Mercurial > repos > elixir-it > vinyl_annovar

--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/VINYL_annovar.xml	Tue Jun 09 16:21:34 2020 +0000
@@ -0,0 +1,155 @@
+<tool id="AnnovarVINYL" name="AnnovarVINYL" version="1">
+  <description> annovar, annotates variants using specified gene annotations, regions, and filtering databases</description>
+  <requirements>
+    <requirement type="package" >perl</requirement>
+  </requirements>
+  <command> <![CDATA[
+       ### call the .sh to untar the package
+	sh $__tool_directory__/mv_untar_annovar.sh &&
+
+	 ## Variant annotation; make sure to include entry in indexes table for build database.
+
+          #set protocol = []
+          #set operation = []
+
+          ## Add gene annotations.
+          #if $gene_anns:
+              #silent protocol.append( str( $gene_anns )  )
+              #silent operation.append( ','.join( ['g' for t in range( str($gene_anns).count(',') + 1 )] ) )
+          #end if
+
+          ## Add filters.
+          #if $filters:
+              #silent protocol.append( str( $filters ) )
+              #silent operation.append( ','.join( ['f' for t in range( str($filters).count(',') + 1 )] ) )
+          #end if
+
+####eQTL
+	   #if $eqtl:
+              #silent protocol.append( str( $eqtl ) )
+              #silent operation.append( ','.join( ['f' for t in range( str($eqtl).count(',') + 1 )] ) )
+          #end if
+
+          #if $custom:
+              #silent protocol.append( str( $custom ) )
+              #silent operation.append( ','.join( ['r' for t in range( str($custom).count(',') + 1 )] ) )
+          #end if
+
+
+
+          #set protocol = ','.join( $protocol )
+          #set operation = ','.join( $operation )
+
+          ## Annotate variants.
+          perl \$CONDA_PREFIX/annovar/table_annovar.pl  $input1 $location_db.fields.path --buildver $assembly --remove --out annovarAnnotation --protocol $protocol --operation $operation --nastring $NA --vcfinput 2>$log
+    ]]>
+  </command>
+  <inputs>
+    <param name="assembly" type="select" label="Genome_assembly" multiple="no">
+      <option value="hg18" >hg18</option>
+      <option value="hg19" selected="true">hg19</option>
+      <option value="hg38" >hg38</option>
+    </param>
+    <param name="NA" type="text" value="." label="substitute NA with:"/>
+    <param format="vcf" name="input1" type="data" label="VCF" help="vcf input file"/>
+    <param name="gene_anns" type="select" multiple="yes" optional="true">
+      <options from_data_table="annovar">
+        <filter type="param_value" ref="assembly" column="2" />
+	<filter type="static_value" name="type" value="gene_ann" column="1"/>
+	<filter type="sort_by" column="0"/>
+      </options>
+    </param>
+    <param name="filters" type="select" multiple="yes" optional="true">
+      <options from_data_table="annovar">
+        <filter type="param_value" ref="assembly" column="2" />
+	<filter type="static_value" name="type" value="filter" column="1"/>
+        <filter type="sort_by" column="0"/>
+      </options>
+    </param>
+    <param name="eqtl" type="select" multiple="yes" optional="true">
+      <options from_data_table="annovar">
+        <filter type="param_value" ref="assembly" column="2" />
+	<filter type="static_value" name="type" value="eqtl" column="1"/>
+        <filter type="sort_by" column="0"/>
+      </options>
+     </param>
+    <param name="custom" type="select" multiple="yes" optional="true">
+      <options from_data_table="annovar">
+        <filter type="param_value" ref="assembly" column="2" />
+	<filter type="static_value" name="type" value="custom" column="1"/>
+        <filter type="sort_by" column="0"/>
+      </options>
+    </param>
+    <param name="location_db" type="select" display="radio">
+      <options from_data_table="annovar">
+        <filter type="static_value" name="type" value="location" column="1"/>
+        <filter type="sort_by" column="0"/>
+      </options>
+    </param>
+  </inputs>
+  <outputs>
+    <data format="vcf" name="output" from_work_dir="annovarAnnotation.????_multianno.vcf" label="${tool.name} on ${on_string} vcf file "/>
+    <data format="txt" name="output2" from_work_dir="annovarAnnotation.????_multianno.txt" label="${tool.name} on ${on_string} table file"/>
+    <data format="txt" name="log" label="${tool.name} on ${on_string} log file"/>
+  </outputs>
+  <stdio>
+    <regex match=".*" source="both" level="log" description="tool progress"/>
+  </stdio>
+  <tests>
+    <test>
+      <param name="assembly" value="hg19" type="select" label="Genome_assembly" multiple="no" />
+      <param name="NA" type="text" value="." label="substitute NA with:"/>
+      <param name="input1" value="Galaxy2-[Sorrentino_etal2017.vcf].vcf" ftype="vcf" type="data" label="VCF" help="vcf input file"/>
+      <param name="gene_anns" value="hg19" type="select" multiple="yes" optional="true">
+        <options from_data_table="annovar">
+          <filter type="param_value" ref="assembly" column="2" />
+          <filter type="static_value" name="type" value="gene_ann" column="1"/>
+          <filter type="sort_by" column="0"/>
+        </options>
+      </param>
+      <param name="filters" type="select" multiple="yes" optional="true">
+        <options from_data_table="annovar">
+          <filter type="param_value" ref="assembly" column="2" />
+          <filter type="static_value" name="type" value="filter" column="1"/>
+          <filter type="sort_by" column="0"/>
+        </options>
+      </param>
+      <param name="eqtl" value="hg19" type="select" multiple="yes" optional="true">
+        <options from_data_table="annovar">
+          <filter type="param_value" ref="assembly" column="2" />
+          <filter type="static_value" name="type" value="eqtl" column="1"/>
+          <filter type="sort_by" column="0"/>
+       </options>
+     </param>
+     <param name="custom" type="select" multiple="yes" optional="true">
+       <options from_data_table="annovar">
+         <filter type="param_value" ref="assembly" column="2" />
+         <filter type="static_value" name="type" value="custom" column="1"/>
+         <filter type="sort_by" column="0"/>
+       </options>
+     </param>
+     <param name="location_db.fields.path" value="/cvmfs/elixir-italy.covacs.refdata/annovardb/humandb_vinyl" type="select" display="radio"/>
+     <output name="output" file="annovarAnnotatio.vcf" ftype="vcf" />
+     <output name="output2" file="annovarAnnotation.txt" ftype="txt" />
+   </test>
+  </tests>
+  <help>
+**What it does**
+
+This tool will annotate variants using specified gene annotations, regions, and filtering databases. Input is a VCF dataset, and output is a table of annotations for each variant in the
+VCF dataset or a VCF dataset with the annotations in INFO fields.
+
+
+**Important Usage Note**
+
+ANNOVAR is open-source and free for non-profit use. If you use it for commercial purposes, please contact BIOBASE (info@biobase-international.com) directly for license related issues. Also see http://www.openbioinformatics.org/annovar/annovar_faq.html#license
+
+**IMPORTANT** to get the wrapper ready to start the admin user have to download annovar."version".tar.gz and then move it in the conda_prefix folder, the path of the conda_prefix is written in the galaxy.ini(or .yml) file
+
+
+  </help>
+  <citations>
+	<citation type="doi">10.1093/nar/gkq603</citation>
+        <citation type="doi">10.1186/s12864-018-4508-1</citation>
+  </citations>
+</tool>
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/mv_untar_annovar.sh	Tue Jun 09 16:21:34 2020 +0000
@@ -0,0 +1,11 @@
+#!/bin/bash
+# if the symbolic link is not present in the annovar conda virtual environment the script search for the tar.gz in the conda_prefix,
+# untar the archive and make a symbolic link to the $CONDA_PREFIX of the conda virtual environment
+if [[ ! -d $CONDA_PREFIX/annovar ]] ; then
+	tar -zxvf $CONDA_PREFIX/../../annovar.*.tar.gz -C $CONDA_PREFIX/../../ &&
+	echo start untar &&
+	ln -s $CONDA_PREFIX/../../annovar $CONDA_PREFIX &&
+	echo all done
+else
+	echo annovar was present
+fi
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/Galaxy2-[Sorrentino_etal2017.vcf].vcf	Tue Jun 09 16:21:34 2020 +0000
@@ -0,0 +1,1335 @@
+##fileformat=VCFv4.2
+##contig=<ID=chrM,length=16571>
+##contig=<ID=chr1,length=249250621>
+##contig=<ID=chr2,length=243199373>
+##contig=<ID=chr3,length=198022430>
+##contig=<ID=chr4,length=191154276>
+##contig=<ID=chr5,length=180915260>
+##contig=<ID=chr6,length=171115067>
+##contig=<ID=chr7,length=159138663>
+##contig=<ID=chr8,length=146364022>
+##contig=<ID=chr9,length=141213431>
+##contig=<ID=chr10,length=135534747>
+##contig=<ID=chr11,length=135006516>
+##contig=<ID=chr12,length=133851895>
+##contig=<ID=chr13,length=115169878>
+##contig=<ID=chr14,length=107349540>
+##contig=<ID=chr15,length=102531392>
+##contig=<ID=chr16,length=90354753>
+##contig=<ID=chr17,length=81195210>
+##contig=<ID=chr18,length=78077248>
+##contig=<ID=chr19,length=59128983>
+##contig=<ID=chr20,length=63025520>
+##contig=<ID=chr21,length=48129895>
+##contig=<ID=chr22,length=51304566>
+##contig=<ID=chrX,length=155270560>
+##contig=<ID=chrY,length=59373566>
+##INFO=<ID=MIN_DP,Number=1,Type=Integer,Description="Minimum depth in gVCF output block.">
+##INFO=<ID=END,Number=1,Type=Integer,Description="Last position (inclusive) in gVCF output record.">
+##INFO=<ID=NS,Number=1,Type=Integer,Description="Number of samples with data">
+##INFO=<ID=DP,Number=1,Type=Integer,Description="Total read depth at the locus">
+##INFO=<ID=DPB,Number=1,Type=Float,Description="Total read depth per bp at the locus; bases in reads overlapping / bases in haplotype">
+##INFO=<ID=AF,Number=A,Type=Float,Description="Estimated allele frequency in the range (0,1]">
+##INFO=<ID=RO,Number=1,Type=Integer,Description="Reference allele observation count, with partial observations recorded fractionally">
+##INFO=<ID=AO,Number=A,Type=Integer,Description="Alternate allele observations, with partial observations recorded fractionally">
+##INFO=<ID=PRO,Number=1,Type=Float,Description="Reference allele observation count, with partial observations recorded fractionally">
+##INFO=<ID=PAO,Number=A,Type=Float,Description="Alternate allele observations, with partial observations recorded fractionally">
+##INFO=<ID=QR,Number=1,Type=Integer,Description="Reference allele quality sum in phred">
+##INFO=<ID=QA,Number=A,Type=Integer,Description="Alternate allele quality sum in phred">
+##INFO=<ID=PQR,Number=1,Type=Float,Description="Reference allele quality sum in phred for partial observations">
+##INFO=<ID=PQA,Number=A,Type=Float,Description="Alternate allele quality sum in phred for partial observations">
+##INFO=<ID=SRF,Number=1,Type=Integer,Description="Number of reference observations on the forward strand">
+##INFO=<ID=SRR,Number=1,Type=Integer,Description="Number of reference observations on the reverse strand">
+##INFO=<ID=SAF,Number=A,Type=Integer,Description="Number of alternate observations on the forward strand">
+##INFO=<ID=SAR,Number=A,Type=Integer,Description="Number of alternate observations on the reverse strand">
+##INFO=<ID=SRP,Number=1,Type=Float,Description="Strand balance probability for the reference allele: Phred-scaled upper-bounds estimate of the probability of observing the deviation between SRF and SRR given E(SRF/SRR) ~ 0.5, derived using Hoeffding's inequality">
+##INFO=<ID=SAP,Number=A,Type=Float,Description="Strand balance probability for the alternate allele: Phred-scaled upper-bounds estimate of the probability of observing the deviation between SAF and SAR given E(SAF/SAR) ~ 0.5, derived using Hoeffding's inequality">
+##INFO=<ID=AB,Number=A,Type=Float,Description="Allele balance at heterozygous sites: a number between 0 and 1 representing the ratio of reads showing the reference allele to all reads, considering only reads from individuals called as heterozygous">
+##INFO=<ID=ABP,Number=A,Type=Float,Description="Allele balance probability at heterozygous sites: Phred-scaled upper-bounds estimate of the probability of observing the deviation between ABR and ABA given E(ABR/ABA) ~ 0.5, derived using Hoeffding's inequality">
+##INFO=<ID=RUN,Number=A,Type=Integer,Description="Run length: the number of consecutive repeats of the alternate allele in the reference genome">
+##INFO=<ID=RPP,Number=A,Type=Float,Description="Read Placement Probability: Phred-scaled upper-bounds estimate of the probability of observing the deviation between RPL and RPR given E(RPL/RPR) ~ 0.5, derived using Hoeffding's inequality">
+##INFO=<ID=RPPR,Number=1,Type=Float,Description="Read Placement Probability for reference observations: Phred-scaled upper-bounds estimate of the probability of observing the deviation between RPL and RPR given E(RPL/RPR) ~ 0.5, derived using Hoeffding's inequality">
+##INFO=<ID=RPL,Number=A,Type=Float,Description="Reads Placed Left: number of reads supporting the alternate balanced to the left (5') of the alternate allele">
+##INFO=<ID=RPR,Number=A,Type=Float,Description="Reads Placed Right: number of reads supporting the alternate balanced to the right (3') of the alternate allele">
+##INFO=<ID=EPP,Number=A,Type=Float,Description="End Placement Probability: Phred-scaled upper-bounds estimate of the probability of observing the deviation between EL and ER given E(EL/ER) ~ 0.5, derived using Hoeffding's inequality">
+##INFO=<ID=EPPR,Number=1,Type=Float,Description="End Placement Probability for reference observations: Phred-scaled upper-bounds estimate of the probability of observing the deviation between EL and ER given E(EL/ER) ~ 0.5, derived using Hoeffding's inequality">
+##INFO=<ID=DPRA,Number=A,Type=Float,Description="Alternate allele depth ratio.  Ratio between depth in samples with each called alternate allele and those without.">
+##INFO=<ID=ODDS,Number=1,Type=Float,Description="The log odds ratio of the best genotype combination to the second-best.">
+##INFO=<ID=GTI,Number=1,Type=Integer,Description="Number of genotyping iterations required to reach convergence or bailout.">
+##INFO=<ID=TYPE,Number=A,Type=String,Description="The type of allele, either snp, mnp, ins, del, or complex.">
+##INFO=<ID=CIGAR,Number=A,Type=String,Description="The extended CIGAR representation of each alternate allele, with the exception that '=' is replaced by 'M' to ease VCF parsing.  Note that INDEL alleles do not have the first matched base (which is provided by default, per the spec) referred to by the CIGAR.">
+##INFO=<ID=NUMALT,Number=1,Type=Integer,Description="Number of unique non-reference alleles in called genotypes at this position.">
+##INFO=<ID=MEANALT,Number=A,Type=Float,Description="Mean number of unique non-reference allele observations per sample with the corresponding alternate alleles.">
+##INFO=<ID=LEN,Number=A,Type=Integer,Description="allele length">
+##INFO=<ID=MQM,Number=A,Type=Float,Description="Mean mapping quality of observed alternate alleles">
+##INFO=<ID=MQMR,Number=1,Type=Float,Description="Mean mapping quality of observed reference alleles">
+##INFO=<ID=PAIRED,Number=A,Type=Float,Description="Proportion of observed alternate alleles which are supported by properly paired read fragments">
+##INFO=<ID=PAIREDR,Number=1,Type=Float,Description="Proportion of observed reference alleles which are supported by properly paired read fragments">
+##FORMAT=<ID=GT,Number=1,Type=String,Description="Genotype">
+##FORMAT=<ID=GQ,Number=1,Type=Float,Description="Genotype Quality, the Phred-scaled marginal (or unconditional) probability of the called genotype">
+##FORMAT=<ID=GL,Number=G,Type=Float,Description="Genotype Likelihood, log10-scaled likelihoods of the data given the called genotype for each possible genotype generated from the reference and alternate alleles given the sample ploidy">
+##FORMAT=<ID=DP,Number=1,Type=Integer,Description="Read Depth">
+##FORMAT=<ID=RO,Number=1,Type=Integer,Description="Reference allele observation count">
+##FORMAT=<ID=QR,Number=1,Type=Integer,Description="Sum of quality of the reference observations">
+##FORMAT=<ID=AO,Number=A,Type=Integer,Description="Alternate allele observation count">
+##FORMAT=<ID=QA,Number=A,Type=Integer,Description="Sum of quality of the alternate observations">
+##source_20190808.1=vcf-merge(r953) 1060.vcf_fixed.vcf.gz 1173.vcf_fixed.vcf.gz 1392.vcf_fixed.vcf.gz 1584.vcf_fixed.vcf.gz 1657.vcf_fixed.vcf.gz 1661.vcf_fixed.vcf.gz 1662.vcf_fixed.vcf.gz 1665.vcf_fixed.vcf.gz 1666.vcf_fixed.vcf.gz 1669.vcf_fixed.vcf.gz 1674.vcf_fixed.vcf.gz 1685.vcf_fixed.vcf.gz 1708.vcf_fixed.vcf.gz 1717.vcf_fixed.vcf.gz 1718.vcf_fixed.vcf.gz 1721.vcf_fixed.vcf.gz 1739.vcf_fixed.vcf.gz 1740.vcf_fixed.vcf.gz 1741.vcf_fixed.vcf.gz 1751.vcf_fixed.vcf.gz 1776.vcf_fixed.vcf.gz 1798.vcf_fixed.vcf.gz 1801.vcf_fixed.vcf.gz 1812.vcf_fixed.vcf.gz 1816.vcf_fixed.vcf.gz 1825.vcf_fixed.vcf.gz 1830.vcf_fixed.vcf.gz 1832.vcf_fixed.vcf.gz 1833.vcf_fixed.vcf.gz 1838.vcf_fixed.vcf.gz 310.vcf_fixed.vcf.gz 365.vcf_fixed.vcf.gz 682.vcf_fixed.vcf.gz 737.vcf_fixed.vcf.gz 76.vcf_fixed.vcf.gz 968.vcf_fixed.vcf.gz 99.vcf_fixed.vcf.gz
+##sourceFiles_20190808.1=0:1060.vcf_fixed.vcf.gz,1:1173.vcf_fixed.vcf.gz,2:1392.vcf_fixed.vcf.gz,3:1584.vcf_fixed.vcf.gz,4:1657.vcf_fixed.vcf.gz,5:1661.vcf_fixed.vcf.gz,6:1662.vcf_fixed.vcf.gz,7:1665.vcf_fixed.vcf.gz,8:1666.vcf_fixed.vcf.gz,9:1669.vcf_fixed.vcf.gz,10:1674.vcf_fixed.vcf.gz,11:1685.vcf_fixed.vcf.gz,12:1708.vcf_fixed.vcf.gz,13:1717.vcf_fixed.vcf.gz,14:1718.vcf_fixed.vcf.gz,15:1721.vcf_fixed.vcf.gz,16:1739.vcf_fixed.vcf.gz,17:1740.vcf_fixed.vcf.gz,18:1741.vcf_fixed.vcf.gz,19:1751.vcf_fixed.vcf.gz,20:1776.vcf_fixed.vcf.gz,21:1798.vcf_fixed.vcf.gz,22:1801.vcf_fixed.vcf.gz,23:1812.vcf_fixed.vcf.gz,24:1816.vcf_fixed.vcf.gz,25:1825.vcf_fixed.vcf.gz,26:1830.vcf_fixed.vcf.gz,27:1832.vcf_fixed.vcf.gz,28:1833.vcf_fixed.vcf.gz,29:1838.vcf_fixed.vcf.gz,30:310.vcf_fixed.vcf.gz,31:365.vcf_fixed.vcf.gz,32:682.vcf_fixed.vcf.gz,33:737.vcf_fixed.vcf.gz,34:76.vcf_fixed.vcf.gz,35:968.vcf_fixed.vcf.gz,36:99.vcf_fixed.vcf.gz
+##INFO=<ID=SF,Number=.,Type=String,Description="Source File (index to sourceFiles, f when filtered)">
+##INFO=<ID=AC,Number=.,Type=Integer,Description="Allele count in genotypes">
+##INFO=<ID=AN,Number=1,Type=Integer,Description="Total number of alleles in called genotypes">
+#CHROM	POS	ID	REF	ALT	QUAL	FILTER	INFO	FORMAT	S1060	S1173	S1392	S1584	S1657	S1661	S1662	S1665	S1666	S1669	S1674	S1685	S1708	S1717	S1718	S1721	S1739	S1740	S1741	S1751	S1776	S1798	S1801	S1812	S1816	S1825	S1830	S1832	S1833	S1838	S310	S365	S682	S737	S76	S968	S99
+chr1	11905995	.	C	A	464.06	.	AB=0.617647;ABP=7.09778;AC=1;AF=0.5;AN=2;AO=21;CIGAR=1X;DP=34;DPB=34;DPRA=0;EPP=3.94093;EPPR=3.17734;GTI=0;LEN=1;MEANALT=1;MQM=41.1429;MQMR=42;NS=1;NUMALT=1;ODDS=60.6669;PAIRED=0.952381;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=742;QR=485;RO=13;RPL=4;RPP=20.4855;RPPR=7.18621;RPR=17;RUN=1;SAF=13;SAP=5.59539;SAR=8;SF=9;SRF=8;SRP=4.51363;SRR=5;TYPE=snp	GT:GL:AO:DP:QA:QR:RO:AD	.	.	.	.	.	.	.	.	.	0/1:-54.0842,0,-32.1566:21:34:742:485:13:13,21	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr1	11906068	.	A	G	969.24	.	AB=0.508197;ABP=3.0459;AC=7;AF=0.5;AN=14;AO=31;CIGAR=1X;DP=517;DPB=61;DPRA=0;EPP=3.08035;EPPR=3.29983;GTI=0;LEN=1;MEANALT=1;MQM=40.2258;MQMR=42;NS=1;NUMALT=1;ODDS=164.336;PAIRED=0.935484;PAIREDR=0.966667;PAO=0;PQA=0;PQR=0;PRO=0;QA=1115;QR=1148;RO=30;RPL=18;RPP=4.76149;RPPR=13.4334;RPR=13;RUN=1;SAF=17;SAP=3.64073;SAR=14;SF=9,13,20,23,25,28,34;SRF=17;SRP=4.16842;SRR=13;TYPE=snp	GT:GL:AO:DP:QA:QR:RO:AD	.	.	.	.	.	.	.	.	.	0/1:-77.146,0,-81.0553:31:61:1115:1148:30:30,31	.	.	.	0/1:-103.928,0,-92.7608:40:77:1510:1362:36	.	.	.	.	.	.	0/1:-119.414,0,-115.856:47:90:1706:1655:43:43,47	.	.	0/1:-78.1988,0,-75.549:30:58:1103:1075:28	.	0/1:-196.481,0,-116.761:72:120:2703:1775:48:48,72	.	.	0/1:-69.0727,0,-72.3758:27:55:989:1032:28	.	.	.	.	.	0/1:-89.4417,0,-56.6879:33:56:1223:846:23	.	.
+chr1	11907422	.	C	T	1594.68	.	AB=0.51938;ABP=3.43113;AC=1;AF=0.5;AN=2;AO=67;CIGAR=1X;DP=129;DPB=129;DPRA=0;EPP=5.63551;EPPR=5.25182;GTI=0;LEN=1;MEANALT=1;MQM=41.7015;MQMR=41.9677;NS=1;NUMALT=1;ODDS=356.033;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=2392;QR=2301;RO=62;RPL=28;RPP=6.93191;RPPR=3.57068;RPR=39;RUN=1;SAF=46;SAP=23.2666;SAR=21;SF=28;SRF=32;SRP=3.15039;SRR=30;TYPE=snp	GT:GL:AO:DP:QA:QR:RO	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-168.393,0,-161.097:67:129:2392:2301:62	.	.	.	.	.	.	.	.
+chr1	11907603	.	G	A	2318.85	.	AB=0.459184;ABP=5.84651;AC=6;AF=0.5;AN=12;AO=90;CIGAR=1X;DP=1151;DPB=196;DPRA=0;EPP=3.87889;EPPR=29.5596;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=41.4528;NS=1;NUMALT=1;ODDS=479.456;PAIRED=0.988889;PAIREDR=0.981132;PAO=0;PQA=0;PQR=0;PRO=0;QA=3262;QR=3747;RO=106;RPL=14;RPP=95.7563;RPPR=67.2531;RPR=76;RUN=1;SAF=42;SAP=3.87889;SAR=48;SF=13,20,23,25,28,34;SRF=60;SRP=7.02548;SRR=46;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-225.214,0,-264.701:196:106:90:3262:3747	.	.	.	.	.	.	0/1:-299.889,0,-307.29:239:120:117:4273:4373:120,117	.	.	0/1:-330.41,0,-193.213:204:81:123:4505:2950	.	0/1:-348.535,0,-294.268:262:120:141:4915:4308:120,141	.	.	0/1:-124.836,0,-127.592:107:52:54:1805:1846	.	.	.	.	.	0/1:-160.193,0,-204.665:143:78:65:2335:2851	.	.
+chr1	11907648	.	C	T	3636.22	.	AB=0.514905;ABP=3.72235;AC=2;AF=0.5;AN=4;AO=190;CIGAR=1X;DP=555;DPB=369;DPRA=0;EPP=4.65605;EPPR=6.13332;GTI=0;LEN=1;MEANALT=2;MQM=41.6;MQMR=41.8876;NS=1;NUMALT=1;ODDS=998.841;PAIRED=0.989474;PAIREDR=0.988764;PAO=0;PQA=0;PQR=0;PRO=0;QA=6875;QR=6360;RO=178;RPL=86;RPP=6.71323;RPPR=6.96287;RPR=104;RUN=1;SAF=101;SAP=4.65605;SAR=89;SF=26,35;SRF=81;SRP=6.13332;SRR=97;TYPE=snp	GT:GL:DP:RO:AO:QA:QR	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-482.941,0,-441.944:369:178:190:6875:6360	.	.	.	.	.	.	.	.	0/1:-260.728,0,-227.341:186:88:98:3658:3267	.
+chr1	78383301	.	T	C	1349.90	.	AB=0.422535;ABP=10.4117;AC=1;AF=0.5;AN=2;AO=60;CIGAR=1X;DP=142;DPB=142;DPRA=0;EPP=4.31318;EPPR=4.70511;GTI=0;LEN=1;MEANALT=1;MQM=41.4;MQMR=42;NS=1;NUMALT=1;ODDS=310.827;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2163;QR=3062;RO=82;RPL=18;RPP=23.8564;RPPR=30.1272;RPR=42;RUN=1;SAF=29;SAP=3.15506;SAR=31;SF=9;SRF=36;SRP=5.65844;SRR=46;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	0/1:-144.119,0,-222.172:142:82:60:2163:3062:82,60	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr1	78390821	.	CAAAAAGT	CAAAAGT	971.86	.	AB=0.52381;ABP=3.42391;AC=2;AF=0.5;AN=4;AO=44;CIGAR=1M1D5M;DP=173;DPB=78;DPRA=0;EPP=15.6443;EPPR=21.525;GTI=0;LEN=1;MEANALT=3;MQM=42;MQMR=42;NS=1;NUMALT=1;ODDS=210.018;PAIRED=1;PAIREDR=1;PAO=0.5;PQA=19.5;PQR=19.5;PRO=0.5;QA=1620;QR=1431;RO=38;RPL=19;RPP=4.78696;RPPR=3.9246;RPR=25;RUN=1;SAF=25;SAP=4.78696;SAR=19;SF=13,27;SRF=19;SRP=3.0103;SRR=19;TYPE=del	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:.,.,-98.9954:84:38:44:1620:1431	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-94.7249,0,-130.683:89:49:40:1396:1808:49,40	.	.	.	.	.	.	.	.	.
+chr1	78392446	.	G	A	1163.31	.	AB=0.407407;ABP=7.03155;AC=8;AF=0.5;AN=16;AO=22;CIGAR=1X;DP=734;DPB=54;DPRA=0;EPP=9.32731;EPPR=3.0103;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=42;NS=1;NUMALT=1;ODDS=111.599;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=825;QR=1201;RO=32;RPL=13;RPP=4.58955;RPPR=5.45321;RPR=9;RUN=1;SAF=8;SAP=6.56362;SAR=14;SF=6,7,8,11,13,18,29,33;SRF=17;SRP=3.28173;SRR=15;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	0/1:-55.2646,0,-88.2237:54:32:22:825:1201:32,22	0/1:-138.282,0,-98.8486:92:39:53:1919:1455	0/1:-143.069,0,-87.8713:87:36:51:1959:1310	.	.	0/1:-196.641,0,-140.029:129:56:73:2725:2061	.	0/1:-141.189,0,-183.657:127:71:56:2113:2561	.	.	.	.	0/1:-99.0943,0,-51.5201:58:23:35:1348:789	.	.	.	.	.	.	.	.	.	.	0/1:-163.347,0,-137.361:119:55:64:2311:2002	.	.	.	0/1:-53.2674,0,-125.085:68:45:23:865:1680	.	.	.
+chr1	78395131	.	A	C	3236.90	.	AB=0.459649;ABP=7.04086;AC=1;AF=0.5;AN=2;AO=131;CIGAR=1X;DP=285;DPB=285;DPRA=0;EPP=5.81167;EPPR=5.77399;GTI=0;LEN=1;MEANALT=1;MQM=41.9847;MQMR=41.8831;NS=1;NUMALT=1;ODDS=745.323;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=4890;QR=5855;RO=154;RPL=96;RPP=64.6901;RPPR=12.5422;RPR=35;RUN=1;SAF=57;SAP=7.8008;SAR=74;SF=17;SRF=62;SRP=15.7007;SRR=92;TYPE=snp	GT:GL:DP:RO:AO:QA:QR	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-338.006,0,-419.028:285:154:131:4890:5855	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr1	78401656	.	TAGAAGAAGAGC	TAGAAGAGC	2240.45	.	AB=0.47619;ABP=4.04433;AC=1;AF=0.5;AN=2;AO=100;CIGAR=1M3D8M;DP=210;DPB=185;DPRA=0;EPP=22.5536;EPPR=115.189;GTI=0;LEN=3;MEANALT=5;MQM=41.22;MQMR=41.6792;NS=1;NUMALT=1;ODDS=515.883;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3437;QR=3943;RO=106;RPL=68;RPP=31.1526;RPPR=3.09224;RPR=32;RUN=1;SAF=39;SAP=13.5202;SAR=61;SF=10;SRF=46;SRP=7.02548;SRR=60;TYPE=del	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	0/1:-236.498,0,-277.85:210:106:100:3437:3943:106,100	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr1	112321032	.	T	A	3814.19	.	AB=0.586572;ABP=21.4333;AC=6;AF=0.5;AN=10;AO=166;CIGAR=1X;DP=1056;DPB=283;DPRA=0;EPP=30.69;EPPR=14.61;GTI=0;LEN=1;MEANALT=1;MQM=41.7952;MQMR=42;NS=1;NUMALT=1;ODDS=627.598;PAIRED=1;PAIREDR=0.991453;PAO=0;PQA=0;PQR=0;PRO=0;QA=5999;QR=4244;RO=117;RPL=70;RPP=11.8532;RPPR=7.18621;RPR=96;RUN=1;SAF=80;SAP=3.48122;SAR=86;SF=11,16,23,30,36;SRF=53;SRP=5.25601;SRR=64;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	.	0/1:-433.515,0,-282.928:283:117:166:5999:4244	.	.	.	.	0/1:-225.863,0,-214.934:168:83:85:3210:3067:83,85	.	.	.	.	.	.	0/1:-364.622,0,-246.616:231:97:133:5028:3657	.	.	.	.	.	.	0/1:-268.128,0,-169.651:169:70:99:3701:2544	.	.	.	.	.	1/1:-663.815,-61.7112,0:205:0:205:7679:0
+chr1	112329551	.	G	T	2899.37	.	AB=0.530466;ABP=5.2596;AC=9;AF=0.5;AN=18;AO=148;CIGAR=1X;DP=2236;DPB=279;DPRA=0;EPP=3.5385;EPPR=4.35297;GTI=0;LEN=1;MEANALT=1;MQM=41.7365;MQMR=41.6565;NS=1;NUMALT=1;ODDS=712.676;PAIRED=1;PAIREDR=0.984733;PAO=0;PQA=0;PQR=0;PRO=0;QA=5349;QR=4805;RO=131;RPL=31;RPP=111.525;RPPR=46.1248;RPR=117;RUN=1;SAF=108;SAP=70.8541;SAR=40;SF=11,12,14,17,18,19,20,25,32;SRF=101;SRP=86.5705;SRR=30;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	.	0/1:-378.236,0,-329.802:279:131:148:5349:4805	0/1:-343.557,0,-357.605:275:137:136:4963:5094:137,136	.	0/1:-154.973,0,-240.991:154:89:65:2336:3315	.	.	0/1:-357.018,0,-379.072:288:149:139:5135:5380	0/1:-162.298,0,-207.772:140:77:63:2358:2887	0/1:-422.66,0,-278.819:274:115:159:5874:4239	0/1:-316.498,0,-349.94:258:133:125:4594:4942:133,125	.	.	.	.	0/1:-468.233,0,-513.343:388:203:185:6754:7311:203,185	.	.	.	.	.	.	0/1:-220.179,0,-251.298:180:94:86:3173:3530	.	.	.	.
