Mercurial > repos > estrain > data_manager_amrfinderplus

changeset 9:949480e9f6a3 draft

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Uploaded
author estrain
date Sun, 22 May 2022 18:42:55 +0000
parents 2ec5dcc42c63
children f4ebbfede5a4
files data_manager_amrfinderplus/data_manager/data_manager_amrfinderplus.xml
diffstat 1 files changed, 1 insertions(+), 3 deletions(-) [+]
line wrap: on
line diff
--- a/data_manager_amrfinderplus/data_manager/data_manager_amrfinderplus.xml	Sun May 22 18:42:43 2022 +0000
+++ b/data_manager_amrfinderplus/data_manager/data_manager_amrfinderplus.xml	Sun May 22 18:42:55 2022 +0000
@@ -5,12 +5,10 @@
         <requirement type="package">hmmer</requirement>
     </requirements>
     <command detect_errors="exit_code"><![CDATA[
-        python $__tool_directory__/data_manager_amrfinderplus.py --name $amrdbname --value $amrdbvalue --key $amrdbkey --out ${out_file};
+        python $__tool_directory__/data_manager_amrfinderplus.py --name $amrdbname --key $amrdbkey --out ${out_file};
     ]]></command>
     <inputs>
-      <param name="amrdbkey" type="text" label="Unique Database Key"/>
       <param name="amrdbname" type="text" label="Name of amrFinderPlus database"/>
-      <param name="amrdbvalue" type="text" label="Value of amrFinderPlus database"/>
     </inputs>
     <outputs>
         <data name="out_file" format="data_manager_json" dbkey="amrdbkey"/>