# HG changeset patch
# User estrain
# Date 1559005118 14400
# Node ID b9876bb19cac4972b065ed77161def7e293b1341
# Parent  2bd184a17d85e58de5a976948b5afb2971f88637
Uploaded

diff -r 2bd184a17d85 -r b9876bb19cac srst2v2.xml
--- a/srst2v2.xml	Mon May 27 20:29:28 2019 -0400
+++ b/srst2v2.xml	Mon May 27 20:58:38 2019 -0400
@@ -99,7 +99,7 @@
           --other "'-p \${GALAXY_SLOTS:-1}'"
       #end if
 
-      ; cat *results.txt | sed /sample/${fname}/ > results.txt
+      ; cat *results.txt | sed s/sample/${fname}/ > results.txt
 
       #if $job_type.job == "mlst" 
         ; python $__tool_directory__/scoreProfiles.py --mlst_definitions $job_type.mlst_definitions --profile_cov $job_type.profile_cov --profile_max_mismatch $job_type.profile_max_mismatch --output srst2.pscores