Mercurial > repos > fubar > differential_count_models
view test-data/test_bams2mx.xls @ 36:b8f9b2c64202 draft
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| author | fubar |
|---|---|
| date | Sun, 22 Dec 2013 01:48:38 -0500 |
| parents | c0fa3dde02d9 |
| children |
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Contigname 11706Liv_CAAAAG_L003_R1_001_trimmed.fastq_bwa.sam.bam 11706He_AGTTCC_L001_R1_001_trimmed.fastq_bwa.sam.bam 11699He_GGCTAC_L001_R1_001_trimmed.fastq_bwa.sam.bam 11698He_TAGCTT_L001_R1_001_trimmed.fastq_bwa.sam.bam 11700Liv_ATTCCT_L003_R1_001_trimmed.fastq_bwa.sam.bam 11698Liv_ACTGAT_L003_R1_001_trimmed.fastq_bwa.sam.bam 11699Liv_ATGAGC_L003_R1_001_trimmed.fastq_bwa.sam.bam 11700He_CTTGTA_L001_R1_001_trimmed.fastq_bwa.sam.bam 0610005C13Rik 40 0 2 0 6 70 6 2 0610007N19Rik 10 17 11 42 2 6 6 10 0610008F07Rik 16 0 0 0 8 5 4 1 0610009B14Rik 0 0 0 1 0 0 0 0 0610009L18Rik 3 2 2 11 0 1 1 1 0610012G03Rik 6 0 0 0 4 5 2 0 0610031O16Rik 33 0 0 0 10 25 10 0 0610038B21Rik 0 0 0 2 0 0 0 0 0610038L08Rik 0 0 0 0 0 3 0 0 0610039K10Rik 9 0 0 1 3 1 4 3 0610040B10Rik 0 0 0 0 0 0 2 0 0610040F04Rik 2 1 0 1 2 5 2 0 0610043K17Rik 9 2 0 4 4 12 0 1 1110002L01Rik 3 1 0 0 0 0 0 0 1110006O24Rik 0 0 0 1 0 0 0 0 1110015O18Rik 0 0 0 0 0 0 0 0 1110017D15Rik 0 0 0 0 0 2 0 0 1110019D14Rik 1 1 1 0 0 0 2 0 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1 0 0 0 0 Mir666 0 2 2 1 0 0 1 3 Mir667 2 0 1 0 1 0 0 2 Mir668 1 4 2 5 0 0 0 3 Mir669a-1 3 2 0 2 2 1 1 3 Mir669a-10 0 1 0 0 0 0 0 2 Mir669a-11 0 1 0 0 0 0 0 2 Mir669a-12 0 1 0 0 0 0 0 2 Mir669a-2 0 0 0 0 0 0 0 0 Mir669a-3 0 0 0 0 0 0 0 0 Mir669a-4 0 1 0 0 0 0 0 2 Mir669a-5 0 1 0 0 0 0 0 2 Mir669a-6 0 1 0 0 0 0 0 2 Mir669a-7 0 1 0 0 0 0 0 2 Mir669a-8 0 1 0 0 0 0 0 2 Mir669a-9 0 1 0 0 0 0 0 2 Mir669b 0 0 2 1 0 0 0 0 Mir669c 0 0 0 0 0 0 0 0 Mir669e 2 0 1 1 1 4 4 0 Mir669g 0 0 0 0 0 0 0 0 Mir669h 0 0 0 0 0 0 0 1 Mir669i 0 0 0 0 0 0 0 0 Mir669j 0 0 0 0 0 0 0 0 Mir669k 0 0 0 0 0 0 0 0 Mir669m-1 0 0 3 0 0 0 0 0 Mir669m-2 0 0 0 0 0 0 0 0 Mir669p-1 0 1 0 0 0 0 0 2 Mir669p-2 0 1 0 0 0 0 0 2 Mir670 0 0 0 0 0 0 0 0 Mir671 169 83 61 161 157 137 149 56 Mir672 2 0 0 1 0 0 0 2 Mir673 6 8 6 11 3 4 3 10 Mir674 25 69 44 132 22 11 37 52 Mir675 0 1 1 0 0 0 0 0 Mir676 188 146 100 364 136 143 148 138 Mir677 14 16 12 17 6 11 12 6 Mir678 0 0 0 0 0 0 0 0 Mir679 0 0 0 0 2 0 0 1 Mir680-2 50 2 6 4 17 45 9 1 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1131 2339 7276 Mira 0 0 0 0 0 0 0 0 Mirg 565 164 166 414 234 65 147 185 Mirlet7a-1 83 