 0 0 0 0 0
+Olfr29-ps1 0 0 0 0 0 0 0 0
+Olfr421-ps1 0 0 0 0 0 0 0 0
+Olfr75-ps1 0 0 0 0 0 0 0 0
+Olfr856-ps1 0 0 0 1 0 1 0 0
+Olfr947-ps1 0 0 0 0 0 0 0 0
+Oprl1 0 0 0 0 0 0 0 0
+Orc4 1 2 0 1 1 4 0 0
+Orc6 1 1 0 0 1 1 1 0
+Osbpl1a 9 0 2 1 1 36 0 3
+Otub2 0 0 0 0 0 2 1 0
+Otx2os1 1 0 1 0 0 0 0 0
+Oxsr1 9 1 1 1 0 10 1 1
+Pafah1b1 8 3 3 2 0 16 4 4
+Parp6 8 0 2 4 0 8 2 0
+Patz1 0 0 0 2 0 0 0 0
+Pax6os1 0 0 0 0 0 0 0 0
+Pcdh11x 2 0 0 0 0 0 0 0
+Pdxk-ps 0 0 0 0 0 0 0 0
+Pea15b 0 0 0 0 0 0 0 0
+Peg13 3 0 1 1 0 4 0 2
+Peg3as 0 0 0 0 0 0 0 0
+Pex11b 4 0 0 2 0 4 0 0
+Pex16 12 0 0 1 2 7 8 0
+Pfkfb2 3 1 3 3 0 8 1 2
+Pglyrp2 12 0 0 0 0 15 0 0
+Phc1 0 0 0 0 0 1 0 0
+Phf21b 0 0 1 0 0 0 0 0
+Phxr4 0 0 0 0 0 0 0 0
+Phyhd1 5 0 0 0 1 12 2 0
+Pinc 0 1 0 1 0 0 0 1
+Pisd-ps1 0 0 0 0 0 0 0 0
+Pisd-ps2 0 0 0 1 0 0 0 0
+Pisd-ps3 4 1 1 2 0 5 2 0
+Pitpnm1 1 0 0 0 0 0 0 0
+Pknox1 6 0 0 0 2 7 1 0
+Pla2g2a 0 0 0 0 0 0 0 0
+Plcxd1 1 0 0 1 0 0 0 0
+Pldi 0 0 0 0 0 0 0 0
+Plk4 0 0 0 0 0 1 0 0
+Plscr3 1 0 1 1 1 0 0 0
+Pnpla2 10 4 1 1 1 8 5 2
+Polg2 0 0 0 0 2 2 0 0
+Ppargc1a 3 1 2 3 0 8 1 0
+Ppifos 3 0 0 2 0 6 0 4
+Ppp1r12b 0 0 2 0 0 1 0 0
+Ppp1r2-ps3 0 0 0 0 0 0 0 0
+Ppp1r2-ps7 0 0 0 0 0 0 0 0
+Ppp1r2-ps9 0 0 0 0 0 0 0 0
+Ppp2r2b 0 0 1 0 0 0 0 1
+Ppp2r3d 2 0 0 0 0 0 0 0
+Ppp4r1l-ps 2 0 0 1 0 5 0 0
+Pradc1 0 0 1 0 2 4 0 0
+Pram1 0 0 0 0 0 1 0 0
+Prl8a6 0 0 0 0 0 0 0 0
+Prmt1 5 1 0 2 0 2 0 0
+Prmt6 2 0 0 0 1 0 0 0
+Proc 28 0 0 0 2 50 3 0
+Prr18 0 0 0 0 0 0 0 0
+Prr3 0 0 0 0 0 0 0 0
+Psg-ps1 0 0 0 0 0 0 0 0
+Psmd2 19 2 0 3 0 29 3 2
+Pum2 16 1 4 2 0 26 2 1
+Pvt1 2 1 0 0 1 2 1 1
+R74862 5 0 0 1 2 3 2 2
+Rabggtb 5253 774 579 1602 3493 3501 3690 643
+Rad51d 28 8 4 12 8 28 4 0
+Ralgps2 15 1 2 0 1 10 1 0
+Ranbp3 10 0 2 0 2 5 1 1
+Rasgrp4 0 0 1 0 0 0 0 0
+Raver1-fdx1l 12 0 0 2 0 15 2 1
+Rbbp8 4 2 0 0 2 8 0 2
+Rbm18 1 2 4 0 0 3 2 0
+Rbm7 2 2 0 3 0 5 2 0
+Rbmx 48 17 9 75 33 33 12 13
+Rcbtb2 9 0 2 1 1 10 3 3
+Rchy1 4 0 1 0 1 4 1 0
+Rdh18-ps 0 0 0 0 0 2 0 0
