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3
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1 <project name="batchcorrection" default="all">
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2
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3 <property name="tool.xml" value="batch_correction.xml"/>
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4 <property name="conda.dir" value="${user.home}/w4m-conda"/>
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5
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6 <!--~~~
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7 ~ ALL ~
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8 ~~~~~-->
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9
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10 <target name="all"/>
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11
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12 <!--~~~~
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13 ~ TEST ~
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14 ~~~~~-->
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15
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16 <target name="test" depends="planemo.lint,planemo.test"/>
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17
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18 <!--~~~~~~~~~~~~
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19 ~ PLANEMO LINT ~
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20 ~~~~~~~~~~~~~-->
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21
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22 <target name="planemo.lint">
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23 <exec executable="planemo" failonerror="true">
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24 <arg value="lint"/>
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25 <arg value="${tool.xml}"/>
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26 </exec>
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27 </target>
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28
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29 <!--~~~~~~~~~~~~
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30 ~ PLANEMO TEST ~
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31 ~~~~~~~~~~~~~-->
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32
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33 <target name="planemo.test">
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34 <exec executable="planemo" failonerror="true">
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35 <arg value="test"/>
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36 <arg value="--conda_prefix"/>
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37 <arg value="${conda.dir}"/>
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38 <arg value="--galaxy_branch"/>
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39 <arg value="release_17.05"/>
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40 <arg value="--conda_dependency_resolution"/>
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41 <arg value="${tool.xml}"/>
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42 </exec>
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43 </target>
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44
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45 <!--~~~~~~~~~~~~~~~~~~~~~
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46 ~ PLANEMO CONDA INSTALL ~
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47 ~~~~~~~~~~~~~~~~~~~~~~-->
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48
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49 <target name="planemo.conda.install" depends="planemo.conda.init">
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50 <exec executable="planemo" failonerror="true">
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51 <arg value="conda_install"/>
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52 <arg value="--conda_prefix"/>
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53 <arg value="${conda.dir}"/>
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54 <arg value="${tool.xml}"/>
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55 </exec>
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56 </target>
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57
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58 <!--~~~~~~~~~~~~~~~~~~
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59 ~ PLANEMO CONDA INIT ~
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60 ~~~~~~~~~~~~~~~~~~~-->
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61
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62 <target name="planemo.conda.init">
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63 <exec executable="planemo" failonerror="true">
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64 <arg value="conda_init"/>
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65 <arg value="--conda_prefix"/>
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66 <arg value="${conda.dir}"/>
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67 </exec>
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68 </target>
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69
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70 <!--~~~~~
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71 ~ CLEAN ~
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72 ~~~~~~-->
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73
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74 <target name="clean">
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75 <delete dir="${conda.dir}"/>
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76 </target>
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77
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78 </project>
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