+chr1	112524680	.	C	G	3786.83	.	AB=0.530744;ABP=5.5472;AC=1;AF=0.5;AN=2;AO=164;CIGAR=1X;DP=309;DPB=309;DPRA=0;EPP=4.91696;EPPR=3.38993;GTI=0;LEN=1;MEANALT=3;MQM=39.9085;MQMR=41.5944;NS=1;NUMALT=1;ODDS=775.059;PAIRED=0.914634;PAIREDR=0.958042;PAO=0;PQA=0;PQR=0;PRO=0;QA=5747;QR=5103;RO=143;RPL=65;RPP=18.3165;RPPR=59.5141;RPR=99;RUN=1;SAF=77;SAP=4.33437;SAR=87;SF=11;SRF=75;SRP=3.75437;SRR=68;TYPE=snp	GT:GL:DP:RO:AO:QA:QR	.	.	.	.	.	.	.	.	.	.	.	0/1:-387.808,0,-349.69:309:143:164:5747:5103	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr1	112524788	.	G	A	9661.17	.	AB=0.449489;ABP=22.5338;AC=1;AF=0.5;AN=2;AO=396;CIGAR=1X;DP=881;DPB=881;DPRA=0;EPP=3.0103;EPPR=3.23059;GTI=0;LEN=1;MEANALT=2;MQM=41.8258;MQMR=40.913;NS=1;NUMALT=1;ODDS=2224.57;PAIRED=0.982323;PAIREDR=0.921325;PAO=0;PQA=0;PQR=0;PRO=0;QA=14413;QR=17187;RO=483;RPL=238;RPP=38.1048;RPPR=32.5073;RPR=158;RUN=1;SAF=214;SAP=8.62542;SAR=182;SF=12;SRF=264;SRP=12.1143;SRR=219;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-979.835,0,-1209:881:483:396:14413:17187:483,396	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr1	112525085	.	G	A	9683.29	.	AB=0.49284;ABP=3.38344;AC=8;AF=0.5;AN=16;AO=413;CIGAR=1X;DP=5838;DPB=838;DPRA=0;EPP=4.90837;EPPR=15.2778;GTI=0;LEN=1;MEANALT=1;MQM=41.937;MQMR=42;NS=1;NUMALT=1;ODDS=2482.14;PAIRED=0.995157;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=15485;QR=15479;RO=425;RPL=204;RPP=3.14175;RPPR=19.6106;RPR=209;RUN=1;SAF=195;SAP=5.79168;SAR=218;SF=5,7,9,13,15,17,19,32;SRF=198;SRP=7.30726;SRR=227;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	0/1:-1086.27,0,-1093.69:838:425:413:15485:15479:425,413	.	0/1:-1036.45,0,-960.325:784:383:400:14765:13814	.	0/1:-879.683,0,-718.936:619:286:332:12414:10414:286,332	.	.	.	0/1:-1064.68,0,-874.666:763:354:409:15006:12686	.	0/1:-975.87,0,-917.806:753:369:384:13986:13159	.	0/1:-999.05,0,-794.782:707:323:383:14024:11578	.	0/1:-1034.86,0,-891.616:750:356:393:14632:12858	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-750.201,0,-843.397:624:327:294:10825:11858	.	.	.	.
+chr1	116243868	.	A	G	6351.89	.	AB=0.390335;ABP=31.1103;AC=4;AF=0.5;AN=6;AO=105;CIGAR=1X;DP=1011;DPB=269;DPRA=0;EPP=18.0865;EPPR=14.9269;GTI=0;LEN=1;MEANALT=1;MQM=41.9619;MQMR=41.75;NS=1;NUMALT=1;ODDS=536.946;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3987;QR=6066;RO=164;RPL=21;RPP=85.092;RPPR=115.079;RPR=84;RUN=1;SAF=87;SAP=101.471;SAR=18;SF=3,23,26;SRF=133;SRP=140.766;SRR=31;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	0/1:-263.455,0,-443.334:269:164:105:3987:6066:164,105	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-342.121,0,-379.641:273:143:130:4908:5334	.	.	1/1:-1467.99,-140.28,0:469:0:466:17081:0	.	.	.	.	.	.	.	.	.	.
+chr1	116243877	.	G	A	5438.23	.	AB=0.429508;ABP=16.1744;AC=29;AF=0.5;AN=44;AO=131;CIGAR=1X;DP=7069;DPB=305;DPRA=0;EPP=11.7791;EPPR=24.11;GTI=0;LEN=1;MEANALT=2;MQM=41.9847;MQMR=42;NS=1;NUMALT=1;ODDS=687.29;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=4849;QR=6455;RO=173;RPL=29;RPP=91.3445;RPPR=157.662;RPR=102;RUN=1;SAF=106;SAP=111.766;SAR=25;SF=0,2,5,8,9,11,12,14,16,17,19,20,21,22,25,27,28,30,32,33,34,36;SRF=138;SRP=136.173;SRR=35;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	0/1:-328.312,0,-467.348:305:173:131:4849:6455:173,131	.	1/1:-1080.3,-102.651,0:342:0:341:12546:0	.	.	0/1:-422.708,0,-414.085:322:159:162:6008:5903:159,162	.	.	1/1:-734.098,-69.5379,0:231:0:231:8490:0	0/1:-377.104,0,-401.018:301:155:146:5403:5706:155,146	.	0/1:-483.731,0,-584.225:421:228:192:7063:8204	0/1:-505.527,0,-596.879:426:227:199:7314:8439:227,199	.	0/1:-310.678,0,-327.616:249:128:121:4450:4672	.	0/1:-422.769,0,-401.121:319:155:163:5994:5749:155,163	0/1:-436.895,0,-494.88:362:189:172:6306:6972	.	1/1:-934.431,-87.6989,0:299:1:297:10810:29	0/1:-434.093,0,-538.832:377:201:174:6317:7554:201,174	0/1:-498.547,0,-102.051:235:55:179:6562:2000:55,179	1/1:-760.495,-63.6182,0:246:3:242:8886:116	.	.	1/1:-1619.22,-153.525,0:511:0:510:18763:0:0,510	.	0/1:-509.23,0,-676.146:467:257:209:7517:9449:257,209	0/1:-393.904,0,-260.016:261:109:150:5440:3893	.	1/1:-851.315,-77.3964,0:269:1:268:9888:37	.	0/1:-334.734,0,-357.837:268:136:130:4797:5089	1/1:-864.536,-82.1812,0:274:0:273:10034:0	0/1:-353.596,0,-365.644:275:139:136:5035:5174	.	0/1:-391.431,0,-399.853:309:151:157:5615:5698
+chr1	116245655	.	G	C	5038.92	.	AB=0.554377;ABP=12.6926;AC=16;AF=0.5;AN=28;AO=209;CIGAR=1X;DP=4983;DPB=377;DPRA=0;EPP=9.50394;EPPR=13.1438;GTI=0;LEN=1;MEANALT=1;MQM=41.5024;MQMR=41.7619;NS=1;NUMALT=1;ODDS=936.444;PAIRED=0.966507;PAIREDR=0.994048;PAO=0;PQA=0;PQR=0;PRO=0;QA=7600;QR=6299;RO=168;RPL=172;RPP=192.365;RPPR=127.146;RPR=37;RUN=1;SAF=88;SAP=14.3248;SAR=121;SF=0,2,8,9,14,16,19,20,21,25,27,28,30,32;SRF=67;SRP=17.9521;SRR=101;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	0/1:-540.366,0,-430.334:377:168:209:7600:6299:168,209	.	1/1:-1293.61,-123.545,0:437:3:434:15060:89	.	.	.	.	.	1/1:-1012.31,-96.9317,0:323:0:322:11679:0	0/1:-309.041,0,-490.167:323:186:136:4776:6806:186,136	.	.	.	.	0/1:-353.848,0,-376.891:286:145:141:5075:5346	.	0/1:-620.105,0,-542.816:449:210:238:8718:7848:210,238	.	.	0/1:-439.243,0,-376.416:321:146:175:6171:5494	0/1:-563.111,0,-646.264:474:250:224:8154:9205:250,224	0/1:-127.149,0,-358.934:191:131:60:2121:4802:131,60	.	.	.	0/1:-550.233,0,-746.312:513:285:226:8113:10400:285,226	.	0/1:-530.206,0,-544.981:422:213:209:7570:7754:213,209	0/1:-281.95,0,-300.309:234:117:117:4050:4285	.	0/1:-402.75,0,-405.486:318:156:162:5766:5794	.	0/1:-450.872,0,-347.224:315:139:175:6281:5107	.	.	.	.
+chr1	116247790	.	G	A	3235.25	.	AB=0.54023;ABP=4.23331;AC=28;AF=0.5;AN=50;AO=47;CIGAR=1X;DP=5527;DPB=87;DPRA=0;EPP=4.16534;EPPR=4.96463;GTI=0;LEN=1;MEANALT=1;MQM=41.617;MQMR=41.95;NS=1;NUMALT=1;ODDS=200.739;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1697;QR=1387;RO=40;RPL=20;RPP=5.27418;RPPR=13.6505;RPR=27;RUN=1;SAF=29;SAP=8.60069;SAR=18;SF=1,3,4,5,6,9,11,12,13,14,17,19,21,22,24,25,27,28,29,30,31,33,34,35,36;SRF=26;SRP=10.8276;SRR=14;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	0/1:-121.29,0,-95.0995:87:40:47:1697:1387	.	0/1:-243.558,0,-305.008:220:122:98:3599:4256:122,98	0/1:-453.614,0,-273.901:291:120:171:6236:4177	0/1:-441.057,0,-337.082:305:137:168:6140:4924:137,168	0/1:-291.145,0,-221.302:203:91:112:4054:3237:91,112	.	.	0/1:-253.03,0,-238.343:192:95:97:3578:3394:95,97	.	0/1:-365.74,0,-305.782:287:132:155:5192:4491	0/1:-402.517,0,-351.019:297:140:157:5656:5060:140,157	0/1:-378.485,0,-320.291:283:134:147:5343:4643	0/1:-219.787,0,-233.334:178:93:85:3147:3298	.	.	0/1:-360.736,0,-383.904:299:152:146:5190:5433	.	0/1:-329.839,0,-286.079:250:116:134:4672:4148	.	0/1:-195.984,0,-66.7371:112:35:77:2645:1146:35,77	1/1:-399.49,-40.037,0:133:0:133:4585:0	.	0/1:-200.519,0,-146.203:140:63:77:2794:2152:63,77	0/1:-458.417,0,-415.849:349:171:178:6516:5979:171,178	.	0/1:-410.554,0,-388.986:328:163:165:5911:5596:163,165	0/1:-213.614,0,-220.329:176:89:87:3066:3124	0/1:-420.679,0,-413.314:339:171:167:6035:5903	0/1:-189.308,0,-193.587:153:78:74:2739:2778	0/1:-184.798,0,-144.147:131:59:72:2577:2101	.	1/1:-668.902,-63.8184,0:212:0:212:7707:0	0/1:-264.636,0,-232.93:200:95:104:3741:3370	0/1:-179.562,0,-135.367:125:57:68:2499:1980	1/1:-741.003,-71.3441,0:237:0:237:8587:0
+chr1	116247824	.	C	T	3636.74	.	AB=0.557823;ABP=7.27939;AC=3;AF=0.5;AN=4;AO=82;CIGAR=1X;DP=323;DPB=147;DPRA=0;EPP=5.65844;EPPR=3.04371;GTI=0;LEN=1;MEANALT=1;MQM=41.7561;MQMR=41.9692;NS=1;NUMALT=1;ODDS=349.547;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=2831;QR=2336;RO=65;RPL=39;RPP=3.434;RPPR=3.04371;RPR=43;RUN=1;SAF=31;SAP=13.6028;SAR=51;SF=21,22;SRF=38;SRP=7.05258;SRR=27;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-201.707,0,-158.839:147:65:82:2831:2336:65,82	1/1:-537.074,-50.1025,0:176:1:175:6206:29	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr1	116260532	.	A	T	7258.18	.	AB=0.535176;ABP=7.28777;AC=46;AF=0.5;AN=64;AO=213;CIGAR=1X;DP=11195;DPB=398;DPRA=0;EPP=21.8603;EPPR=15.7926;GTI=0;LEN=1;MEANALT=1;MQM=41.7465;MQMR=42;NS=1;NUMALT=1;ODDS=1084.7;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=7979;QR=7002;RO=185;RPL=76;RPP=40.9448;RPPR=43.8692;RPR=137;RUN=1;SAF=99;SAP=5.30411;SAR=114;SF=0,1,2,3,4,5,6,8,9,11,12,13,14,16,17,18,19,20,21,22,24,25,27,28,29,30,31,32,33,34,35,36;SRF=87;SRP=4.43056;SRR=98;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	0/1:-569.173,0,-484.156:398:185:213:7979:7002:185,213	0/1:-136.122,0,-238.22:141:85:56:2068:3252	1/1:-1219.84,-117.402,0:391:0:390:14146:0	0/1:-424.903,0,-477.528:342:177:164:6098:6746:177,164	0/1:-555.124,0,-684.368:470:252:218:8043:9569	0/1:-588.319,0,-697.229:493:260:232:8560:9823:260,232	0/1:-353.416,0,-466.824:311:171:140:5153:6492:171,140	.	1/1:-849.438,-80.074,0:266:0:266:9810:0	1/1:-1125.07,-105.963,0:352:0:352:12986:0:0,352	.	0/1:-556.283,0,-536.245:424:207:217:7884:7676	1/1:-1658.89,-156.837,0:521:0:521:19227:0:0,521	0/1:-473.775,0,-615.1:418:229:189:6915:8595	1/1:-886.624,-83.6863,0:278:0:278:10231:0	.	0/1:-601.9,0,-530.289:430:203:227:8481:7717:203,227	0/1:-556.49,0,-533.117:412:202:210:7856:7616	0/1:-327.743,0,-283.651:234:109:125:4591:4105	1/1:-1221.3,-115.596,0:385:0:384:14127:0	0/1:-625.337,0,-587.673:465:222:240:8850:8441:222,240	1/1:-598.674,-58.3998,0:194:0:194:6919:0:0,194	1/1:-611.671,-59.0019,0:196:0:196:7040:0	.	0/1:-256.993,0,-277.053:204:105:99:3671:3915:105,99	1/1:-1588.05,-151.117,0:502:0:502:18350:0:0,502	.	1/1:-1299.74,-125.53,0:419:0:417:15059:0:0,417	1/1:-754.493,-69.7277,0:244:1:243:8781:39	0/1:-622.3,0,-559.375:466:217:249:8809:8110	1/1:-1005.15,-94.5234,0:314:0:314:11619:0	0/1:-360.441,0,-255.37:234:100:134:4966:3773	0/1:-481.374,0,-405.33:341:156:184:6737:5878	1/1:-1209.9,-115.596,0:385:0:384:13964:0	0/1:-480.376,0,-396.483:332:151:181:6707:5752	0/1:-226.722,0,-292.313:197:108:89:3300:4076	1/1:-1377.65,-129.75,0:436:1:435:16000:15
+chr1	116260544	.	C	T	6433.45	.	AB=0.526316;ABP=5.41035;AC=25;AF=0.5;AN=40;AO=210;CIGAR=1X;DP=7358;DPB=399;DPRA=0;EPP=33.1627;EPPR=27.4509;GTI=0;LEN=1;MEANALT=2;MQM=41.8286;MQMR=42;NS=1;NUMALT=1;ODDS=1119.17;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=7886;QR=7147;RO=188;RPL=89;RPP=13.5988;RPPR=5.9672;RPR=121;RUN=1;SAF=95;SAP=7.14644;SAR=115;SF=0,2,5,8,9,11,14,16,17,19,20,21,25,27,28,30,32,33,34,36;SRF=87;SRP=5.27418;SRR=101;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	0/1:-559.25,0,-496.395:399:188:210:7886:7147:188,210	.	1/1:-1220.73,-108.915,0:386:2:382:14278:76	.	.	0/1:-582.688,0,-687.557:488:260:227:8520:9682:260,227	.	.	1/1:-837.334,-76.7691,0:260:1:259:9724:15	0/1:-430.733,0,-471.798:342:177:164:6181:6652:177,164	.	0/1:-550.175,0,-543.872:420:208:212:7850:7751	.	.	0/1:-340.782,0,-378.221:273:139:134:4887:5335	.	0/1:-596.628,0,-523.559:425:199:223:8425:7616:199,223	0/1:-536.894,0,-514.316:395:195:200:7604:7334	.	1/1:-1225.47,-114.993,0:382:0:382:14242:0	0/1:-618.611,0,-584.85:454:221:232:8786:8363:221,232	0/1:-89.1417,0,-396.815:190:143:47:1718:5240:143,47	.	.	.	1/1:-1579.04,-148.408,0:494:0:493:18325:0:0,493	.	0/1:-522.589,0,-520.583:410:205:204:7533:7459:205,204	0/1:-279.922,0,-346.522:242:130:112:4084:4867	.	0/1:-371.536,0,-468.976:323:177:144:5423:6557	.	0/1:-487.246,0,-397.107:340:156:182:6827:5771	1/1:-1224.93,-114.692,0:381:0:381:14191:0	0/1:-467.41,0,-384.116:322:148:173:6544:5571	.	0/1:-581.449,0,-529.744:432:207:224:8293:7673
+chr1	116268178	.	GAAAAAAAAAAAAAAAAAAAAAAAGAAAGAGCTTC	GAAAAAAAAAAAAAAAAAAAAAGAAAGAGCTTC,GAAAAAAAAAAAAAAAAAAAAGAAAGAGCTTC,GAAAAAAAAAAAAAAAAAAAGAAAGAGCTTC,GAAAAAAAAAAAAAAAAAAAAAAGAAAGAGCTTC,GAAAAAAAAAAAAAAAAAAGAAAGAGCTTC	542.94	.	AB=0.114504,0.10687;ABP=172.103,178.866;AC=17,14,6,2,1;AF=0.5,0.5;AN=42;AO=15,14;CIGAR=1M2D32M,1M4D30M;DP=2625;DPB=123.943;DPRA=0,0;EPP=3.15506,3.63072;EPPR=3.25157;GTI=0;LEN=2,4;MEANALT=55,55;MQM=31.8667,32.3571;MQMR=32.2222;NS=1;NUMALT=2;ODDS=8.02554;PAIRED=0.8,0.642857;PAIREDR=0.888889;PAO=0.5,0.5;PQA=18.5,18.5;PQR=18.5;PRO=0.5;QA=413,349;QR=326;RO=9;RPL=12,10;RPP=14.7363,8.59409;RPPR=5.18177;RPR=3,4;RUN=1,1;SAF=9,4;SAP=4.31318,8.59409;SAR=6,10;SF=0,2,3,5,6,8,9,10,12,14,16,18,19,20,21,22,24,25,27,28,33;SRF=1;SRP=14.8328;SRR=8;TYPE=del,del	GT:GL:DP:RO:AO:QA:QR:AD	1/3:-27.3162,-5.26942,-15.1948,.,.,.,-10.3157,0,.,-20.5418,.,.,.,.,.,.,.,.,.,.,.:131:9:15,.,14,.,.:413,.,349,.,.:326:9,15,14	.	1/2:.,.,-25.5977,.,0,-23.0627,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.:111:4:29,26,.,.,.:687,718,.,.,.:146	2/3:-43.2427,.,.,-10.3539,.,-25.8272,-15.0083,.,0,-30.7823,.,.,.,.,.,.,.,.,.,.,.:129:10:.,18,17,.,.:.,526,469,.,.:362:10,18,17	.	1/2:-74.6549,-29.7438,-48.994,-21.4481,0,-38.5916,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.:156:11:25,32,.,.,.:668,784,.,.,.:412:11,25,32	4/1:-31.1475,-9.89248,-16.5758,.,.,.,.,.,.,.,-12.1654,0,.,.,-20.0529,.,.,.,.,.,.:85:6:14,.,.,10,.:344,.,.,306,.:219:6,10,14	.	3/3:.,.,.,.,.,.,.,.,.,0,.,.,.,.,.,.,.,.,.,.,.:77:2:.,.,24,.,.:.,.,484,.,.:73	1/2:-67.3195,-47.9952,-48.5625,-16.0519,0,-12.105,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.:88:2:11,26,.,.,.:288,720,.,.,.:68:2,11,26	0/4:-27.7358,.,.,.,.,.,.,.,.,.,0,.,.,.,-12.5923,.,.,.,.,.,.:100:10:.,.,.,19,.:.,.,.,453,.:367:10,19	.	2/5:-129.087,.,.,-56.2632,.,-39.7065,.,.,.,.,.,.,.,.,.,-76.4393,.,0,.,.,-63.495:226:0:.,43,.,.,31:.,1058,.,.,785:0:0,43,31	.	1/1:.,.,0,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.:79:1:19,.,.,.,.:497,.,.,.,.:36	.	1/2:-83.6097,-39.4224,-51.4261,-27.6711,0,-37.267,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.:151:8:23,31,.,.,.:640,816,.,.,.:288:8,23,31	.	0/2:.,.,.,.,.,-8.14005,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.:81:5:.,19,.,.,.:.,494,.,.,.:177	2/2:.,.,.,.,.,0,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.:120:2:.,30,.,.,.:.,755,.,.,.:75	1/2:-35.3923,-0.413055,-13.5151,-17.6628,0,-33.4732,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.:145:9:23,14,.,.,.:546,312,.,.,.:329:9,23,14	1/2:-61.9354,-25.9046,-24.5419,-32.2805,0,-32.7237,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.:95:2:19,13,.,.,.:498,406,.,.,.:75:2,19,13	1/1:.,.,0,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.:106:3:29,.,.,.,.:814,.,.,.,.:103	.	1/2:-41.1748,-19.0456,-20.0206,-18.7501,0,-17.9186,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.:79:3:11,17,.,.,.:323,360,.,.,.:94:3,11,17	2/3:-139.448,.,.,-75.0957,.,-54.4944,-73.5172,.,0,-52.0128,.,.,.,.,.,.,.,.,.,.,.:259:2:.,41,44,.,.:.,1077,1105,.,.:65:2,41,44	.	1/2:-138.224,-70.2667,-51.8206,-75.2698,0,-57.4258,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.:235:1:38,36,.,.,.:1026,970,.,.,.:32:1,38,36	1/1:.,.,0,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.:92:1:23,.,.,.,.:513,.,.,.,.:36	.	.	.	.	1/3:.,.,-9.6798,.,.,.,.,0,.,-12.0739,.,.,.,.,.,.,.,.,.,.,.:80:0:20,.,17,.,.:459,.,440,.,.:0	.	.	.
+chr1	116280971	.	G	C	2469.36	.	AB=0.486111;ABP=3.37221;AC=1;AF=0.5;AN=2;AO=105;CIGAR=1X;DP=216;DPB=216;DPRA=0;EPP=5.51266;EPPR=6.87947;GTI=0;LEN=1;MEANALT=2;MQM=41.981;MQMR=41.9636;NS=1;NUMALT=1;ODDS=568.592;PAIRED=0.990476;PAIREDR=0.963636;PAO=0;PQA=0;PQR=0;PRO=0;QA=3752;QR=3963;RO=110;RPL=78;RPP=56.8008;RPPR=69.4179;RPR=27;RUN=1;SAF=36;SAP=25.5316;SAR=69;SF=9;SRF=40;SRP=20.7769;SRR=70;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	0/1:-261.627,0,-279.465:216:110:105:3752:3963:110,105	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr1	116283343	.	A	G	5629.36	.	AB=0.550218;ABP=8.0265;AC=60;AF=0.5;AN=68;AO=126;CIGAR=1X;DP=7124;DPB=229;DPRA=0;EPP=5.49198;EPPR=3.20004;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=41.6311;NS=1;NUMALT=1;ODDS=550.536;PAIRED=0.992063;PAIREDR=0.980583;PAO=0;PQA=0;PQR=0;PRO=0;QA=4704;QR=3708;RO=103;RPL=40;RPP=39.4772;RPPR=53.6288;RPR=86;RUN=1;SAF=71;SAP=7.42218;SAR=55;SF=0,1,3,4,5,6,7,8,10,11,12,13,14,15,16,17,18,19,20,21,23,24,25,26,27,28,29,30,31,32,33,34,35,36;SRF=60;SRP=9.10307;SRR=43;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	0/1:-337.9,0,-252.032:229:103:126:4704:3708:103,126	1/1:-267.533,-25.5876,0:85:0:85:3083:0	.	1/1:-553.164,-51.4761,0:172:0:171:6396:0:0,171	1/1:-741.472,-69.2369,0:230:0:230:8602:0	1/1:-769.855,-71.9462,0:239:0:239:8902:0:0,239	1/1:-619.869,-58.3998,0:194:0:194:7167:0:0,194	1/1:-817.466,-78.2678,0:260:0:260:9490:0	0/1:-167.316,0,-251.645:162:94:68:2499:3467	.	1/1:-644.893,-60.206,0:200:0:200:7469:0:0,200	1/1:-983.74,-93.3193,0:311:0:310:11380:0	1/1:-949.023,-89.7069,0:298:0:298:11016:0:0,298	1/1:-803.297,-77.9668,0:259:0:259:9298:0	0/1:-209.488,0,-224.414:169:87:82:3005:3208	1/1:-612.993,-58.7009,0:199:0:195:7139:0	0/1:-320.265,0,-296.564:238:117:120:4528:4265:117,120	1/1:-710.946,-66.8287,0:224:0:222:8233:0	1/1:-489.95,-45.7566,0:152:0:152:5659:0	0/1:-284.176,0,-200.007:187:81:106:3930:2953	1/1:-924.171,-84.2463,0:292:1:291:10787:38:1,291	0/1:-26.1174,0,-245.169:107:87:19:668:3191:87,19	.	1/1:-903.01,-84.2884,0:280:0:280:10439:0	1/1:-322.643,-30.0092,0:105:1:104:3736:16:1,104	1/1:-1002.08,-96.9317,0:322:0:322:11644:0:0,322	1/1:-869.974,-83.6863,0:279:0:278:10062:0	1/1:-813.199,-77.0637,0:256:0:256:9399:0:0,256	0/1:-199.491,0,-181.521:148:70:76:2812:2597	1/1:-933.029,-89.7069,0:299:0:298:10786:0	1/1:-594.618,-55.9916,0:186:0:186:6861:0	1/1:-515.9,-49.0679,0:163:0:163:5948:0	0/1:-175.643,0,-285.328:180:107:73:2651:3912	1/1:-469.048,-43.6494,0:148:0:145:5425:0	1/1:-665.754,-63.2163,0:211:0:210:7695:0	1/1:-449.893,-41.8432,0:139:0:139:5193:0	1/1:-646.153,-60.507,0:201:0:201:7494:0
+chr1	116310967	.	T	C	5773.83	.	AB=0.467626;ABP=4.27569;AC=35;AF=0.5;AN=56;AO=65;CIGAR=1X;DP=9634;DPB=139;DPRA=0;EPP=3.31097;EPPR=22.847;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=42;NS=1;NUMALT=1;ODDS=367.587;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=2401;QR=2752;RO=74;RPL=38;RPP=7.05258;RPPR=17.2129;RPR=27;RUN=1;SAF=41;SAP=12.665;SAR=24;SF=1,2,3,4,5,6,7,8,9,12,13,14,17,18,19,20,21,22,25,27,28,29,30,31,33,34,35,36;SRF=58;SRP=54.7735;SRR=16;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	0/1:-167.347,0,-197.497:139:74:65:2401:2752	0/1:-427.79,0,-533.729:388:208:180:6248:7495	0/1:-391.226,0,-460.054:334:176:157:5662:6461:176,157	0/1:-477.874,0,-523.156:396:205:191:6859:7398	0/1:-472.69,0,-574.19:409:215:192:6840:8033:215,192	0/1:-326.574,0,-290.021:246:114:132:4607:4189:114,132	0/1:-520.533,0,-608.754:449:237:211:7578:8588	0/1:-281.591,0,-442.52:286:167:119:4242:6171	0/1:-256.939,0,-461.433:280:170:110:3916:6320:170,110	.	.	0/1:-601.542,0,-715.444:519:275:243:8722:10039:275,243	0/1:-516.754,0,-579.8:440:227:213:7464:8210	0/1:-390.368,0,-351.254:286:135:151:5478:5040	.	.	0/1:-502.932,0,-492.381:391:192:198:7132:7026	0/1:-323.806,0,-353.517:261:135:126:4625:4973	0/1:-365.515,0,-402.602:303:157:146:5248:5681	0/1:-445.784,0,-509.379:370:193:177:6403:7158:193,177	0/1:-404.883,0,-157.895:228:72:155:5429:2604:72,155	1/1:-692.09,-62.0625,0:229:2:227:8008:75	.	.	1/1:-1826.91,-173.945,0:590:1:588:21046:38:1,588	.	1/1:-1531.72,-147.092,0:501:1:500:17670:39:1,500	0/1:-348.638,0,-348.488:278:141:137:4966:5017	0/1:-707.572,0,-689.914:582:283:293:10127:9988	0/1:-396.849,0,-367.318:294:141:153:5573:5255	1/1:-863.079,-85.4925,0:284:0:284:9893:0	.	1/1:-906.878,-88.8039,0:295:0:295:10428:0	1/1:-942.407,-90.008,0:299:0:299:10826:0	0/1:-268.483,0,-213.808:195:87:108:3768:3127	1/1:-1138.23,-108.973,0:362:0:362:13079:0
+chr1	156084760	.	C	T	1715.80	.	AB=0.482143;ABP=3.47562;AC=1;AF=0.5;AN=2;AO=81;CIGAR=1X;DP=168;DPB=168;DPRA=0;EPP=39.7109;EPPR=67.9298;GTI=0;LEN=1;MEANALT=1;MQM=41.7778;MQMR=41.7586;NS=1;NUMALT=1;ODDS=395.079;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3000;QR=3084;RO=87;RPL=0;RPP=178.9;RPPR=191.928;RPR=81;RUN=1;SAF=59;SAP=39.7109;SAR=22;SF=23;SRF=69;SRP=67.9298;SRR=18;TYPE=snp	GT:GL:DP:RO:AO:QA:QR	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-208.848,0,-218.445:168:87:81:3000:3084	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr1	156104779	.	G	T	3105.61	.	AB=0.544304;ABP=7.05089;AC=1;AF=0.5;AN=2;AO=129;CIGAR=1X;DP=237;DPB=237;DPRA=0;EPP=7.87507;EPPR=3.09072;GTI=0;LEN=1;MEANALT=1;MQM=41.0155;MQMR=41.787;NS=1;NUMALT=1;ODDS=575.116;PAIRED=0.992248;PAIREDR=0.981481;PAO=0;PQA=0;PQR=0;PRO=0;QA=4753;QR=3929;RO=108;RPL=103;RPP=102.814;RPPR=26.2531;RPR=26;RUN=1;SAF=34;SAP=65.6463;SAR=95;SF=11;SRF=22;SRP=85.3654;SRR=86;TYPE=snp	GT:GL:DP:RO:AO:QA:QR	.	.	.	.	.	.	.	.	.	.	.	0/1:-335.246,0,-267.864:237:108:129:4753:3929	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr1	156105028	.	T	C	922.43	.	AB=0.494624;ABP=3.03365;AC=11;AF=0.5;AN=22;AO=46;CIGAR=1X;DP=994;DPB=93;DPRA=0;EPP=12.2627;EPPR=4.16534;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=42;NS=1;NUMALT=1;ODDS=245.27;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1627;QR=1762;RO=47;RPL=23;RPP=3.0103;RPPR=31.8863;RPR=23;RUN=1;SAF=17;SAP=9.80795;SAR=29;SF=0,4,5,8,9,12,13,14,24,29,31;SRF=23;SRP=3.0565;SRR=24;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	0/1:-113.993,0,-125.188:93:47:46:1627:1762:47,46	.	.	.	0/1:-102.971,0,-192.474:114:72:42:1581:2610	0/1:-166.179,0,-100.375:106:43:63:2276:1537:43,63	.	.	0/1:-76.0732,0,-152.128:89:57:32:1179:2058	0/1:-125.014,0,-116.874:95:47:48:1764:1672:47,48	.	.	0/1:-135.274,0,-176.363:122:66:55:1968:2454:66,55	0/1:-100.976,0,-125.426:90:49:41:1466:1754	0/1:-81.3367,0,-113.973:79:45:34:1201:1585	.	.	.	.	.	.	.	.	.	0/1:-39.4289,0,-62.9623:39:23:16:583:857:23,16	.	.	.	.	0/1:-101.937,0,-150.906:102:60:42:1520:2099	.	0/1:-62.6161,0,-96.7139:65:39:26:940:1337	.	.	.	.	.
+chr1	156105928	.	G	A	3398.14	.	AB=0.564885;ABP=12.5913;AC=10;AF=0.5;AN=20;AO=148;CIGAR=1X;DP=2831;DPB=262;DPRA=0;EPP=3.5385;EPPR=3.49071;GTI=0;LEN=1;MEANALT=2;MQM=41.9865;MQMR=41.8142;NS=1;NUMALT=1;ODDS=625.924;PAIRED=1;PAIREDR=0.99115;PAO=0;PQA=0;PQR=0;PRO=0;QA=5263;QR=4162;RO=113;RPL=82;RPP=6.76636;RPPR=13.1759;RPR=66;RUN=1;SAF=51;SAP=34.0565;SAR=97;SF=0,4,5,8,12,13,14,24,29,31;SRF=39;SRP=26.5506;SRR=74;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	0/1:-380.055,0,-282.971:262:113:148:5263:4162:113,148	.	.	.	0/1:-466.602,0,-352.093:329:147:182:6533:5218	0/1:-386.367,0,-469.209:338:182:155:5643:6551:182,155	.	.	0/1:-274.362,0,-219.04:199:91:108:3864:3196	.	.	.	0/1:-482.91,0,-542.125:419:217:198:7067:7681:217,198	0/1:-318.756,0,-391.827:290:157:132:4671:5507	0/1:-289.24,0,-245.709:213:100:112:4056:3555	.	.	.	.	.	.	.	.	.	0/1:-196.98,0,-110.261:120:47:73:2679:1676:47,73	.	.	.	.	0/1:-492.466,0,-663.423:479:271:208:7433:9354	.	0/1:-212.511,0,-234.45:182:95:87:3069:3310	.	.	.	.	.