+Rgag4 0 0 0 0 0 0 0 0
+Rhno1 0 0 2 0 0 2 0 0
+Rian 17 12 5 29 6 7 2 10
+Rit1 4 1 1 0 0 2 0 0
+Rmi1 1 1 0 1 0 4 1 0
+Rmrp 601 278 192 679 452 220 484 272
+Rmst 1 1 5 0 0 1 0 2
+Rn4.5s 0 0 0 0 0 0 0 0
+Rn45s 126292 30052 33600 12266 20627 87267 20102 30198
+Rnf126 2 1 0 0 1 1 0 0
+Rnf44 32 2 2 2 0 46 4 0
+Rnu11 104 8 12 30 11 116 8 8
+Rnu12 93 8 8 11 5 66 13 8
+Rnu6 0 0 0 0 0 0 0 0
+Rnu7 0 0 0 0 0 0 0 0
+Rnu73b 18 2 3 3 2 8 5 3
+Rpl22 14 2 0 4 0 14 4 2
+Rplp2-ps1 0 0 0 0 0 1 0 1
+Rpph1 125 10 15 40 48 103 74 15
+Rprl1 0 0 0 0 0 0 0 0
+Rprl2 0 0 0 0 0 0 0 0
+Rprl3 5 1 1 0 0 0 1 0
+Rps15a-ps4 0 0 0 0 0 0 0 0
+Rps15a-ps6 0 0 0 0 0 0 0 0
+Rps19-ps3 0 0 0 0 0 0 0 0
+Rps27 1 0 0 0 0 0 2 0
+Rps4y2 0 0 0 0 1 1 0 0
+Rreb1 46 3 4 9 3 42 4 2
+Rtel1 1 0 1 0 0 2 0 0
+Rubie 0 0 0 0 0 0 0 0
+Runx2 0 3 2 5 3 0 1 4
+Samd7 0 0 0 1 0 0 0 0
+Sapcd1 0 1 0 0 0 0 0 0
+Scarna10 7 0 2 5 3 4 1 1
+Scarna13 4 1 0 0 0 2 3 0
+Scarna17 2377 331 306 398 1752 1971 1752 337
+Scarna2 9 2 0 8 0 6 5 2
+Scarna3a 272 148 109 300 196 337 243 137
+Scarna3b 525 146 134 452 386 589 431 121
+Scarna6 589 90 88 224 500 317 495 95
+Scarna8 0 0 1 2 2 1 3 0
+Scarna9 21 10 5 3 7 8 8 5
+Scgb2b23-ps 0 0 0 0 0 0 0 0
+Schip1 0 6 6 1 0 1 0 3
+Scnn1b 0 20 5 11 0 0 0 9
+Sec14l1 0 1 0 2 0 0 0 1
+Sec16b 22 0 0 1 0 31 3 0
+Sec23b 1 1 0 0 0 5 0 0
+Sema6c 0 0 0 0 3 0 0 0
+Senp2 3 0 0 0 0 5 0 0
+Serp2 0 0 2 0 0 0 0 1
+Serpina3h 0 0 0 0 0 0 0 0
+Serpina4-ps1 145 0 0 0 19 117 14 0
+Sfpq 11 3 3 2 0 20 2 1
+Sgsm1 0 0 0 0 2 2 0 0
+Sh2d3c 2 2 3 1 0 2 1 2
+Six3os1 0 0 0 0 0 0 0 8
+Slc12a4 3 0 2 1 1 1 0 0
+Slc22a13b-ps 0 0 0 0 0 1 0 0
+Slc25a43 0 4 0 0 0 0 0 0
+Slc25a44 22 2 1 3 3 33 11 2
+Slc2a4rg-ps 0 0 0 0 0 0 2 0
+Slc35c2 2 0 0 0 0 3 0 0
+Slfn10-ps 0 0 0 0 0 0 0 0
+Slx1b 0 0 0 0 0 3 0 0
+Smarca5-ps 0 0 0 0 0 0 0 0
+Smim4 1 0 1 0 0 0 0 1
+Smok4a 0 0 0 0 0 0 0 0
+Smpx 0 0 0 2 0 0 0 2
+Snapc4 1 0 0 1 0 7 0 0
+Snhg1 8185 2277 1889 5095 5790 6478 5840 2283
