annotate SeqSero/database/FljB_Family_z_special_genes.fasta @ 6:50145485b944 draft default tip

Uploaded
author estrain
date Wed, 06 Dec 2017 15:33:50 -0500
parents b0e627ec0dda
children
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
0
b0e627ec0dda Uploaded
estrain
parents:
diff changeset
1 >fljB_z_Salmonella.enterica_IIIb.53:z:1,5,(7)_AY353338
b0e627ec0dda Uploaded
estrain
parents:
diff changeset
2 GATAGCAAAGCTGTGACTGGTGTTTCTACTTTGGATACTACAGGTCTTACTGGTACAGCTATTAAAACTGGCGTTGCTGGAGCTACCACTACAACTGGTTCCATTAAAGATGACAAAGTATATTATGATAGTGCTACTAAAAATTATTATGCTGAAGTGAACTTTACAGATGCCGCTGATACCGCTAAAAATGGTTTCTATAAAGTCAATGTTGCTGATGATGGCACTGTTACAATGGGGGCTTCGACTACTAAAGAAGCTGCGAAACCTGCAGGTGTTGTTGAAGTAACGAAAACCCAAGAAGAGAAAGCAATTAAGGCATCTGCAGATGTGAAAGCTGCTCTGACTGCTGGAGGTATTGATACTGCTGATGCAGCTACGGCAGAAATG
b0e627ec0dda Uploaded
estrain
parents:
diff changeset
3 >fljB_z_Salmonella.enterica_IIIb.48:z:1,5,(7)_AY353339
b0e627ec0dda Uploaded
estrain
parents:
diff changeset
4 GATAGCAAAGCTGTGACTGGTGTTTCTACTTTGGATACTACAGGTCTTACTGGTACAGCTATTAAAACTGGCGTTGCTGGAGCTACCACTACAACTGGTTCCATTAAAGATGACAAAGTATATTATGATAGTGCTACTAAAAATTATTATGCTGAAGTGAACTTTACAGATGCCGCTGATACCGCTAAAAATGGTTTCTATAAAGTCAATGTTGCTGATGATGGCACTGTTACAATGGGGGCTTCGACTACTAAAGAAGCTGCGAAACCTGCAGGTGTTGTTGAAGTAACGAAAACCCAAGAAGAGAAAGCAATTAAGGCATCTGCAGATGTGAAAGCTGCTCTGACTGCTGGAGGTATTGATACTGCTGATGCAGCTACGGCAGAAATG
b0e627ec0dda Uploaded
estrain
parents:
diff changeset
5 >fljB_z_Salmonella.enterica_IIIb.50:k:z_AY353337
b0e627ec0dda Uploaded
estrain
parents:
diff changeset
6 GATAGCAAAGCTGTAACTGGTGTTTCTACTTTGGATACTACAGGTCTTACTGGTACAGCTATTAAAACTGGCGTTGCTGGAGCTACCACTACAACTGGTTCCATTAAAGATGACAAAGTATATTATGATAGTGCTACTAAAAATTATTATGCTGAAGTGAACTTTACAGATGCCGCTGATACCGCTAAAAATGGTTTCTATAAAGTCAATGTTGCTGATGATGGCACTGTTACAATGGGGGCTTCGACTACTAAAGAAGCTGCGAAACCTGCAGGTGTTGTTGAAGTAACGAAAACCCAAGAAGAGAAAGCAATTAAGGCATCTGCAGATGTGAAAGCTGCTCTGACTGCTGGAGGTATTGATACTGCTGATGCAGCTACGGCAGAAATG
b0e627ec0dda Uploaded
estrain
parents:
diff changeset
7 >fljB_z_Salmonella.enterica_IIIb.48:i:z_AY353336