+chr1	156106185	.	T	C	7255.10	.	AB=0.492754;ABP=3.29354;AC=11;AF=0.5;AN=22;AO=306;CIGAR=1X;DP=6393;DPB=621;DPRA=0;EPP=3.0103;EPPR=3.70185;GTI=0;LEN=1;MEANALT=2;MQM=41.9739;MQMR=42;NS=1;NUMALT=1;ODDS=1763.08;PAIRED=0.993464;PAIREDR=0.993631;PAO=0;PQA=0;PQR=0;PRO=0;QA=11097;QR=11571;RO=314;RPL=118;RPP=37.7822;RPPR=14.0751;RPR=188;RUN=1;SAF=153;SAP=3.0103;SAR=153;SF=0,4,5,8,9,11,12,14,24,29,31;SRF=159;SRP=3.12095;SRR=155;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	0/1:-776.734,0,-814.999:621:314:306:11097:11571:314,306	.	.	.	0/1:-904.309,0,-897.44:697:347:348:12847:12804	0/1:-1040.95,0,-1029.59:803:397:406:14814:14694:397,406	.	.	0/1:-641.777,0,-549.264:465:215:250:9042:7963	0/1:-590.342,0,-633.498:479:247:232:8507:9000:247,232	.	0/1:-752.249,0,-846.753:654:337:312:10909:12013	0/1:-1008.11,0,-1069.23:807:411:396:14476:15185:411,396	.	0/1:-499.174,0,-530.084:402:205:195:7163:7513	.	.	.	.	.	.	.	.	.	0/1:-410.562,0,-484.378:347:184:163:5931:6814:184,163	.	.	.	.	0/1:-1011.08,0,-923.484:776:368:403:14353:13393	.	0/1:-448.408,0,-421.175:342:167:175:6347:6047	.	.	.	.	.
+chr1	156106863	.	C	T	3835.76	.	AB=0.512635;ABP=3.39442;AC=11;AF=0.5;AN=22;AO=142;CIGAR=1X;DP=3742;DPB=277;DPRA=0;EPP=7.96493;EPPR=5.72866;GTI=0;LEN=1;MEANALT=1;MQM=41.6127;MQMR=42;NS=1;NUMALT=1;ODDS=735.218;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=4705;QR=4773;RO=135;RPL=68;RPP=3.56081;RPPR=3.15506;RPR=74;RUN=1;SAF=62;SAP=7.96493;SAR=80;SF=0,4,5,8,9,12,13,14,24,29,31;SRF=58;SRP=8.81698;SRR=77;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	0/1:-327.225,0,-332.327:277:135:142:4705:4773:135,142	.	.	.	0/1:-462.281,0,-543.624:420:219:200:6791:7719	0/1:-503.507,0,-567.535:448:231:216:7320:8065:231,216	.	.	0/1:-366.888,0,-320.07:294:132:159:5342:4703	0/1:-393.201,0,-380.415:325:155:168:5627:5508:155,168	.	.	0/1:-499.975,0,-481.306:417:199:215:7189:6970:199,215	0/1:-501.065,0,-579.222:466:242:222:7341:8253	0/1:-242.267,0,-296.303:226:117:108:3549:4245	.	.	.	.	.	.	.	.	.	0/1:-161.461,0,-205.061:154:82:71:2375:2885:82,71	.	.	.	.	0/1:-610.179,0,-542.99:510:241:267:8776:8028	.	0/1:-251.013,0,-239.146:205:101:104:3584:3449	.	.	.	.	.
+chr1	156106964	.	C	T	1792.14	.	AB=0.480263;ABP=3.5246;AC=1;AF=0.5;AN=2;AO=73;CIGAR=1X;DP=152;DPB=152;DPRA=0;EPP=28.0269;EPPR=4.35716;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=42;NS=1;NUMALT=1;ODDS=412.656;PAIRED=1;PAIREDR=0.987342;PAO=0;PQA=0;PQR=0;PRO=0;QA=2699;QR=2893;RO=79;RPL=44;RPP=9.70319;RPPR=12.9331;RPR=29;RUN=1;SAF=29;SAP=9.70319;SAR=44;SF=24;SRF=43;SRP=4.35716;SRR=36;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-188.459,0,-205.272:152:79:73:2699:2893:79,73	.	.	.	.	.	.	.	.	.	.	.	.
+chr1	156107534	.	C	T	4648.48	.	AB=0.455696;ABP=5.70403;AC=14;AF=0.5;AN=24;AO=72;CIGAR=1X;DP=3624;DPB=158;DPRA=0;EPP=3.49285;EPPR=3.24022;GTI=0;LEN=1;MEANALT=2;MQM=41.375;MQMR=40.7529;NS=1;NUMALT=1;ODDS=371.905;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=2520;QR=2808;RO=85;RPL=52;RPP=33.8935;RPPR=41.8669;RPR=20;RUN=1;SAF=32;SAP=4.9405;SAR=40;SF=1,6,7,10,21,22,25,26,27,28,33,34;SRF=45;SRP=3.64897;SRR=40;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	0/1:-171.42,0,-195.597:158:85:72:2520:2808	.	.	.	.	0/1:-337.765,0,-317.005:268:133:135:4819:4618:133,135	0/1:-550.086,0,-557.539:461:232:223:7951:8032	.	.	0/1:-358.973,0,-348.93:297:146:150:5243:5096:146,150	.	.	.	.	.	.	.	.	.	.	0/1:-125.109,0,-208.437:144:87:57:1941:2884:87,57	0/1:-121.667,0,-264.297:162:104:57:1960:3595	.	.	1/1:-1596.86,-155.934,0:524:0:518:18449:0:0,518	0/1:-345.614,0,-519.905:373:213:156:5340:7328	1/1:-1210.69,-115.008,0:420:3:412:14196:114:3,412	0/1:-277.492,0,-245.017:223:107:115:3987:3606	.	.	.	.	0/1:-364.122,0,-377.152:312:158:153:5273:5443	0/1:-306.844,0,-346.916:282:146:134:4539:5008	.	.
+chr1	156108976	.	G	C	893.11	.	AB=0.434211;ABP=5.8675;AC=11;AF=0.5;AN=22;AO=33;CIGAR=1X;DP=930;DPB=76;DPRA=0;EPP=4.65535;EPPR=7.10075;GTI=0;LEN=1;MEANALT=1;MQM=41.4545;MQMR=42;NS=1;NUMALT=1;ODDS=163.235;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1204;QR=1607;RO=43;RPL=28;RPP=37.8197;RPPR=51.5402;RPR=5;RUN=1;SAF=14;SAP=4.65535;SAR=19;SF=0,4,5,8,9,12,13,14,24,29,31;SRF=20;SRP=3.46479;SRR=23;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	0/1:-80.8148,0,-116.869:76:43:33:1204:1607:43,33	.	.	.	0/1:-101.26,0,-127.696:90:49:39:1477:1770	0/1:-140.288,0,-138.217:108:54:54:1994:1973:54,54	.	.	0/1:-103.965,0,-94.6757:80:37:41:1495:1360	0/1:-109.499,0,-51.8369:64:23:41:1479:828:23,41	.	.	0/1:-135.57,0,-181.135:127:71:56:2012:2580:71,56	0/1:-112.624,0,-105.133:86:41:45:1628:1506	0/1:-85.5973,0,-70.0734:62:28:34:1199:1044	.	.	.	.	.	.	.	.	.	0/1:-25.2888,0,-81.6541:42:30:12:433:1081:30,12	.	.	.	.	0/1:-137.877,0,-169.264:132:72:59:2108:2440	.	0/1:-77.6509,0,-75.6998:63:31:31:1109:1083	.	.	.	.	.
+chr1	162313735	.	C	T	7377.83	.	AB=0.474419;ABP=5.45447;AC=23;AF=0.5;AN=34;AO=204;CIGAR=1X;DP=6356;DPB=430;DPRA=0;EPP=10.206;EPPR=19.9593;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=41.9823;NS=1;NUMALT=1;ODDS=1192.43;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=7577;QR=8395;RO=226;RPL=99;RPP=3.3935;RPPR=18.3836;RPR=105;RUN=1;SAF=90;SAP=9.14152;SAR=114;SF=0,4,6,14,18,19,20,21,22,23,26,29,30,32,33,34,36;SRF=103;SRP=6.85361;SRR=123;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	0/1:-526.652,0,-597.693:430:226:204:7577:8395:226,204	.	.	.	0/1:-702.055,0,-502.564:459:199:260:9739:7409	.	1/1:-1051.17,-99.0389,0:329:0:329:12149:0:0,329	.	.	.	.	.	.	.	0/1:-309.192,0,-280.754:231:110:119:4369:4035	.	.	.	0/1:-387.538,0,-359.796:289:140:148:5477:5150	1/1:-1394.36,-124.891,0:438:2:435:16235:75	0/1:-584.153,0,-620.912:467:237:227:8444:8778:237,227	0/1:-96.8302,0,-343.471:173:124:48:1725:4568:124,48	0/1:-256.692,0,-253.725:205:99:103:3722:3625	0/1:-609.886,0,-452.386:412:180:232:8499:6669	.	.	0/1:-559.005,0,-566.144:458:228:228:8085:8163	.	.	1/1:-1632.19,-157.193,0:530:1:526:18939:16	0/1:-421.726,0,-561.292:383:215:168:6202:7890	.	0/1:-488.565,0,-490.348:384:191:191:6969:6980	1/1:-1290.81,-123.422,0:413:0:410:14915:0	1/1:-1084.89,-100.991,0:341:1:339:12560:15	.	1/1:-1291.21,-119.494,0:414:2:410:14963:51
+chr1	162335256	.	C	T	4216.02	.	AB=0.53277;ABP=7.42211;AC=14;AF=0.5;AN=26;AO=252;CIGAR=1X;DP=4342;DPB=473;DPRA=0;EPP=3.872;EPPR=6.23763;GTI=0;LEN=1;MEANALT=2;MQM=41.6905;MQMR=41.9083;NS=1;NUMALT=1;ODDS=1194.01;PAIRED=0.984127;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=8985;QR=7675;RO=218;RPL=101;RPP=24.5527;RPPR=3.05014;RPR=151;RUN=1;SAF=116;SAP=6.45708;SAR=136;SF=7,8,14,15,18,20,21,22,23,28,31,32,33;SRF=100;SRP=6.23763;SRR=118;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	0/1:-637.91,0,-526.969:473:218:252:8985:7675	0/1:-393.057,0,-431.941:326:169:155:5648:6084	.	.	.	.	.	0/1:-324.002,0,-405.068:283:155:128:4715:5631	0/1:-573.13,0,-539.614:446:220:226:8164:7777	.	.	0/1:-343.739,0,-279.109:246:111:134:4809:4056	.	0/1:-493.443,0,-653.487:455:253:202:7264:9100:253,202	0/1:-78.1965,0,-395.725:190:144:46:1551:5212:144,46	0/1:-199.579,0,-257.713:189:99:88:2934:3607	0/1:-585.412,0,-561.786:450:219:231:8317:8010	.	.	.	.	0/1:-330.206,0,-341.58:269:135:134:4715:4852	.	.	1/1:-723.384,-71.0431,0:236:0:236:8319:0	0/1:-519.125,0,-542.281:417:213:203:7446:7664	0/1:-411.145,0,-506.487:362:197:164:5995:7068	.	.	.
+chr1	201328705	.	G	A	2688.83	.	AB=0.574879;ABP=13.0914;AC=3;AF=0.5;AN=6;AO=119;CIGAR=1X;DP=599;DPB=207;DPRA=0;EPP=6.09416;EPPR=4.58955;GTI=0;LEN=1;MEANALT=1;MQM=41.6975;MQMR=41.7955;NS=1;NUMALT=1;ODDS=464.99;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=4290;QR=3181;RO=88;RPL=39;RPP=33.6846;RPPR=34.9902;RPR=80;RUN=1;SAF=70;SAP=11.0575;SAR=49;SF=6,18,34;SRF=56;SRP=17.2236;SRR=32;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	0/1:-307.572,0,-214.254:207:88:119:4290:3181:88,119	.	.	.	.	.	.	.	.	.	.	.	0/1:-185.908,0,-217.288:159:85:74:2699:3040	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-347.413,0,-234.627:233:96:137:4803:3495	.	.
+chr1	201328824	.	G	A	6154.62	.	AB=0.512658;ABP=3.66999;AC=9;AF=0.5;AN=18;AO=243;CIGAR=1X;DP=4464;DPB=474;DPRA=0;EPP=10.5256;EPPR=17.3082;GTI=0;LEN=1;MEANALT=1;MQM=41.9918;MQMR=41.9091;NS=1;NUMALT=1;ODDS=1308.12;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=9052;QR=8529;RO=231;RPL=197;RPP=206.762;RPPR=159.441;RPR=46;RUN=1;SAF=98;SAP=22.7501;SAR=145;SF=3,11,15,20,23,30,32,33,36;SRF=94;SRP=20.3915;SRR=137;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	0/1:-640.311,0,-595.12:474:231:243:9052:8529:231,243	.	.	.	.	.	.	.	0/1:-665.486,0,-753.874:564:296:266:9637:10702	.	.	.	0/1:-666.573,0,-645.847:516:256:260:9510:9264	.	.	.	.	0/1:-838.304,0,-705.536:591:274:317:11759:10228:274,317	.	.	0/1:-735.717,0,-688.786:543:263:279:10403:9877	.	.	.	.	.	.	0/1:-567.443,0,-570.23:441:220:221:8129:8123	.	0/1:-560.839,0,-544.3:423:208:215:7969:7764	0/1:-489.922,0,-564.362:409:217:192:7072:7930	.	.	0/1:-641.164,0,-666.556:503:254:249:9176:9478
+chr1	201330366	.	G	C	2658.25	.	AB=0.516129;ABP=3.50063;AC=1;AF=0.5;AN=2;AO=112;CIGAR=1X;DP=217;DPB=217;DPRA=0;EPP=4.25114;EPPR=3.19643;GTI=0;LEN=1;MEANALT=1;MQM=41.6071;MQMR=41.4762;NS=1;NUMALT=1;ODDS=574.123;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=4072;QR=3888;RO=105;RPL=17;RPP=120.968;RPPR=113.218;RPR=95;RUN=1;SAF=69;SAP=16.1167;SAR=43;SF=3;SRF=70;SRP=28.3441;SRR=35;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	0/1:-286.807,0,-270.562:217:105:112:4072:3888:105,112	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr1	201330429	.	T	C	4694.70	.	AB=0.505405;ABP=3.1042;AC=1;AF=0.5;AN=2;AO=187;CIGAR=1X;DP=370;DPB=370;DPRA=0;EPP=8.13126;EPPR=13.7484;GTI=0;LEN=1;MEANALT=2;MQM=41.9037;MQMR=41.989;NS=1;NUMALT=1;ODDS=1067.86;PAIRED=0.994652;PAIREDR=0.994505;PAO=0;PQA=0;PQR=0;PRO=0;QA=6847;QR=6761;RO=182;RPL=60;RPP=55.1372;RPPR=20.2389;RPR=127;RUN=1;SAF=99;SAP=4.41537;SAR=88;SF=32;SRF=94;SRP=3.43982;SRR=88;TYPE=snp	GT:GL:DP:RO:AO:QA:QR	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-482.521,0,-473.691:370:182:187:6847:6761	.	.	.	.
+chr1	201331256	.	G	A	650.02	.	AB=0.5;ABP=3.0103;AC=1;AF=0.5;AN=2;AO=37;CIGAR=1X;DP=74;DPB=74;DPRA=0;EPP=34.0565;EPPR=16.2152;GTI=0;LEN=1;MEANALT=1;MQM=40.9459;MQMR=40.8919;NS=1;NUMALT=1;ODDS=149.673;PAIRED=1;PAIREDR=0.972973;PAO=0;PQA=0;PQR=0;PRO=0;QA=1150;QR=1218;RO=37;RPL=11;RPP=16.2152;RPPR=5.88603;RPR=26;RUN=1;SAF=29;SAP=28.8919;SAR=8;SF=29;SRF=25;SRP=12.9286;SRR=12;TYPE=snp	GT:GL:DP:RO:AO:QA:QR	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-77.9195,0,-83.0838:74:37:37:1150:1218	.	.	.	.	.	.	.
+chr1	201334382	.	G	A	9703.30	.	AB=0;ABP=0;AC=59;AF=1;AN=74;AO=361;CIGAR=1X;DP=14850;DPB=361;DPRA=0;EPP=17.4527;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=41.9945;MQMR=0;NS=1;NUMALT=1;ODDS=505.057;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=13538;QR=0;RO=0;RPL=205;RPP=17.4527;RPPR=0;RPR=156;RUN=1;SAF=163;SAP=10.3789;SAR=198;SF=0,1,2,3,4,5,6,7,8,9,10,11,12,13,14,15,16,17,18,19,20,21,22,23,24,25,26,27,28,29,30,31,32,33,34,35,36;SRF=0;SRP=0;SRR=0;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	1/1:-1170.71,-108.672,0:361:0:361:13538:0:0,361	1/1:-455.257,-42.4452,0:141:0:141:5285:0	1/1:-1400.39,-133.055,0:442:0:442:16235:0	0/1:-482.598,0,-494.192:375:189:186:6880:7001:189,186	1/1:-1486.21,-139.979,0:466:0:465:17234:0	0/1:-758.224,0,-775.742:584:297:287:10809:11015:297,287	1/1:-1056.9,-99.3399,0:330:0:330:12225:0:0,330	0/1:-759.398,0,-702.596:564:272:290:10735:10057	1/1:-1212.67,-112.886,0:375:0:375:14062:0	1/1:-1061.64,-95.9272,0:338:2:336:12350:62:2,336	0/1:-547.896,0,-585.046:441:226:213:7876:8307:226,213	0/1:-553.748,0,-596.861:454:235:219:7980:8488	1/1:-1857.76,-174.597,0:580:0:580:21516:0:0,580	0/1:-616.522,0,-558.916:453:216:237:8720:8033	1/1:-1161.86,-108.371,0:360:0:360:13438:0	1/1:-1393.25,-130.79,0:440:1:438:16172:16	0/1:-523.285,0,-547.371:406:208:198:7484:7725:208,198	1/1:-1498.09,-136.319,0:469:2:466:17404:52	0/1:-371.812,0,-372.029:284:143:141:5285:5270	1/1:-1537.39,-144.795,0:481:0:481:17806:0	1/1:-1683.99,-156.536,0:521:0:520:19486:0:0,520	0/1:-87.0195,0,-347.414:173:127:46:1595:4606:127,46	0/1:-235.311,0,-253.647:194:100:94:3384:3591	1/1:-1475.68,-136.367,0:454:0:453:17086:0	0/1:-237.385,0,-256.079:189:98:91:3399:3602:98,91	1/1:-2019.23,-190.552,0:633:0:633:23394:0:0,633	0/1:-685.699,0,-642.761:529:255:271:9777:9241	1/1:-1577.78,-149.913,0:498:0:498:18264:0:0,498	1/1:-841.062,-77.2186,0:269:1:267:9745:39	1/1:-1986.84,-189.348,0:629:0:629:23030:0	1/1:-1080.64,-100.544,0:334:0:334:12498:0	0/1:-367.059,0,-389.79:293:151:142:5256:5501	0/1:-493.64,0,-524.54:393:201:191:7074:7408	1/1:-1137.97,-105.963,0:352:0:352:13156:0	1/1:-1167.3,-108.973,0:362:0:362:13495:0	1/1:-780.029,-72.2472,0:240:0:240:9026:0	0/1:-481.775,0,-658.395:443:250:192:7124:9143
+chr1	201334425	.	C	T	3838.29	.	AB=0.517241;ABP=3.75908;AC=1;AF=0.5;AN=2;AO=150;CIGAR=1X;DP=290;DPB=290;DPRA=0;EPP=5.84769;EPPR=6.05036;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=42;NS=1;NUMALT=1;ODDS=796.144;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=5607;QR=5135;RO=140;RPL=98;RPP=33.6425;RPPR=38.7465;RPR=52;RUN=1;SAF=52;SAP=33.6425;SAR=98;SF=16;SRF=55;SRP=16.9698;SRR=85;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-397.259,0,-358:290:140:150:5607:5135:140,150	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr1	201334795	.	C	T	6177.30	.	AB=0.513514;ABP=3.89063;AC=9;AF=0.5;AN=18;AO=285;CIGAR=1X;DP=4458;DPB=555;DPRA=0;EPP=21.304;EPPR=10.2485;GTI=0;LEN=1;MEANALT=1;MQM=41.8386;MQMR=41.9778;NS=1;NUMALT=1;ODDS=1565.57;PAIRED=0.996491;PAIREDR=0.996296;PAO=0;PQA=0;PQR=0;PRO=0;QA=10795;QR=9943;RO=270;RPL=182;RPP=50.5617;RPPR=65.2913;RPR=103;RUN=1;SAF=142;SAP=3.01792;SAR=143;SF=5,9,17,18,19,25,27,30,33;SRF=135;SRP=3.0103;SRR=135;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	0/1:-762.884,0,-694.463:555:270:285:10795:9943:270,285	.	.	.	0/1:-571.764,0,-601.314:452:232:219:8197:8518:232,219	.	.	.	.	.	.	.	0/1:-761.142,0,-878.393:625:333:292:11012:12340	0/1:-399.497,0,-343.17:283:134:148:5608:4946	0/1:-685.271,0,-687.971:525:263:261:9779:9778	.	.	.	.	.	0/1:-693.793,0,-904.265:609:338:271:10179:12576:338,271	.	0/1:-780.31,0,-733.772:592:291:301:11099:10532:291,301	.	.	0/1:-560.837,0,-510.955:406:197:209:7917:7299	.	.	0/1:-474.405,0,-611.121:411:227:184:6973:8512	.	.	.
+chr1	201336984	.	C	T	5378.38	.	AB=0;ABP=0;AC=31;AF=1;AN=48;AO=384;CIGAR=1X;DP=7651;DPB=384;DPRA=0;EPP=194.462;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=0;NS=1;NUMALT=1;ODDS=536.942;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=13847;QR=0;RO=0;RPL=263;RPP=117.035;RPPR=0;RPR=121;RUN=1;SAF=163;SAP=22.0333;SAR=221;SF=0,1,2,3,4,6,7,8,9,12,14,16,17,18,19,20,23,24,25,27,28,29,34,35;SRF=0;SRP=0;SRR=0;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	1/1:-1202.59,-115.596,0:384:0:384:13847:0:0,384	0/1:-189.79,0,-170.425:141:67:74:2675:2462	0/1:-437.547,0,-386.85:336:158:177:6193:5636	0/1:-449.875,0,-368.935:325:149:174:6329:5369:149,174	1/1:-1070.05,-103.554,0:345:0:344:12338:0	.	1/1:-757.85,-72.3248,0:254:2:251:8768:43:2,251	0/1:-534.474,0,-459.204:399:187:211:7564:6679	1/1:-730.538,-72.5482,0:243:0:241:8423:0	0/1:-414.182,0,-371.259:313:148:165:5842:5358:148,165	.	.	0/1:-577.847,0,-610.943:474:239:235:8290:8700:239,235	.	0/1:-327.301,0,-250.776:235:103:132:4582:3692	.	0/1:-387.232,0,-412.716:327:166:159:5583:5878:166,159	0/1:-294.002,0,-395.45:274:153:121:4333:5499	0/1:-205.159,0,-330.409:213:125:88:3094:4537	0/1:-512.046,0,-501.19:406:198:207:7299:7171	0/1:-477.991,0,-363.85:335:149:186:6666:5369:149,186	.	.	0/1:-450.108,0,-410.32:347:163:182:6372:5916	0/1:-225.833,0,-215.319:174:85:89:3192:3079:85,89	0/1:-566.33,0,-611.825:489:247:238:8198:8719:247,238	.	0/1:-464.901,0,-518.913:408:208:196:6741:7368:208,196	1/1:-603.75,-61.1875,0:216:3:211:6967:36	1/1:-1403.15,-143.265,0:491:1:486:16257:38	.	.	.	.	1/1:-1015.13,-96.8764,0:327:1:325:11698:14	0/1:-200.176,0,-298.286:195:112:83:2972:4110	.
+chr1	201338553	.	T	C	153.04	.	AB=0;ABP=0;AC=51;AF=1;AN=58;AO=5;CIGAR=1X;DP=219;DPB=5;DPRA=0;EPP=3.44459;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=0;NS=1;NUMALT=1;ODDS=11.5366;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=180;QR=0;RO=0;RPL=2;RPP=3.44459;RPPR=0;RPR=3;RUN=1;SAF=5;SAP=13.8677;SAR=0;SF=0,1,2,3,4,6,7,8,9,11,12,14,15,17,18,19,20,23,25,27,28,29,30,31,32,33,34,35,36;SRF=0;SRP=0;SRR=0;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	1/1:-16.0572,-1.50515,0:5:0:5:180:0:0,5	1/1:-6.62351,-0.60206,0:2:0:2:72:0	1/1:-20.2169,-2.10721,0:7:0:7:227:0	0/1:-9.27097,0,-11.109:8:4:4:131:152:4,4	1/1:-23.1217,-2.10721,0:7:0:7:263:0	.	1/1:-16.2462,-1.50515,0:5:0:5:182:0:0,5	0/1:-10.6017,0,-30.9053:17:12:5:177:409	1/1:-14.6919,-1.50515,0:5:0:5:165:0	1/1:-35.9446,-3.31133,0:11:0:11:411:0:0,11	.	0/1:-26.799,0,-9.09231:15:5:10:357:151	1/1:-21.3164,-2.10721,0:7:0:7:239:0:0,7	.	1/1:-21.7829,-2.40824,0:8:0:8:245:0	1/1:-20.4164,-1.80618,0:6:0:6:233:0	.	1/1:-24.9754,-2.40824,0:8:0:8:284:0	0/1:-5.50401,0,-8.72302:5:3:2:77:114	1/1:-23.6371,-2.10721,0:7:0:7:270:0	1/1:-29.8976,-2.70927,0:9:0:9:342:0:0,9	.	.	1/1:-16.7302,-1.50515,0:5:0:5:189:0	.	1/1:-32.9194,-3.0103,0:10:0:10:376:0:0,10	.	1/1:-50.3716,-4.81648,0:16:0:16:577:0:0,16	1/1:-14.375,-1.80618,0:6:0:6:161:0	1/1:-51.7268,-5.41854,0:18:0:18:613:0	1/1:-6.80331,-0.60206,0:2:0:2:74:0	0/1:-17.4394,0,-3.94128:9:2:6:227:71	0/1:-8.18983,0,-10.8941:7:4:3:115:145	1/1:-16.1717,-1.50515,0:5:0:5:182:0	1/1:-9.78478,-0.90309,0:3:0:3:108:0	1/1:-6.79932,-0.60206,0:2:0:2:74:0	0/1:-7.14533,0,-2.45036:4:1:3:93:38
+chr1	201338896	.	T	C	6114.46	.	AB=0;ABP=0;AC=51;AF=1;AN=68;AO=296;CIGAR=1X;DP=9498;DPB=296;DPRA=0;EPP=3.0103;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=41.973;MQMR=0;NS=1;NUMALT=1;ODDS=414.948;PAIRED=0.989865;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=10950;QR=0;RO=0;RPL=106;RPP=54.7735;RPPR=0;RPR=190;RUN=1;SAF=158;SAP=5.94472;SAR=138;SF=0,1,2,3,4,5,6,7,8,9,10,12,13,14,15,16,17,18,19,20,21,22,23,24,25,26,27,28,29,30,31,33,34,35;SRF=0;SRP=0;SRR=0;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	1/1:-949.72,-89.1049,0:296:0:296:10950:0:0,296	1/1:-346.011,-31.9092,0:106:0:106:3994:0	1/1:-1010.84,-97.8348,0:326:0:325:11699:0	0/1:-250.539,0,-414.532:259:154:104:3809:5736:154,104	1/1:-1181.09,-112.585,0:375:0:374:13641:0	0/1:-524.498,0,-377.029:354:152:202:7286:5591:152,202	1/1:-798.787,-76.1606,0:253:0:253:9233:0:0,253	0/1:-608.034,0,-517.93:444:206:236:8540:7548	1/1:-802.289,-76.7627,0:256:0:255:9262:0	1/1:-752.245,-71.3441,0:239:0:237:8691:0:0,237	0/1:-422.139,0,-330.341:288:128:160:5880:4829:128,160	.	1/1:-1331.1,-127.035,0:422:0:422:15361:0:0,422	0/1:-375.748,0,-430.624:318:166:152:5458:6126	1/1:-723.745,-66.6689,0:233:1:231:8372:35	0/1:-467.676,0,-352.776:314:138:176:6487:5174	0/1:-328.033,0,-360.069:264:137:127:4700:5099:137,127	1/1:-971.631,-92.4162,0:308:0:307:11232:0	0/1:-232.92,0,-230.729:178:87:91:3302:3286	1/1:-846.61,-80.9771,0:269:0:269:9773:0	0/1:-406.077,0,-498.901:355:192:163:5952:7033:192,163	0/1:-61.7377,0,-253.48:127:95:32:1156:3355:95,32	0/1:-162.488,0,-177.242:135:70:65:2336:2521	0/1:-503.058,0,-409.632:352:161:190:7050:5966	0/1:-183.574,0,-220.946:156:85:71:2656:3107:85,71	1/1:-1222.13,-118.606,0:396:0:394:14148:0:0,394	0/1:-395.6,0,-451.444:345:181:164:5753:6411	1/1:-1098.95,-103.855,0:345:0:345:12669:0:0,345	1/1:-739.955,-72.8493,0:242:0:242:8514:0	1/1:-1203.31,-114.639,0:403:2:400:14006:71	0/1:-318.037,0,-309.302:246:120:126:4514:4429	0/1:-321.741,0,-235.762:221:96:125:4470:3480	.	0/1:-387.935,0,-339.773:278:131:147:5432:4898	1/1:-801.687,-76.7627,0:255:0:255:9271:0	1/1:-436.469,-42.1442,0:140:0:140:5027:0	.
+chr1	201339043	.	C	T,A	4639.42	.	AB=0;ABP=0;AC=51,1;AF=1;AN=68;AO=209;CIGAR=1X;DP=7804;DPB=210;DPRA=0;EPP=24.0497;EPPR=5.18177;GTI=0;LEN=1;MEANALT=1;MQM=41.9809;MQMR=42;NS=1;NUMALT=1;ODDS=289.237;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=7367;QR=14;RO=1;RPL=178;RPP=227.524;RPPR=5.18177;RPR=31;RUN=1;SAF=96;SAP=6.01296;SAR=113;SF=0,1,2,3,4,5,6,7,8,9,10,12,13,14,15,16,17,18,19,20,21,22,23,24,25,26,27,28,29,30,31,33,34,35;SRF=1;SRP=5.18177;SRR=0;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	1/1:-639.823,-61.817,0,.,.,.:210:1:209,.:7367,.:14:1,209	1/1:-299.342,-28.4026,0,.,.,.:99:1:98,.:3485,.:14	1/1:-714.671,-69.5321,0,.,.,.:242:2:236,.:8259,.:24	2/1:-631.607,-324.954,-292.443,-306.855,0,-271.634:226:0:108,117:3903,4151:0:0,117,108	1/1:-827.89,-80.074,0,.,.,.:267:0:266,.:9573,.:0	0/1:-420.128,0,-364.308,.,.,.:313:149:163,.:5934,.:5271:149,163	1/1:-636.927,-62.9153,0,.,.,.:210:0:209,.:7332,.:0:0,209	0/1:-370.637,0,-364.242,.,.,.:298:145:152,.:5326,.:5244	1/1:-652.768,-63.2163,0,.,.,.:212:0:210,.:7542,.:0	1/1:-610.407,-60.4451,0,.,.,.:207:1:204,.:7122,.:14:1,204	0/1:-274.291,0,-227.645,.,.,.:207:94:113,.:3922,.:3329:94,113	.	1/1:-1029.28,-96.9477,0,.,.,.:335:1:332,.:11891,.:37:1,332	0/1:-241.886,0,-384.035,.,.,.:253:145:106,.:3672,.:5290	1/1:-573.048,-55.0885,0,.,.,.:183:0:183,.:6592,.:0	0/1:-299.672,0,-381.893,.,.,.:279:154:124,.:4426,.:5344	0/1:-300.302,0,-276.517,.,.,.:232:109:120,.:4273,.:3987:109,120	1/1:-798.873,-77.2274,0,.,.,.:261:1:259,.:9230,.:12	0/1:-146.28,0,-183.476,.,.,.:143:77:65,.:2165,.:2593	1/1:-734.373,-71.2855,0,.,.,.:243:1:240,.:8497,.:14	0/1:-386.031,0,-357.922,.,.,.:303:144:157,.:5496,.:5169:144,157	0/1:-36.8301,0,-243.169,.,.,.:118:93:25,.:825,.:3193:93,25	0/1:-109.943,0,-152.603,.,.,.:114:63:49,.:1663,.:2149	0/1:-376.932,0,-336.966,.,.,.:291:138:152,.:5356,.:4867	0/1:-103.345,0,-181.755,.,.,.:117:70:45,.:1583,.:2487:70,45	1/1:-952.514,-94.5053,0,.,.,.:319:1:317,.:11045,.:14:1,317	0/1:-330.55,0,-374.466,.,.,.:306:160:144,.:4857,.:5364	1/1:-866.914,-86.5512,0,.,.,.:294:1:290,.:9989,.:12:1,290	1/1:-553.195,-53.7661,0,.,.,.:191:2:185,.:6415,.:28	1/1:-1166.67,-116.125,0,.,.,.:405:2:399,.:13639,.:52	0/1:-229.606,0,-289.402,.,.,.:215:115:95,.:3364,.:4043	0/1:-220.07,0,-206.237,.,.,.:180:88:92,.:3140,.:2982	.	0/1:-196.68,0,-254.338,.,.,.:186:101:84,.:2902,.:3614	1/1:-690.237,-68.0328,0,.,.,.:228:0:226,.:7948,.:0	1/1:-356.699,-35.2205,0,.,.,.:117:0:117,.:4100,.:0	.