+Snhg10 4 1 0 0 0 2 3 0
+Snhg12 1273 233 180 1043 811 922 743 198
+Snhg3 28 9 2 10 6 18 18 3
+Snhg4 7 4 6 11 3 3 3 10
+Snhg5 1 3 1 2 2 0 2 2
+Snhg6 390 145 138 191 236 256 215 191
+Snhg7 34 4 3 15 15 82 13 7
+Snhg8 42 7 5 14 36 19 33 8
+Snhg9 5 2 0 5 0 4 2 4
+Snora15 0 0 0 0 0 0 0 0
+Snora16a 121 12 16 75 44 113 70 13
+Snora17 32 3 3 12 9 82 8 6
+Snora19 0 0 0 0 0 0 0 0
+Snora20 4 1 0 3 1 7 2 0
+Snora21 3 2 0 3 4 4 3 1
+Snora23 8 0 0 1 0 5 0 0
+Snora24 42 7 5 14 33 19 32 8
+Snora26 6 0 1 0 2 1 2 1
+Snora28 25 3 5 5 7 13 8 5
+Snora2b 1 0 0 1 0 0 0 0
+Snora3 14 0 2 5 20 13 9 6
+Snora30 0 0 0 0 0 0 0 1
+Snora31 57 38 38 36 10 81 25 35
+Snora33 2 0 0 0 0 0 0 0
+Snora34 3 2 3 2 5 7 1 3
+Snora35 0 0 0 0 0 0 0 0
+Snora36b 76 79 63 156 53 38 70 98
+Snora41 90 32 20 85 38 25 85 19
+Snora43 1 1 0 3 2 0 0 0
+Snora44 159 76 73 81 82 107 88 58
+Snora47 4 1 1 2 1 2 1 1
+Snora52 24 4 4 13 16 23 13 8
+Snora5c 0 0 0 0 0 0 0 0
+Snora61 50 10 5 23 21 24 20 11
+Snora62 5 0 0 2 0 4 6 0
+Snora64 18 0 0 5 7 15 1 1
+Snora65 24 3 6 2 11 17 14 6
+Snora68 37 10 5 48 23 38 38 14
+Snora69 6 1 0 7 4 10 3 2
+Snora70 1 0 0 0 0 1 2 0
+Snora74a 7 2 5 11 0 2 2 7
+Snora75 4 0 0 3 0 2 0 1
+Snora78 5 2 0 5 0 4 2 4
+Snora7a 30 1 4 7 2 26 9 1
+Snora81 11 0 1 5 0 3 0 2
+Snord100 197 69 56 160 134 160 155 75
+Snord104 9351 886 720 2493 5610 7452 6017 929
+Snord11 150 8 14 47 59 53 54 14
+Snord110 443 266 226 297 338 266 373 262
+Snord111 23 6 4 13 14 10 6 6
+Snord116 0 0 0 0 0 0 0 0
+Snord116l1 0 0 0 0 0 0 0 0
+Snord116l2 0 0 0 0 0 0 0 0
+Snord118 0 0 0 0 0 0 0 0
+Snord12 534 115 104 602 380 354 356 121
+Snord123 10 16 11 42 2 6 6 9
+Snord14a 0 0 0 0 0 0 0 0
+Snord14c 0 0 0 0 0 0 0 0
+Snord14d 0 0 0 0 0 0 0 0
+Snord15a 20 4 3 5 10 9 4 2
+Snord15b 63 26 16 24 24 25 34 7
+Snord16a 136 5 5 29 24 130 30 9
+Snord17 326 116 78 148 228 85 269 110
+Snord19 366 148 118 333 314 465 338 121
+Snord1a 62 7 9 27 54 32 31 8
+Snord1b 14 3 4 4 2 5 3 2