b0e627ec0dda Uploaded
estrain
parents:
diff changeset
8 GATAGCAAAGCTGTAACTGGTGTTTCTACTTTGGATACTACAGGTCTTACTGGTACAGCTATTAAAACTGGCGTTGCTGGAGCTACCACTACAACTGGTTCCATTAAAGATGACAAAGTATATTATGATAGTGCTACTAAAAATTATTATGCTGAAGTGAACTTTACAGATGCCGCTGATACCGCTAAAAATGGTTTCTATAAAGTCAATGTTGCTGATGATGGCACTGTTACAATGGGGGCTTCGACTACTAAAGAAGCTGCGAAACCTGCAGGTGTTGTTGAAGTAACGAAAACCCAAGAAGAGAAAGCAATTAAGGCATCCGCAGATGTGAAAGCTGCTCTGACTGCTGGAGGTATTGATACTGCTGATGCAGCTACGGCAGAAATG
b0e627ec0dda Uploaded
estrain
parents:
diff changeset
9 >fljB_z_Salmonella.enterica_IIIb.61:i:z_AY353335
b0e627ec0dda Uploaded
estrain
parents:
diff changeset
10 GATAGCAAAGCTGTAACTGGTGTTTCTACTTTGGATACTACAGGTCTTACTGGTACAGCTATTAAAACTGGCGTTGCTGGAGCTACCACTACAACTGGTTCCATTAAAGATGACAAAGTATATTATGATAGTGCTACTAAAAATTATTATGCTGAAGTGAACTTTACAGATGCCGCTGATACCGCTAAAAATGGTTTCTATAAAGTCAATGTTGCTGATGATGGCACTGTTACAATGGGGGCTTCGACTACTAAAGAAGCTGCGAAACCTGCAGGTGTTGTTGAAGTAACGAAAACCCAAGAAGAGAAAGCAATTAAGGCATCCGCAGATGTGAAAGCTGCTCTGACTGCTGGAGGTATTGATACTGCTGATGCAGCTACGGCAGAAATG
b0e627ec0dda Uploaded
estrain
parents:
diff changeset
11 >fljB_z6_Kentuckystr_AOYY01000105
b0e627ec0dda Uploaded
estrain
parents:
diff changeset
12 GATAGTAAGGCTGTGACAGTAGCTGCCAATTTAGATATTACTGATCTTAATAAAGACGCAGCCCTTAAAGCAGGCACTGGTGCTACAACAGGTACTGCAGCAATAAAAGATGGCAAAGTTTATTATGATAGTGCTAGCAAAAACTACTATGTTGAAGTTACCGGTCTGACCACCCCTGATGACGGTAAAAATGGCTTCTATAAAGTAAATGTCGCCGATGATGGTAAGGTGTCTATGACCGCTGGTACGGCTATGGAGGCGGGTAAACCAGCTGGTGCGGTAGAAGTAACAAAAACTCAGGAAGAAAAAAATCCATTACCATTATCAACAGATCTCAAAACCTCCCTTAAATCTGGCGGGATTACAGACCCAGAAATTGCTGCTGCCCAGGTT
b0e627ec0dda Uploaded
estrain
parents:
diff changeset
13 >fljB_z6_Weltevredenstr_ABFF01000037
b0e627ec0dda Uploaded
estrain
parents:
diff changeset
14 GATAGTAAGGCTGTGACAGTAGCTGCCAATTTAGATATTACTGATCTTAATAAAGACGCAGCCCTTAAAGCAGGCACTGGTGCTACAACAGGTACTGCAGCAATAAAAGATGGCAAAGTTTATTATGATAGTGCTAGCAAAAACTACTATGTTGAAGTTACCGGTCTGACCACCCCTGATGACGGTAAAAATGGCTTCTATAAAGTAAATGTCGCCGATGATGGTAAGGTGTCTATGACCGCTGGTACGGCTATGGAGGCGGGTAAACCAGCTGGTGCGGTAGAAGTAACAAAAACTCAGGAAGAAAAAAATCCATTACCATTATCAACAGATCTCAAAACCTCCCTTAAATCTGGCGGGATTACAGACCCAGAAATTGCTGCTGCCCAGGTT