29 24 89 58 36 68 32 Mirlet7a-2 35 12 12 37 17 15 18 12 Mirlet7b 1276 1343 1028 2983 786 655 812 1129 Mirlet7c-1 74 69 51 151 41 45 50 55 Mirlet7c-2 154 75 72 218 88 75 97 82 Mirlet7d 2117 2083 1725 5400 1315 797 1470 1940 Mirlet7e 114 233 160 648 76 64 85 196 Mirlet7f-1 107 97 74 205 78 79 69 70 Mirlet7f-2 2424 746 670 3360 1668 2325 2093 747 Mirlet7g 7561 2760 2343 10488 4736 2670 5047 2547 Mirlet7i 2525 3013 2408 9794 1507 2235 1991 2769 Mllt10 22 4 4 2 4 26 10 4 Mospd4 0 0 0 0 0 0 0 0 Mphosph9 4 0 0 0 1 0 1 1 Mrpl15 4 1 2 1 1 4 1 2 Mrpl48 3 2 1 0 1 1 3 0 Msx1as 0 0 0 0 0 0 0 0 Mtag2 0 0 0 0 0 0 0 0 Mtf2 9 1 0 3 0 1 0 1 Mtfr1 10 0 1 1 2 22 4 0 Mthfr 1 0 0 1 0 1 0 0 Mtmr2 20 67 71 276 15 43 27 61 Mug-ps1 24 0 0 0 0 7 0 0 Mvd 0 0 0 0 0 0 0 0 Mx1 0 0 0 0 0 0 0 0 Mx2 0 0 0 0 0 0 0 0 Myeov2 3 0 0 1 0 1 0 0 Nagpa 6 1 0 1 5 7 4 0 Ncaph2 14 1 0 0 5 16 1 2 Ncrna00086 0 0 0 0 0 0 0 0 Nctc1 0 1 0 0 0 0 0 0 Ndufs6 3 0 0 1 0 5 0 1 Neat1 21 5 7 4 1 14 7 6 Nespas 0 1 0 0 0 0 0 0 Ngrn 1 0 1 0 1 0 1 0 Nip7 0 0 0 0 0 3 0 0 Nkx2-2as 0 0 0 0 0 0 0 0 Nkx6-2 0 1 2 1 1 0 0 0 Nlrp1c-ps 0 0 0 0 0 0 0 0 Nlrp5-ps 5 0 0 0 1 25 3 0 Nnt 35 11 10 7 0 44 6 8 Nol8 6 0 0 2 0 4 0 2 Npff 0 0 0 0 0 0 0 0 Nphs1as 0 0 0 0 0 0 0 0 Npm3-ps1 0 0 0 0 0 0 0 0 Nron 0 0 0 0 0 0 0 0 Nt5c2 7 1 0 3 3 11 0 1 Numb 20 4 2 6 8 30 8 2 Nup88 3 1 1 3 0 7 0 0 Nutf2-ps1 0 0 0 1 0 1 0 0 Oas1b 0 0 1 0 0 2 0 0 Oaz1-ps 5 2 6 2 11 7 4 4 Olfr1077-ps1 0 0 0 0 0 0 0 0 Olfr1300-ps1 0 0 0 0 0 0 0 0 Olfr1372-ps1 0 0 0 0 0 0 0 0 Olfr29-ps1 0 0 0 0 0 0 0 0 Olfr421-ps1 0 0 0 0 0 0 0 0 Olfr75-ps1 0 0 0 0 0 0 0 0 Olfr856-ps1 0 0 0 1 0 1 0 0 Olfr947-ps1 0 0 0 0 0 0 0 0 Oprl1 0 0 0 0 0 0 0 0 Orc4 1 2 0 1 1 4 0 0 Orc6 1 1 0 0 1 1 1 0 Osbpl1a 9 0 2 1 1 36 0 3 Otub2 0 0 0 0 0 2 1 0 Otx2os1 1 0 1 0 0 0 0 0 Oxsr1 9 1 1 1 0 10 1 1 Pafah1b1 8 3 3 2 0 16 4 4 Parp6 8 0 2 4 0 8 2 0 Patz1 0 0 0 2 0 0 0 0 Pax6os1 0 0 0 0 0 0 0 0 Pcdh11x 2 0 0 0 0 0 0 0 Pdxk-ps 0 0 0 0 0 0 0 0 Pea15b 0 0 0 0 0 0 0 0 Peg13 3 0 1 1 0 4 0 2 Peg3as 0 0 0 0 0 0 0 0 Pex11b 4 0 0 2 0 4 0 0 Pex16 12 0 0 1 2 7 8 0 Pfkfb2 3 1 3 3 0 8 1 2 Pglyrp2 12 0 0 0 0 15 0 0 Phc1 0 0 0 0 0 1 0 0 Phf21b 0 0 1 0 0 0 0 0 Phxr4 0 0 0 0 0 0 0 0 Phyhd1 5 0 0 0 1 12 2 0 Pinc 0 1 0 1 0 0 0 1 Pisd-ps1 0 0 0 0 0 0 0 0 Pisd-ps2 0 0 0 1 0 0 0 0 Pisd-ps3 4 1 1 2 0 5 2 0 Pitpnm1 1 0 0 0 0 0 0 0 Pknox1 6 0 0 0 2 7 1 0 Pla2g2a 0 0 0 0 0 0 0 0 Plcxd1 1 0 0 1 0 0 0 0 Pldi 0 0 0 0 0 0 0 0 Plk4 0 0 0 0 0 1 0 0 Plscr3 1 0 1 1 1 0 0 0 Pnpla2 10 4 1 1 1 8 5 2 Polg2 0 0 0 0 2 2 0 0 Ppargc1a 3 1 2 3 0 8 1 0 