+Snord1c 0 0 0 0 0 0 0 0
+Snord2 914 320 248 479 582 504 625 282
+Snord22 15 9 2 19 6 6 5 7
+Snord23 28 2 0 7 4 36 6 0
+Snord32a 505 164 116 501 394 378 418 170
+Snord33 649 189 195 310 598 709 602 190
+Snord34 34 4 3 13 21 15 19 1
+Snord35a 25 8 6 7 23 39 18 5
+Snord35b 5 3 1 0 1 2 3 0
+Snord37 134 39 32 89 113 74 80 44
+Snord38a 54 9 11 37 42 34 53 15
+Snord42a 61 93 100 30 31 20 35 68
+Snord42b 227 70 66 88 229 137 195 83
+Snord43 666 121 120 542 444 504 438 140
+Snord45b 620 98 72 138 458 244 499 70
+Snord45c 323 57 49 190 212 322 212 62
+Snord47 120 5 8 29 31 49 25 10
+Snord49a 232 84 51 256 151 120 145 75
+Snord49b 393 62 57 216 245 123 294 95
+Snord4a 324 50 39 155 196 165 191 31
+Snord52 4584 654 591 753 3716 3171 3941 649
+Snord53 65 21 11 57 50 23 51 12
+Snord55 462 124 101 450 309 255 250 119
+Snord57 1737 785 744 2031 1351 1445 1388 787
+Snord58b 46 85 81 3 44 29 49 57
+Snord61 46 16 8 75 31 32 12 13
+Snord64 24 22 19 48 13 19 35 17
+Snord65 29 74 90 8 17 19 15 68
+Snord66 884 267 281 340 693 807 696 244
+Snord67 39 4 1 17 18 13 11 5
+Snord68 1644 460 353 1060 1295 805 1310 376
+Snord69 440 157 105 401 341 407 333 117
+Snord7 6 1 0 1 0 0 0 2
+Snord70 23 6 11 16 10 6 14 6
+Snord71 93 20 20 38 51 26 64 29
+Snord72 159 21 24 57 102 123 101 16
+Snord73a 29 3 3 7 6 9 2 5
+Snord8 10 1 3 4 4 6 2 2
+Snord82 47 17 14 19 19 40 18 17
+Snord83b 48 22 12 35 22 34 32 16
+Snord85 3804 911 737 1422 3047 1133 3156 882
+Snord87 390 145 138 190 235 255 215 191
+Snord88a 96 69 73 77 62 101 59 52
+Snord88c 74 29 22 35 41 65 52 23
+Snord89 13 2 2 3 2 8 3 3
+Snord90 43 2 3 46 14 48 10 5
+Snord91a 363 40 29 81 256 358 285 25
+Snord92 23 9 5 17 8 29 7 8
+Snord93 45 54 50 161 29 34 29 33
+Snord95 708 217 195 326 483 675 444 210
+Snord96a 145 16 22 56 71 106 59 12
+Snord98 74 44 24 150 77 96 56 32
+Snord99 931 126 80 847 655 668 555 108
+Sox2ot 0 1 0 1 0 0 0 0
+Speer1-ps1 0 0 0 0 0 0 0 0
+Speer5-ps1 0 0 0 0 0 0 0 0