b0e627ec0dda Uploaded
estrain
parents:
diff changeset
15 >fljB_z6_Sloterdijkstr_AOXT01000012
b0e627ec0dda Uploaded
estrain
parents:
diff changeset
16 GATAGTAAGGCTGTGACAGTAGCTGCCAATTTAGATATTACTGATCTTAATAAAGACGCAGCCCTTAAAGCAGGCACTGGTGCTACAACAGGTACTGCAGCAATAAAAGATGGCAAAGTTTATTATGATAGTGCTAGCAAAAACTACTATGTTGAAGTTACCGGTCTGACCACCCCTGATGACGGTAAAAATGGCTTCTATAAAGTAAATGTCGCCGATGATGGTAAGGTGTCTATGACCGCTGGTACGGCTATGGAGGCGGGTAAACCAGCTGGTGCGGTAGAAGTAACAAAAACTCAGGAAGAAAAAAATCCATTACCATTATCAACAGATCTCAAAACCTCCCTTAAATCTGGCGGGATTACAGACCCAGAAATTGCTGCTGCCCAGGTT
b0e627ec0dda Uploaded
estrain
parents:
diff changeset
17 >fljB_z6_Kentuckystr_AUQI01000001
b0e627ec0dda Uploaded
estrain
parents:
diff changeset
18 GATAGTAAGGCTGTGACAGTAGCTGCCAATTTAGATATTACTGATCTTAATAAAGACGCAGCCCTTAAAGCAGGCACTGGTGCTACAACAGGTACTGCAGCAATAAAAGATGGCAAAGTTTATTATGATAGTGCTAGCAAAAACTACTATGTTGAAGTTACCGGTCTGACCACCCCTGATGACGGTAAAAATGGCTTCTATAAAGTAAATGTCGCCGATGATGGTAAGGTGTCTATGACCGCTGGTACGGCTATGGAGGCGGGTAAACCAGCTGGTGCGGTAGAAGTAACAAAAACTCAGGAAGAAAAAAATCCATTACCATTATCAACAGATCTCAAAACCTCCCTTAAATCTGGCGGGATTACAGACCCAGAAATTGCTGCTGCCCAGGTT
b0e627ec0dda Uploaded
estrain
parents:
diff changeset
19 >fljB_z6_Kentuckystr_ABAK02000001
b0e627ec0dda Uploaded
estrain
parents:
diff changeset
20 GATAGTAAGGCTGTGACAGTAGCTGCCAATTTAGATATTACTGATCTTAATAAAGACGCAGCCCTTAAAGCAGGCACTGGTGCTACAACAGGTACTGCAGCAATAAAAGATGGCAAAGTTTATTATGATAGTGCTAGCAAAAACTACTATGTTGAAGTTACCGGTCTGACCACCCCTGATGACGGTAAAAATGGCTTCTATAAAGTAAATGTCGCCGATGATGGTAAGGTGTCTATGACCGCTGGTACGGCTATGGAGGCGGGTAAACCAGCTGGTGCGGTAGAAGTAACAAAAACTCAGGAAGAAAAAAATCCATTACCATTATCAACAGATCTCAAAACCTCCCTTAAATCTGGCGGGATTACAGACCCAGAAATTGCTGCTGCCCAGGTT
b0e627ec0dda Uploaded
estrain
parents:
diff changeset
21 >fljB_z6_Kentuckystr_AOYZ01000091
b0e627ec0dda Uploaded
estrain
parents:
diff changeset