Ppifos 3 0 0 2 0 6 0 4 Ppp1r12b 0 0 2 0 0 1 0 0 Ppp1r2-ps3 0 0 0 0 0 0 0 0 Ppp1r2-ps7 0 0 0 0 0 0 0 0 Ppp1r2-ps9 0 0 0 0 0 0 0 0 Ppp2r2b 0 0 1 0 0 0 0 1 Ppp2r3d 2 0 0 0 0 0 0 0 Ppp4r1l-ps 2 0 0 1 0 5 0 0 Pradc1 0 0 1 0 2 4 0 0 Pram1 0 0 0 0 0 1 0 0 Prl8a6 0 0 0 0 0 0 0 0 Prmt1 5 1 0 2 0 2 0 0 Prmt6 2 0 0 0 1 0 0 0 Proc 28 0 0 0 2 50 3 0 Prr18 0 0 0 0 0 0 0 0 Prr3 0 0 0 0 0 0 0 0 Psg-ps1 0 0 0 0 0 0 0 0 Psmd2 19 2 0 3 0 29 3 2 Pum2 16 1 4 2 0 26 2 1 Pvt1 2 1 0 0 1 2 1 1 R74862 5 0 0 1 2 3 2 2 Rabggtb 5253 774 579 1602 3493 3501 3690 643 Rad51d 28 8 4 12 8 28 4 0 Ralgps2 15 1 2 0 1 10 1 0 Ranbp3 10 0 2 0 2 5 1 1 Rasgrp4 0 0 1 0 0 0 0 0 Raver1-fdx1l 12 0 0 2 0 15 2 1 Rbbp8 4 2 0 0 2 8 0 2 Rbm18 1 2 4 0 0 3 2 0 Rbm7 2 2 0 3 0 5 2 0 Rbmx 48 17 9 75 33 33 12 13 Rcbtb2 9 0 2 1 1 10 3 3 Rchy1 4 0 1 0 1 4 1 0 Rdh18-ps 0 0 0 0 0 2 0 0 Rgag4 0 0 0 0 0 0 0 0 Rhno1 0 0 2 0 0 2 0 0 Rian 17 12 5 29 6 7 2 10 Rit1 4 1 1 0 0 2 0 0 Rmi1 1 1 0 1 0 4 1 0 Rmrp 601 278 192 679 452 220 484 272 Rmst 1 1 5 0 0 1 0 2 Rn4.5s 0 0 0 0 0 0 0 0 Rn45s 126292 30052 33600 12266 20627 87267 20102 30198 Rnf126 2 1 0 0 1 1 0 0 Rnf44 32 2 2 2 0 46 4 0 Rnu11 104 8 12 30 11 116 8 8 Rnu12 93 8 8 11 5 66 13 8 Rnu6 0 0 0 0 0 0 0 0 Rnu7 0 0 0 0 0 0 0 0 Rnu73b 18 2 3 3 2 8 5 3 Rpl22 14 2 0 4 0 14 4 2 Rplp2-ps1 0 0 0 0 0 1 0 1 Rpph1 125 10 15 40 48 103 74 15 Rprl1 0 0 0 0 0 0 0 0 Rprl2 0 0 0 0 0 0 0 0 Rprl3 5 1 1 0 0 0 1 0 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5 29 24 130 30 9 Snord17 326 116 78 148 228 85 269 110 Snord19 366 148 118 333 314 465 338 121 Snord1a 62 7 9 27 54 32 31 8 Snord1b 14 3 4 4 2 5 3 2 Snord1c 0 0 0 0 0 0 0 0 Snord2 914 320 248 479 582 504 625 282 Snord22 15 9 2 19 6 6 5 7 Snord23 28 2 0 7 4 36 6 0 Snord32a 505 164 116 501 394 378 418 170 Snord33 649 189 195 310 598 709 602 190 Snord34 34 4 3 13 21 15 19 1 Snord35a 25 8 6 7 23 39 18 5 Snord35b 5 3 1 0 1 2 3 0 Snord37 134 39 32 89 113 74 80 44 Snord38a 54 9 11 37 42 34 53 15 Snord42a 61 93 100 30 31 20 35 68 Snord42b 227 70 66 88 229 137 195 83 Snord43 666 121 120 542 444 504 438 140 Snord45b 620 98 72 138 458 244 499 70 Snord45c 323 57 49 190 212 322 212 62 Snord47 120 5 8 29 31 49 25 10 Snord49a 232 84 51 256 151 120 145 75 Snord49b 393 62 57 216 245 123 294 95 Snord4a 324 50 39 155 196 165 191 31 Snord52 4584 654 591 753 3716 3171 3941 649 Snord53 65 21 11 57 50 23 51 12 Snord55 462 124 101 450 309 255 250 119 Snord57 1737 785 744 2031 1351 1445 1388 787 Snord58b 46 85 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