+chr1	201339044	.	G	A	2150.24	.	AB=0.488136;ABP=3.37099;AC=6;AF=0.5;AN=12;AO=144;CIGAR=1X;DP=1120;DPB=295;DPRA=0;EPP=3.25157;EPPR=3.02487;GTI=0;LEN=1;MEANALT=3;MQM=41.7361;MQMR=41.2752;NS=1;NUMALT=1;ODDS=759.691;PAIRED=0.993056;PAIREDR=0.993289;PAO=0;PQA=0;PQR=0;PRO=0;QA=5175;QR=5389;RO=149;RPL=128;RPP=192.17;RPPR=238.069;RPR=16;RUN=1;SAF=58;SAP=14.8328;SAR=86;SF=7,13,16,21,22,24;SRF=63;SRP=10.7198;SRR=86;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	0/1:-359.352,0,-374.704:295:149:144:5175:5389	.	.	.	.	.	0/1:-378.301,0,-256.032:249:106:143:5213:3846	.	.	0/1:-271.351,0,-313.526:231:123:108:3927:4445:123,108	.	.	.	.	0/1:-67.9154,0,-218.602:117:82:35:1181:2916:82,35	0/1:-154.54,0,-114.362:112:48:64:2182:1725	.	0/1:-182.649,0,-103.864:116:45:71:2499:1595:45,71	.	.	.	.	.	.	.	.	.	.	.	.
+chr1	201341175	.	CAGAAGAGAAGT	CAGAAGT	8779.15	.	AB=0;ABP=0;AC=51;AF=1;AN=68;AO=440;CIGAR=1M5D6M;DP=15498;DPB=269.583;DPRA=0;EPP=4.60929;EPPR=0;GTI=0;LEN=5;MEANALT=8;MQM=40.4205;MQMR=0;NS=1;NUMALT=1;ODDS=614.575;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=15091;QR=0;RO=0;RPL=131;RPP=159.376;RPPR=0;RPR=309;RUN=1;SAF=268;SAP=48.4928;SAR=172;SF=0,1,2,3,4,5,6,7,8,9,10,12,13,14,15,16,17,18,19,20,21,22,23,24,25,26,27,28,29,30,31,33,34,35;SRF=0;SRP=0;SRR=0;TYPE=del	GT:GL:DP:RO:AO:QA:QR:AD	1/1:-1300.49,-132.453,0:455:0:440:15091:0:0,440	1/1:-607.245,-68.6348,0:203:0:201:7075:0	1/1:-1278.64,-155.331,0:478:0:458:14789:0	0/1:-530.416,0,-578.222:451:219:222:7719:8221:219,222	1/1:-1377.06,-165.868,0:483:0:472:15869:0	0/1:-684.332,0,-657.117:551:257:285:9886:9526:257,285	1/1:-1132.39,-112.585,0:375:0:374:13146:0:0,374	0/1:-677.474,0,-986.192:711:364:329:10806:13451	1/1:-1087.94,-123.121,0:375:0:367:12710:0	1/1:-1190.73,-121.315,0:415:0:403:13853:0:0,403	0/1:-447.36,0,-663.413:463:248:195:6774:9194:248,195	.	1/1:-1785.12,-180.618,0:614:0:600:20841:0:0,600	0/1:-578.437,0,-550.879:488:216:254:8589:7923	1/1:-1083.78,-121.656,0:377:1:372:12640:30	0/1:-611.631,0,-643.443:524:244:265:9194:9082	0/1:-595.049,0,-738.749:552:277:258:8843:10391:277,258	1/1:-1604.72,-189.348,0:552:0:541:18645:0	0/1:-306.07,0,-446.166:312:163:141:4814:5979	1/1:-1412.72,-165.901,0:504:2:489:16588:76	0/1:-617.798,0,-761.661:571:287:268:9162:10756:287,268	0/1:-102.188,0,-497.06:255:181:62:2006:6556:181,62	0/1:-285.472,0,-319.912:265:120:132:4309:4325	0/1:-628.632,0,-782.231:554:279:272:9483:10507	0/1:-313.459,0,-323.287:259:125:133:4525:4615:125,133	1/1:-1904.74,-198.68,0:674:0:660:22109:0:0,660	0/1:-512.591,0,-732.805:554:279:255:8017:10133	1/1:-1708.41,-176.705,0:599:0:587:19826:0:0,587	1/1:-915.692,-110.478,0:332:0:323:10681:0	1/1:-1844.43,-224.693,0:666:1:648:21195:29	0/1:-512.059,0,-598.076:444:210:227:7738:7789	0/1:-303.597,0,-433.746:325:165:148:4842:6076	.	0/1:-506.972,0,-521.812:422:198:215:7579:7269	1/1:-1282.28,-149.612,0:442:0:437:14853:0	1/1:-744.382,-89.4059,0:253:0:247:8573:0	.
+chr1	201341260	.	C	T	9209.62	.	AB=0.474227;ABP=7.48756;AC=1;AF=0.5;AN=2;AO=368;CIGAR=1X;DP=776;DPB=776;DPRA=0;EPP=93.7401;EPPR=33.903;GTI=0;LEN=1;MEANALT=3;MQM=41.3505;MQMR=41.2808;NS=1;NUMALT=1;ODDS=2120.59;PAIRED=0.986413;PAIREDR=0.997537;PAO=0;PQA=0;PQR=0;PRO=0;QA=13661;QR=14552;RO=406;RPL=182;RPP=3.10471;RPPR=4.3795;RPR=186;RUN=1;SAF=170;SAP=7.63648;SAR=198;SF=5;SRF=184;SRP=10.7335;SRR=222;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	0/1:-938.752,0,-1027.8:776:406:368:13661:14552:406,368	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr1	201341341	.	C	T	7946.56	.	AB=0;ABP=0;AC=60;AF=1;AN=74;AO=342;CIGAR=1X;DP=13000;DPB=342;DPRA=0;EPP=4.25477;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=41.924;MQMR=0;NS=1;NUMALT=1;ODDS=478.718;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=12252;QR=0;RO=0;RPL=257;RPP=190.849;RPPR=0;RPR=85;RUN=1;SAF=105;SAP=113.641;SAR=237;SF=0,1,2,3,4,5,6,7,8,9,10,11,12,13,14,15,16,17,18,19,20,21,22,23,24,25,26,27,28,29,30,31,32,33,34,35,36;SRF=0;SRP=0;SRR=0;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	1/1:-1063.23,-102.952,0:342:0:342:12252:0:0,342	1/1:-481.912,-45.7566,0:152:0:152:5557:0	1/1:-1174.49,-113.696,0:383:1:382:13614:16	1/1:-1055.22,-101.146,0:337:0:336:12218:0:0,336	1/1:-1307.42,-124.024,0:413:0:412:15115:0	0/1:-514.355,0,-567.061:435:224:210:7434:8050:224,210	1/1:-960.466,-91.9519,0:311:1:308:11085:12:1,308	0/1:-555.151,0,-688.345:501:269:230:8223:9651	1/1:-908.804,-79.0631,0:291:3:288:10598:93	1/1:-935.719,-88.5689,0:300:1:298:10854:16:1,298	0/1:-355.79,0,-498.686:339:192:147:5294:6933:192,147	0/1:-587.865,0,-506.587:440:207:233:8299:7344	1/1:-1739.73,-168.009,0:564:1:561:20142:13:1,561	0/1:-543.441,0,-535.971:427:214:211:7774:7633	1/1:-777.199,-74.3544,0:247:0:247:8962:0	1/1:-1144.62,-111.039,0:376:1:372:13226:14	0/1:-556.353,0,-450.446:401:184:217:7808:6603:184,217	1/1:-1401.77,-132.79,0:445:1:444:16256:12	0/1:-277.784,0,-385.515:259:146:113:4099:5317	1/1:-1108.52,-107.167,0:359:0:356:12823:0	1/1:-1365.56,-123.468,0:443:3:438:15937:105:3,438	0/1:-96.7132,0,-340.411:179:130:49:1722:4521:130,49	0/1:-214.113,0,-200.448:172:83:89:3045:2883	1/1:-1121.66,-107.167,0:358:0:356:12949:0	0/1:-258.115,0,-279.512:209:109:100:3700:3926:109,100	1/1:-1495.82,-144.753,0:493:1:492:17341:38:1,492	0/1:-423.14,0,-642.948:438:252:184:6369:8908	1/1:-1241.28,-120.412,0:403:0:400:14351:0:0,400	1/1:-810.447,-79.1709,0:264:0:263:9344:0	1/1:-1501.08,-148.709,0:496:0:494:17378:0	1/1:-929.498,-89.7069,0:298:0:298:10718:0	0/1:-268.658,0,-315.353:233:123:110:3894:4446	0/1:-427.458,0,-474.688:360:187:172:6190:6696	1/1:-963.11,-91.2181,0:308:1:307:11178:15	1/1:-1081.06,-103.554,0:345:0:344:12482:0	1/1:-683.525,-65.0225,0:216:0:216:7873:0	0/1:-600.63,0,-568.574:463:225:237:8532:8132
+chr1	201342385	.	T	C	4946.82	.	AB=0.461369;ABP=8.88238;AC=1;AF=0.5;AN=2;AO=209;CIGAR=1X;DP=453;DPB=453;DPRA=0;EPP=12.9949;EPPR=10.5879;GTI=0;LEN=1;MEANALT=3;MQM=41.622;MQMR=41.5851;NS=1;NUMALT=1;ODDS=1139.05;PAIRED=0.980861;PAIREDR=0.983402;PAO=0;PQA=0;PQR=0;PRO=0;QA=7427;QR=8591;RO=241;RPL=75;RPP=39.1773;RPPR=62.1266;RPR=134;RUN=1;SAF=102;SAP=3.27005;SAR=107;SF=2;SRF=114;SRP=4.53303;SRR=127;TYPE=snp	GT:GL:DP:RO:AO:QA:QR	.	.	0/1:-507.048,0,-603.94:453:241:209:7427:8591	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr1	227069677	.	T	C	7962.66	.	AB=0.44186;ABP=13.1102;AC=58;AF=0.5;AN=72;AO=152;CIGAR=1X;DP=12360;DPB=344;DPRA=0;EPP=4.4389;EPPR=10.6557;GTI=0;LEN=1;MEANALT=1;MQM=41.9737;MQMR=41.9792;NS=1;NUMALT=1;ODDS=846.599;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=5507;QR=7101;RO=192;RPL=78;RPP=3.23888;RPPR=5.9056;RPR=74;RUN=1;SAF=77;SAP=3.06744;SAR=75;SF=0,1,2,3,4,5,6,7,8,9,10,11,12,13,14,15,16,17,18,19,20,21,22,23,25,26,27,28,29,30,31,32,33,34,35,36;SRF=101;SRP=4.14128;SRR=91;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	0/1:-375.789,0,-512.279:344:192:152:5507:7101:192,152	1/1:-421.613,-40.037,0:133:0:133:4851:0	1/1:-1101.08,-108.341,0:365:1:363:12776:14	0/1:-501.442,0,-390.993:345:154:191:6976:5726:154,191	0/1:-575.355,0,-536.071:438:210:227:8140:7703	0/1:-468.228,0,-687.868:454:260:194:6996:9562:260,194	1/1:-776.358,-71.368,0:249:1:247:8956:37:1,247	0/1:-547.808,0,-730.427:502:277:225:8069:10235	0/1:-374.208,0,-361.591:288:139:149:5312:5177	0/1:-406.624,0,-486.511:347:187:160:5875:6813:187,160	0/1:-396.443,0,-526.561:362:200:161:5811:7341:200,161	1/1:-1227.52,-118.606,0:394:0:394:14137:0	1/1:-1574.49,-145.887,0:510:3:507:18276:83:3,507	1/1:-1058.34,-104.758,0:348:0:348:12170:0	1/1:-771.078,-73.4513,0:244:0:244:8886:0	1/1:-1321.66,-129.142,0:429:0:429:15257:0	1/1:-1182.13,-112.585,0:374:0:374:13612:0:0,374	0/1:-564.308,0,-609.049:462:235:223:8084:8629	1/1:-710.084,-68.6348,0:228:0:228:8158:0	1/1:-1104.72,-104.563,0:355:1:354:12747:30	1/1:-1436,-137.571,0:460:0:457:16595:0:0,457	0/1:-279.599,0,-74.7335:146:38:108:3715:1364:38,108	1/1:-418.269,-42.4452,0:141:0:141:4843:0	1/1:-1315.65,-126.734,0:421:0:421:15138:0	.	1/1:-1474.8,-144.193,0:480:0:479:16985:0:0,479	1/1:-1189.54,-116.198,0:386:0:386:13699:0	1/1:-1341.75,-130.948,0:435:0:435:15471:0:0,435	1/1:-678.75,-65.6245,0:218:0:218:7804:0	1/1:-1416.37,-140.28,0:466:0:466:16328:0	1/1:-900.925,-86.0946,0:286:0:286:10423:0	0/1:-213.214,0,-301.598:203:113:90:3142:4183	1/1:-1071.06,-102.049,0:340:0:339:12350:0	0/1:-372.632,0,-361.968:290:141:148:5308:5178	0/1:-368.214,0,-420.504:308:161:147:5298:5947	1/1:-464.999,-44.8535,0:149:0:149:5346:0	0/1:-503.406,0,-658.881:460:249:208:7377:9211
+chr1	227069737	.	C	T	4555.40	.	AB=0;ABP=0;AC=51;AF=1;AN=66;AO=86;CIGAR=1X;DP=7148;DPB=86;DPRA=0;EPP=3.41429;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=41.9767;MQMR=0;NS=1;NUMALT=1;ODDS=123.826;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=3189;QR=0;RO=0;RPL=80;RPP=141.278;RPPR=0;RPR=6;RUN=1;SAF=35;SAP=9.47422;SAR=51;SF=1,2,4,5,6,7,8,9,10,11,12,13,14,15,16,18,19,20,21,22,23,25,26,27,28,29,30,31,32,33,34,35,36;SRF=0;SRP=0;SRR=0;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	1/1:-276.067,-25.8886,0:86:0:86:3189:0	1/1:-677.449,-66.8287,0:222:0:222:7891:0	.	0/1:-358.838,0,-415.213:300:157:141:5200:5861	0/1:-325.325,0,-373.95:273:144:129:4741:5304:144,129	1/1:-524.036,-49.971,0:166:0:166:6043:0:0,166	0/1:-407.522,0,-461.158:340:178:162:5921:6590	0/1:-226.63,0,-227.174:172:85:87:3213:3223	0/1:-196.39,0,-341.5:206:125:81:2982:4661:125,81	0/1:-232.798,0,-408.344:251:152:98:3546:5589:152,98	1/1:-872.322,-85.4925,0:285:0:284:10081:0	1/1:-939.075,-88.9808,0:300:1:298:10857:12:1,298	1/1:-728.782,-68.9419,0:234:1:233:8439:15	1/1:-500.224,-47.2617,0:158:0:157:5794:0	1/1:-808.036,-78.5688,0:261:0:261:9356:0	1/1:-719.923,-67.5369,0:229:1:228:8337:14:1,228	.	1/1:-429.918,-40.9401,0:136:0:136:4951:0	1/1:-618.319,-58.0988,0:193:0:193:7151:0	1/1:-847.827,-82.4822,0:275:0:274:9889:0:0,274	0/1:-33.8005,0,-220.9:99:79:20:727:2891:79,20	0/1:-106.072,0,-123.281:94:49:45:1588:1765	1/1:-779.444,-73.7524,0:245:0:245:9016:0	.	1/1:-977.963,-93.3193,0:311:0:310:11369:0:0,310	1/1:-777.974,-71.8621,0:261:2:259:9093:73	0/1:-357.634,0,-420.429:303:163:140:5181:5975:163,140	0/1:-175.448,0,-180.394:143:72:71:2514:2574	1/1:-898.396,-88.5028,0:294:0:294:10406:0	0/1:-227.315,0,-239.484:185:96:89:3265:3440	0/1:-164.106,0,-194.501:140:74:66:2372:2730	1/1:-633.05,-61.1091,0:204:0:203:7328:0	0/1:-246.65,0,-232.399:184:89:95:3483:3326	0/1:-282.407,0,-241.841:203:94:109:3957:3497	1/1:-305.547,-28.8989,0:96:0:96:3522:0	0/1:-328.969,0,-444.193:299:166:132:4848:6192
+chr1	227071449	.	G	A	4607.69	.	AB=0.4375;ABP=18.2106;AC=1;AF=0.5;AN=2;AO=196;CIGAR=1X;DP=448;DPB=448;DPRA=0;EPP=5.18177;EPPR=6.45708;GTI=0;LEN=1;MEANALT=1;MQM=41.8878;MQMR=41.8413;NS=1;NUMALT=1;ODDS=1060.96;PAIRED=0.97449;PAIREDR=0.992063;PAO=0;PQA=0;PQR=0;PRO=0;QA=7083;QR=9179;RO=252;RPL=53;RPP=92.7497;RPPR=47.6806;RPR=143;RUN=1;SAF=90;SAP=5.84651;SAR=106;SF=3;SRF=120;SRP=4.25114;SRR=132;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	0/1:-479.215,0,-659.531:448:252:196:7083:9179:252,196	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr1	227071472	.	G	A	7495.94	.	AB=0.492635;ABP=3.29817;AC=1;AF=0.5;AN=2;AO=301;CIGAR=1X;DP=611;DPB=611;DPRA=0;EPP=50.3426;EPPR=39.3229;GTI=0;LEN=1;MEANALT=1;MQM=41.5216;MQMR=41.9742;NS=1;NUMALT=1;ODDS=1726;PAIRED=0.986711;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=10978;QR=11224;RO=310;RPL=126;RPP=20.3316;RPPR=43.4697;RPR=175;RUN=1;SAF=142;SAP=5.0952;SAR=159;SF=5;SRF=136;SRP=13.1252;SRR=174;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	0/1:-763.845,0,-791.72:611:310:301:10978:11224:310,301	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr1	227071475	.	C	T	6308.74	.	AB=0.463497;ABP=9.82703;AC=1;AF=0.5;AN=2;AO=273;CIGAR=1X;DP=589;DPB=589;DPRA=0;EPP=17.7175;EPPR=46.033;GTI=0;LEN=1;MEANALT=2;MQM=41.6264;MQMR=41.5556;NS=1;NUMALT=1;ODDS=1452.64;PAIRED=0.989011;PAIREDR=0.987302;PAO=0;PQA=0;PQR=0;PRO=0;QA=9459;QR=11389;RO=315;RPL=107;RPP=30.6986;RPPR=30.3709;RPR=166;RUN=1;SAF=122;SAP=9.69971;SAR=151;SF=17;SRF=146;SRP=6.65699;SRR=169;TYPE=snp	GT:GL:DP:RO:AO:QA:QR	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-643.877,0,-807.426:589:315:273:9459:11389	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr1	227071525	.	C	T	9384.85	.	AB=0;ABP=0;AC=51;AF=1;AN=66;AO=158;CIGAR=1X;DP=13963;DPB=158;DPRA=0;EPP=6.52863;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=41.7405;MQMR=0;NS=1;NUMALT=1;ODDS=223.64;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=5774;QR=0;RO=0;RPL=116;RPP=78.2697;RPPR=0;RPR=42;RUN=1;SAF=55;SAP=34.6753;SAR=103;SF=1,2,4,5,6,7,8,9,10,11,12,13,14,15,16,18,19,20,21,22,23,25,26,27,28,29,30,31,32,33,34,35,36;SRF=0;SRP=0;SRR=0;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	1/1:-496.06,-47.5627,0:158:0:158:5774:0	1/1:-1389.14,-133.958,0:448:0:445:16107:0	.	0/1:-558.036,0,-774.024:530:303:227:8316:10785	0/1:-696.672,0,-634.376:518:249:267:9912:9106:249,267	1/1:-1166.98,-107.098,0:365:1:362:13537:24:1,362	0/1:-564.497,0,-876.296:573:336:235:8621:12104	0/1:-644.735,0,-508.441:454:206:247:9079:7470	0/1:-411.645,0,-540.167:379:210:168:6068:7532:210,168	0/1:-539.586,0,-577.647:438:225:212:7847:8188:225,212	1/1:-1566.38,-150.628,0:506:2:503:18193:73	1/1:-1830.43,-175.5,0:585:0:583:21276:0:0,583	1/1:-1294.88,-124.024,0:415:0:412:15056:0	1/1:-1078.56,-101.748,0:340:0:338:12499:0	1/1:-1440.79,-136.819,0:460:1:458:16788:15	1/1:-1315.55,-124.626,0:416:0:414:15284:0:0,414	.	1/1:-814.021,-77.0637,0:257:0:256:9419:0	1/1:-1646.93,-158.342,0:527:0:526:19119:0	1/1:-1644.3,-150.425,0:530:3:523:19244:91:3,523	0/1:-161.11,0,-474.146:257:179:76:2759:6327:179,76	0/1:-384.904,0,-272.025:267:115:151:5397:4050	1/1:-1536.97,-145.699,0:485:0:484:17847:0	.	1/1:-1872.52,-177.909,0:592:0:591:21708:0:0,591	1/1:-1469.13,-144.494,0:484:0:480:17000:0	0/1:-624.827,0,-631.748:505:258:246:8997:9039:258,246	0/1:-350.265,0,-318.109:276:135:140:5039:4617	1/1:-1749.48,-169.459,0:567:1:564:20347:14	0/1:-636.023,0,-489.135:437:193:243:8890:7154	0/1:-450.538,0,-355.257:318:148:170:6315:5190	1/1:-1395.81,-134.259,0:446:0:446:16180:0	0/1:-421.383,0,-609.126:403:232:170:6294:8438	0/1:-467.236,0,-478.243:367:185:181:6682:6790	1/1:-720.671,-68.0328,0:226:0:226:8368:0	0/1:-527.894,0,-553.072:434:217:215:7677:7975
+chr1	227075813	.	A	G	5145.76	.	AB=0.477064;ABP=5.00248;AC=1;AF=0.5;AN=2;AO=208;CIGAR=1X;DP=436;DPB=436;DPRA=0;EPP=3.38613;EPPR=6.46361;GTI=0;LEN=1;MEANALT=2;MQM=41.6827;MQMR=41.8282;NS=1;NUMALT=1;ODDS=1184.85;PAIRED=0.985577;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=7522;QR=8419;RO=227;RPL=106;RPP=3.17734;RPPR=14.7286;RPR=102;RUN=1;SAF=107;SAP=3.38613;SAR=101;SF=27;SRF=111;SRP=3.24945;SRR=116;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-521.134,0,-597.055:436:227:208:7522:8419:227,208	.	.	.	.	.	.	.	.	.
+chr1	227076671	.	T	C	9018.66	.	AB=0.497214;ABP=3.05869;AC=1;AF=0.5;AN=2;AO=357;CIGAR=1X;DP=718;DPB=718;DPRA=0;EPP=3.06504;EPPR=3.16236;GTI=0;LEN=1;MEANALT=2;MQM=41.7227;MQMR=41.8992;NS=1;NUMALT=1;ODDS=1982.18;PAIRED=0.994398;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=13073;QR=12530;RO=357;RPL=231;RPP=70.0705;RPPR=67.5401;RPR=126;RUN=1;SAF=163;SAP=8.85564;SAR=194;SF=14;SRF=163;SRP=8.85564;SRR=194;TYPE=snp	GT:GL:DP:RO:AO:QA:QR	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-916.891,0,-875.625:718:357:357:13073:12530	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr1	227076757	.	G	A	3808.17	.	AB=0.49835;ABP=3.01747;AC=1;AF=0.5;AN=2;AO=151;CIGAR=1X;DP=303;DPB=303;DPRA=0;EPP=22.6974;EPPR=35.9253;GTI=0;LEN=1;MEANALT=1;MQM=41.7483;MQMR=41.8487;NS=1;NUMALT=1;ODDS=862.828;PAIRED=0.993377;PAIREDR=0.986842;PAO=0;PQA=0;PQR=0;PRO=0;QA=5683;QR=5600;RO=152;RPL=110;RPP=71.4764;RPPR=65.2401;RPR=41;RUN=1;SAF=59;SAP=18.6708;SAR=92;SF=6;SRF=61;SRP=15.8677;SRR=91;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	0/1:-398.322,0,-392.632:303:152:151:5683:5600:152,151	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr1	227078955	.	T	C	3263.36	.	AB=0.522936;ABP=3.50834;AC=58;AF=0.5;AN=72;AO=57;CIGAR=1X;DP=4842;DPB=109;DPRA=0;EPP=3.0484;EPPR=9.02361;GTI=0;LEN=1;MEANALT=1;MQM=41.6667;MQMR=41.6346;NS=1;NUMALT=1;ODDS=275.501;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2062;QR=1890;RO=52;RPL=12;RPP=44.4969;RPPR=45.7716;RPR=45;RUN=1;SAF=36;SAP=11.5819;SAR=21;SF=0,1,2,3,4,5,6,7,8,9,10,11,12,13,14,15,16,17,18,19,20,21,22,23,25,26,27,28,29,30,31,32,33,34,35,36;SRF=26;SRP=3.0103;SRR=26;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	0/1:-146.067,0,-130.781:109:52:57:2062:1890:52,57	1/1:-168.481,-15.6536,0:53:0:52:1949:0	1/1:-446.566,-41.8432,0:139:0:139:5170:0	0/1:-195.378,0,-182.907:145:69:76:2763:2619:69,76	0/1:-214.982,0,-225.354:168:86:81:3073:3209	0/1:-160.349,0,-205.554:141:77:64:2342:2866:77,64	1/1:-379.096,-34.9195,0:116:0:116:4381:0:0,116	0/1:-271.774,0,-268.899:206:102:103:3859:3825	0/1:-144.22,0,-153.837:115:59:56:2067:2176	0/1:-143.077,0,-109.41:96:43:53:1986:1597:43,53	0/1:-157.803,0,-168.965:131:67:64:2316:2403:67,64	1/1:-525.435,-49.3689,0:166:0:164:6119:0	1/1:-701.822,-65.3235,0:218:0:217:8155:0:0,217	1/1:-495.778,-46.6597,0:156:0:155:5727:0	1/1:-374.583,-34.9195,0:116:0:116:4362:0	1/1:-478.84,-46.0576,0:153:0:153:5558:0	1/1:-334.492,-31.0061,0:103:0:103:3870:0:0,103	0/1:-219.913,0,-173.086:157:72:84:3101:2543	1/1:-326.257,-29.4072,0:103:1:102:3821:16	1/1:-433.667,-41.2411,0:137:0:137:5068:0	1/1:-673.135,-62.3132,0:208:0:207:7799:0:0,207	0/1:-120.665,0,-29.0258:58:15:43:1592:531:15,43	1/1:-178.362,-16.8577,0:56:0:56:2054:0	1/1:-468.613,-43.0473,0:143:0:143:5422:0	.	1/1:-773.956,-72.5482,0:243:0:241:8983:0:0,241	1/1:-481.533,-45.4555,0:151:0:151:5564:0	1/1:-580.283,-55.3895,0:184:0:184:6760:0:0,184	1/1:-339.791,-33.1133,0:110:0:110:3919:0	1/1:-717.554,-68.0328,0:226:0:226:8305:0	1/1:-353.164,-33.1133,0:110:0:110:4080:0	0/1:-109.071,0,-131.491:92:49:43:1606:1836	1/1:-374.219,-34.6185,0:115:0:115:4323:0	0/1:-191.072,0,-91.9318:107:39:68:2593:1430	0/1:-166.192,0,-132.331:114:52:62:2315:1925	1/1:-199.694,-18.6639,0:62:0:62:2308:0	0/1:-188.133,0,-171.03:135:65:70:2647:2448
+chr1	227081850	.	G	A	2020.60	.	AB=0;ABP=0;AC=50;AF=1;AN=64;AO=25;CIGAR=1X;DP=2955;DPB=25;DPRA=0;EPP=3.09716;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=0;NS=1;NUMALT=1;ODDS=39.2625;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=930;QR=0;RO=0;RPL=21;RPP=28.1125;RPPR=0;RPR=4;RUN=1;SAF=9;SAP=7.26639;SAR=16;SF=1,2,4,5,6,7,8,9,10,11,12,13,14,15,16,18,19,20,22,23,25,26,27,28,29,30,31,32,33,34,35,36;SRF=0;SRP=0;SRR=0;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	1/1:-80.9374,-7.52575,0:25:0:25:930:0	1/1:-303.163,-30.404,0:101:0:101:3507:0	.	0/1:-215.852,0,-170.272:151:68:83:3016:2480	0/1:-121.045,0,-99.6285:87:41:46:1696:1465:41,46	1/1:-273.176,-25.8886,0:86:0:86:3143:0:0,86	0/1:-175.481,0,-143.737:130:60:69:2464:2096	0/1:-92.7195,0,-95.808:75:38:36:1326:1355	0/1:-114.903,0,-71.0416:78:32:45:1600:1081:32,45	0/1:-110.524,0,-118.152:93:46:45:1588:1672:46,45	1/1:-460.331,-45.205,0:156:1:153:5356:13	1/1:-359.814,-33.7801,0:117:1:115:4176:13:1,115	1/1:-308.729,-31.6082,0:106:0:105:3565:0	1/1:-205.849,-20.47,0:68:0:68:2423:0	1/1:-252.466,-24.3834,0:81:0:81:2925:0	1/1:-371.861,-36.1236,0:120:0:120:4333:0:0,120	.	1/1:-123.269,-12.3422,0:41:0:41:1413:0	1/1:-237.832,-20.5263,0:80:1:78:2788:36	1/1:-312.023,-30.7051,0:103:0:102:3607:0:0,102	.	0/1:-30.7175,0,-36.3266:28:16:12:447:507	1/1:-378.546,-35.2596,0:124:1:120:4411:13	.	1/1:-438.416,-43.0361,0:148:1:146:5091:14:1,146	1/1:-364.724,-38.5318,0:128:0:128:4180:0	0/1:-171.2,0,-171.971:139:69:70:2473:2451:69,70	0/1:-68.0681,0,-92.1719:67:36:30:1007:1298	1/1:-438.319,-44.8535,0:149:0:149:5056:0	0/1:-138.511,0,-71.6852:87:32:55:1891:1120	0/1:-82.1588,0,-65.9841:61:27:34:1165:965	1/1:-196.874,-18.7701,0:67:1:66:2278:14	0/1:-104.696,0,-80.4486:73:32:41:1454:1173	0/1:-71.8223,0,-63.1462:55:26:29:1012:911	1/1:-131.02,-12.6433,0:42:0:42:1506:0	0/1:-97.5382,0,-119.553:89:49:40:1425:1673
+chr1	228399482	.	C	G	2377.08	.	AB=0.551724;ABP=4.35811;AC=44;AF=0.5;AN=64;AO=32;CIGAR=1X;DP=4110;DPB=58;DPRA=0;EPP=4.09604;EPPR=3.0103;GTI=0;LEN=1;MEANALT=1;MQM=41.9375;MQMR=42;NS=1;NUMALT=1;ODDS=128.346;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1154;QR=925;RO=26;RPL=10;RPP=12.7819;RPPR=15.0369;RPR=22;RUN=1;SAF=16;SAP=3.0103;SAR=16;SF=1,2,3,4,5,6,7,8,9,10,11,12,13,14,15,16,17,18,19,20,21,22,23,26,27,28,29,30,33,34,35,36;SRF=18;SRP=11.3621;SRR=8;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	0/1:-82.938,0,-63.3057:58:26:32:1154:925	1/1:-349.066,-35.0256,0:118:1:116:4089:12	0/1:-160.878,0,-176.054:137:70:66:2317:2545:70,66	0/1:-217.684,0,-215.058:169:84:85:3090:3067	0/1:-181.625,0,-169.296:141:67:74:2574:2439:67,74	1/1:-278.866,-27.0927,0:90:0:90:3233:0:0,90	1/1:-520.003,-49.3754,0:169:1:168:6049:15	0/1:-134.189,0,-115.789:96:45:51:1891:1674	0/1:-139.044,0,-114.739:101:45:56:1955:1668:45,56	1/1:-420.229,-40.338,0:135:0:134:4877:0:0,134	0/1:-190.751,0,-216.729:169:88:81:2783:3114	0/1:-179.595,0,-224.906:155:85:70:2605:3140:85,70	0/1:-175.234,0,-186.362:147:75:72:2528:2641	1/1:-278.045,-26.4906,0:88:0:88:3196:0	0/1:-217.747,0,-158.346:157:68:87:3123:2439	1/1:-369.101,-36.1236,0:120:0:120:4286:0:0,120	0/1:-217.149,0,-186.807:160:73:87:3085:2725	1/1:-243.091,-23.4803,0:78:0:78:2793:0	1/1:-425.569,-40.9401,0:136:0:136:4971:0	0/1:-196.244,0,-210.401:166:84:82:2826:2992:84,82	0/1:-149.228,0,-13.3378:65:10:55:1936:375:10,55	0/1:-61.8793,0,-51.3796:45:20:25:864:743	1/1:-466.091,-45.4555,0:152:0:151:5362:0	.	.	0/1:-177.97,0,-202.376:159:80:77:2595:2873	0/1:-270.522,0,-191.199:191:83:108:3784:2891:83,108	1/1:-315.66,-31.0061,0:103:0:103:3644:0	0/1:-198.742,0,-234.897:179:94:85:2916:3347	0/1:-225.082,0,-102.236:127:45:82:3029:1614	.	.	1/1:-456.687,-43.6494,0:145:0:145:5259:0	0/1:-143.031,0,-162.425:119:62:57:2056:2280	1/1:-189.858,-16.8727,0:64:1:63:2208:24	0/1:-211.42,0,-219.219:171:86:85:3047:3128
+chr1	228399519	.	T	A	1945.35	.	AB=0.5;ABP=3.0103;AC=1;AF=0.5;AN=2;AO=82;CIGAR=1X;DP=164;DPB=164;DPRA=0;EPP=3.0103;EPPR=3.11623;GTI=0;LEN=1;MEANALT=1;MQM=41;MQMR=41.9024;NS=1;NUMALT=1;ODDS=447.933;PAIRED=0.963415;PAIREDR=0.97561;PAO=0;PQA=0;PQR=0;PRO=0;QA=2916;QR=3039;RO=82;RPL=42;RPP=3.11623;RPPR=4.70511;RPR=40;RUN=1;SAF=47;SAP=6.82362;SAR=35;SF=19;SRF=45;SRP=4.70511;SRR=37;TYPE=snp	GT:GL:DP:RO:AO:QA:QR	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-201.298,0,-214.343:164:82:82:2916:3039	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr1	228399766	.	T	C	270.38	.	AB=0.571429;ABP=3.32051;AC=38;AF=0.5;AN=54;AO=4;CIGAR=1X;DP=480;DPB=7;DPRA=0;EPP=5.18177;EPPR=3.73412;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=42;NS=1;NUMALT=1;ODDS=8.91483;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=143;QR=115;RO=3;RPL=4;RPP=11.6962;RPPR=9.52472;RPR=0;RUN=1;SAF=1;SAP=5.18177;SAR=3;SF=1,2,3,4,5,6,7,8,9,10,11,12,14,16,17,18,19,20,23,26,27,28,30,33,34,35,36;SRF=1;SRP=3.73412;SRR=2;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	0/1:-10.7444,0,-8.18983:7:3:4:143:115	1/1:-29.4309,-3.0103,0:10:0:10:336:0	0/1:-18.431,0,-22.3514:15:8:7:260:307:8,7	0/1:-27.1905,0,-33.8565:24:13:11:393:470	0/1:-20.7125,0,-52.5381:28:19:9:332:697:19,9	1/1:-16.5007,-1.50515,0:5:0:5:186:0:0,5	1/1:-83.3813,-7.82678,0:26:0:26:954:0	0/1:-9.7992,0,-44.5926:22:16:6:189:585	0/1:-21.2227,0,-17.7947:15:7:8:292:251:7,8	1/1:-72.0065,-6.92369,0:23:0:23:839:0:0,23	0/1:-10.4414,0,-13.0424:9:5:4:147:176	0/1:-63.125,0,-27.3434:38:14:24:853:478:14,24	.	1/1:-13.3549,-1.20412,0:4:0:4:150:0	.	1/1:-29.6643,-2.70927,0:9:0:9:338:0:0,9	0/1:-9.54074,0,-21.0778:13:8:5:165:285	1/1:-29.9775,-3.0103,0:10:0:10:339:0	1/1:-80.6782,-8.12781,0:27:0:27:946:0	0/1:-39.0826,0,-47.0775:34:18:16:565:658:18,16	.	.	1/1:-103.557,-9.63296,0:32:0:32:1190:0	.	.	0/1:-15.558,0,-42.5671:23:16:7:254:565	0/1:-25.4392,0,-29.7193:23:12:11:367:416:12,11	1/1:-19.9345,-1.80618,0:6:0:6:226:0	.	0/1:-22.1883,0,-12.8929:13:5:8:296:190	.	.	1/1:-79.0909,-7.52575,0:25:0:25:906:0	0/1:-10.1289,0,-25.158:14:9:5:161:334	0/1:-23.8566,0,-3.86311:10:2:8:307:75	0/1:-18.9333,0,-15.2881:15:6:9:321:224
+chr1	228399799	.	C	T	23.95	.	AB=0.5;ABP=3.0103;AC=1;AF=0.5;AN=2;AO=2;CIGAR=1X;DP=4;DPB=4;DPRA=0;EPP=3.0103;EPPR=3.0103;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=42;NS=1;NUMALT=1;ODDS=1.54572;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=70;QR=44;RO=2;RPL=2;RPP=7.35324;RPPR=7.35324;RPR=0;RUN=1;SAF=1;SAP=3.0103;SAR=1;SF=34;SRF=1;SRP=3.0103;SRR=1;TYPE=snp	GT:GL:DP:RO:AO:QA:QR	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-5.26834,0,-2.95879:4:2:2:70:44	.	.
