Mercurial > repos > fubar > differential_count_models

comparison rgedgeR/rgedgeRpaired.xml @ 1:df4fea3be1b3 draft

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author fubar
date Sat, 27 Jul 2013 00:17:06 -0400
parents 2122e630b13a
children a612f61ff3b6
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0:2122e630b13a 1:df4fea3be1b3
1 <tool id="rgDifferentialCount" name="Differential_Count" version="0.20"> 1 <tool id="rgDifferentialCount" name="Differential_Count" version="0.20">
2 <description>models using BioConductor packages</description> 2 <description>models using BioConductor packages</description>
3 <requirements> 3 <requirements>
4 <requirement type="package" version="2.12">biocbasics</requirement> 4 <requirement type="package" version="2.12">biocbasics</requirement>
5 <requirement type="package" version="3.0.1">r3</requirement> 5 <requirement type="package" version="3.0.1">r3</requirement>
6 <requirement type="package" version="1.3">graphicsmagic</requirement>
7 <requirement type="package" version="9.07">ghostscript</requirement>
6 </requirements> 8 </requirements>
7 9
8 <command interpreter="python"> 10 <command interpreter="python">
9 rgToolFactory.py --script_path "$runme" --interpreter "Rscript" --tool_name "DifferentialCounts" 11 rgToolFactory.py --script_path "$runme" --interpreter "Rscript" --tool_name "DifferentialCounts"
10 --output_dir "$html_file.files_path" --output_html "$html_file" --output_tab "$outtab" --make_HTML "yes" 12 --output_dir "$html_file.files_path" --output_html "$html_file" --output_tab "$outtab" --make_HTML "yes"