Mercurial > repos > fubar > differential_count_models
comparison tool_dependencies.xml @ 139:5f4e2a75745f draft
Uploaded
| author | fubar |
|---|---|
| date | Wed, 07 Jan 2015 03:03:31 -0500 |
| parents | 48a6a92bbc30 |
| children | 9809bcb27cc1 |
comparison
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| 138:2542743b2861 | 139:5f4e2a75745f |
|---|---|
| 15 <actions> | 15 <actions> |
| 16 <action type="setup_r_environment"> | 16 <action type="setup_r_environment"> |
| 17 <repository changeset_revision="f0626dac6765" name="package_r_3_1_2" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu"> | 17 <repository changeset_revision="f0626dac6765" name="package_r_3_1_2" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu"> |
| 18 <package name="R" version="3.1.2" /> | 18 <package name="R" version="3.1.2" /> |
| 19 </repository> | 19 </repository> |
| 20 <package>https://github.com/fubar2/galaxy_tool_source/blob/master/RELEASE_2_14/diffcount/stringr_0.6.2.tar.gz?raw=true</package> | |
| 20 <package>https://github.com/fubar2/galaxy_tool_source/blob/master/RELEASE_2_14/diffcount/gtools_3.4.1.tar.gz?raw=true</package> | 21 <package>https://github.com/fubar2/galaxy_tool_source/blob/master/RELEASE_2_14/diffcount/gtools_3.4.1.tar.gz?raw=true</package> |
| 21 <package>https://github.com/fubar2/galaxy_tool_source/blob/master/RELEASE_2_14/diffcount/gdata_2.13.3.tar.gz?raw=true</package> | 22 <package>https://github.com/fubar2/galaxy_tool_source/blob/master/RELEASE_2_14/diffcount/gdata_2.13.3.tar.gz?raw=true</package> |
| 22 <package>https://github.com/fubar2/galaxy_tool_source/blob/master/RELEASE_2_14/diffcount/bitops_1.0-6.tar.gz?raw=true</package> | 23 <package>https://github.com/fubar2/galaxy_tool_source/blob/master/RELEASE_2_14/diffcount/bitops_1.0-6.tar.gz?raw=true</package> |
| 23 <package>https://github.com/fubar2/galaxy_tool_source/blob/master/RELEASE_2_14/diffcount/caTools_1.17.1.tar.gz?raw=true</package> | 24 <package>https://github.com/fubar2/galaxy_tool_source/blob/master/RELEASE_2_14/diffcount/caTools_1.17.1.tar.gz?raw=true</package> |
| 24 <package>https://github.com/fubar2/galaxy_tool_source/blob/master/RELEASE_2_14/diffcount/KernSmooth_2.23-13.tar.gz?raw=true</package> | 25 <package>https://github.com/fubar2/galaxy_tool_source/blob/master/RELEASE_2_14/diffcount/KernSmooth_2.23-13.tar.gz?raw=true</package> |
| 25 <package>https://github.com/fubar2/galaxy_tool_source/blob/master/RELEASE_2_14/diffcount/gplots_2.15.0.tar.gz?raw=true</package> | 26 <package>https://github.com/fubar2/galaxy_tool_source/blob/master/RELEASE_2_14/diffcount/gplots_2.15.0.tar.gz?raw=true</package> |
| 26 <package>https://github.com/fubar2/galaxy_tool_source/blob/master/RELEASE_2_14/diffcount/limma_3.22.1.tar.gz?raw=true</package> | 27 <package>https://github.com/fubar2/galaxy_tool_source/blob/master/RELEASE_2_14/diffcount/limma_3.22.1.tar.gz?raw=true</package> |
| 28 <package>https://github.com/fubar2/galaxy_tool_source/blob/master/RELEASE_2_14/diffcount/edgeR_3.8.5.tar.gz?raw=true</package> | |