+chr1	228399824	.	C	A	57.40	.	AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X;DP=2;DPB=2;DPRA=0;EPP=3.0103;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=0;NS=1;NUMALT=1;ODDS=7.37776;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=76;QR=0;RO=0;RPL=0;RPP=7.35324;RPPR=0;RPR=2;RUN=1;SAF=1;SAP=3.0103;SAR=1;SF=17;SRF=0;SRP=0;SRR=0;TYPE=snp	GT:GL:DP:RO:AO:QA:QR	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	1/1:-6.94351,-0.60206,0:2:0:2:76:0	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr1	228400178	.	G	A	285.62	.	AB=0.761905;ABP=15.5221;AC=1;AF=0.5;AN=2;AO=16;CIGAR=1X;DP=21;DPB=21;DPRA=0;EPP=22.5536;EPPR=7.35324;GTI=0;LEN=1;MEANALT=2;MQM=42;MQMR=42;NS=1;NUMALT=1;ODDS=14.3034;PAIRED=0.875;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=487;QR=70;RO=2;RPL=0;RPP=37.7539;RPPR=7.35324;RPR=16;RUN=1;SAF=14;SAP=22.5536;SAR=2;SF=7;SRF=2;SRP=7.35324;SRR=0;TYPE=snp	GT:GL:DP:RO:AO:QA:QR	.	.	.	.	.	.	.	0/1:-37.8749,0,-0.82814:21:2:16:487:70	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr1	228400286	.	G	T	1161.14	.	AB=0.377778;ABP=20.5268;AC=1;AF=0.5;AN=2;AO=51;CIGAR=1X;DP=135;DPB=135;DPRA=0;EPP=5.09662;EPPR=5.59539;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=41.3214;NS=1;NUMALT=1;ODDS=267.362;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1900;QR=3114;RO=84;RPL=25;RPP=3.05288;RPPR=29.4816;RPR=26;RUN=1;SAF=28;SAP=4.07475;SAR=23;SF=1;SRF=39;SRP=3.94093;SRR=45;TYPE=snp	GT:GL:DP:RO:AO:QA:QR	.	0/1:-124.21,0,-227.423:135:84:51:1900:3114	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr1	228401183	.	G	C	1847.34	.	AB=0.457317;ABP=5.60547;AC=1;AF=0.5;AN=2;AO=75;CIGAR=1X;DP=164;DPB=164;DPRA=0;EPP=9.52472;EPPR=3.22989;GTI=0;LEN=1;MEANALT=1;MQM=41.9467;MQMR=41.7753;NS=1;NUMALT=1;ODDS=425.366;PAIRED=0.973333;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2807;QR=3177;RO=89;RPL=29;RPP=11.3777;RPPR=44.0243;RPR=46;RUN=1;SAF=47;SAP=13.4623;SAR=28;SF=33;SRF=56;SRP=15.9171;SRR=33;TYPE=snp	GT:GL:DP:RO:AO:QA:QR	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-193.832,0,-226.765:164:89:75:2807:3177	.	.	.
+chr1	228402047	.	A	G	8385.96	.	AB=0.51751;ABP=3.69469;AC=44;AF=0.5;AN=64;AO=133;CIGAR=1X;DP=16557;DPB=257;DPRA=0;EPP=3.15724;EPPR=3.17453;GTI=0;LEN=1;MEANALT=3;MQM=38.1504;MQMR=39.4538;NS=1;NUMALT=1;ODDS=583.486;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=4089;QR=3903;RO=119;RPL=61;RPP=4.98585;RPPR=3.02855;RPR=72;RUN=1;SAF=85;SAP=25.3618;SAR=48;SF=1,2,3,4,5,6,7,8,9,10,11,12,13,14,15,16,17,18,19,20,21,22,23,26,27,28,29,30,33,34,35,36;SRF=59;SRP=3.02855;SRR=60;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	0/1:-274.534,0,-260.302:257:119:133:4089:3903	1/1:-1328.48,-147.806,0:500:1:492:15837:12	0/1:-455.214,0,-488.834:447:226:213:6938:7280:226,213	0/1:-777.689,0,-898.703:790:405:372:11960:13264	0/1:-758.742,0,-824.734:709:359:341:11503:11999:359,341	1/1:-953.846,-103.715,0:367:3:356:11397:52:3,356	1/1:-2162.6,-228.338,0:783:3:768:25572:54	0/1:-554.021,0,-492.226:477:222:248:8223:7417	0/1:-406.098,0,-429.935:405:202:197:6195:6448:202,197	1/1:-1608.47,-167.525,0:580:3:568:18981:53:3,568	0/1:-567.526,0,-607.88:574:284:275:8781:9054	0/1:-710.335,0,-872.967:731:396:321:10853:13048:396,321	0/1:-686.929,0,-557.219:586:261:313:10080:8466	1/1:-819.19,-89.1707,0:305:1:296:9693:12	0/1:-599.267,0,-467.036:515:220:281:9074:7266	1/1:-1647.4,-180.186,0:623:4:610:19908:63:4,610	0/1:-647.45,0,-526.282:558:248:302:9636:8164	1/1:-937.794,-101.441,0:358:3:346:11250:69	1/1:-1286.75,-138.503,0:488:3:473:15354:61	0/1:-657.119,0,-806.436:676:357:306:10078:11838:357,306	0/1:-410.078,0,-60.7704:232:49:174:5483:1459:49,174	0/1:-271.295,0,-245.778:253:117:129:4063:3707	1/1:-2234.18,-232.167,0:789:3:780:26141:40	.	.	0/1:-751.109,0,-689.39:695:323:362:11365:10427	0/1:-733.268,0,-725.513:684:329:344:11002:10861:329,344	1/1:-936.264,-104.755,0:359:1:349:10958:12	0/1:-760.564,0,-874.504:772:393:369:11720:12899	0/1:-326.908,0,-433.585:367:198:155:5132:6437	.	.	1/1:-1279.08,-141.785,0:481:0:471:15001:0	0/1:-384.614,0,-486.003:405:219:182:5891:7196	1/1:-645.915,-68.3338,0:228:0:227:7560:0	0/1:-555.635,0,-665.073:563:300:256:8476:9803
+chr1	228402121	.	A	G	7994.39	.	AB=0.525424;ABP=4.00402;AC=44;AF=0.5;AN=64;AO=93;CIGAR=1X;DP=13566;DPB=177;DPRA=0;EPP=6.95631;EPPR=3.66436;GTI=0;LEN=1;MEANALT=2;MQM=41.5484;MQMR=41.9759;NS=1;NUMALT=1;ODDS=440.244;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=3391;QR=2906;RO=83;RPL=63;RPP=28.4375;RPPR=19.3617;RPR=30;RUN=1;SAF=49;SAP=3.59403;SAR=44;SF=1,2,3,4,5,6,7,8,9,10,11,12,13,14,15,16,17,18,19,20,21,22,23,26,27,28,29,30,33,34,35,36;SRF=37;SRP=5.12945;SRR=46;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	0/1:-238.929,0,-199.631:177:83:93:3391:2906	1/1:-1373.78,-137,0:467:1:461:16092:39	0/1:-523.788,0,-399.369:385:170:208:7525:6056:170,208	0/1:-663.604,0,-686.466:555:272:278:9782:9929	0/1:-700.017,0,-713.344:571:285:281:10193:10270:285,281	1/1:-1005.51,-97.7436,0:336:1:333:11845:31:1,333	1/1:-1897.97,-184.832,0:618:0:614:22159:0	0/1:-464.972,0,-399.865:363:170:189:6737:6029	0/1:-373.279,0,-405.596:334:172:156:5550:5883:172,156	1/1:-1384.8,-134.259,0:449:0:446:16341:0:0,446	0/1:-680.356,0,-502.6:501:217:280:9738:7622	0/1:-761.162,0,-695:608:288:306:10937:10315:288,306	0/1:-664.415,0,-428.11:462:189:272:9387:6598	1/1:-835.865,-83.0843,0:279:0:276:9831:0	0/1:-647.725,0,-483.96:461:198:260:9235:7215	1/1:-1543.8,-152.923,0:510:0:508:18514:0:0,508	0/1:-695.07,0,-549.559:514:229:278:9940:8229	1/1:-901.619,-91.2121,0:303:0:303:10643:0	1/1:-1249.41,-123.315,0:424:1:420:14805:39	0/1:-598.399,0,-683.64:520:272:244:8867:9780:272,244	0/1:-413.768,0,-64.3613:196:40:154:5441:1410:40,154	0/1:-264.089,0,-200.043:198:87:108:3801:2998	1/1:-1815.64,-175.5,0:586:0:583:21131:0	.	.	0/1:-780.462,0,-479.705:552:219:328:11047:7530	0/1:-814.329,0,-607.292:588:260:323:11664:9113:260,323	1/1:-957.847,-94.2224,0:316:0:313:11039:0	0/1:-752.663,0,-704.365:623:297:321:11047:10312	0/1:-377.534,0,-380.674:310:152:156:5557:5556	.	.	1/1:-1164.06,-115.918,0:388:1:386:13561:12	0/1:-365.516,0,-415.588:330:171:154:5505:6042	1/1:-602.209,-58.7009,0:195:0:195:7059:0	0/1:-529.463,0,-553.698:447:223:218:7735:8076
+chr1	228402508	.	C	T	2409.36	.	AB=0;ABP=0;AC=30;AF=1;AN=50;AO=161;CIGAR=1X;DP=4162;DPB=162;DPRA=0;EPP=27.9485;EPPR=5.18177;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=42;NS=1;NUMALT=1;ODDS=217.762;PAIRED=0.993789;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=5962;QR=38;RO=1;RPL=30;RPP=140.595;RPPR=5.18177;RPR=131;RUN=1;SAF=128;SAP=124.734;SAR=33;SF=0,1,3,4,5,8,9,11,12,13,15,17,20,21,22,24,25,26,27,29,30,31,32,34,36;SRF=1;SRP=5.18177;SRR=0;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	1/1:-512.387,-45.1124,0:162:1:161:5962:38:1,161	0/1:-61.2874,0,-72.708:52:28:24:903:1012	.	0/1:-248.665,0,-205.615:180:83:96:3527:2998:83,96	0/1:-279.593,0,-270.979:213:106:106:3989:3865	0/1:-253.063,0,-229.945:189:91:97:3599:3293:91,97	.	.	0/1:-184.673,0,-146.004:130:59:70:2581:2127	0/1:-187.902,0,-191.217:149:74:75:2683:2715:74,75	.	0/1:-329.888,0,-225.455:223:95:127:4600:3372	0/1:-273.138,0,-326.245:239:128:111:3976:4575:128,111	0/1:-218.459,0,-261.912:192:101:91:3183:3689	.	0/1:-237.583,0,-246.152:192:97:94:3402:3494	.	0/1:-255.517,0,-238.735:191:92:99:3615:3408	.	.	0/1:-326.965,0,-245.269:221:99:122:4552:3594:99,122	0/1:-36.5508,0,-171.76:81:62:19:701:2268:62,19	0/1:-80.7933,0,-118.911:78:45:33:1209:1635	.	1/1:-160.502,-15.3525,0:51:0:51:1867:0:0,51	1/1:-702.629,-67.5369,0:229:1:228:8173:14:1,228	0/1:-282.566,0,-201.013:203:86:117:3992:3039	0/1:-260.631,0,-264.607:211:104:105:3764:3767:104,105	.	0/1:-352.131,0,-345.728:282:140:142:5129:4959	0/1:-104.441,0,-157.884:103:61:42:1561:2177	1/1:-390.296,-36.2298,0:125:1:124:4564:14	1/1:-499.809,-47.5627,0:158:0:158:5774:0	.	0/1:-132.016,0,-166.444:113:62:51:1917:2309	.	0/1:-258.356,0,-240.993:195:94:101:3659:3449
+chr1	228404169	.	G	A	3837.05	.	AB=0.541667;ABP=7.35324;AC=1;AF=0.5;AN=2;AO=156;CIGAR=1X;DP=288;DPB=288;DPRA=0;EPP=25.2818;EPPR=20.1148;GTI=0;LEN=1;MEANALT=2;MQM=41.7179;MQMR=40.7;NS=1;NUMALT=1;ODDS=675.498;PAIRED=0.980769;PAIREDR=0.969231;PAO=0;PQA=0;PQR=0;PRO=0;QA=5622;QR=4730;RO=130;RPL=44;RPP=67.375;RPPR=126.55;RPR=112;RUN=1;SAF=84;SAP=5.01474;SAR=72;SF=16;SRF=67;SRP=3.27756;SRR=63;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-400.179,0,-315.753:288:130:156:5622:4730:130,156	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr1	228404198	.	G	A	3232.36	.	AB=0.66;ABP=25.2462;AC=3;AF=0.5;AN=6;AO=66;CIGAR=1X;DP=664;DPB=100;DPRA=0;EPP=6.30041;EPPR=9.39698;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=42;NS=1;NUMALT=1;ODDS=145.158;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2449;QR=1204;RO=34;RPL=27;RPP=7.74806;RPPR=39.7976;RPR=39;RUN=1;SAF=39;SAP=7.74806;SAR=27;SF=24,32,34;SRF=21;SRP=7.09778;SRR=13;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-182.949,0,-74.98:100:34:66:2449:1204:34,66	.	.	.	.	.	.	.	0/1:-420.675,0,-263.42:269:110:159:5778:3959	.	0/1:-394.681,0,-355.927:295:141:154:5565:5119	.	.
+chr1	228404305	.	G	A	1943.93	.	AB=0.438144;ABP=9.45756;AC=1;AF=0.5;AN=2;AO=85;CIGAR=1X;DP=194;DPB=194;DPRA=0;EPP=3.24022;EPPR=3.03022;GTI=0;LEN=1;MEANALT=1;MQM=41.9529;MQMR=41.3578;NS=1;NUMALT=1;ODDS=447.606;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3025;QR=3815;RO=109;RPL=61;RPP=37.9838;RPPR=13.5489;RPR=24;RUN=1;SAF=48;SAP=6.10145;SAR=37;SF=31;SRF=60;SRP=5.42083;SRR=49;TYPE=snp	GT:GL:DP:RO:AO:QA:QR	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-205.371,0,-271.191:194:109:85:3025:3815	.	.	.	.	.
+chr1	228404997	.	C	T	2063.91	.	AB=0.502762;ABP=3.0223;AC=3;AF=0.5;AN=6;AO=91;CIGAR=1X;DP=624;DPB=181;DPRA=0;EPP=20.4059;EPPR=29.5803;GTI=0;LEN=1;MEANALT=2;MQM=41.8022;MQMR=41.1685;NS=1;NUMALT=1;ODDS=441.085;PAIRED=1;PAIREDR=0.988764;PAO=0;PQA=0;PQR=0;PRO=0;QA=3365;QR=3221;RO=89;RPL=80;RPP=116.619;RPPR=147.669;RPR=11;RUN=1;SAF=21;SAP=60.3038;SAR=70;SF=11,12,17;SRF=22;SRP=52.4174;SRR=67;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	.	0/1:-236.343,0,-222.77:181:89:91:3365:3221	0/1:-228.847,0,-335.095:219:127:92:3412:4621:127,92	.	.	.	.	0/1:-236.872,0,-332.334:224:128:96:3511:4606	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr1	228407010	.	C	T	2664.78	.	AB=0;ABP=0;AC=30;AF=1;AN=50;AO=180;CIGAR=1X;DP=4612;DPB=180;DPRA=0;EPP=6.09862;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=39.5389;MQMR=0;NS=1;NUMALT=1;ODDS=254.138;PAIRED=0.994444;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=6610;QR=0;RO=0;RPL=66;RPP=30.8051;RPPR=0;RPR=114;RUN=1;SAF=148;SAP=165.34;SAR=32;SF=0,1,3,4,5,8,9,11,12,13,15,17,20,21,22,24,25,26,27,29,30,31,32,34,36;SRF=0;SRP=0;SRR=0;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	1/1:-552.256,-54.1854,0:180:0:180:6610:0:0,180	0/1:-83.4861,0,-82.1811:68:34:34:1277:1231	.	0/1:-190.465,0,-219.963:165:85:80:2885:3132:85,80	0/1:-288.858,0,-313.238:240:122:118:4344:4460	0/1:-207.901,0,-325.659:219:127:92:3385:4580:127,92	.	.	0/1:-162.357,0,-151.183:127:61:66:2380:2202	0/1:-178.294,0,-210.376:153:81:71:2639:2966:81,71	.	0/1:-238.151,0,-396.836:264:156:107:3706:5545	0/1:-242.474,0,-229.351:197:94:102:3680:3423:94,102	0/1:-180.006,0,-257.698:178:101:77:2722:3632	.	0/1:-205.61,0,-203.959:175:87:88:3133:3026	.	0/1:-322.17,0,-268.266:240:113:125:4680:4158	.	.	0/1:-306.952,0,-238.798:222:100:122:4433:3535:100,122	0/1:-69.1635,0,-119.759:82:47:34:1186:1696:47,34	0/1:-145.721,0,-136.916:117:55:61:2117:1992	.	1/1:-394.924,-37.9298,0:126:0:126:4640:0:0,126	1/1:-764.189,-73.8582,0:250:1:249:9079:14:1,249	0/1:-295.506,0,-337.042:267:136:129:4402:4860	0/1:-360.036,0,-277.416:258:115:143:5143:4124:115,143	.	0/1:-316.677,0,-359.336:281:144:135:4792:5172	0/1:-142.095,0,-224.039:148:85:63:2286:3133	1/1:-534.188,-52.6803,0:175:0:175:6259:0	1/1:-550.239,-52.8881,0:181:1:180:6559:16	.	0/1:-164.956,0,-159.839:132:65:67:2475:2340	.	0/1:-261.441,0,-154.665:167:64:102:3745:2372
+chr1	228407059	.	G	T	3885.48	.	AB=0.580808;ABP=25.4708;AC=3;AF=0.5;AN=6;AO=230;CIGAR=1X;DP=1165;DPB=396;DPRA=0;EPP=8.44842;EPPR=22.3659;GTI=0;LEN=1;MEANALT=2;MQM=37.4957;MQMR=39.5741;NS=1;NUMALT=1;ODDS=770.441;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=7614;QR=5707;RO=162;RPL=81;RPP=46.6663;RPPR=64.9911;RPR=149;RUN=1;SAF=154;SAP=60.4505;SAR=76;SF=11,12,17;SRF=117;SRP=72.4974;SRR=45;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	.	0/1:-494.742,0,-359.616:396:162:230:7614:5707	0/1:-340.6,0,-483.333:370:206:164:5780:7237:206,164	.	.	.	.	0/1:-384.635,0,-542.699:399:218:181:6574:7999	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr1	228407260	.	G	A	8571.74	.	AB=0;ABP=0;AC=30;AF=1;AN=50;AO=547;CIGAR=1X;DP=13634;DPB=547;DPRA=0;EPP=25.3403;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=41.5393;MQMR=0;NS=1;NUMALT=1;ODDS=762.908;PAIRED=0.992687;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=20264;QR=0;RO=0;RPL=365;RPP=135.954;RPPR=0;RPR=182;RUN=1;SAF=199;SAP=91.1435;SAR=348;SF=0,1,3,4,5,8,9,11,12,13,15,17,20,21,22,24,25,26,27,29,30,31,32,34,36;SRF=0;SRP=0;SRR=0;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	1/1:-1743.03,-164.663,0:547:0:547:20264:0:0,547	0/1:-349.024,0,-316.708:255:123:132:4967:4590	.	0/1:-702.423,0,-706.674:540:269:270:10048:10097:269,270	0/1:-983.206,0,-861.486:710:336:373:13900:12519	0/1:-896.815,0,-815.854:662:318:344:12769:11805:318,344	.	.	0/1:-518.139,0,-606.132:434:230:204:7545:8554	0/1:-692.72,0,-521.401:474:208:266:9675:7713:208,266	.	0/1:-873.339,0,-774.826:667:310:356:12439:11325	0/1:-1058.03,0,-965.642:786:380:406:15056:14067:380,406	0/1:-607.973,0,-670.971:497:255:242:8771:9506	.	0/1:-729.1,0,-784.588:594:305:288:10630:11235	.	0/1:-790.668,0,-830.583:628:320:307:11348:11869	.	.	0/1:-804.291,0,-993.021:692:373:318:11792:13959:373,318	0/1:-100.024,0,-595.009:271:213:58:2111:7820:213,58	0/1:-345.027,0,-393.947:290:152:138:5005:5597	.	1/1:-1017.62,-95.2814,0:322:1:320:11806:15:1,320	1/1:-2509.14,-232.092,0:803:4:798:29204:106:4,798	0/1:-716.328,0,-842.283:632:327:305:10540:12052	0/1:-827.943,0,-814.274:631:314:317:11816:11648:314,317	.	0/1:-922.192,0,-1064.04:785:410:373:13463:15097	0/1:-591.179,0,-615.978:470:237:233:8500:8771	1/1:-1118.04,-108.076,0:364:1:363:12978:15	1/1:-1807.03,-173.092,0:575:0:575:21010:0	.	0/1:-637.265,0,-575.466:475:229:245:9122:8354	.	0/1:-623.697,0,-750.811:530:281:249:9056:10563
+chr1	228412227	.	TG	CA	6504.06	.	AB=0;ABP=0;AC=30;AF=1;AN=50;AO=513;CIGAR=2X;DP=14050;DPB=515;DPRA=0;EPP=5.2495;EPPR=0;GTI=0;LEN=2;MEANALT=2;MQM=33.4269;MQMR=0;NS=1;NUMALT=1;ODDS=717.16;PAIRED=0.996101;PAIREDR=0;PAO=2;PQA=71;PQR=0;PRO=0;QA=18248;QR=0;RO=0;RPL=165;RPP=144.766;RPPR=0;RPR=348;RUN=1;SAF=298;SAP=32.1707;SAR=215;SF=0,1,3,4,5,8,9,11,12,13,15,17,20,21,22,24,25,26,27,29,30,31,32,34,36;SRF=0;SRP=0;SRR=0;TYPE=mnp	GT:GL:DP:RO:AO:QA:QR:AD	1/1:-1358.61,-155.03,0:514:0:513:18248:0:0,513	0/1:-154.336,0,-289.826:206:117:88:3010:4170	.	0/1:-489.8,0,-742.706:589:309:277:9572:11016:309,277	0/1:-664.187,0,-1014.1:743:407:329:11474:14646	0/1:-611.698,0,-860.053:683:355:323:11515:12719:355,323	.	.	0/1:-512.053,0,-479.144:464:209:253:8765:7410	0/1:-438.589,0,-640.554:482:267:213:7629:9455:267,213	.	0/1:-609.048,0,-679.539:603:291:301:9956:10102	0/1:-705.28,0,-1031.92:836:437:388:13607:15388:437,388	0/1:-648.317,0,-664.271:607:293:312:10807:10191	.	0/1:-512.228,0,-793.936:642:336:295:9667:11771	.	0/1:-680.411,0,-1064.49:801:432:359:12460:15360	.	.	0/1:-592.532,0,-849.112:665:351:306:10821:12449:351,306	0/1:-88.6,0,-272.073:185:118:65:2215:3914:118,65	0/1:-218.921,0,-361.712:279:155:119:3968:5204	.	1/1:-763.293,-86.0946,0:284:0:284:10046:0:0,284	1/1:-1948.35,-219.752,0:733:0:726:25461:0:0,726	0/1:-555.495,0,-828.423:671:364:295:9604:12302	0/1:-580.098,0,-895.227:682:378:298:10457:13113:378,298	.	0/1:-803.089,0,-942.426:840:415:412:13509:14229	0/1:-490.422,0,-683.708:546:287:255:8734:10137	1/1:-875.886,-100.845,0:336:0:335:10872:0	1/1:-1461.45,-162.999,0:568:2:560:19195:74	.	0/1:-412.843,0,-702.479:519:286:227:7792:10248	.	0/1:-479.319,0,-778.525:572:324:246:8421:11333
+chr1	228412308	.	G	A	10617.75	.	AB=0;ABP=0;AC=30;AF=1;AN=50;AO=870;CIGAR=1X;DP=20915;DPB=873;DPRA=0;EPP=5.89561;EPPR=3.0103;GTI=0;LEN=1;MEANALT=2;MQM=31.9713;MQMR=38.5;NS=1;NUMALT=1;ODDS=1189.13;PAIRED=0.995402;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=32870;QR=73;RO=2;RPL=476;RPP=19.793;RPPR=3.0103;RPR=394;RUN=1;SAF=466;SAP=12.6047;SAR=404;SF=0,1,3,4,5,8,9,11,12,13,15,17,20,21,22,24,25,26,27,29,30,31,32,34,36;SRF=0;SRP=7.35324;SRR=2;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	1/1:-2284.01,-256.31,0:873:2:870:32870:73:2,870	0/1:-287.984,0,-457.464:349:184:165:6187:6900	.	0/1:-825.819,0,-1067.56:856:431:423:15833:16060:431,423	0/1:-1061.67,0,-1471.15:1099:587:511:19254:21765	0/1:-1019.43,0,-1257.21:1033:514:517:19247:19061:514,517	.	.	0/1:-795.848,0,-916.264:778:375:403:15185:13975	0/1:-676.689,0,-1018.07:739:406:333:12486:15101:406,333	.	0/1:-1013.14,0,-1017.78:900:429:470:17312:15757	0/1:-1042.43,0,-1592.18:1165:630:535:20035:23415:630,535	0/1:-866.034,0,-897.128:784:374:409:15123:13741	.	0/1:-811.672,0,-1158.7:896:472:422:15804:17431	.	0/1:-1143.65,0,-1494.51:1170:596:573:21291:22346	.	.	0/1:-927.667,0,-1379.99:1020:550:469:17609:20519:550,469	0/1:-163.621,0,-300.955:229:128:101:3738:4609:128,101	0/1:-390.469,0,-542.73:413:222:190:7030:8131	.	1/1:-1155.96,-129.142,0:429:0:429:16291:0:0,429	1/1:-3112.77,-345.961,0:1154:1:1152:42771:13:1,1152	0/1:-947.745,0,-1217.23:979:516:463:16948:18483	0/1:-1025.97,0,-1205.09:993:498:493:18327:18225:498,493	.	0/1:-1310.69,0,-1412.2:1213:591:622:22700:21702	0/1:-812.836,0,-1021.81:821:417:404:15255:15388	1/1:-1351.18,-146.301,0:487:0:486:17953:0	1/1:-2222.84,-249.554,0:829:0:829:31018:0	.	0/1:-759.258,0,-993.792:786:405:381:14378:15114	.	0/1:-772.328,0,-1312.09:920:523:395:14939:19475
+chr1	228431095	.	A	G	11435.64	.	AB=0;ABP=0;AC=42;AF=1;AN=62;AO=629;CIGAR=1X;DP=20224;DPB=629;DPRA=0;EPP=11.2992;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=38.3402;MQMR=0;NS=1;NUMALT=1;ODDS=876.584;PAIRED=0.988871;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=23183;QR=0;RO=0;RPL=496;RPP=457.911;RPPR=0;RPR=133;RUN=1;SAF=257;SAP=48.6665;SAR=372;SF=0,1,2,3,4,5,6,8,9,11,12,13,15,16,17,20,21,22,23,24,25,26,27,28,29,30,31,32,33,34,36;SRF=0;SRP=0;SRR=0;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	1/1:-1888.26,-189.348,0:629:0:629:23183:0:0,629	1/1:-896.393,-90.2225,0:305:1:304:11234:16	1/1:-2114.6,-217.703,0:726:2:722:26267:43	0/1:-992.121,0,-803.966:745:328:417:15219:12211:328,417	0/1:-936.432,0,-988.641:785:389:396:14442:14508	0/1:-933.653,0,-1037.84:800:408:392:14442:15224:408,392	1/1:-1467.56,-148.609,0:495:1:493:18105:38:1,493	.	0/1:-592.684,0,-743.854:536:287:247:9172:10730	0/1:-599.358,0,-743.343:554:292:259:9519:10847:292,259	.	0/1:-930.625,0,-1059.18:816:424:392:14357:15526	0/1:-1113.56,0,-1197.32:940:474:463:17083:17602:474,463	1/1:-2117.91,-215.236,0:716:0:715:25927:0	.	0/1:-839.52,0,-894.212:714:359:354:12822:13282	0/1:-756.911,0,-836.123:654:330:324:11794:12253:330,324	0/1:-1035.16,0,-885.602:789:360:429:15782:13497	.	.	1/1:-2598.49,-258.886,0:860:0:860:31681:0:0,860	0/1:-344.84,0,-350.721:283:138:145:5214:5067:138,145	0/1:-485.062,0,-357.006:348:148:200:7116:5480	1/1:-2408.99,-244.436,0:812:0:812:29908:0	1/1:-1185.54,-115.048,0:404:2:401:14630:70:2,401	1/1:-2682.94,-271.173,0:917:3:914:33264:85:3,914	0/1:-928.037,0,-777.838:727:334:392:14100:11969	0/1:-960.374,0,-838.34:747:344:403:14732:12697:344,403	0/1:-476.195,0,-616.509:460:241:219:7746:8861	0/1:-970.954,0,-1013.35:834:419:415:14900:15130	0/1:-837.505,0,-754.783:646:306:339:12477:11407	1/1:-1242.47,-126.132,0:420:0:419:15467:0	1/1:-1962.32,-199.334,0:668:1:666:24457:16	0/1:-768.876,0,-629.076:571:252:319:11609:9478	0/1:-794.916,0,-678.821:596:275:320:11894:10265	.	0/1:-885.06,0,-870.757:727:352:375:13644:12907
+chr1	228432108	.	C	A	2785.42	.	AB=0.490536;ABP=3.50351;AC=1;AF=0.5;AN=2;AO=311;CIGAR=1X;DP=634;DPB=634;DPRA=0;EPP=3.57586;EPPR=3.56168;GTI=0;LEN=1;MEANALT=3;MQM=18.3633;MQMR=23.5799;NS=1;NUMALT=1;ODDS=641.366;PAIRED=0.990354;PAIREDR=0.981191;PAO=0;PQA=0;PQR=0;PRO=0;QA=10477;QR=10791;RO=319;RPL=97;RPP=98.59;RPPR=158.22;RPR=214;RUN=1;SAF=181;SAP=21.1711;SAR=130;SF=0;SRF=171;SRP=6.61127;SRR=148;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	0/1:-297.735,0,-435.587:634:319:311:10477:10791:319,311	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr1	228432264	.	A	T	996.33	.	AB=0.455959;ABP=6.26188;AC=5;AF=0.5;AN=10;AO=88;CIGAR=1X;DP=909;DPB=193;DPRA=0;EPP=4.58955;EPPR=21.4568;GTI=0;LEN=1;MEANALT=2;MQM=26.6023;MQMR=23.2626;NS=1;NUMALT=1;ODDS=221.738;PAIRED=0.977273;PAIREDR=0.979798;PAO=0;PQA=0;PQR=0;PRO=0;QA=2831;QR=3417;RO=99;RPL=72;RPP=80.3937;RPPR=107.438;RPR=16;RUN=1;SAF=24;SAP=42.4916;SAR=64;SF=12,13,27,29,30;SRF=20;SRP=79.3628;SRR=79;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-115.35,0,-130.228:193:99:88:2831:3417:99,88	0/1:-115.95,0,-106.267:175:93:77:2526:2955	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-120.855,0,-136.917:179:91:86:2830:3109:91,86	.	0/1:-168.09,0,-145.542:257:125:126:3962:3953	0/1:-69.8325,0,-72.7431:105:51:51:1621:1689	.	.	.	.	.	.
