Mercurial > repos > fubar > differential_count_models

comparison rgedgeRpaired_nocamera.xml @ 115:badcd3b0e708 draft

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Uploaded
author fubar
date Thu, 23 Oct 2014 01:31:34 -0400
parents 9f2e0ec3e826
children b0d21688db8e
comparison
equal deleted inserted replaced
114:616c780f69a6 115:badcd3b0e708
1 <tool id="rgDifferentialCount" name="Differential_Count" version="0.26"> 1 <tool id="rgDifferentialCount" name="Differential_Count" version="0.26">
2 <description>models using BioConductor packages</description> 2 <description>models using BioConductor packages</description>
3 <requirements> 3 <requirements>
4 <requirement type="package" version="2.14">biocbasics</requirement> 4 <requirement type="package" version="2.9.1">libxml2</requirement>
5 <requirement type="package" version="3.1.1">R_3_1_1</requirement> 5 <requirement type="package" version="3.1.1">R_3_1_1</requirement>
6 <requirement type="package" version="1.3.18">graphicsmagick</requirement> 6 <requirement type="package" version="1.3.18">graphicsmagick</requirement>
7 <requirement type="package" version="9.10">ghostscript</requirement> 7 <requirement type="package" version="9.10">ghostscript</requirement> <package name="libxml2" version="2.9.1">
8 <requirement type="package" version="2.14">biocbasics</requirement>
8 </requirements> 9 </requirements>
9 10
10 <command interpreter="python"> 11 <command interpreter="python">
11 rgToolFactory.py --script_path "$runme" --interpreter "Rscript" --tool_name "DifferentialCounts" 12 rgToolFactory.py --script_path "$runme" --interpreter "Rscript" --tool_name "DifferentialCounts"
12 --output_dir "$html_file.files_path" --output_html "$html_file" --make_HTML "yes" 13 --output_dir "$html_file.files_path" --output_html "$html_file" --make_HTML "yes"