| 27 <package>https://github.com/fubar2/galaxy_tool_source/blob/master/RELEASE_2_14/diffcount/BiocGenerics_0.12.1.tar.gz?raw=true</package> | 29 <package>https://github.com/fubar2/galaxy_tool_source/blob/master/RELEASE_2_14/diffcount/BiocGenerics_0.12.1.tar.gz?raw=true</package> |
| 28 <package>https://github.com/fubar2/galaxy_tool_source/blob/master/RELEASE_2_14/diffcount/S4Vectors_0.4.0.tar.gz?raw=true</package> | 30 <package>https://github.com/fubar2/galaxy_tool_source/blob/master/RELEASE_2_14/diffcount/S4Vectors_0.4.0.tar.gz?raw=true</package> |
| 29 <package>https://github.com/fubar2/galaxy_tool_source/blob/master/RELEASE_2_14/diffcount/IRanges_2.0.1.tar.gz?raw=true</package> | 31 <package>https://github.com/fubar2/galaxy_tool_source/blob/master/RELEASE_2_14/diffcount/IRanges_2.0.1.tar.gz?raw=true</package> |
| 30 <package>https://github.com/fubar2/galaxy_tool_source/blob/master/RELEASE_2_14/diffcount/GenomeInfoDb_1.2.4.tar.gz?raw=true</package> | 32 <package>https://github.com/fubar2/galaxy_tool_source/blob/master/RELEASE_2_14/diffcount/GenomeInfoDb_1.2.4.tar.gz?raw=true</package> |
| 31 <package>https://github.com/fubar2/galaxy_tool_source/blob/master/RELEASE_2_14/diffcount/XVector_0.6.0.tar.gz?raw=true</package> | 33 <package>https://github.com/fubar2/galaxy_tool_source/blob/master/RELEASE_2_14/diffcount/XVector_0.6.0.tar.gz?raw=true</package> |
| 32 <package>https://github.com/fubar2/galaxy_tool_source/blob/master/RELEASE_2_14/diffcount/GenomicRanges_1.18.3.tar.gz?raw=true</package> | 34 <package>https://github.com/fubar2/galaxy_tool_source/blob/master/RELEASE_2_14/diffcount/GenomicRanges_1.18.3.tar.gz?raw=true</package> |
| 35 <package>https://github.com/fubar2/galaxy_tool_source/blob/master/RELEASE_2_14/diffcount/Rcpp_0.11.3.tar.gz?raw=true</package> | |
| 33 <package>https://github.com/fubar2/galaxy_tool_source/blob/master/RELEASE_2_14/diffcount/RcppArmadillo_0.4.600.0.tar.gz?raw=true</package> | 36 <package>https://github.com/fubar2/galaxy_tool_source/blob/master/RELEASE_2_14/diffcount/RcppArmadillo_0.4.600.0.tar.gz?raw=true</package> |
| 34 <package>https://github.com/fubar2/galaxy_tool_source/blob/master/RELEASE_2_14/diffcount/Biobase_2.26.0.tar.gz?raw=true</package> | 37 <package>https://github.com/fubar2/galaxy_tool_source/blob/master/RELEASE_2_14/diffcount/Biobase_2.26.0.tar.gz?raw=true</package> |
| 35 <package>https://github.com/fubar2/galaxy_tool_source/blob/master/RELEASE_2_14/diffcount/codetools_0.2-9.tar.gz?raw=true</package> | 38 <package>https://github.com/fubar2/galaxy_tool_source/blob/master/RELEASE_2_14/diffcount/codetools_0.2-9.tar.gz?raw=true</package> |
| 36 <package>https://github.com/fubar2/galaxy_tool_source/blob/master/RELEASE_2_14/diffcount/iterators_1.0.7.tar.gz?raw=true</package> | 39 <package>https://github.com/fubar2/galaxy_tool_source/blob/master/RELEASE_2_14/diffcount/iterators_1.0.7.tar.gz?raw=true</package> |