+chr1	228433217	.	A	G	4380.80	.	AB=0;ABP=0;AC=42;AF=1;AN=62;AO=615;CIGAR=1X;DP=18890;DPB=616;DPRA=0;EPP=3.09857;EPPR=5.18177;GTI=0;LEN=1;MEANALT=1;MQM=16.374;MQMR=2;NS=1;NUMALT=1;ODDS=853.758;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=21473;QR=39;RO=1;RPL=143;RPP=385.193;RPPR=5.18177;RPR=472;RUN=1;SAF=348;SAP=26.1762;SAR=267;SF=0,1,2,3,4,5,6,8,9,11,12,13,15,16,17,20,21,22,23,24,25,26,27,28,29,30,31,32,33,34,36;SRF=0;SRP=5.18177;SRR=1;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	1/1:-891.437,-185.235,0:616:1:615:21473:39:1,615	1/1:-523.821,-88.2018,0:293:0:293:9756:0	1/1:-1017.87,-211.177,0:705:1:701:23716:37	0/1:-230.421,0,-514.624:601:306:291:9949:10639:306,291	0/1:-420.653,0,-525.437:826:355:466:16057:12381	0/1:-288.453,0,-697.856:815:426:384:13143:14966:426,384	1/1:-837.252,-178.39,0:597:2:595:20349:70:2,595	.	0/1:-201.074,0,-378.616:516:251:261:9009:8762	0/1:-255.421,0,-416.988:574:272:302:10609:9402:272,302	.	0/1:-287.699,0,-468.256:678:321:351:11396:10652	0/1:-420.106,0,-675.454:904:428:470:16483:14966:428,470	1/1:-874.685,-192.874,0:644:1:643:21360:16	.	0/1:-319.388,0,-459.417:640:278:359:12167:9852	0/1:-259.627,0,-438.983:631:300:324:11179:10350:300,324	0/1:-353.507,0,-602.525:808:380:426:15001:13193	.	.	1/1:-1037.76,-218.643,0:745:5:739:25350:157:5,739	0/1:-64.4172,0,-157.696:153:83:70:2139:2604:83,70	0/1:-108.928,0,-217.824:307:149:156:4984:4833	1/1:-1087.4,-223.373,0:750:3:746:25885:90	1/1:-458.852,-98.7378,0:329:0:328:11001:0:0,328	1/1:-1111.23,-240.845,0:822:4:816:27404:100:4,816	0/1:-289.57,0,-466.742:742:355:378:12389:12036	0/1:-305.398,0,-512.524:749:350:394:13095:11991:350,394	0/1:-237.242,0,-336.436:391:187:203:6773:6136	0/1:-286.813,0,-586.704:792:398:388:12654:13307	0/1:-251.569,0,-398.95:547:253:293:9980:8767	1/1:-533.225,-123.121,0:410:0:409:13128:0	1/1:-859.071,-180.474,0:612:2:609:20463:77	0/1:-266.268,0,-310.867:505:214:288:9880:7471	0/1:-220.918,0,-431.905:560:273:283:9653:9694	.	0/1:-249.7,0,-481.281:628:298:327:11125:10309
+chr1	228434395	.	T	C	10643.71	.	AB=0;ABP=0;AC=42;AF=1;AN=62;AO=728;CIGAR=1X;DP=22885;DPB=729;DPRA=0;EPP=11.7081;EPPR=0;GTI=0;LEN=1;MEANALT=2;MQM=31.8516;MQMR=0;NS=1;NUMALT=1;ODDS=1013.83;PAIRED=0.995879;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=26375;QR=0;RO=0;RPL=457;RPP=106.203;RPPR=0;RPR=271;RUN=1;SAF=392;SAP=12.3643;SAR=336;SF=0,1,2,3,4,5,6,8,9,11,12,13,15,16,17,20,21,22,23,24,25,26,27,28,29,30,31,32,33,34,36;SRF=0;SRP=0;SRR=0;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	1/1:-1872.93,-219.15,0:729:0:728:26375:0:0,728	1/1:-734.012,-90.9111,0:303:0:302:11018:0	1/1:-2149.02,-262.97,0:875:1:873:30669:38	0/1:-705.888,0,-881.987:762:378:384:13617:13513:378,384	0/1:-880.934,0,-1264.06:986:518:468:16892:18862	0/1:-881.839,0,-1247.07:973:511:459:16606:18729:511,459	1/1:-1469.6,-172.257,0:577:1:575:20598:14:1,575	.	0/1:-580.006,0,-817.224:653:337:314:11326:12263	0/1:-702.325,0,-777.549:694:337:355:12700:12102:337,355	.	0/1:-744.915,0,-887.44:785:387:397:13962:13650	0/1:-1048.6,0,-1200.57:1072:516:555:19729:18647:516,555	1/1:-1969.11,-223.809,0:778:4:770:27263:105	.	0/1:-790.865,0,-905.56:809:395:412:14596:14081	0/1:-743.888,0,-823.905:754:356:395:14156:12885:356,395	0/1:-967.61,0,-1136.25:994:485:505:18270:17596	.	.	1/1:-2397.42,-289.591,0:964:0:962:34725:0:0,962	0/1:-154.618,0,-278.48:217:121:95:3268:4197:121,95	0/1:-285.84,0,-502.308:374:218:155:5369:7583	1/1:-2172.8,-257.08,0:854:0:854:30968:0	1/1:-961.904,-111.983,0:372:0:372:13382:0:0,372	1/1:-2578.83,-306.449,0:1020:0:1018:36210:0:0,1018	0/1:-863.957,0,-1091.31:944:479:461:16017:16863	0/1:-891.836,0,-1128.77:956:496:457:16351:17453:496,457	0/1:-427.506,0,-610.394:530:268:257:8986:9394	0/1:-959.484,0,-1119.62:1004:492:510:17640:17440	0/1:-641.696,0,-749.854:653:320:332:11972:11510	1/1:-1185.6,-133.689,0:456:1:455:16093:37	1/1:-1757.8,-210.721,0:700:0:700:25083:0	0/1:-543.305,0,-926.585:677:378:298:10531:13675	0/1:-629.641,0,-585.438:593:261:330:11789:9461	.	0/1:-740.146,0,-966.848:827:414:412:14467:14823
+chr1	228434467	.	T	C	6392.88	.	AB=0;ABP=0;AC=42;AF=1;AN=62;AO=367;CIGAR=1X;DP=11718;DPB=367;DPRA=0;EPP=38.0911;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=38.6839;MQMR=0;NS=1;NUMALT=1;ODDS=513.375;PAIRED=0.997275;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=13263;QR=0;RO=0;RPL=261;RPP=145.162;RPPR=0;RPR=106;RUN=1;SAF=154;SAP=23.6067;SAR=213;SF=0,1,2,3,4,5,6,8,9,11,12,13,15,16,17,20,21,22,23,24,25,26,27,28,29,30,31,32,33,34,36;SRF=0;SRP=0;SRR=0;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	1/1:-1087.86,-110.478,0:367:0:367:13263:0:0,367	1/1:-532.109,-54.1854,0:181:0:180:6564:0	1/1:-1276.02,-132.981,0:453:2:448:15917:28	0/1:-395.923,0,-438.196:368:182:183:6529:6464:182,183	0/1:-529.86,0,-625.082:480:249:229:8318:9109	0/1:-584.15,0,-742.766:543:293:250:9115:10676:293,250	1/1:-968.639,-101.146,0:336:0:336:11979:0:0,336	.	0/1:-337.61,0,-421.669:310:164:146:5275:6044	0/1:-439.532,0,-368.25:342:155:187:6719:5579:155,187	.	0/1:-455.059,0,-577.133:439:234:204:7224:8353	0/1:-655.133,0,-567.811:515:239:275:9975:8588:239,275	1/1:-1357.51,-137.415,0:481:2:476:16871:74	.	0/1:-521.851,0,-390.598:381:164:217:7687:5979	0/1:-414.133,0,-460.392:358:180:177:6485:6709:180,177	0/1:-451.188,0,-574.355:422:226:195:7088:8295	.	.	1/1:-1272.03,-131.55,0:439:0:437:15801:0:0,437	0/1:-132.981,0,-214.227:153:87:65:2171:3033:87,65	0/1:-183.953,0,-290.72:215:121:91:3006:4176	1/1:-1236.29,-125.831,0:419:0:418:15306:0	1/1:-614.736,-62.9153,0:209:0:209:7551:0:0,209	1/1:-1574.93,-163.76,0:545:0:544:19281:0:0,544	0/1:-557.618,0,-586.062:515:253:257:8848:8834	0/1:-547.71,0,-599.672:483:243:237:8437:8866:243,237	0/1:-354.137,0,-301.71:285:124:161:5573:4537	0/1:-649.791,0,-635.939:562:272:290:10169:9509	0/1:-399.884,0,-374.126:324:155:169:6063:5571	1/1:-820.973,-82.7411,0:287:1:286:10078:38	1/1:-1013.75,-105.059,0:351:0:349:12410:0	0/1:-337.931,0,-489.739:337:189:147:5289:6952	0/1:-324.205,0,-320.22:268:131:137:4855:4827	.	0/1:-378.496,0,-443.462:350:178:172:6159:6500
+chr1	228444565	.	T	A	14194.32	.	AB=0;ABP=0;AC=74;AF=1;AN=74;AO=636;CIGAR=1X;DP=23934;DPB=638;DPRA=0;EPP=7.9405;EPPR=0;GTI=0;LEN=1;MEANALT=2;MQM=29.9277;MQMR=0;NS=1;NUMALT=1;ODDS=886.288;PAIRED=0.995283;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=21498;QR=0;RO=0;RPL=430;RPP=174.324;RPPR=0;RPR=206;RUN=1;SAF=289;SAP=14.4959;SAR=347;SF=0,1,2,3,4,5,6,7,8,9,10,11,12,13,14,15,16,17,18,19,20,21,22,23,24,25,26,27,28,29,30,31,32,33,34,35,36;SRF=0;SRP=0;SRR=0;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	1/1:-1466.75,-191.455,0:638:0:636:21498:0:0,636	1/1:-579.634,-81.2781,0:272:0:270:8956:0	1/1:-1622.8,-218.074,0:748:2:734:23642:39	1/1:-1386.09,-182.849,0:621:1:610:20373:12:1,610	1/1:-1923.7,-254.972,0:847:0:847:28640:0	1/1:-1907.75,-248.499,0:832:1:828:27886:12:1,828	1/1:-1262.92,-169.781,0:570:0:564:18872:0:0,564	1/1:-2021.5,-261.524,0:882:2:876:29540:64	1/1:-1240.43,-167.373,0:561:0:556:18141:0	1/1:-1227.49,-164.611,0:560:2:552:17909:24:2,552	1/1:-1411.7,-191.584,0:656:1:639:20821:14:1,639	1/1:-1879.84,-246.785,0:832:1:823:26453:14	1/1:-2061.73,-280.101,0:944:1:933:31073:12:1,933	1/1:-1644.26,-213.373,0:724:1:712:23171:14	1/1:-1168.71,-150.962,0:513:2:508:16850:29	1/1:-1635.62,-215.875,0:756:3:736:24446:76	1/1:-1463.32,-192.784,0:656:1:643:21358:12:1,643	1/1:-1780.76,-237.666,0:803:1:793:26038:15	1/1:-1041.17,-139.791,0:478:2:471:15011:30	1/1:-1455.29,-198.486,0:676:2:663:21264:26	1/1:-1715.76,-231.022,0:784:1:771:25970:16:1,771	1/1:-407.026,-57.1957,0:192:0:190:6018:0:0,190	1/1:-733.099,-98.7378,0:329:0:328:10249:0	1/1:-1793.21,-233.48,0:780:1:779:26794:14	1/1:-799.112,-104.758,0:351:0:348:11718:0:0,348	1/1:-2139.48,-282.288,0:953:2:944:31117:28:2,944	1/1:-1690.84,-229.63,0:784:2:768:23872:27	1/1:-1778.4,-228.282,0:772:2:764:24936:26:2,764	1/1:-865.904,-133.657,0:453:0:444:13376:0	1/1:-2062.96,-274.966,0:927:1:916:29412:12	1/1:-1376.5,-187.843,0:630:0:624:20329:0	1/1:-1032.83,-134.56,0:449:0:447:14395:0	1/1:-1528.63,-202.894,0:682:0:674:22168:0	1/1:-1545.46,-205.302,0:684:0:682:22601:0	1/1:-1229.02,-165.567,0:554:0:550:17657:0	1/1:-911.519,-118.004,0:392:0:392:13181:0	1/1:-1464.14,-193.562,0:649:0:643:20775:0
+chr1	228447463	.	G	A	1950.62	.	AB=0.496503;ABP=3.02549;AC=2;AF=0.5;AN=4;AO=71;CIGAR=1X;DP=342;DPB=143;DPRA=0;EPP=5.48761;EPPR=6.02623;GTI=0;LEN=1;MEANALT=1;MQM=38.8028;MQMR=38.7639;NS=1;NUMALT=1;ODDS=339.371;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2490;QR=2578;RO=72;RPL=56;RPP=54.4222;RPPR=61.3988;RPR=15;RUN=1;SAF=16;SAP=49.5287;SAR=55;SF=24,34;SRF=19;SRP=37.8745;SRR=53;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-163.16,0,-170.79:143:72:71:2490:2578:72,71	.	.	.	.	.	.	.	.	.	0/1:-262.111,0,-221.326:199:93:106:3943:3286	.	.
+chr1	228451826	.	C	T	2794.73	.	AB=0.568807;ABP=7.4927;AC=12;AF=0.5;AN=18;AO=62;CIGAR=1X;DP=1992;DPB=109;DPRA=0;EPP=5.25182;EPPR=16.956;GTI=0;LEN=1;MEANALT=3;MQM=25.5484;MQMR=25.8;NS=1;NUMALT=1;ODDS=123.901;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=2146;QR=1694;RO=45;RPL=19;RPP=23.184;RPPR=33.1696;RPR=43;RUN=1;SAF=48;SAP=43.4978;SAR=14;SF=1,2,6,13,16,20,23,28,33;SRF=35;SRP=33.1696;SRR=10;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	0/1:-96.6348,0,-67.9158:109:45:62:2146:1694	1/1:-613.253,-78.4592,0:271:2:267:9151:28	.	.	.	1/1:-504.197,-60.3091,0:219:3:212:7472:62:3,212	.	.	.	.	.	.	0/1:-158.421,0,-297.533:247:144:102:3425:5245	.	.	0/1:-149.751,0,-248.374:203:113:90:3134:4143:113,90	.	.	.	0/1:-250.545,0,-292.784:297:147:148:5268:5305:147,148	.	.	1/1:-621.362,-76.5311,0:261:1:258:9302:16	.	.	.	.	0/1:-80.0346,0,-198.114:185:112:72:2391:4142	.	.	.	.	0/1:-191.159,0,-183.775:200:97:103:3662:3551	.	.	.
+chr1	228452016	.	G	C	7523.52	.	AB=0.470528;ABP=10.4339;AC=1;AF=0.5;AN=2;AO=463;CIGAR=1X;DP=984;DPB=984;DPRA=0;EPP=48.977;EPPR=69.563;GTI=0;LEN=1;MEANALT=2;MQM=28.1793;MQMR=33.7741;NS=1;NUMALT=1;ODDS=1732.35;PAIRED=0.987041;PAIREDR=0.990347;PAO=0;PQA=0;PQR=0;PRO=0;QA=16739;QR=19199;RO=518;RPL=283;RPP=52.7666;RPPR=121.326;RPR=180;RUN=1;SAF=213;SAP=9.43092;SAR=250;SF=17;SRF=261;SRP=3.07737;SRR=257;TYPE=snp	GT:GL:DP:RO:AO:QA:QR	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-771.178,0,-1156.41:984:518:463:16739:19199	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr1	228456398	.	G	A	6966.74	.	AB=0.533063;ABP=10.0463;AC=1;AF=0.5;AN=2;AO=395;CIGAR=1X;DP=741;DPB=741;DPRA=0;EPP=5.91842;EPPR=3.77633;GTI=0;LEN=1;MEANALT=2;MQM=28.7873;MQMR=34.3469;NS=1;NUMALT=1;ODDS=1604.15;PAIRED=0.946835;PAIREDR=0.900875;PAO=0;PQA=0;PQR=0;PRO=0;QA=14362;QR=12222;RO=343;RPL=202;RPP=3.45559;RPPR=15.8302;RPR=193;RUN=1;SAF=197;SAP=3.0158;SAR=198;SF=10;SRF=165;SRP=4.08021;SRR=178;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	0/1:-705.527,0,-722.996:741:343:395:14362:12222:343,395	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr1	228461097	.	C	G	6780.76	.	AB=0.47136;ABP=8.98055;AC=2;AF=0.5;AN=4;AO=395;CIGAR=1X;DP=1543;DPB=838;DPRA=0;EPP=10.5362;EPPR=13.8874;GTI=0;LEN=1;MEANALT=3;MQM=33.962;MQMR=34.1088;NS=1;NUMALT=1;ODDS=1756.9;PAIRED=0.992405;PAIREDR=0.988662;PAO=0;PQA=0;PQR=0;PRO=0;QA=13998;QR=15807;RO=441;RPL=120;RPP=135.085;RPPR=140.335;RPR=275;RUN=1;SAF=236;SAP=35.6044;SAR=159;SF=13,33;SRF=257;SRP=29.2502;SRR=184;TYPE=snp	GT:GL:DP:RO:AO:QA:QR	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-788.866,0,-934.221:838:441:395:13998:15807	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-628.588,0,-973.092:705:394:311:11240:14328	.	.	.
+chr1	228461129	.	A	G	12468.20	.	AB=0;ABP=0;AC=42;AF=1;AN=62;AO=763;CIGAR=1X;DP=25049;DPB=764;DPRA=0;EPP=29.788;EPPR=0;GTI=0;LEN=1;MEANALT=2;MQM=32.3067;MQMR=0;NS=1;NUMALT=1;ODDS=1062.35;PAIRED=0.996068;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=27782;QR=0;RO=0;RPL=383;RPP=3.03591;RPPR=0;RPR=380;RUN=1;SAF=400;SAP=6.90643;SAR=363;SF=0,1,2,3,4,5,6,8,9,11,12,13,15,16,17,20,21,22,23,24,25,26,27,28,29,30,31,32,33,34,36;SRF=0;SRP=0;SRR=0;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	1/1:-1999.67,-229.686,0:764:0:763:27782:0:0,763	1/1:-776.359,-97.2327,0:324:0:323:12048:0	1/1:-2280.61,-260.692,0:866:0:866:31092:0	0/1:-751.461,0,-1032.67:788:417:371:13585:15390:417,371	0/1:-1144.99,0,-1093.56:1018:472:545:20092:17494	0/1:-1041.92,0,-1307.99:1026:519:504:18265:19421:519,504	1/1:-1916.89,-214.391,0:721:1:719:26438:36:1,719	.	0/1:-659.241,0,-791.009:658:329:327:11898:12105	0/1:-798.071,0,-907.307:767:372:393:14516:13774:372,393	.	0/1:-995.85,0,-956.723:879:413:466:16610:14715	0/1:-1333.41,0,-1453.04:1269:601:668:24325:22157:601,668	1/1:-2344.74,-261.492,0:876:2:873:31107:41	.	0/1:-842.948,0,-1040.67:857:433:424:15428:15975	0/1:-782.19,0,-1193.11:878:481:396:14537:17729:481,396	0/1:-944.37,0,-1333.59:1005:534:469:17073:19835	.	.	1/1:-2915.01,-332.638,0:1108:0:1105:40136:0:0,1105	0/1:-239.209,0,-216.269:230:104:124:4367:3566:104,124	0/1:-344.672,0,-489.883:384:208:173:6197:7275	1/1:-2648.04,-303.497,0:1023:1:1018:37312:37	1/1:-1256.23,-140.28,0:466:0:466:17333:0:0,466	1/1:-3063.38,-335.84,0:1170:7:1161:41769:192:7,1161	0/1:-877.579,0,-1159:949:492:454:15883:17547	0/1:-1113.14,0,-1153.81:1018:486:530:19068:17611:486,530	0/1:-488.313,0,-725.2:593:314:277:9803:11119	0/1:-930.487,0,-1449.63:1071:596:475:16996:21391	0/1:-727.131,0,-789.657:703:337:365:13251:12221	1/1:-1434.72,-161.653,0:538:0:537:18914:0	1/1:-2113.34,-234.348,0:795:2:793:28971:75	0/1:-753.14,0,-972.115:744:394:350:12777:14439	0/1:-690.292,0,-945.721:735:384:351:12723:14087	.	0/1:-741.764,0,-1099.7:826:444:379:13700:16430
+chr1	228461187	.	T	C	8210.95	.	AB=0.422703;ABP=51.0151;AC=1;AF=0.5;AN=2;AO=391;CIGAR=1X;DP=925;DPB=925;DPRA=0;EPP=41.2693;EPPR=73.8637;GTI=0;LEN=1;MEANALT=1;MQM=37.4322;MQMR=35.8015;NS=1;NUMALT=1;ODDS=1890.64;PAIRED=0.98977;PAIREDR=0.988764;PAO=0;PQA=0;PQR=0;PRO=0;QA=13899;QR=18976;RO=534;RPL=245;RPP=57.4415;RPPR=152.915;RPR=146;RUN=1;SAF=171;SAP=16.3446;SAR=220;SF=4;SRF=246;SRP=10.1835;SRR=288;TYPE=snp	GT:GL:DP:RO:AO:QA:QR	.	.	.	.	0/1:-844.341,0,-1201.48:925:534:391:13899:18976	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr1	228461757	.	G	A	1771.72	.	AB=0;ABP=0;AC=19;AF=1;AN=32;AO=119;CIGAR=1X;DP=1951;DPB=120;DPRA=0;EPP=25.3637;EPPR=0;GTI=0;LEN=1;MEANALT=2;MQM=42;MQMR=0;NS=1;NUMALT=1;ODDS=169.574;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=4505;QR=0;RO=0;RPL=79;RPP=30.765;RPPR=0;RPR=40;RUN=1;SAF=52;SAP=7.11603;SAR=67;SF=0,1,3,4,8,9,11,15,20,21,22,24,26,32,34,36;SRF=0;SRP=0;SRR=0;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	1/1:-389.626,-35.8226,0:120:0:119:4505:0:0,119	0/1:-66.1145,0,-75.2929:55:29:26:952:1092	.	0/1:-180.223,0,-153.362:129:60:69:2554:2216:60,69	0/1:-200.863,0,-255.534:177:96:80:2929:3584	.	.	.	0/1:-156.412,0,-147.53:117:58:59:2214:2139	0/1:-140.241,0,-215.214:140:81:59:2099:2959:81,59	.	0/1:-248.544,0,-173.247:167:73:93:3444:2573	.	.	.	0/1:-187.933,0,-165.477:138:65:73:2649:2399	.	.	.	.	0/1:-268.205,0,-233.221:198:94:104:3800:3380:94,104	0/1:-26.3318,0,-111.214:54:40:13:486:1462:40,13	0/1:-73.6731,0,-68.1011:56:26:28:1034:970	.	1/1:-156.317,-15.0515,0:50:0:50:1797:0:0,50	.	0/1:-254.379,0,-249.75:203:98:105:3635:3592	.	.	.	.	.	1/1:-378.352,-34.6244,0:120:1:119:4382:15	.	0/1:-140.925,0,-153.103:116:60:56:2037:2155	.	0/1:-139.674,0,-133.883:111:54:56:2010:1938
+chr1	228464248	.	T	G	7473.06	.	AB=0;ABP=0;AC=42;AF=1;AN=62;AO=532;CIGAR=1X;DP=14239;DPB=534;DPRA=0;EPP=63.7625;EPPR=7.35324;GTI=0;LEN=1;MEANALT=1;MQM=39.9192;MQMR=21.5;NS=1;NUMALT=1;ODDS=733.9;PAIRED=0.986842;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=17737;QR=45;RO=2;RPL=215;RPP=45.4765;RPPR=7.35324;RPR=317;RUN=1;SAF=280;SAP=6.21036;SAR=252;SF=0,1,2,3,4,5,6,8,9,11,12,13,15,16,17,20,21,22,23,24,25,26,27,28,29,30,31,32,33,34,36;SRF=2;SRP=7.35324;SRR=0;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	1/1:-1499.17,-159.326,0:534:2:532:17737:45:2,532	1/1:-566.33,-59.6039,0:198:0:198:6605:0	1/1:-1173.2,-122.82,0:408:0:408:13855:0	0/1:-434.738,0,-511.146:417:215:197:6674:7462:215,197	0/1:-885.462,0,-542.385:636:258:375:12519:8578	0/1:-859.076,0,-731.995:704:324:373:12635:11000:324,373	1/1:-861.445,-82.6321,0:298:2:296:10358:78:2,296	.	0/1:-560.274,0,-413.283:435:184:249:8162:6363	0/1:-547.561,0,-474.64:458:216:237:8160:7182:216,237	.	0/1:-428.95,0,-614.081:497:276:217:6880:9024	0/1:-700.356,0,-854.123:658:354:302:10561:12288:354,302	1/1:-1139.58,-122.81,0:420:2:417:13459:41	.	0/1:-457.816,0,-687.176:510:292:216:7221:9793	0/1:-609.878,0,-673.033:566:294:266:9206:9863:294,266	0/1:-754.428,0,-432.586:526:199:323:10789:6872	.	.	1/1:-1931.33,-201.117,0:672:1:671:22866:12:1,671	0/1:-329.232,0,-59.2611:182:45:135:4466:1326:45,135	0/1:-193.658,0,-157.695:178:78:97:2922:2493	1/1:-1809.91,-191.325,0:638:1:637:21332:15	1/1:-564.477,-58.0988,0:194:0:193:6705:0:0,193	1/1:-1794.73,-193.562,0:644:0:643:21378:0:0,643	0/1:-441.667,0,-676.294:541:304:234:7241:9882	0/1:-373.353,0,-655.787:491:296:187:6219:9417:296,187	0/1:-297.885,0,-372.836:301:158:141:4515:5371	0/1:-577.661,0,-844.082:675:370:301:9422:12249	0/1:-428.502,0,-404.479:369:181:186:6416:6020	1/1:-786.299,-86.8485,0:294:1:291:9328:12	1/1:-1012.24,-105.078,0:356:1:355:11994:25	0/1:-559.126,0,-483.057:461:213:245:8279:7212	0/1:-428.763,0,-566.744:437:235:201:6599:8137	.	0/1:-577.573,0,-627.326:541:280:258:8617:9258
+chr1	228464255	.	T	C	3688.31	.	AB=0.397149;ABP=48.1247;AC=1;AF=0.5;AN=2;AO=195;CIGAR=1X;DP=491;DPB=491;DPRA=0;EPP=44.4464;EPPR=52.6735;GTI=0;LEN=1;MEANALT=3;MQM=38.159;MQMR=40.5034;NS=1;NUMALT=1;ODDS=849.265;PAIRED=0.984615;PAIREDR=0.986395;PAO=0;PQA=0;PQR=0;PRO=0;QA=6354;QR=9532;RO=294;RPL=79;RPP=18.2551;RPPR=10.5735;RPR=116;RUN=1;SAF=112;SAP=12.3755;SAR=83;SF=27;SRF=157;SRP=5.96468;SRR=137;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-386.128,0,-663.871:491:294:195:6354:9532:294,195	.	.	.	.	.	.	.	.	.
+chr1	228464276	.	T	C	7054.15	.	AB=0;ABP=0;AC=42;AF=1;AN=62;AO=491;CIGAR=1X;DP=13348;DPB=496;DPRA=0;EPP=19.4666;EPPR=0;GTI=0;LEN=1;MEANALT=2;MQM=40.1242;MQMR=0;NS=1;NUMALT=1;ODDS=685.276;PAIRED=0.99389;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=16704;QR=0;RO=0;RPL=310;RPP=76.606;RPPR=0;RPR=181;RUN=1;SAF=235;SAP=4.96064;SAR=256;SF=0,1,2,3,4,5,6,8,9,11,12,13,15,16,17,20,21,22,23,24,25,26,27,28,29,30,31,32,33,34,36;SRF=0;SRP=0;SRR=0;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	1/1:-1419.69,-147.806,0:496:0:491:16704:0:0,491	1/1:-561.035,-57.7978,0:196:0:192:6510:0	1/1:-1135.64,-116.8,0:393:0:388:13342:0	0/1:-388.819,0,-472.759:377:190:174:5925:6855:190,174	0/1:-823.795,0,-480.818:586:215:345:11552:7606	0/1:-738.879,0,-672.616:632:287:325:10903:10014:287,325	1/1:-828.113,-78.7561,0:287:2:282:9861:77:2,282	.	0/1:-545.233,0,-380.598:414:164:229:7844:5824	0/1:-519.729,0,-470.84:447:202:224:7706:7017:202,224	.	0/1:-434.434,0,-603.156:487:261:204:6811:8791	0/1:-657.703,0,-797.976:626:321:282:9862:11434:321,282	1/1:-1111.05,-120.713,0:410:0:401:13095:0	.	0/1:-436.488,0,-638.934:476:258:196:6727:9047	0/1:-537.3,0,-639.639:506:262:229:8099:9254:262,229	0/1:-706.779,0,-398.007:494:175:292:10082:6273	.	.	1/1:-1734.55,-181.823,0:616:1:605:20547:12:1,605	0/1:-348.517,0,-46.4641:169:33:132:4632:1098:33,132	0/1:-206.554,0,-142.728:157:63:90:3008:2239	1/1:-1662.71,-172.195,0:583:1:573:19566:12	1/1:-549.016,-55.0885,0:185:0:183:6490:0:0,183	1/1:-1664.31,-178.402,0:605:1:594:19726:26:1,594	0/1:-424.913,0,-643.012:517:275:212:6900:9293	0/1:-365.726,0,-631.536:471:267:180:5986:9013:267,180	0/1:-309.115,0,-389.346:304:158:136:4589:5517	0/1:-565.763,0,-764.329:634:324:276:9033:11095	0/1:-409.855,0,-369.476:342:155:172:6029:5482	1/1:-806.336,-87.2987,0:292:0:290:9485:0	1/1:-961.514,-98.7378,0:333:0:328:11325:0	0/1:-507.108,0,-450.446:427:189:220:7469:6627	0/1:-390.081,0,-511.25:405:207:171:5918:7270	.	0/1:-521.224,0,-542.966:481:228:223:7675:7975
+chr1	228464303	.	G	T	6888.09	.	AB=0.621868;ABP=59.6417;AC=1;AF=0.5;AN=2;AO=273;CIGAR=1X;DP=439;DPB=439;DPRA=0;EPP=43.107;EPPR=11.8532;GTI=0;LEN=1;MEANALT=1;MQM=40.0879;MQMR=41.2349;NS=1;NUMALT=1;ODDS=833.093;PAIRED=0.978022;PAIREDR=0.981928;PAO=0;PQA=0;PQR=0;PRO=0;QA=10004;QR=6029;RO=166;RPL=182;RPP=68.8783;RPPR=86.7297;RPR=91;RUN=1;SAF=125;SAP=7.21802;SAR=148;SF=17;SRF=67;SRP=16.4054;SRR=99;TYPE=snp	GT:GL:DP:RO:AO:QA:QR	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-713.036,0,-385.456:439:166:273:10004:6029	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr1	228464633	.	C	G	4260.09	.	AB=0.480556;ABP=4.19255;AC=1;AF=0.5;AN=2;AO=173;CIGAR=1X;DP=360;DPB=360;DPRA=0;EPP=38.2685;EPPR=43.4322;GTI=0;LEN=1;MEANALT=1;MQM=41.9884;MQMR=41.6952;NS=1;NUMALT=1;ODDS=980.922;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=6275;QR=6835;RO=187;RPL=87;RPP=3.02285;RPPR=8.13126;RPR=86;RUN=1;SAF=99;SAP=10.8552;SAR=74;SF=32;SRF=109;SRP=14.1696;SRR=78;TYPE=snp	GT:GL:DP:RO:AO:QA:QR	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-437.502,0,-483.648:360:187:173:6275:6835	.	.	.	.
+chr1	228464713	.	G	A	5560.29	.	AB=0.495726;ABP=3.08454;AC=1;AF=0.5;AN=2;AO=232;CIGAR=1X;DP=468;DPB=468;DPRA=0;EPP=4.35811;EPPR=5.40641;GTI=0;LEN=1;MEANALT=2;MQM=41.9655;MQMR=41.9138;NS=1;NUMALT=1;ODDS=1280.3;PAIRED=1;PAIREDR=0.99569;PAO=0;PQA=0;PQR=0;PRO=0;QA=8096;QR=8453;RO=232;RPL=103;RPP=9.33752;RPPR=6.75422;RPR=129;RUN=1;SAF=105;SAP=7.54044;SAR=127;SF=32;SRF=108;SRP=5.40641;SRR=124;TYPE=snp	GT:GL:DP:RO:AO:QA:QR	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-564.522,0,-594.967:468:232:232:8096:8453	.	.	.	.
