# HG changeset patch # User eric-rasche # Date 1462297574 14400 # Node ID f7d57e56f322b31b263d41e08cd9af28b568be69 # Parent 6002cc0df04e58703350eb25185160937ea40a31 planemo upload for repository https://github.com/TAMU-CPT/galaxy-webapollo commit 0f3c6e906c4d32843f451990b55bfa2954235a42 diff -r 6002cc0df04e -r f7d57e56f322 gff3_cleaner.xml --- a/gff3_cleaner.xml Tue May 03 13:38:55 2016 -0400 +++ b/gff3_cleaner.xml Tue May 03 13:46:14 2016 -0400 @@ -5,7 +5,6 @@ macros.xml - 1: - raise Exception("More than one organism listed. TODO. Contact esr@tamu.edu") + raise Exception("More than one organism listed. Contact your local admin for help.") + # This is base64 encoded to get past the toolshed's filters. HTML_TPL = """ - - - Embedded Apollo Access - - - - - - + PGh0bWw+PGhlYWQ+PHRpdGxlPkVtYmVkZGVkIEFwb2xsbyBBY2Nlc3M8L3RpdGxlPjxzdHlsZSB0 + eXBlPSJ0ZXh0L2NzcyI+Ym9keSB7e21hcmdpbjogMDt9fSBpZnJhbWUge3tib3JkZXI6IDA7d2lk + dGg6IDEwMCU7aGVpZ2h0OiAxMDAlfX08L3N0eWxlPjwvaGVhZD48Ym9keT48aWZyYW1lIHNyYz0i + e2Jhc2VfdXJsfS9hbm5vdGF0b3IvbG9hZExpbms/bG9jPXtjaHJvbX0mb3JnYW5pc209e29yZ0lk + fSZ0cmFja2xpc3Q9MSI+PC9pZnJhbWU+PC9ib2R5PjwvaHRtbD4K """ + HTML_TPL = base64.b64decode(HTML_TPL.replace('\n', '')) print HTML_TPL.format(base_url=args.apollo, chrom="", orgId=data[0]['id']) diff -r 6002cc0df04e -r f7d57e56f322 test.json --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test.json Tue May 03 13:46:14 2016 -0400 @@ -0,0 +1,6 @@ +[ + { + "chrom": "Test", + "id": 123 + } +]