| 37 <package>https://github.com/fubar2/galaxy_tool_source/blob/master/RELEASE_2_14/diffcount/foreach_1.4.2.tar.gz?raw=true</package> | 40 <package>https://github.com/fubar2/galaxy_tool_source/blob/master/RELEASE_2_14/diffcount/foreach_1.4.2.tar.gz?raw=true</package> |
| 50 <package>https://github.com/fubar2/galaxy_tool_source/blob/master/RELEASE_2_14/diffcount/XML_3.98-1.1.tar.gz?raw=true</package> | 53 <package>https://github.com/fubar2/galaxy_tool_source/blob/master/RELEASE_2_14/diffcount/XML_3.98-1.1.tar.gz?raw=true</package> |
| 51 <package>https://github.com/fubar2/galaxy_tool_source/blob/master/RELEASE_2_14/diffcount/xtable_1.7-4.tar.gz?raw=true</package> | 54 <package>https://github.com/fubar2/galaxy_tool_source/blob/master/RELEASE_2_14/diffcount/xtable_1.7-4.tar.gz?raw=true</package> |
| 52 <package>https://github.com/fubar2/galaxy_tool_source/blob/master/RELEASE_2_14/diffcount/annotate_1.44.0.tar.gz?raw=true</package> | 55 <package>https://github.com/fubar2/galaxy_tool_source/blob/master/RELEASE_2_14/diffcount/annotate_1.44.0.tar.gz?raw=true</package> |
| 53 <package>https://github.com/fubar2/galaxy_tool_source/blob/master/RELEASE_2_14/diffcount/survival_2.37-7.tar.gz?raw=true</package> | 56 <package>https://github.com/fubar2/galaxy_tool_source/blob/master/RELEASE_2_14/diffcount/survival_2.37-7.tar.gz?raw=true</package> |
| 54 <package>https://github.com/fubar2/galaxy_tool_source/blob/master/RELEASE_2_14/diffcount/genefilter_1.48.1.tar.gz?raw=true</package> | 57 <package>https://github.com/fubar2/galaxy_tool_source/blob/master/RELEASE_2_14/diffcount/genefilter_1.48.1.tar.gz?raw=true</package> |
| 58 <package>https://github.com/fubar2/galaxy_tool_source/blob/master/RELEASE_2_14/diffcount/lattice_0.20-29.tar.gz?raw=true</package> | |
| 55 <package>https://github.com/fubar2/galaxy_tool_source/blob/master/RELEASE_2_14/diffcount/latticeExtra_0.6-26.tar.gz?raw=true</package> | 59 <package>https://github.com/fubar2/galaxy_tool_source/blob/master/RELEASE_2_14/diffcount/latticeExtra_0.6-26.tar.gz?raw=true</package> |
| 56 <package>https://github.com/fubar2/galaxy_tool_source/blob/master/RELEASE_2_14/diffcount/locfit_1.5-9.1.tar.gz?raw=true</package> | 60 <package>https://github.com/fubar2/galaxy_tool_source/blob/master/RELEASE_2_14/diffcount/locfit_1.5-9.1.tar.gz?raw=true</package> |
| 57 <package>https://github.com/fubar2/galaxy_tool_source/blob/master/RELEASE_2_14/diffcount/RColorBrewer_1.1-2.tar.gz?raw=true</package> | 61 <package>https://github.com/fubar2/galaxy_tool_source/blob/master/RELEASE_2_14/diffcount/RColorBrewer_1.1-2.tar.gz?raw=true</package> |
| 58 <package>https://github.com/fubar2/galaxy_tool_source/blob/master/RELEASE_2_14/diffcount/geneplotter_1.44.0.tar.gz?raw=true</package> | 62 <package>https://github.com/fubar2/galaxy_tool_source/blob/master/RELEASE_2_14/diffcount/geneplotter_1.44.0.tar.gz?raw=true</package> |
| 59 <package>https://github.com/fubar2/galaxy_tool_source/blob/master/RELEASE_2_14/diffcount/plyr_1.8.1.tar.gz?raw=true</package> | 63 <package>https://github.com/fubar2/galaxy_tool_source/blob/master/RELEASE_2_14/diffcount/plyr_1.8.1.tar.gz?raw=true</package> |