Mercurial > repos > fubar > differential_count_models
diff rgedgeR/rgedgeRpaired.xml @ 14:8272815ba8ce draft
Uploaded
| author | fubar |
|---|---|
| date | Sat, 27 Jul 2013 02:20:54 -0400 |
| parents | f542654faa3b |
| children | 993d35bcf98c |
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--- a/rgedgeR/rgedgeRpaired.xml Sat Jul 27 02:18:41 2013 -0400 +++ b/rgedgeR/rgedgeRpaired.xml Sat Jul 27 02:20:54 2013 -0400 @@ -671,7 +671,7 @@ history_gmt="" out_edgeR = F out_DESeq2 = F -out_VOOM = "${out_VOOM}" +out_VOOM = "$out_VOOM" doDESeq2 = $DESeq2.doDESeq2 # make these T or F doVoom = $doVoom doCamera = F @@ -679,18 +679,18 @@ edgeR_priordf = 0 -#if ${doVoom} == "T": - out_VOOM = "${out_VOOM}" +#if $doVoom == "T": + out_VOOM = "$out_VOOM" #end if -#if ${DESeq2.doDESeq2} == "T": - out_DESeq2 = "${out_DESeq2}" - DESeq_fitType = "${DESeq2.DESeq_fitType}" +#if $DESeq2.doDESeq2 == "T": + out_DESeq2 = "$out_DESeq2" + DESeq_fitType = "$DESeq2.DESeq_fitType" #end if -#if ${edgeR.doedgeR} == "T": - out_edgeR = "${out_edgeR}" - edgeR_priordf = ${edgeR.edgeR_priordf} +#if $edgeR.doedgeR == "T": + out_edgeR = "$out_edgeR" + edgeR_priordf = $edgeR.edgeR_priordf #end if Out_Dir = "$html_file.files_path"