+Speer6-ps1 0 0 0 0 0 0 0 0
+Speer7-ps1 0 0 0 0 0 0 0 0
+Speer8-ps1 0 0 0 0 0 0 0 0
+Speer9-ps1 1 0 0 0 0 0 0 0
+Spn-ps 0 0 0 0 0 0 0 0
+Spns1 5 0 0 1 1 1 0 1
+Sprr2g 0 0 0 0 0 0 0 0
+Sprr2j-ps 0 0 0 0 0 0 0 0
+Sqrdl 35 1 0 1 4 58 3 0
+Sra1 7 0 0 0 2 4 6 0
+Srsf3 7 2 8 2 11 9 14 4
+Srsf7 1 1 0 0 0 5 0 1
+Srsf9 1 2 0 1 0 7 0 3
+St18 0 0 0 0 0 0 0 0
+St5 7 3 0 1 2 7 2 2
+St7l 8 1 1 1 3 12 4 2
+Stap2 10 0 2 2 1 6 4 0
+Stmn1-rs1 0 0 0 0 0 0 0 0
+Stoml1 0 0 0 0 0 0 0 0
+Stxbp3b 0 0 0 0 0 0 0 0
+Surf1 3 0 0 2 3 7 5 0
+Suv39h2 0 0 0 0 0 0 0 0
+Svip 1 0 2 0 0 1 0 0
+Syce2 6 0 0 0 0 19 1 0
+Sycp1-ps1 0 0 0 0 0 0 0 0
+Szrd1 40 4 0 2 16 40 4 2
+Taf1b 1 1 1 0 0 0 0 0
+Taf1d 357 53 56 156 174 341 230 54
+Tardbp 18 0 1 3 7 20 3 0
+Tbrg3 1 1 0 0 0 0 0 0
+Tcp10a 0 0 0 0 0 0 0 0
+Terc 22 1 0 0 18 10 15 0
+Thap6 2 0 2 2 1 1 0 0
+Tk2 1 2 0 2 1 1 3 0
+Tmem161b 0 0 0 0 2 2 4 0
+Tmem179b 8 0 0 0 0 8 0 0
+Tmem181b-ps 0 0 0 0 0 0 0 0
+Tmem181c-ps 0 0 0 0 0 0 0 0
+Tmem194b 0 0 1 0 1 0 0 0
+Tmem205 35 2 0 1 4 57 6 1
+Tmem41a 7 0 0 0 0 5 2 0
+Tmem51as1 1 0 0 0 0 2 0 0
+Tmem80 0 0 0 1 1 0 0 0
+Tor2a 2 0 0 0 0 11 3 0
+Tpsab1 0 0 0 0 0 0 0 0
+Trappc13 1 0 0 1 0 0 3 1
+Trim30e-ps1 0 0 0 0 0 0 0 0
+Trim52 0 0 0 0 0 0 0 0
+Trmt61b 11 0 0 0 2 5 0 0
+Trpc4 1 4 1 1 0 0 1 0
+Trpt1 2 0 0 0 0 2 0 0
+Trub2 0 0 0 0 0 0 0 0
+Tsix 0 0 0 0 0 4 0 0
+Tslp 0 0 0 1 0 0 0 0
+Tspy-ps 0 0 0 0 0 0 0 0
+Tsr2 0 0 1 0 0 2 0 0
+Tubb2a-ps2 0 0 0 0 0 0 0 0
+Tubgcp4 2 2 0 1 0 7 1 0
+Tug1 18 3 0 16 2 27 6 6
+Tyms 0 0 0 0 0 0 1 1
+Tyms-ps 0 0 0 0 0 0 0 0
+Tysnd1 2 0 0 0 1 7 3 0
+Tyw5 1 1 0 0 0 0 0 1
+U05342 20 0 1 3 3 24 3 0
+U90926 0 0 0 0 0 0 0 0
+Ube2w 3 1 2 1 1 3 1 0
+Ubl4 3 1 0 1 0 5 3 2
+Ubxn11 0 0 0 0 0 0 0 0
+Uchl1as 0 0 0 0 0 0 0 1
+Ufd1l 0 0 1 0 0 6 0 0
+Uqcc 5 0 2 1 0 8 1 1
+Vash2 0 0 0 0 0 0 0 0
+Vaultrc5 243 258 161 383 159 262 286 270
+Vax2os 0 0 0 0 0 0 0 0
+Vmn1r-ps79 0 0 0 0 0 0 0 0
+Vmn2r-ps11 0 0 0 1 0 0 0 0
+Vmn2r-ps129 0 0 0 0 0 0 0 0