22 GATAGTAAGGCTGTGACAGTAGCTGCCAATTTAGATATTACTGATCTTAATAAAGACGCAGCCCTTAAAGCAGGCACTGGTGCTACAACAGGTACTGCAGCAATAAAAGATGGCAAAGTTTATTATGATAGTGCTAGCAAAAACTACTATGTTGAAGTTACCGGTCTGACCACCCCTGATGACGGTAAAAATGGCTTCTATAAAGTAAATGTCGCCGATGATGGTAAGGTGTCTATGACCGCTGGTACGGCTATGGAGGCGGGTAAACCAGCTGGTGCGGTAGAAGTAACAAAAACTCAGGAAGAAAAAAATCCATTACCATTATCAACAGATCTCAAAACCTCCCTTAAATCTGGCGGGATTACAGACCCAGAAATTGCTGCTGCCCAGGTT
b0e627ec0dda Uploaded
estrain
parents:
diff changeset
23 >fljB_z6_Kentuckystr_AHUU01000123
b0e627ec0dda Uploaded
estrain
parents:
diff changeset
24 GATAGTAAGGCTGTGACAGTAGCTGCCAATTTAGATATTACTGATCTTAATAAAGACGCAGCCCTTAAAGCAGGCACTGGTGCTACAACAGGTACTGCAGCAATAAAAGATGGCAAAGTTTATTATGATAGTGCTAGCAAAAACTACTATGTTGAAGTTACCGGTCTGACCACCCCTGATGACGGTAAAAATGGCTTCTATAAAGTAAATGTCGCCGATGATGGTAAGGTGTCTATGACCGCTGGTACGGCTATGGAGGCGGGTAAACCAGCTGGTGCGGTAGAAGTAACAAAAACTCAGGAAGAAAAAAATCCATTACCATTATCAACAGATCTCAAAACCTCCCTTAAATCTGGCGGGATTACAGACCCAGAAATTGCTGCTGCCCAGGTT
b0e627ec0dda Uploaded
estrain
parents:
diff changeset
25 >fljB_z6_Kentuckystr_AUQH01000001
b0e627ec0dda Uploaded
estrain
parents:
diff changeset
26 GATAGTAAGGCTGTGACAGTAGCTGCCAATTTAGATATTACTGATCTTAATAAAGACGCAGCCCTTAAAGCAGGCACTGGTGCTACAACAGGTACTGCAGCAATAAAAGATGGCAAAGTTTATTATGATAGTGCTAGCAAAAACTACTATGTTGAAGTTACCGGTCTGACCACCCCTGATGACGGTAAAAATGGCTTCTATAAAGTAAATGTCGCCGATGATGGTAAGGTGTCTATGACCGCTGGTACGGCTATGGAGGCGGGTAAACCAGCTGGTGCGGTAGAAGTAACAAAAACTCAGGAAGAAAAAAATCCATTACCATTATCAACAGATCTCAAAACCTCCCTTAAATCTGGCGGGATTACAGACCCAGAAATTGCTGCTGCCCAGGTT
b0e627ec0dda Uploaded
estrain
parents:
diff changeset
27 >fljB_z6_Kentuckystr_AUQJ01000001
b0e627ec0dda Uploaded
estrain
parents:
diff changeset
28 GATAGTAAGGCTGTGACAGTAGCTGCCAATTTAGATATTACTGATCTTAATAAAGACGCAGCCCTTAAAGCAGGCACTGGTGCTACAACAGGTACTGCAGCAATAAAAGATGGCAAAGTTTATTATGATAGTGCTAGCAAAAACTACTATGTTGAAGTTACCGGTCTGACCACCCCTGATGACGGTAAAAATGGCTTCTATAAAGTAAATGTCGCCGATGATGGTAAGGTGTCTATGACCGCTGGTACGGCTATGGAGGCGGGTAAACCAGCTGGTGCGGTAGAAGTAACAAAAACTCAGGAAGAAAAAAATCCATTACCATTATCAACAGATCTCAAAACCTCCCTTAAATCTGGCGGGATTACAGACCCAGAAATTGCTGCTGCCCAGGTT
b0e627ec0dda Uploaded
estrain
parents:
diff changeset
29 >fljB_z6_Kentuckystr_AUQF01000002
b0e627ec0dda Uploaded
estrain
parents:
diff changeset
