diff find_organism.py @ 0:6002cc0df04e draft

planemo upload for repository https://github.com/TAMU-CPT/galaxy-webapollo commit 4e5a5af7689f1713c34a6ad9a9594c205e762fdd

--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/find_organism.py	Tue May 03 13:38:55 2016 -0400
@@ -0,0 +1,21 @@
+#!/usr/bin/env python
+import json
+import argparse
+from webapollo import WebApolloInstance
+
+if __name__ == '__main__':
+    parser = argparse.ArgumentParser(description='Sample script to add an attribute to a feature via web services')
+    parser.add_argument('apollo', help='Complete Apollo URL')
+    parser.add_argument('username', help='WA Admin Username')
+    parser.add_argument('password', help='WA Admin Password')
+
+    parser.add_argument('--commonName', help='Common Name')
+
+    args = parser.parse_args()
+
+    wa = WebApolloInstance(args.apollo, args.username, args.password)
+    data = wa.organisms.findAllOrganisms()
+    if args.commonName is not None:
+        data = [o for o in data if o['commonName'] == args.commonName]
+
+    print json.dumps(data, indent=2)