Mercurial > repos > fubar > differential_count_models
comparison rgedgeR/rgedgeRpaired.xml @ 18:1ba6b7c6f4df draft
Uploaded
| author | fubar |
|---|---|
| date | Sat, 27 Jul 2013 20:46:47 -0400 |
| parents | b1cf0745bde5 |
| children | 79e3d80d34f9 |
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| 17:b1cf0745bde5 | 18:1ba6b7c6f4df |
|---|---|
| 692 #end if | 692 #end if |
| 693 | 693 |
| 694 if (sum(c(doedgeR,doVoom,doDESeq2)) == 0) | 694 if (sum(c(doedgeR,doVoom,doDESeq2)) == 0) |
| 695 { | 695 { |
| 696 write("No methods chosen - nothing to do! Please try again after choosing one or more methods", stderr()) | 696 write("No methods chosen - nothing to do! Please try again after choosing one or more methods", stderr()) |
| 697 quit(save="no") | 697 quit(save="no",status=2) |
| 698 } | 698 } |
| 699 | 699 |
| 700 Out_Dir = "$html_file.files_path" | 700 Out_Dir = "$html_file.files_path" |
| 701 Input = "$input1" | 701 Input = "$input1" |
| 702 TreatmentName = "$treatment_name" | 702 TreatmentName = "$treatment_name" |