# HG changeset patch
# User estrain
# Date 1670772245 0
# Node ID 93b07a10d0c0542d43a9f128dae07d7c89c60ebb
# Parent  b14b36b40defcc0d40c412fa951f990da8900671
Uploaded

diff -r b14b36b40def -r 93b07a10d0c0 lissero.xml
--- a/lissero.xml	Sun Nov 20 17:09:54 2022 +0000
+++ b/lissero.xml	Sun Dec 11 15:24:05 2022 +0000
@@ -41,24 +41,11 @@
 
 Options:
   -h, --help              Show this message and exit.
-  -s, --serotype_db TEXT  [default:
-                          /home/user/miniconda3/lib/python3.9/site-
-                          packages/lissero/db]
   --min_id FLOAT          Minimum percent identity to accept a match. [0-100][default=95.0]
   --min_cov FLOAT         Minimum coverage of the gene to accept a match. [0-100][default=95.0]
-  --logfile TEXT          Save log to a file instead of printing to stderr
-  --version               Show Version Information
 
     ]]></help>
     <citations>
-        <citation type="bibtex">
-@misc{githublissero,
-  author = {LastTODO, FirstTODO},
-  year = {TODO},
-  title = {lissero},
-  publisher = {GitHub},
-  journal = {GitHub repository},
-  url = {https://github.com/MDU-PHL/lissero},
-}</citation>
+      <citation type="doi">10.1128/JCM.42.8.3819-3822.2004</citation> 
     </citations>
 </tool>