+chr1	228464842	.	C	G	2903.32	.	AB=0;ABP=0;AC=42;AF=1;AN=62;AO=262;CIGAR=1X;DP=5020;DPB=262;DPRA=0;EPP=25.4212;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=41.9695;MQMR=0;NS=1;NUMALT=1;ODDS=367.814;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=9552;QR=0;RO=0;RPL=130;RPP=3.04345;RPPR=0;RPR=132;RUN=1;SAF=91;SAP=56.0539;SAR=171;SF=0,1,2,3,4,5,6,8,9,11,12,13,15,16,17,20,21,22,23,24,25,26,27,28,29,30,31,32,33,34,36;SRF=0;SRP=0;SRR=0;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	1/1:-829.638,-78.8699,0:262:0:262:9552:0:0,262	1/1:-86.8343,-8.12781,0:27:0:27:999:0	1/1:-420.845,-40.037,0:133:0:133:4897:0	0/1:-242.727,0,-335.711:227:128:98:3585:4672:128,98	0/1:-137.898,0,-202.924:132:76:56:2045:2795	0/1:-403.21,0,-373.92:305:147:158:5730:5374:147,158	1/1:-626.535,-60.8081,0:203:0:202:7231:0:0,202	.	0/1:-96.1036,0,-100.357:76:39:37:1369:1448	0/1:-271.403,0,-321.336:230:122:108:3926:4501:122,108	.	0/1:-185.081,0,-165.72:144:70:74:2623:2411	0/1:-477.164,0,-395.25:345:160:185:6717:5770:160,185	1/1:-306.425,-30.103,0:100:0:100:3536:0	.	0/1:-162.69,0,-178.052:136:70:66:2376:2535	0/1:-263.622,0,-291.869:216:112:103:3790:4121:112,103	0/1:-201.705,0,-171.267:146:68:78:2832:2478	.	.	1/1:-931.045,-89.4059,0:298:0:297:10794:0:0,297	0/1:-229.498,0,-77.4233:129:39:88:3094:1337:39,88	0/1:-52.6192,0,-57.9284:49:25:23:769:830	1/1:-315.937,-30.404,0:101:0:101:3633:0	1/1:-338.32,-32.2102,0:107:0:107:3885:0:0,107	1/1:-1052.34,-101.748,0:338:0:338:12137:0:0,338	0/1:-135.461,0,-166.802:125:67:58:1986:2346	0/1:-470.954,0,-385.282:345:158:187:6624:5608:158,187	0/1:-78.7211,0,-110.553:76:43:33:1166:1529	0/1:-230.312,0,-212.802:183:85:97:3317:3083	0/1:-161.04,0,-139.741:118:55:63:2299:2015	1/1:-203.246,-19.2659,0:64:0:64:2334:0	1/1:-336.489,-31.9092,0:107:0:106:3879:0	0/1:-95.4374,0,-129.687:90:51:39:1416:1799	0/1:-141.602,0,-111.47:102:46:55:1982:1642	.	0/1:-142.611,0,-125.621:106:51:55:2012:1820
+chr1	228465031	.	G	A	2137.35	.	AB=0.379061;ABP=38.2007;AC=1;AF=0.5;AN=2;AO=105;CIGAR=1X;DP=277;DPB=277;DPRA=0;EPP=10.476;EPPR=11.5447;GTI=0;LEN=1;MEANALT=1;MQM=41.4857;MQMR=41.7384;NS=1;NUMALT=1;ODDS=492.143;PAIRED=0.990476;PAIREDR=0.988372;PAO=0;PQA=0;PQR=0;PRO=0;QA=3673;QR=6042;RO=172;RPL=75;RPP=44.8887;RPPR=109.867;RPR=30;RUN=1;SAF=32;SAP=37.7745;SAR=73;SF=29;SRF=63;SRP=29.7245;SRR=109;TYPE=snp	GT:GL:DP:RO:AO:QA:QR	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-232.486,0,-442.145:277:172:105:3673:6042	.	.	.	.	.	.	.
+chr1	228465346	.	A	G	850.92	.	AB=0;ABP=0;AC=30;AF=1;AN=50;AO=62;CIGAR=1X;DP=1576;DPB=62;DPRA=0;EPP=8.05372;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=0;NS=1;NUMALT=1;ODDS=90.5554;PAIRED=0.967742;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=2205;QR=0;RO=0;RPL=21;RPP=17.0198;RPPR=0;RPR=41;RUN=1;SAF=42;SAP=19.9618;SAR=20;SF=0,1,3,4,5,8,9,11,12,13,15,17,20,21,22,24,25,26,27,29,30,31,32,34,36;SRF=0;SRP=0;SRR=0;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	1/1:-192.407,-18.6639,0:62:0:62:2205:0:0,62	0/1:-34.7758,0,-23.2191:23:9:14:489:345	.	0/1:-88.8422,0,-77.0303:64:30:34:1239:1108:30,34	0/1:-112.442,0,-109.478:86:42:44:1588:1560	0/1:-70.5917,0,-90.9461:64:35:29:1040:1267:35,29	.	.	0/1:-55.067,0,-108.169:66:42:24:857:1483	0/1:-91.5195,0,-85.1059:68:33:35:1286:1213:33,35	.	0/1:-88.784,0,-138.598:89:51:37:1334:1904	0/1:-68.0747,0,-161.287:89:59:30:1085:2164:59,30	0/1:-68.4259,0,-79.0424:59:30:29:1022:1112	.	0/1:-73.257,0,-79.2875:65:32:33:1065:1143	.	0/1:-108.429,0,-87.6158:77:35:41:1508:1272	.	.	0/1:-104.912,0,-114.479:89:46:43:1507:1652:46,43	0/1:-20.3061,0,-65.7747:34:24:10:347:886:24,10	0/1:-38.8557,0,-55.585:38:21:17:573:771	.	1/1:-123.892,-8.68775,0:41:1:40:1460:38:1,40	1/1:-270.327,-26.7917,0:89:0:89:3155:0:0,89	0/1:-77.4536,0,-102.04:72:39:33:1134:1423	0/1:-95.3472,0,-109.777:85:45:40:1408:1558:45,40	.	0/1:-108.579,0,-125.462:98:49:48:1587:1799	0/1:-29.7577,0,-56.9594:33:21:12:454:768	0/1:-49.4535,0,-30.6662:34:13:21:682:468	1/1:-177.983,-18.3628,0:61:0:61:2057:0	.	1/1:-108.025,-10.5361,0:35:0:35:1260:0	.	0/1:-101.081,0,-24.1912:55:15:40:1351:464
+chr1	228465370	.	T	G	1791.44	.	AB=0;ABP=0;AC=41;AF=1;AN=60;AO=96;CIGAR=1X;DP=3031;DPB=96;DPRA=0;EPP=4.45795;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=0;NS=1;NUMALT=1;ODDS=137.689;PAIRED=0.979167;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=3508;QR=0;RO=0;RPL=22;RPP=64.1734;RPPR=0;RPR=74;RUN=1;SAF=60;SAP=16.0391;SAR=36;SF=0,1,2,3,4,5,6,8,9,11,12,13,15,16,17,20,21,22,23,24,25,26,27,28,29,30,31,32,33,36;SRF=0;SRP=0;SRR=0;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	1/1:-305.214,-28.8989,0:96:0:96:3508:0:0,96	1/1:-120.569,-11.4391,0:38:0:38:1385:0	1/1:-317.193,-31.6126,0:110:1:108:3675:13	0/1:-135.249,0,-110.186:98:44:54:1891:1604:44,54	0/1:-205.835,0,-148.284:137:58:79:2841:2184	0/1:-137.759,0,-146.497:112:58:54:1985:2073:58,54	1/1:-210.629,-20.47,0:68:0:68:2416:0:0,68	.	0/1:-89.6427,0,-154.569:95:58:37:1356:2114	0/1:-153.1,0,-129.055:111:51:60:2139:1870:51,60	.	0/1:-127.444,0,-165.799:116:64:52:1865:2303	0/1:-136.781,0,-207.464:142:81:60:2085:2875:81,60	1/1:-290.742,-28.5979,0:95:0:95:3368:0	.	0/1:-157.001,0,-105.213:109:44:65:2216:1596	0/1:-161.042,0,-143.301:119:58:61:2266:2096:58,61	0/1:-196.513,0,-135.236:134:56:78:2718:2029	.	.	1/1:-415.377,-41.5421,0:138:0:138:4826:0:0,138	0/1:-91.3074,0,-22.2094:48:13:35:1225:416:13,35	0/1:-66.3703,0,-65.5706:55:28:27:960:939	1/1:-393.394,-37.9298,0:126:0:126:4526:0	1/1:-182.302,-17.1587,0:57:0:57:2092:0:0,57	1/1:-457.103,-45.1545,0:151:0:150:5301:0:0,150	0/1:-163.682,0,-155.964:134:63:71:2343:2253	0/1:-137.914,0,-158.006:124:64:59:2035:2238:64,59	0/1:-71.2649,0,-65.6045:58:28:30:1021:964	0/1:-156.443,0,-160.899:133:68:65:2267:2304	0/1:-87.517,0,-84.3669:68:33:35:1236:1204	1/1:-169.41,-17.1587,0:57:0:57:1934:0	1/1:-274.895,-27.9958,0:93:0:93:3172:0	0/1:-142.281,0,-139.643:114:55:59:2033:1998	.	.	0/1:-162.551,0,-68.4319:95:31:64:2207:1112
+chr1	228465403	.	G	T	2057.93	.	AB=0.550562;ABP=6.96287;AC=1;AF=0.5;AN=2;AO=98;CIGAR=1X;DP=178;DPB=178;DPRA=0;EPP=17.989;EPPR=8.46682;GTI=0;LEN=1;MEANALT=2;MQM=41.6735;MQMR=41.4103;NS=1;NUMALT=1;ODDS=350.172;PAIRED=0.989796;PAIREDR=0.974359;PAO=0;PQA=0;PQR=0;PRO=0;QA=3159;QR=2512;RO=78;RPL=19;RPP=82.7787;RPPR=52.119;RPR=79;RUN=1;SAF=55;SAP=6.20103;SAR=43;SF=17;SRF=50;SRP=16.4846;SRR=28;TYPE=snp	GT:GL:DP:RO:AO:QA:QR	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-223.076,0,-165.924:178:78:98:3159:2512	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr1	228465585	.	G	A	3602.09	.	AB=0.677273;ABP=63.0614;AC=1;AF=0.5;AN=2;AO=149;CIGAR=1X;DP=220;DPB=220;DPRA=0;EPP=9.43728;EPPR=3.0103;GTI=0;LEN=1;MEANALT=2;MQM=41.9463;MQMR=42;NS=1;NUMALT=1;ODDS=304.596;PAIRED=0.993289;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=5415;QR=2561;RO=70;RPL=138;RPP=238.069;RPPR=107.365;RPR=11;RUN=1;SAF=53;SAP=29.957;SAR=96;SF=16;SRF=29;SRP=7.47733;SRR=41;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-404.217,0,-157.294:220:70:149:5415:2561:70,149	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr1	228466862	.	C	T	2199.76	.	AB=0.363636;ABP=20.7769;AC=3;AF=0.5;AN=6;AO=40;CIGAR=1X;DP=498;DPB=110;DPRA=0;EPP=8.43898;EPPR=18.0245;GTI=0;LEN=1;MEANALT=1;MQM=41.1;MQMR=42;NS=1;NUMALT=1;ODDS=182.566;PAIRED=0.975;PAIREDR=0.971429;PAO=0;PQA=0;PQR=0;PRO=0;QA=1403;QR=2521;RO=70;RPL=14;RPP=10.8276;RPPR=18.0245;RPR=26;RUN=1;SAF=25;SAP=8.43898;SAR=15;SF=24,33,34;SRF=42;SRP=9.09042;SRR=28;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-87.7845,0,-186.249:110:70:40:1403:2521:70,40	.	.	.	.	.	.	.	.	0/1:-332.543,0,-166.723:198:72:126:4524:2635	0/1:-274.135,0,-215.165:190:84:106:3829:3135	.	.
+chr1	228467095	.	T	C	1380.23	.	AB=0.4875;ABP=3.22745;AC=1;AF=0.5;AN=2;AO=78;CIGAR=1X;DP=160;DPB=160;DPRA=0;EPP=5.79424;EPPR=10.954;GTI=0;LEN=1;MEANALT=2;MQM=41.4487;MQMR=41.4684;NS=1;NUMALT=1;ODDS=317.809;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2246;QR=2455;RO=79;RPL=50;RPP=16.4846;RPPR=9.19487;RPR=28;RUN=1;SAF=18;SAP=52.119;SAR=60;SF=31;SRF=18;SRP=53.8337;SRR=61;TYPE=snp	GT:GL:DP:RO:AO:QA:QR	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-151.088,0,-167.533:160:79:78:2246:2455	.	.	.	.	.
+chr1	228467711	.	G	A	542.98	.	AB=0.214953;ABP=154.039;AC=1;AF=0.5;AN=2;AO=46;CIGAR=1X;DP=214;DPB=214;DPRA=0;EPP=12.2627;EPPR=8.18047;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=41.9881;NS=1;NUMALT=1;ODDS=125.025;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1652;QR=6013;RO=168;RPL=33;RPP=21.8927;RPPR=98.6068;RPR=13;RUN=1;SAF=23;SAP=3.0103;SAR=23;SF=21;SRF=85;SRP=3.062;SRR=83;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-79.1499,0,-458.835:214:168:46:1652:6013:168,46	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr1	228468179	.	A	C	3554.56	.	AB=0.516364;ABP=3.6499;AC=1;AF=0.5;AN=2;AO=142;CIGAR=1X;DP=275;DPB=275;DPRA=0;EPP=3.0103;EPPR=9.59052;GTI=0;LEN=1;MEANALT=2;MQM=41.8451;MQMR=41.4091;NS=1;NUMALT=1;ODDS=741.424;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=5160;QR=4834;RO=132;RPL=81;RPP=9.12712;RPPR=8.34028;RPR=61;RUN=1;SAF=52;SAP=25.092;SAR=90;SF=9;SRF=49;SRP=22.0271;SRR=83;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	0/1:-365.206,0,-331.965:275:132:142:5160:4834:132,142	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr1	228468244	.	G	A	1059.77	.	AB=0.298913;ABP=67.6352;AC=1;AF=0.5;AN=2;AO=55;CIGAR=1X;DP=184;DPB=184;DPRA=0;EPP=3.99733;EPPR=5.04711;GTI=0;LEN=1;MEANALT=1;MQM=41.9636;MQMR=41.9535;NS=1;NUMALT=1;ODDS=244.02;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=2018;QR=4574;RO=129;RPL=21;RPP=9.68264;RPPR=3.83512;RPR=34;RUN=1;SAF=23;SAP=6.20829;SAR=32;SF=21;SRF=63;SRP=3.1618;SRR=66;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-119.803,0,-342.677:184:129:55:2018:4574:129,55	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr1	228468458	.	G	A	3587.74	.	AB=0.731343;ABP=34.1563;AC=15;AF=0.5;AN=24;AO=49;CIGAR=1X;DP=2303;DPB=67;DPRA=0;EPP=3.40914;EPPR=15.074;GTI=0;LEN=1;MEANALT=1;MQM=41.9592;MQMR=42;NS=1;NUMALT=1;ODDS=46.1107;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1749;QR=599;RO=18;RPL=44;RPP=70.4146;RPPR=26.6552;RPR=5;RUN=1;SAF=18;SAP=10.4997;SAR=31;SF=1,2,6,10,13,16,20,21,23,28,31,33;SRF=12;SRP=7.35324;SRR=6;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	0/1:-132.039,0,-32.5396:67:18:49:1749:599	1/1:-875.804,-85.0858,0:297:3:291:10251:38	.	.	.	1/1:-710.771,-69.2369,0:230:0:230:8238:0:0,230	.	.	.	0/1:-289.171,0,-184.154:192:79:112:4023:2795:79,112	.	.	0/1:-354.252,0,-170.201:219:79:140:4865:2704	.	.	0/1:-265.265,0,-157.941:175:70:104:3671:2406:70,104	.	.	.	0/1:-481.572,0,-274.174:306:118:187:6649:4200:118,187	0/1:-56.1535,0,-182.764:103:72:30:995:2444:72,30	.	1/1:-816.427,-79.1709,0:263:0:263:9458:0	.	.	.	.	0/1:-243.035,0,-95.4115:150:51:98:3332:1596	.	.	0/1:-225.812,0,-104.817:134:47:87:3058:1663	.	0/1:-269.349,0,-151.281:167:65:101:3690:2306	.	.	.
+chr1	228469801	.	G	C	7448.72	.	AB=0.493443;ABP=3.23813;AC=4;AF=0.5;AN=8;AO=301;CIGAR=1X;DP=2390;DPB=610;DPRA=0;EPP=3.19065;EPPR=3.35464;GTI=0;LEN=1;MEANALT=1;MQM=41.7475;MQMR=41.9871;NS=1;NUMALT=1;ODDS=1737.4;PAIRED=0.983389;PAIREDR=0.996764;PAO=0;PQA=0;PQR=0;PRO=0;QA=11010;QR=11373;RO=309;RPL=187;RPP=41.4547;RPPR=19.8831;RPR=114;RUN=1;SAF=121;SAP=28.1229;SAR=180;SF=0,3,4,8;SRF=123;SRP=30.9021;SRR=186;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	0/1:-768.478,0,-803.148:610:309:301:11010:11373:309,301	.	.	0/1:-721.898,0,-688.824:541:267:274:10234:9832:267,274	0/1:-834.167,0,-888.491:675:345:330:11992:12709	.	.	.	0/1:-700.265,0,-758.592:564:293:271:10039:10708	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr1	228469870	.	C	T	955.61	.	AB=0.347518;ABP=31.4858;AC=1;AF=0.5;AN=2;AO=49;CIGAR=1X;DP=141;DPB=141;DPRA=0;EPP=3.05462;EPPR=13.5336;GTI=0;LEN=1;MEANALT=2;MQM=42;MQMR=41.978;NS=1;NUMALT=1;ODDS=220.037;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1740;QR=3209;RO=91;RPL=36;RPP=26.4533;RPPR=86.0751;RPR=13;RUN=1;SAF=11;SAP=35.3165;SAR=38;SF=21;SRF=19;SRP=70.0396;SRR=72;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-110.058,0,-237.791:141:91:49:1740:3209:91,49	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr1	228469903	.	AG	TT	495.57	.	AB=0.371429;ABP=13.0611;AC=1;AF=0.5;AN=2;AO=26;CIGAR=2X;DP=70;DPB=70;DPRA=0;EPP=15.0369;EPPR=12.6832;GTI=0;LEN=2;MEANALT=1;MQM=42;MQMR=41.9545;NS=1;NUMALT=1;ODDS=114.109;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=974;QR=1546;RO=44;RPL=22;RPP=30.0702;RPPR=53.5464;RPR=4;RUN=1;SAF=3;SAP=36.4176;SAR=23;SF=21;SRF=9;SRP=36.372;SRR=35;TYPE=complex	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-63.6534,0,-113.775:70:44:26:974:1546:44,26	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr1	228470995	.	G	T	4862.88	.	AB=0.457143;ABP=5.24381;AC=15;AF=0.5;AN=24;AO=64;CIGAR=1X;DP=3441;DPB=140;DPRA=0;EPP=9.66043;EPPR=14.4391;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=42;NS=1;NUMALT=1;ODDS=328.998;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=2328;QR=2856;RO=76;RPL=51;RPP=52.0041;RPPR=80.269;RPR=13;RUN=1;SAF=14;SAP=46.9826;SAR=50;SF=1,2,6,10,13,16,20,21,23,28,31,33;SRF=18;SRP=48.7255;SRR=58;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	0/1:-159.672,0,-204.916:140:76:64:2328:2856	1/1:-1198.02,-112.869,0:390:2:388:13914:49	.	.	.	1/1:-864.555,-81.2781,0:270:0:270:9985:0:0,270	.	.	.	0/1:-424.338,0,-404.085:316:155:161:6027:5787:155,161	.	.	0/1:-455.502,0,-488.92:371:189:181:6569:6929	.	.	0/1:-433.28,0,-400.801:317:154:163:6119:5750:154,163	.	.	.	0/1:-535.27,0,-486.337:398:192:206:7602:7025:192,206	0/1:-72.5171,0,-254.919:132:96:36:1308:3395:96,36	.	1/1:-1178.18,-105.677,0:368:2:365:13680:54	.	.	.	.	0/1:-325.816,0,-310.768:254:123:131:4640:4478	.	.	0/1:-280.057,0,-257.267:210:100:110:3960:3700	.	0/1:-313.909,0,-401.973:275:150:125:4580:5610	.	.	.
+chr1	228471379	.	G	C	10960.72	.	AB=0;ABP=0;AC=30;AF=1;AN=52;AO=662;CIGAR=1X;DP=19320;DPB=663;DPRA=0;EPP=7.74687;EPPR=0;GTI=0;LEN=1;MEANALT=2;MQM=41.9048;MQMR=0;NS=1;NUMALT=1;ODDS=922.332;PAIRED=0.990937;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=24134;QR=0;RO=0;RPL=388;RPP=45.6394;RPPR=0;RPR=274;RUN=1;SAF=286;SAP=29.5797;SAR=376;SF=0,1,3,4,5,8,9,11,12,13,15,17,20,21,22,24,25,26,27,29,30,31,32,33,34,36;SRF=0;SRP=0;SRR=0;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	1/1:-2092.91,-199.282,0:663:0:662:24134:0:0,662	0/1:-352.471,0,-344.811:273:134:139:5006:4924	.	0/1:-1009.46,0,-1025.56:810:404:399:14484:14641:404,399	0/1:-1377.97,0,-1290.07:1051:501:547:19581:18589	0/1:-1154.41,0,-1236.74:930:478:451:16561:17527:478,451	.	.	0/1:-839.77,0,-804.807:643:313:327:11899:11506	0/1:-979.686,0,-743.682:682:304:378:13724:10933:304,378	.	0/1:-1016.85,0,-998.321:830:411:419:14570:14372	0/1:-1461.28,0,-1284.04:1078:510:565:20587:18567:510,565	0/1:-1015.85,0,-905.981:760:360:398:14342:13089	.	0/1:-1062.31,0,-1024.05:836:409:426:15186:14738	.	0/1:-1115.84,0,-1356.87:962:515:444:16193:18992	.	.	0/1:-1351.14,0,-1155.24:981:455:525:18994:16758:455,525	0/1:-111.855,0,-678.271:322:251:70:2389:8935:251,70	0/1:-315.536,0,-387.891:284:153:131:4603:5440	.	1/1:-906.081,-85.198,0:288:1:287:10477:15:1,287	1/1:-3250.11,-308.969,0:1047:3:1044:37594:68:3,1044	0/1:-1111.83,0,-1171.54:949:483:464:16116:16767	0/1:-925.199,0,-1131.21:829:447:380:13556:15904:447,380	.	0/1:-1266.53,0,-1362.59:1091:561:526:18397:19470	0/1:-832.161,0,-880.388:666:337:329:11923:12465	0/1:-594.388,0,-588.197:470:232:238:8463:8396	1/1:-2121.53,-196.436,0:686:3:681:24552:107	0/1:-946.887,0,-922.93:730:359:369:13431:13169	0/1:-637.911,0,-920.604:602:343:258:9436:12707	.	0/1:-1010.07,0,-1145.91:857:454:401:14627:16180
+chr1	228474032	.	G	A	1445.71	.	AB=0.483871;ABP=3.36054;AC=1;AF=0.5;AN=2;AO=75;CIGAR=1X;DP=155;DPB=155;DPRA=0;EPP=27.3597;EPPR=9.09042;GTI=0;LEN=1;MEANALT=3;MQM=41.1333;MQMR=40.4286;NS=1;NUMALT=1;ODDS=330.601;PAIRED=0.973333;PAIREDR=0.857143;PAO=0;PQA=0;PQR=0;PRO=0;QA=2459;QR=2374;RO=70;RPL=61;RPP=66.9674;RPPR=23.9805;RPR=14;RUN=1;SAF=11;SAP=84.3392;SAR=64;SF=32;SRF=10;SRP=80.5629;SRR=60;TYPE=snp	GT:GL:DP:RO:AO:QA:QR	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-169.005,0,-161.032:155:70:75:2459:2374	.	.	.	.
+chr1	228475848	.	G	A	10767.42	.	AB=0.491639;ABP=3.19186;AC=15;AF=0.5;AN=24;AO=147;CIGAR=1X;DP=7557;DPB=299;DPRA=0;EPP=3.14325;EPPR=6.24594;GTI=0;LEN=1;MEANALT=2;MQM=38.9864;MQMR=40.9338;NS=1;NUMALT=1;ODDS=807.907;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=5480;QR=5484;RO=151;RPL=50;RPP=35.6415;RPPR=34.7771;RPR=97;RUN=1;SAF=77;SAP=3.73412;SAR=70;SF=1,2,6,10,13,16,20,21,23,28,31,33;SRF=68;SRP=6.24594;SRR=83;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	0/1:-361.147,0,-381.525:299:151:147:5480:5484	1/1:-2323.07,-229.314,0:783:4:778:28202:71	.	.	.	1/1:-1791.61,-172.726,0:594:4:590:22001:101:4,590	.	.	.	0/1:-1022.6,0,-917.689:795:381:412:15226:13602:381,412	.	.	0/1:-972.302,0,-724.403:702:313:388:14226:11064	.	.	0/1:-966.413,0,-1006.42:794:402:389:14482:14702:402,389	.	.	.	0/1:-948.417,0,-1048.46:826:427:397:14624:15281:427,397	0/1:-140.038,0,-511.81:265:195:70:2525:6854:195,70	.	1/1:-2613.64,-257.08,0:855:0:854:31744:0	.	.	.	.	0/1:-689.286,0,-591.327:532:247:284:10218:8780	.	.	0/1:-579.815,0,-601.415:490:242:247:8899:8692	.	0/1:-708.436,0,-778.025:622:321:298:10912:11447	.	.	.
+chr1	228476366	.	GA	TT	853.14	.	AB=0.217241;ABP=204.403;AC=1;AF=0.5;AN=2;AO=63;CIGAR=2X;DP=290;DPB=291;DPRA=0;EPP=3.872;EPPR=5.79944;GTI=0;LEN=2;MEANALT=2;MQM=42;MQMR=41.6889;NS=1;NUMALT=1;ODDS=196.442;PAIRED=0;PAIREDR=0;PAO=2;PQA=70;PQR=0;PRO=0;QA=2239;QR=8031;RO=225;RPL=33;RPP=3.32051;RPPR=12.2849;RPR=30;RUN=1;SAF=23;SAP=12.9715;SAR=40;SF=21;SRF=121;SRP=5.79944;SRR=104;TYPE=mnp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-113.657,0,-607.749:290:225:63:2239:8031:225,63	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr1	228476414	.	G	A	580.32	.	AB=0.195804;ABP=232.883;AC=1;AF=0.5;AN=2;AO=56;CIGAR=1X;DP=286;DPB=286;DPRA=0;EPP=5.49198;EPPR=3.04806;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=40.8174;NS=1;NUMALT=1;ODDS=133.623;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=2017;QR=8172;RO=230;RPL=33;RPP=6.88793;RPPR=3.16136;RPR=23;RUN=1;SAF=27;SAP=3.16541;SAR=29;SF=21;SRF=115;SRP=3.0103;SRR=115;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-89.4929,0,-615.433:286:230:56:2017:8172:230,56	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr1	228480282	.	A	G	5716.06	.	AB=0;ABP=0;AC=44;AF=1;AN=64;AO=503;CIGAR=1X;DP=16748;DPB=503;DPRA=0;EPP=3.04915;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=22.8807;MQMR=0;NS=1;NUMALT=1;ODDS=701.911;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=18078;QR=0;RO=0;RPL=279;RPP=16.0694;RPPR=0;RPR=224;RUN=1;SAF=292;SAP=31.3344;SAR=211;SF=0,1,2,3,4,5,6,8,9,10,11,12,13,15,16,17,20,21,22,23,24,25,26,27,28,29,30,31,32,33,34,36;SRF=0;SRP=0;SRR=0;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	1/1:-978.025,-151.418,0:503:0:503:18078:0:0,503	1/1:-452.539,-60.507,0:201:0:201:7360:0	1/1:-1101.58,-168.497,0:587:4:582:20868:119	0/1:-377.344,0,-534.244:535:255:278:10102:9348:255,278	0/1:-353.489,0,-812.02:641:354:285:10400:13294	0/1:-420.629,0,-803.734:708:367:340:12371:13689:367,340	1/1:-1050.68,-160.449,0:533:0:533:19400:0:0,533	.	0/1:-325.917,0,-460.369:467:219:247:8847:8044	0/1:-301.618,0,-581.23:495:263:232:8318:9824:263,232	0/1:-425.311,0,-452.243:515:221:292:10619:8276:221,292	0/1:-397.353,0,-642.339:617:313:303:10756:11435	0/1:-517.543,0,-897.94:803:415:388:14145:15270:415,388	1/1:-1229.71,-192.279,0:640:2:638:22779:71	.	0/1:-395.995,0,-637.361:603:297:305:10973:11126	0/1:-370.107,0,-635.617:597:295:301:10947:10968:295,301	0/1:-417.725,0,-714.692:660:332:328:12096:12316	.	.	1/1:-1258.81,-196.548,0:664:1:663:24036:34:1,663	0/1:-83.457,0,-120.989:102:52:50:1671:1911:52,50	0/1:-97.1498,0,-233.222:189:112:77:2664:4100	1/1:-1214.29,-194.272,0:646:1:645:23508:16	1/1:-492.848,-72.5482,0:242:0:241:8757:0:0,241	1/1:-1344.2,-209.216,0:695:0:695:24788:0:0,695	0/1:-382.334,0,-542.354:581:278:302:10365:9877	0/1:-455.646,0,-684.5:694:331:363:12760:12165:331,363	0/1:-311.715,0,-433.628:382:185:195:6870:6844	0/1:-435.561,0,-712.577:687:349:337:12077:12674	0/1:-261.104,0,-450.781:411:209:202:7248:7726	1/1:-630.552,-94.9255,0:316:1:315:11269:37	1/1:-1011.13,-158.643,0:528:0:527:18877:0	1/1:-837.876,-132.007,0:449:3:445:16071:81	0/1:-308.299,0,-539.33:486:254:232:8460:9512	.	0/1:-353.908,0,-622.993:571:293:277:9953:10875
+chr1	228480441	.	G	A	5671.98	.	AB=0.466472;ABP=9.70831;AC=1;AF=0.5;AN=2;AO=320;CIGAR=1X;DP=686;DPB=686;DPRA=0;EPP=13.8677;EPPR=30.4444;GTI=0;LEN=1;MEANALT=1;MQM=31.2188;MQMR=35.041;NS=1;NUMALT=1;ODDS=1306.02;PAIRED=0.99375;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=11669;QR=13170;RO=366;RPL=238;RPP=168.151;RPPR=158.716;RPR=82;RUN=1;SAF=132;SAP=24.2907;SAR=188;SF=32;SRF=159;SRP=16.6799;SRR=207;TYPE=snp	GT:GL:DP:RO:AO:QA:QR	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-595.834,0,-816.1:686:366:320:11669:13170	.	.	.	.
+chr1	228481854	.	C	T	2163.52	.	AB=0.282511;ABP=94.6309;AC=2;AF=0.5;AN=4;AO=63;CIGAR=1X;DP=450;DPB=223;DPRA=0;EPP=4.69922;EPPR=8.43898;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=41.9875;NS=1;NUMALT=1;ODDS=260.754;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=2272;QR=5798;RO=160;RPL=26;RPP=7.18091;RPPR=3.49888;RPR=37;RUN=1;SAF=38;SAP=8.83536;SAR=25;SF=21,22;SRF=93;SRP=12.1848;SRR=67;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-130.101,0,-436.411:223:160:63:2272:5798:160,63	0/1:-330.551,0,-230.626:227:98:129:4705:3485	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr1	228481917	.	G	A	9116.69	.	AB=0.484277;ABP=5.05886;AC=1;AF=0.5;AN=2;AO=462;CIGAR=1X;DP=954;DPB=954;DPRA=0;EPP=7.24044;EPPR=37.3284;GTI=0;LEN=1;MEANALT=2;MQM=33.526;MQMR=35.0184;NS=1;NUMALT=1;ODDS=2099.2;PAIRED=0.997835;PAIREDR=0.997959;PAO=0;PQA=0;PQR=0;PRO=0;QA=16746;QR=17872;RO=490;RPL=172;RPP=68.4553;RPPR=87.4052;RPR=290;RUN=1;SAF=230;SAP=3.0291;SAR=232;SF=4;SRF=255;SRP=4.78293;SRR=235;TYPE=snp	GT:GL:DP:RO:AO:QA:QR	.	.	.	.	0/1:-926.755,0,-1071.11:954:490:462:16746:17872	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr1	228481940	.	C	T	5365.87	.	AB=0.476319;ABP=6.60983;AC=1;AF=0.5;AN=2;AO=352;CIGAR=1X;DP=739;DPB=739;DPRA=0;EPP=3.40511;EPPR=3.46479;GTI=0;LEN=1;MEANALT=1;MQM=27.4943;MQMR=34.8527;NS=1;NUMALT=1;ODDS=1235.54;PAIRED=0.994318;PAIREDR=0.992248;PAO=0;PQA=0;PQR=0;PRO=0;QA=12713;QR=14186;RO=387;RPL=83;RPP=216.431;RPPR=190.918;RPR=269;RUN=1;SAF=179;SAP=3.23238;SAR=173;SF=8;SRF=202;SRP=4.63189;SRR=185;TYPE=snp	GT:GL:DP:RO:AO:QA:QR	.	.	.	.	.	.	.	.	0/1:-567.051,0,-875.058:739:387:352:12713:14186	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr1	228482010	.	C	T	10006.27	.	AB=0.525672;ABP=5.35167;AC=24;AF=0.5;AN=36;AO=215;CIGAR=1X;DP=16975;DPB=409;DPRA=0;EPP=9.32272;EPPR=12.4725;GTI=0;LEN=1;MEANALT=2;MQM=26.7023;MQMR=31.8446;NS=1;NUMALT=1;ODDS=802.704;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=7860;QR=7036;RO=193;RPL=156;RPP=98.04;RPPR=88.1703;RPR=59;RUN=1;SAF=101;SAP=4.71718;SAR=114;SF=1,2,5,6,10,12,13,16,17,20,23,25,27,28,29,30,31,33;SRF=86;SRP=7.97206;SRR=107;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	0/1:-366.67,0,-382.103:409:193:215:7860:7036	1/1:-1951.63,-302.29,0:1020:3:1016:35850:66	.	.	0/1:-705.145,0,-1457.61:1237:673:562:20513:24536:673,562	1/1:-1707.05,-257.84,0:860:1:858:31127:35:1,858	.	.	.	0/1:-574.878,0,-853.758:889:441:444:16306:15852:441,444	.	0/1:-826.724,0,-1240.95:1236:601:628:22878:21551:601,628	1/1:-1599.88,-240.905,0:807:5:801:28424:156	.	.	0/1:-772.066,0,-957.268:997:454:542:19845:16503:454,542	0/1:-716.869,0,-1199.99:1120:564:554:19937:20254	.	.	0/1:-716.874,0,-946.575:1107:569:537:19433:20498:569,537	.	.	1/1:-2140.06,-334.143,0:1112:0:1110:40576:0	.	1/1:-2290.18,-341.007,0:1171:4:1160:41384:121:4,1160	.	0/1:-753.511,0,-1008:1030:501:528:18709:17906:501,528	0/1:-428.857,0,-670.798:579:299:275:9576:10435	0/1:-719.397,0,-1208.67:1156:607:542:18898:21255	0/1:-493.027,0,-949.705:828:455:372:13442:16176	1/1:-1146.64,-171.052,0:579:2:577:20446:52	.	0/1:-580.278,0,-660.938:838:406:432:15627:14806	.	.	.