+Vmn2r-ps159 0 0 0 0 0 0 0 0
+Vmn2r-ps54 0 0 1 0 0 0 0 0
+Vmn2r-ps60 0 0 0 0 0 0 0 0
+Vmn2r29 2 0 0 0 0 0 0 0
+Vps39 3 1 0 0 0 8 0 0
+Vsig8 194 50 35 100 99 74 109 50
+Wac 15 0 0 0 2 15 2 2
+Wbscr25 0 2 1 0 0 1 0 0
+Wdr13 2 2 1 3 0 1 0 3
+Wdr73 4 0 0 0 0 2 1 0
+Wiz 10 0 1 6 1 3 3 2
+Wls 1 1 0 3 2 0 0 1
+Wwp1 40 0 2 2 4 56 10 4
+Xist 0 0 0 0 0 8 0 0
+Yaf2 2 0 0 0 0 6 0 2
+Yars2 1 0 0 0 1 1 0 0
+Yipf2 1 0 0 1 0 10 0 0
+Ythdf3 16 4 1 4 3 19 3 2
+Zbtb24 1 0 0 1 0 0 0 0
+Zc3h14 11 1 0 0 1 2 2 2
+Zc3h7a 336 148 60 20 17 99 14 60
+Zf12 0 0 0 0 0 0 0 0
+Zfa-ps 0 0 0 0 0 0 0 0
+Zfhx2as 0 0 0 0 0 1 0 0
+Zfp133-ps 0 0 0 0 0 0 0 0
+Zfp207 5 0 2 0 0 9 1 2
+Zfp326 7 2 1 1 0 4 4 0
+Zfp389 0 0 0 0 0 0 0 0
+Zfp410 10 0 2 0 0 6 2 0
+Zfp414 1 0 0 0 0 4 0 0
+Zfp57 0 0 0 0 0 0 0 0
+Zfp572 0 0 0 0 0 0 0 0
+Zfp672 0 0 0 0 0 2 0 0
+Zfp783 0 0 0 0 0 0 0 0
+Zfp809 7 1 0 0 0 4 2 0
+Zfp821 0 0 0 2 2 0 0 0
+Zfp862 4 0 0 0 0 10 2 0
+Zim3 0 0 0 0 0 0 0 0
+Zmynd8 3 5 4 4 3 8 2 1
+Znf41-ps 0 0 0 0 0 0 0 0
+Zp4-ps 0 0 0 0 0 0 0 0
+Zscan4a 0 0 0 0 0 0 0 0
+Zxda 0 0 0 0 0 0 0 0
diff -r 5b6af671d985 -r 8051d14cf819 tool_dependencies.xml
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/tool_dependencies.xml Sun Dec 22 01:32:29 2013 -0500
@@ -0,0 +1,29 @@
+
+
+
+
+
+
+
+
+
+
+
+ $INSTALL_DIR
+ echo "source('http://bioconductor.org/biocLite.R')" > $INSTALL_DIR/runme.R
+ echo "installme=c('edgeR','limma','DESeq','DEXSeq','ggplot2','gplots')" >> $INSTALL_DIR/runme.R
+ echo "biocLite()" >> $INSTALL_DIR/runme.R
+ echo "biocLite(installme)" >> $INSTALL_DIR/runme.R
+ echo "quit(save='no')" >> $INSTALL_DIR/runme.R
+ export PATH=$PATH && export R_HOME=$R_HOME && export R_LIBS=$R_LIBS &&
+ R CMD BATCH $INSTALL_DIR/runme.R > $INSTALL_DIR/install.log
+ cat $INSTALL_DIR/install.log
+
+
+ Installs some basic bioc packages for the edgeR wrapper
+ It's clunky but this is the only way I could get anything installed into the package_r3 R
+
+
+