30 GATAGTAAGGCTGTGACAGTAGCTGCCAATTTAGATATTACTGATCTTAATAAAGACGCAGCCCTTAAAGCAGGCACTGGTGCTACAACAGGTACTGCAGCAATAAAAGATGGCAAAGTTTATTATGATAGTGCTAGCAAAAACTACTATGTTGAAGTTACCGGTCTGACCACCCCTGATGACGGTAAAAATGGCTTCTATAAAGTAAATGTCGCCGATGATGGTAAGGTGTCTATGACCGCTGGTACGGCTATGGAGGCGGGTAAACCAGCTGGTGCGGTAGAAGTAACAAAAACTCAGGAAGAAAAAAATCCATTACCATTATCAACAGATCTCAAAACCTCCCTTAAATCTGGCGGGATTACAGACCCAGAAATTGCTGCTGCCCAGGTT
b0e627ec0dda Uploaded
estrain
parents:
diff changeset
31 >fljB_z6_Kentuckystr_AYDR01000034
b0e627ec0dda Uploaded
estrain
parents:
diff changeset
32 GATAGTAAGGCTGTGACAGTAGCTGCCAATTTAGATATTACTGATCTTAATAAAGACGCAGCCCTTAAAGCAGGCACTGGTGCTACAACAGGTACTGCAGCAATAAAAGATGGCAAAGTTTATTATGATAGTGCTAGCAAAAACTACTATGTTGAAGTTACCGGTCTGACCACCCCTGATGACGGTAAAAATGGCTTCTATAAAGTAAATGTCGCCGATGATGGTAAGGTGTCTATGACCGCTGGTACGGCTATGGAGGCGGGTAAACCAGCTGGTGCGGTAGAAGTAACAAAAACTCAGGAAGAAAAAAATCCATTACCATTATCAACAGATCTCAAAACCTCCCTTAAATCTGGCGGGATTACAGACCCAGAAATTGCTGCTGCCCAGGTT
b0e627ec0dda Uploaded
estrain
parents:
diff changeset
33 >fljB_z6_Salmonella.enterica_Weltevreden_AY353353
b0e627ec0dda Uploaded
estrain
parents:
diff changeset
34 GATAGTAAGGCTGTGACAGTAGCTGCCAATTTAGATATTACTGATCTTAATAAAGACGCAGCCCTTAAAGCAGGCACTGGTGCTACAACAGGTACTGCAGCAATAAAAGATGGCAAAGTTTATTATGATAGTGCTAGCAAAAACTACTATGTTGAAGTTACCGGTCTGACCACCCCTGATGACGGTAAAAATGGCTTCTATAAAGTAAATGTCGCCGATGATGGTAAGGTGTCTATGACCGCTGGTACGGCTATGGAGGCGGGTAAACCAGCTGGTGCGGTAGAAGTAACAAAAACTCAGGAAGAAAAAAATCCATTACCATTATCAACAGATCTCAAAACCTCCCTTAAATCTGGCGGGATTACAGACCCAGAAATTGCTGCTGCCCAGGTT
b0e627ec0dda Uploaded
estrain
parents:
diff changeset
35 >fljB_z6_Salmonella.enterica_Bere_AY353352
b0e627ec0dda Uploaded
estrain
parents:
diff changeset
36 GATAGTAAGGCTGTGACAGTAGCTGCCAATTTAGATATTACTGATCTTAATAAAGACGCAGCCCTTAAAGCAGGCACTGGTGCTACAACAGGTACTGCAGCAATAAAAGATGGCAAAGTTTATTATGATAGTGCTAGCAAAAACTACTATGTTGAAGTTACCGGTCTGACCACCCCTGATGACGGTAAAAATGGCTTCTATAAAGTAAATGTCGCCGATGATGGTAAGGTGTCTATGACCGCTGGTACGGCTATGGAGGCGGGTAAACCAGCTGGTGCGGTAGAAGTAACAAAAACTCAGGAAGAAAAAAATCCATTACCATTATCAACAGATCTCAAAACCTCCCTTAAATCTGGCGGGATTACAGACCCAGAAATTGCTGCTGCCCAGGTT