+chr1	228482028	.	G	C	7032.22	.	AB=0;ABP=0;AC=20;AF=1;AN=34;AO=757;CIGAR=1X;DP=11750;DPB=758;DPRA=0;EPP=27.8202;EPPR=5.18177;GTI=0;LEN=1;MEANALT=1;MQM=26.148;MQMR=42;NS=1;NUMALT=1;ODDS=1042.45;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=27944;QR=38;RO=1;RPL=458;RPP=75.5294;RPPR=5.18177;RPR=299;RUN=1;SAF=356;SAP=8.81906;SAR=401;SF=0,1,3,4,8,9,11,15,20,21,22,24,26,32,33,34,36;SRF=1;SRP=5.18177;SRR=0;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	1/1:-1657.41,-224.526,0:758:1:757:27944:38:1,757	0/1:-347.547,0,-324.761:357:182:174:6467:6768	.	0/1:-581.769,0,-834.015:754:388:364:13480:14446:388,364	0/1:-915.711,0,-943.404:1029:478:551:20502:18063	.	.	.	0/1:-446.257,0,-692.571:619:331:287:10672:12264	0/1:-606.222,0,-794.238:743:371:371:13522:13945:371,371	.	0/1:-527.27,0,-1014.03:841:471:369:12848:17459	.	.	.	0/1:-559.132,0,-907.597:796:424:371:13235:15678	.	.	.	.	0/1:-850.725,0,-736.493:1023:511:512:19037:19166:511,512	0/1:-118.407,0,-352.168:216:142:74:2674:5113:142,74	0/1:-273.936,0,-450.625:387:214:172:6218:7867	.	1/1:-1199.78,-158.944,0:529:0:528:19379:0:0,528	.	0/1:-623.619,0,-798.596:808:402:402:13797:14629	.	.	.	.	.	1/1:-1694.04,-233.366,0:778:1:775:27948:36	0/1:-541.575,0,-478.77:698:348:349:12606:13056	0/1:-506.815,0,-659.21:627:305:321:11572:11552	.	0/1:-750.363,0,-685.64:787:346:441:16163:12915
+chr1	228482569	.	G	A	2967.78	.	AB=0.471204;ABP=5.76159;AC=4;AF=0.5;AN=8;AO=180;CIGAR=1X;DP=2098;DPB=382;DPRA=0;EPP=6.91895;EPPR=32.0779;GTI=0;LEN=1;MEANALT=1;MQM=22.7167;MQMR=31.401;NS=1;NUMALT=1;ODDS=505.152;PAIRED=0.994444;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=6477;QR=7208;RO=202;RPL=78;RPP=9.95901;RPPR=65.1015;RPR=102;RUN=1;SAF=97;SAP=5.37479;SAR=83;SF=18,19,34,36;SRF=96;SRP=4.08529;SRR=106;TYPE=snp	GT:GL:DP:RO:AO:QA:QR	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-228.045,0,-406.806:382:202:180:6477:7208	0/1:-311.148,0,-785.893:632:360:270:9775:12997	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-359.875,0,-515.929:536:255:278:10130:9152	.	0/1:-339.515,0,-527.52:548:273:273:9935:9601
+chr1	228486404	.	C	T	3914.99	.	AB=0;ABP=0;AC=19;AF=1;AN=32;AO=245;CIGAR=1X;DP=4336;DPB=246;DPRA=0;EPP=31.8067;EPPR=0;GTI=0;LEN=1;MEANALT=2;MQM=41.9755;MQMR=0;NS=1;NUMALT=1;ODDS=344.247;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=8990;QR=0;RO=0;RPL=164;RPP=64.0686;RPPR=0;RPR=81;RUN=1;SAF=70;SAP=100.727;SAR=175;SF=0,1,3,4,8,9,11,15,20,21,22,24,32,33,34,36;SRF=0;SRP=0;SRR=0;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	1/1:-778.599,-73.7524,0:246:0:245:8990:0:0,245	0/1:-179.553,0,-148.875:136:64:71:2541:2167	.	0/1:-413.386,0,-364.56:308:147:161:5841:5244:147,161	0/1:-483.499,0,-468.072:380:188:190:6948:6711	.	.	.	0/1:-324.178,0,-282.503:245:115:127:4596:4098	0/1:-426.887,0,-398.353:332:166:166:6085:5734:166,166	.	0/1:-521.269,0,-418.946:384:177:206:7351:6125	.	.	.	0/1:-426.818,0,-338.82:316:146:167:6028:4998	.	.	.	.	0/1:-519.645,0,-480.938:395:194:200:7375:6904:194,200	0/1:-49.3324,0,-293.046:149:118:31:1081:3864:118,31	0/1:-183.332,0,-198.521:160:85:75:2668:2836	.	1/1:-438.198,-39.4696,0:139:1:138:5099:36:1,138	.	.	.	.	.	.	.	1/1:-764.23,-73.3529,0:249:1:247:8835:15	0/1:-266.994,0,-360.347:253:141:112:3957:5001	0/1:-331.024,0,-342.358:277:142:133:4774:4890	.	0/1:-466.878,0,-425.571:367:180:186:6665:6173
+chr1	228491633	.	G	A	2834.93	.	AB=0.598425;ABP=13.6967;AC=4;AF=0.5;AN=8;AO=76;CIGAR=1X;DP=916;DPB=127;DPRA=0;EPP=19.4678;EPPR=6.45911;GTI=0;LEN=1;MEANALT=1;MQM=40.5658;MQMR=41.1373;NS=1;NUMALT=1;ODDS=269.517;PAIRED=1;PAIREDR=0.980392;PAO=0;PQA=0;PQR=0;PRO=0;QA=2781;QR=1923;RO=51;RPL=58;RPP=48.7255;RPPR=18.3809;RPR=18;RUN=1;SAF=32;SAP=7.12467;SAR=44;SF=24,32,33,34;SRF=18;SRP=12.5903;SRR=33;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-197.383,0,-126.011:127:51:76:2781:1923:51,76	.	.	.	.	.	.	.	0/1:-408.939,0,-364.849:302:143:158:5937:5387	0/1:-260.469,0,-325.939:232:126:106:3883:4635	0/1:-330.743,0,-316.961:255:124:130:4880:4648	.	.
+chr1	228492044	.	G	A	7568.52	.	AB=0.479042;ABP=3.64744;AC=26;AF=0.5;AN=40;AO=80;CIGAR=1X;DP=9163;DPB=167;DPRA=0;EPP=5.72464;EPPR=13.1102;GTI=0;LEN=1;MEANALT=2;MQM=42;MQMR=40.5698;NS=1;NUMALT=1;ODDS=466.13;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=3032;QR=3142;RO=86;RPL=45;RPP=5.72464;RPPR=9.47422;RPR=35;RUN=1;SAF=54;SAP=24.2907;SAR=26;SF=1,2,5,6,10,12,13,16,17,20,21,23,25,26,27,28,29,30,31,33;SRF=50;SRP=7.95924;SRR=36;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	0/1:-211.529,0,-218.136:167:86:80:3032:3142	1/1:-1383.31,-141.026,0:478:2:475:17147:29	.	.	0/1:-570.607,0,-649.424:505:270:235:8836:9772:270,235	1/1:-1162.18,-115.294,0:383:0:383:14128:0:0,383	.	.	.	0/1:-533.866,0,-602.786:480:253:227:8360:9103:253,227	.	0/1:-769.928,0,-865.164:676:352:323:12098:12871:352,323	1/1:-1338.46,-137.025,0:461:1:459:16666:16	.	.	0/1:-677.132,0,-661.609:544:264:280:10522:9798:264,280	0/1:-659.868,0,-830.523:616:333:282:10617:12332	.	.	0/1:-687.252,0,-655.204:553:270:281:10575:9964:270,281	0/1:-103.124,0,-370.053:192:141:51:1872:4998:141,51	.	1/1:-1524.27,-152.02,0:505:0:505:18865:0	.	1/1:-1969.01,-198.68,0:660:0:660:24395:0:0,660	0/1:-580.471,0,-585.498:528:263:262:9080:9186	0/1:-670.621,0,-588.838:537:255:280:10371:9062:255,280	0/1:-289.307,0,-414.454:291:168:123:4397:5860	0/1:-713.723,0,-720.146:620:308:311:11110:11125	0/1:-374.111,0,-430.255:336:176:159:5881:6500	1/1:-794.231,-81.5791,0:272:0:271:9993:0	.	0/1:-379.444,0,-503.324:359:196:163:6035:7243	.	.	.
+chr1	228492220	.	C	T	47.45	.	AB=0.154321;ABP=171.152;AC=1;AF=0.5;AN=2;AO=25;CIGAR=1X;DP=162;DPB=162;DPRA=0;EPP=5.18177;EPPR=11.395;GTI=0;LEN=1;MEANALT=1;MQM=41.2;MQMR=37.1314;NS=1;NUMALT=1;ODDS=10.9257;PAIRED=0;PAIREDR=0.00729927;PAO=0;PQA=0;PQR=0;PRO=0;QA=918;QR=4646;RO=137;RPL=5;RPP=22.5536;RPPR=18.2423;RPR=20;RUN=1;SAF=11;SAP=3.79203;SAR=14;SF=21;SRF=63;SRP=4.92817;SRR=74;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-31.0012,0,-334.84:162:137:25:918:4646:137,25	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr1	228494144	.	T	G	4521.75	.	AB=0.497253;ABP=3.03416;AC=1;AF=0.5;AN=2;AO=181;CIGAR=1X;DP=364;DPB=364;DPRA=0;EPP=6.47746;EPPR=3.30695;GTI=0;LEN=1;MEANALT=1;MQM=41.7901;MQMR=41.5847;NS=1;NUMALT=1;ODDS=1014.86;PAIRED=0.983425;PAIREDR=0.994536;PAO=0;PQA=0;PQR=0;PRO=0;QA=6637;QR=6456;RO=183;RPL=63;RPP=39.3015;RPPR=3.11709;RPR=118;RUN=1;SAF=105;SAP=13.0998;SAR=76;SF=19;SRF=104;SRP=10.4265;SRR=79;TYPE=snp	GT:GL:DP:RO:AO:QA:QR	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-464.258,0,-448.6:364:183:181:6637:6456	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr1	228494357	.	C	T	2768.85	.	AB=0;ABP=0;AC=19;AF=1;AN=32;AO=212;CIGAR=1X;DP=3082;DPB=213;DPRA=0;EPP=17.8009;EPPR=5.18177;GTI=0;LEN=1;MEANALT=1;MQM=41.9811;MQMR=40;NS=1;NUMALT=1;ODDS=293.383;PAIRED=0.985849;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=7806;QR=14;RO=1;RPL=176;RPP=203.769;RPPR=5.18177;RPR=36;RUN=1;SAF=61;SAP=85.9769;SAR=151;SF=0,1,3,4,8,9,11,15,20,21,22,24,32,33,34,36;SRF=1;SRP=5.18177;SRR=0;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	1/1:-675.358,-62.7204,0:213:1:212:7806:14:1,212	0/1:-99.0694,0,-112.334:81:42:39:1426:1578	.	0/1:-277.557,0,-283.861:216:109:107:3946:4016:109,107	0/1:-281.815,0,-333.175:244:130:114:4097:4677	.	.	.	0/1:-256.117,0,-265.86:204:103:101:3660:3785	0/1:-255.421,0,-254.106:202:99:103:3710:3635:99,103	.	0/1:-375.482,0,-330.735:288:138:149:5322:4856	.	.	.	0/1:-368.834,0,-280.063:257:112:144:5191:4157	.	.	.	.	0/1:-346.122,0,-353.621:279:142:137:4981:5048:142,137	0/1:-43.6031,0,-232.458:110:84:25:874:3051:84,25	0/1:-112.55,0,-159.913:109:61:47:1663:2209	.	1/1:-350.848,-29.0262,0:113:2:111:4104:54:2,111	.	.	.	.	.	.	.	1/1:-601.52,-57.2417,0:197:1:194:6993:16	0/1:-173.134,0,-284.579:177:105:72:2606:3892	0/1:-219.751,0,-246.097:181:95:86:3161:3456	.	0/1:-325.582,0,-222.172:211:90:121:4505:3301
+chr1	228494696	.	G	A	7528.69	.	AB=0;ABP=0;AC=19;AF=1;AN=32;AO=552;CIGAR=1X;DP=7557;DPB=552;DPRA=0;EPP=21.2003;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=41.7518;MQMR=0;NS=1;NUMALT=1;ODDS=769.84;PAIRED=0.992754;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=20335;QR=0;RO=0;RPL=210;RPP=71.5533;RPPR=0;RPR=342;RUN=1;SAF=282;SAP=3.57677;SAR=270;SF=0,1,3,4,8,9,11,15,20,21,22,24,32,33,34,36;SRF=0;SRP=0;SRR=0;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	1/1:-1757.32,-166.169,0:552:0:552:20335:0:0,552	0/1:-270.868,0,-305.324:224:119:105:3901:4278	.	0/1:-638.354,0,-584.765:477:231:246:9036:8370:231,246	0/1:-1023.31,0,-863.462:736:345:389:14379:12465	.	.	.	0/1:-653.825,0,-472.316:438:192:246:9066:6967	0/1:-686.635,0,-650.817:523:257:266:9771:9288:257,266	.	0/1:-686.979,0,-799.104:600:313:286:10065:11244	.	.	.	0/1:-713.154,0,-759.358:588:303:281:10284:10778	.	.	.	.	0/1:-858.173,0,-1000.22:726:386:340:12440:14018:386,340	0/1:-273.728,0,-296.042:232:120:112:3962:4248:120,112	0/1:-283.229,0,-260.858:220:106:114:4047:3740	.	1/1:-869.345,-75.9853,0:274:2:272:10117:70:2,272	.	.	.	.	.	.	.	1/1:-1660.49,-148.99,0:518:2:516:19292:76	0/1:-647.907,0,-572.021:478:229:249:9133:8231	0/1:-495.65,0,-549.672:409:212:195:7142:7737	.	0/1:-719.976,0,-698.849:562:281:280:10270:9995
+chr1	228494790	.	G	A	12945.07	.	AB=0.496403;ABP=3.04154;AC=26;AF=0.5;AN=40;AO=138;CIGAR=1X;DP=14206;DPB=278;DPRA=0;EPP=19.1233;EPPR=10.5174;GTI=0;LEN=1;MEANALT=1;MQM=41.8696;MQMR=42;NS=1;NUMALT=1;ODDS=799.769;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=5069;QR=5180;RO=140;RPL=73;RPP=4.01736;RPPR=11.9444;RPR=65;RUN=1;SAF=62;SAP=6.09442;SAR=76;SF=1,2,5,6,10,12,13,16,17,20,21,23,25,26,27,28,29,30,31,33;SRF=67;SRP=3.56868;SRR=73;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	0/1:-356.186,0,-365.111:278:140:138:5069:5180	1/1:-2546.15,-246.989,0:829:1:826:29425:27	.	.	0/1:-1153.47,0,-995.385:841:392:448:16233:14396:392,448	1/1:-1934.26,-181.975,0:615:1:614:22408:32:1,614	.	.	.	0/1:-781.456,0,-792.395:617:308:309:11157:11287:308,309	.	0/1:-1414.89,0,-1182.31:1017:466:550:19866:17221:466,550	1/1:-2212.42,-213.233,0:727:2:722:25652:54	.	.	0/1:-1134.01,0,-933.26:819:371:444:15931:13609:371,444	0/1:-1190.57,0,-1189.17:925:458:465:16950:17023	.	.	0/1:-1259.15,0,-1179.93:953:456:493:17835:16951:456,493	0/1:-145.513,0,-555.619:282:207:74:2675:7393:207,74	.	1/1:-2852.35,-269.226,0:911:2:907:32969:49	.	1/1:-2840.04,-273.881,0:916:1:913:32768:14:1,913	0/1:-960.46,0,-840.925:751:351:398:13735:12289	0/1:-934.916,0,-975.503:764:383:378:13476:13910:383,378	0/1:-501.573,0,-574.779:432:227:204:7287:8110	0/1:-1219.4,0,-1188.65:988:476:507:17583:17146	0/1:-736.517,0,-651.351:549:260:287:10369:9410	1/1:-1103.17,-103.097,0:355:1:353:12725:39	.	0/1:-823.31,0,-798.348:637:312:324:11698:11414	.	.	.
+chr1	228495177	.	C	T	1260.84	.	AB=0.392638;ABP=19.3296;AC=1;AF=0.5;AN=2;AO=64;CIGAR=1X;DP=163;DPB=163;DPRA=0;EPP=3.14602;EPPR=6.26751;GTI=0;LEN=1;MEANALT=3;MQM=41.9375;MQMR=41.9792;NS=1;NUMALT=1;ODDS=290.32;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=2132;QR=3297;RO=96;RPL=45;RPP=25.9465;RPPR=50.8732;RPR=19;RUN=1;SAF=20;SAP=22.5536;SAR=44;SF=28;SRF=37;SRP=13.9581;SRR=59;TYPE=snp	GT:GL:DP:RO:AO:QA:QR	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-137.99,0,-240.441:163:96:64:2132:3297	.	.	.	.	.	.	.	.
+chr1	228495983	.	G	A	10644.00	.	AB=0.537676;ABP=12.6641;AC=1;AF=0.5;AN=2;AO=421;CIGAR=1X;DP=783;DPB=783;DPRA=0;EPP=10.8555;EPPR=8.09723;GTI=0;LEN=1;MEANALT=2;MQM=41.6247;MQMR=41.2618;NS=1;NUMALT=1;ODDS=1980.28;PAIRED=0.988124;PAIREDR=0.961003;PAO=0;PQA=0;PQR=0;PRO=0;QA=15298;QR=13006;RO=359;RPL=279;RPP=99.8188;RPPR=119.877;RPR=142;RUN=1;SAF=181;SAP=20.9649;SAR=240;SF=5;SRF=139;SRP=42.6956;SRR=220;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	0/1:-1085.66,0,-885.228:783:359:421:15298:13006:359,421	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr1	228496013	.	C	T	4362.57	.	AB=0.513889;ABP=3.61349;AC=1;AF=0.5;AN=2;AO=185;CIGAR=1X;DP=360;DPB=360;DPRA=0;EPP=46.6862;EPPR=3.32051;GTI=0;LEN=1;MEANALT=1;MQM=41.5784;MQMR=41.0457;NS=1;NUMALT=1;ODDS=918.322;PAIRED=0.989189;PAIREDR=0.942857;PAO=0;PQA=0;PQR=0;PRO=0;QA=6499;QR=6084;RO=175;RPL=115;RPP=26.7791;RPPR=72.8076;RPR=70;RUN=1;SAF=73;SAP=20.8633;SAR=112;SF=9;SRF=67;SRP=23.8688;SRR=108;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	0/1:-451.992,0,-415.21:360:175:185:6499:6084:175,185	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr1	228496014	.	G	A	5406.79	.	AB=0;ABP=0;AC=19;AF=1;AN=32;AO=417;CIGAR=1X;DP=5585;DPB=419;DPRA=0;EPP=8.68112;EPPR=5.18177;GTI=0;LEN=1;MEANALT=2;MQM=41.8393;MQMR=42;NS=1;NUMALT=1;ODDS=574.4;PAIRED=0.995204;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=14791;QR=27;RO=1;RPL=280;RPP=109.496;RPPR=5.18177;RPR=137;RUN=1;SAF=158;SAP=56.1307;SAR=259;SF=0,1,3,4,8,9,11,15,20,21,22,24,32,33,34,36;SRF=1;SRP=5.18177;SRR=0;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	1/1:-1278.48,-123.346,0:419:1:417:14791:27:1,417	0/1:-231.898,0,-218.716:178:86:92:3285:3129	.	0/1:-499.613,0,-492.299:401:199:201:7210:7106:199,201	0/1:-712.144,0,-659.169:544:263:280:10131:9463	.	.	.	0/1:-394.775,0,-452.634:338:180:157:5721:6467	0/1:-388.537,0,-477.649:360:189:168:5805:6792:189,168	.	0/1:-580.984,0,-568.982:481:233:242:8370:8163	.	.	.	0/1:-608.506,0,-458.212:428:189:239:8499:6734	.	.	.	.	0/1:-593.918,0,-475.011:434:197:236:8474:7003:197,236	0/1:-33.315,0,-377.917:170:140:30:968:4907:140,30	0/1:-161.017,0,-209.755:162:86:75:2403:2953	.	1/1:-545.489,-41.6366,0:196:8:187:6454:192:8,187	.	.	.	.	.	.	.	1/1:-1261.38,-116.088,0:420:3:414:14676:107	0/1:-536.103,0,-355.436:356:148:208:7418:5330	0/1:-481.701,0,-225.831:285:103:182:6568:3630	.	0/1:-596.743,0,-428.223:413:177:232:8298:6363
+chr1	228497286	.	C	A	585.15	.	AB=0.282051;ABP=51.2838;AC=1;AF=0.5;AN=2;AO=33;CIGAR=1X;DP=117;DPB=117;DPRA=0;EPP=4.65535;EPPR=3.42391;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=41.9762;NS=1;NUMALT=1;ODDS=134.736;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1223;QR=3093;RO=84;RPL=19;RPP=4.65535;RPPR=13.3506;RPR=14;RUN=1;SAF=24;SAP=17.8158;SAR=9;SF=21;SRF=40;SRP=3.42391;SRR=44;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-70.9855,0,-233.896:117:84:33:1223:3093:84,33	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr1	228503677	.	A	G	12125.22	.	AB=0;ABP=0;AC=44;AF=1;AN=64;AO=575;CIGAR=1X;DP=21030;DPB=575;DPRA=0;EPP=60.1446;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=41.7896;MQMR=0;NS=1;NUMALT=1;ODDS=801.724;PAIRED=0.989565;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=20757;QR=0;RO=0;RPL=300;RPP=5.3706;RPPR=0;RPR=275;RUN=1;SAF=324;SAP=23.1351;SAR=251;SF=0,1,2,3,4,5,6,8,9,10,11,12,13,15,16,17,20,21,22,23,24,25,26,27,28,29,30,31,32,33,34,36;SRF=0;SRP=0;SRR=0;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	1/1:-1800.85,-173.092,0:575:0:575:20757:0:0,575	1/1:-886.762,-82.672,0:287:1:286:10277:39	1/1:-2171.28,-214.922,0:719:1:715:25029:14	0/1:-838.208,0,-768.775:651:314:335:11892:11196:314,335	0/1:-1028.42,0,-1112.1:863:446:416:14820:15806	0/1:-961.286,0,-1196.09:868:467:397:14063:16833:467,397	1/1:-1363.15,-129.506,0:441:1:440:15708:33:1,440	.	0/1:-737.843,0,-735.003:589:293:295:10550:10498	0/1:-629.309,0,-695:523:272:251:9041:9805:272,251	0/1:-775.141,0,-908.884:668:356:312:11244:12776:356,312	0/1:-906.127,0,-862.771:737:359:375:12946:12486	0/1:-1061.73,0,-1292.52:960:516:439:15634:18247:516,439	1/1:-2052.47,-202.292,0:673:0:672:23649:0	.	0/1:-931.463,0,-929.167:759:375:379:13461:13440	0/1:-822.587,0,-794.767:642:312:326:11670:11379:312,326	0/1:-941.402,0,-1123.66:826:440:383:13674:15833	.	.	1/1:-2623.44,-251.796,0:851:2:848:30286:45:2,848	0/1:-635.205,0,-69.2599:299:57:242:8309:1822:57,242	0/1:-341.214,0,-291.942:272:128:143:4842:4279	1/1:-2701.66,-259.488,0:863:0:862:31104:0	1/1:-814.276,-79.0148,0:267:1:266:9356:14:1,266	1/1:-3180.45,-316.684,0:1055:0:1052:36649:0:0,1052	0/1:-982.755,0,-1090.96:897:463:428:14410:15634	0/1:-1036.8,0,-1055.21:852:433:418:14872:15073:433,418	0/1:-502.307,0,-546.086:447:231:215:7304:7795	0/1:-1086.54,0,-1002.03:882:425:454:15553:14586	0/1:-730.566,0,-694.264:576:282:291:10509:9965	1/1:-1284.31,-122.922,0:425:2:423:14798:54	1/1:-1814.71,-175.051,0:592:1:591:20884:32	1/1:-1951.56,-188.065,0:633:1:632:22480:25	0/1:-782.714,0,-704.852:591:280:309:11053:10166	.	0/1:-801.792,0,-1044.87:747:406:339:11870:14612
+chr1	228503711	.	G	A	6290.89	.	AB=0.496;ABP=3.07979;AC=1;AF=0.5;AN=2;AO=248;CIGAR=1X;DP=500;DPB=500;DPRA=0;EPP=59.0483;EPPR=60.9507;GTI=0;LEN=1;MEANALT=1;MQM=41.879;MQMR=41.9841;NS=1;NUMALT=1;ODDS=1448.53;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=9224;QR=9374;RO=252;RPL=99;RPP=24.9001;RPPR=21.2438;RPR=149;RUN=1;SAF=99;SAP=24.9001;SAR=149;SF=6;SRF=106;SRP=16.7974;SRR=146;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	0/1:-646.502,0,-661.204:500:252:248:9224:9374:252,248	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr1	228504472	.	T	C	6240.71	.	AB=0;ABP=0;AC=44;AF=1;AN=64;AO=371;CIGAR=1X;DP=11790;DPB=375;DPRA=0;EPP=26.241;EPPR=3.0103;GTI=0;LEN=1;MEANALT=2;MQM=41.3639;MQMR=42;NS=1;NUMALT=1;ODDS=498.804;PAIRED=0.973046;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=12652;QR=71;RO=2;RPL=104;RPP=158.519;RPPR=7.35324;RPR=267;RUN=1;SAF=190;SAP=3.4844;SAR=181;SF=0,1,2,3,4,5,6,8,9,10,11,12,13,15,16,17,20,21,22,23,24,25,26,27,28,29,30,31,32,33,34,36;SRF=1;SRP=3.0103;SRR=1;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	1/1:-1088.34,-105.981,0:375:2:371:12652:71:2,371	1/1:-428.631,-43.6494,0:145:0:145:4918:0	1/1:-1146.16,-119.208,0:399:0:396:13237:0	0/1:-388.667,0,-400.998:334:170:162:5612:5833:170,162	0/1:-541.171,0,-620.606:494:262:228:7939:8854	0/1:-549.619,0,-579.581:473:240:230:7953:8395:240,230	1/1:-797.705,-80.676,0:269:0:268:9196:0:0,268	.	0/1:-403.087,0,-346.129:318:150:166:5743:5077	0/1:-343.08,0,-415.898:328:174:151:5073:5969:174,151	0/1:-482.22,0,-479.348:409:201:205:6936:6963:201,205	0/1:-475.333,0,-478.446:454:224:225:7044:7158	0/1:-592.03,0,-739.186:568:302:259:8779:10502:302,259	1/1:-1204.47,-127.848,0:429:1:426:13886:26	.	0/1:-434.023,0,-514.773:394:209:184:6390:7324	0/1:-424.947,0,-484.435:391:202:185:6282:6991:202,185	0/1:-511.609,0,-595.194:472:250:221:7574:8516	.	.	1/1:-1251.97,-130.949,0:439:1:436:14535:13:1,436	0/1:-296.638,0,-38.8155:147:29:117:3944:947:29,117	0/1:-162.843,0,-125.158:130:57:72:2315:1877	1/1:-1561.09,-151.97,0:521:2:519:18093:53	1/1:-429.105,-44.5524,0:148:0:148:4919:0:0,148	1/1:-1719.48,-177.57,0:594:1:591:19805:14:1,591	0/1:-399.013,0,-516.133:423:223:194:6006:7377	0/1:-484.451,0,-576.584:468:248:216:7221:8310:248,216	0/1:-294.766,0,-298.788:273:135:133:4329:4396	0/1:-665.898,0,-670.836:596:299:295:9696:9850	0/1:-391.848,0,-332.125:316:144:168:5583:4895	1/1:-506.801,-53.0364,0:181:1:180:5818:15	1/1:-1000.56,-101.513,0:358:2:356:11648:67	1/1:-932.467,-91.9783,0:328:2:325:10850:72	0/1:-292.64,0,-335.843:277:146:127:4334:4885	.	0/1:-350.286,0,-418.239:339:178:156:5176:5978
+chr1	228504591	.	C	A	4901.52	.	AB=0;ABP=0;AC=19;AF=1;AN=32;AO=409;CIGAR=1X;DP=5046;DPB=411;DPRA=0;EPP=3.44035;EPPR=7.35324;GTI=0;LEN=1;MEANALT=1;MQM=41.5012;MQMR=32.5;NS=1;NUMALT=1;ODDS=557.326;PAIRED=0.977995;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=14990;QR=46;RO=2;RPL=327;RPP=321.696;RPPR=7.35324;RPR=82;RUN=1;SAF=154;SAP=57.1697;SAR=255;SF=0,1,3,4,8,9,11,15,20,21,22,24,32,33,34,36;SRF=2;SRP=7.35324;SRR=0;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	1/1:-1286.71,-119.44,0:411:2:409:14990:46:2,409	0/1:-233.754,0,-219.28:177:86:91:3352:3131	.	0/1:-388.536,0,-298.506:281:130:150:5469:4482:130,150	0/1:-715.3,0,-621.927:530:251:279:10183:8975	.	.	.	0/1:-443.499,0,-351.48:320:147:173:6305:5216	0/1:-440.732,0,-301.286:309:137:172:6205:4638:137,172	.	0/1:-580.088,0,-357.488:384:155:228:8166:5433	.	.	.	0/1:-467.542,0,-406.451:362:172:188:6816:6029	.	.	.	.	0/1:-602.094,0,-527.704:459:217:240:8678:7725:217,240	0/1:-33.1207,0,-282.263:129:104:25:881:3692:104,25	0/1:-156.444,0,-141.783:118:57:61:2218:2055	.	1/1:-460.629,-43.9504,0:146:0:146:5307:0:0,146	.	.	.	.	.	.	.	1/1:-1065.87,-103.378,0:356:2:354:12714:40	0/1:-450.828,0,-428.603:358:173:185:6609:6222	0/1:-381.752,0,-333.837:289:137:151:5486:4908	.	0/1:-605.777,0,-419.528:417:182:235:8597:6333
+chr1	228504668	.	CG	CA	366.41	.	AB=0;ABP=0;AC=2;AF=1;AN=2;AO=15;CIGAR=1M1X;DP=17;DPB=17;DPRA=0;EPP=4.31318;EPPR=0;GTI=0;LEN=1;MEANALT=2;MQM=41.7333;MQMR=0;NS=1;NUMALT=1;ODDS=12.7799;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=488;QR=0;RO=0;RPL=15;RPP=35.5824;RPPR=0;RPR=0;RUN=1;SAF=6;SAP=4.31318;SAR=9;SF=24;SRF=0;SRP=0;SRR=0;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	1/1:-42.7881,-4.51545,0:17:0:15:488:0:0,15	.	.	.	.	.	.	.	.	.	.	.	.
+chr1	228504669	.	G	A	727.26	.	AB=0;ABP=0;AC=16;AF=1;AN=28;AO=81;CIGAR=1X;DP=676;DPB=81;DPRA=0;EPP=62.2298;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=40.679;MQMR=0;NS=1;NUMALT=1;ODDS=116.895;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=2720;QR=0;RO=0;RPL=78;RPP=153.807;RPPR=0;RPR=3;RUN=1;SAF=18;SAP=57.2971;SAR=63;SF=0,1,3,4,8,9,11,15,20,22,32,33,34,36;SRF=0;SRP=0;SRR=0;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	1/1:-233.36,-24.3834,0:81:0:81:2720:0:0,81	0/1:-44.0002,0,-29.4496:29:12:17:616:435	.	0/1:-45.7441,0,-9.25564:23:6:17:600:180:6,17	0/1:-155.796,0,-44.7502:85:23:61:2080:798	.	.	.	0/1:-75.5766,0,-47.1551:50:20:30:1060:707	0/1:-84.0504,0,-25.9911:48:14:34:1118:456:14,34	.	0/1:-76.7454,0,-0.735921:39:4:35:1061:138	.	.	.	0/1:-68.7454,0,-12.5188:35:8:27:933:259	.	.	.	.	0/1:-97.7038,0,-78.8936:72:32:40:1402:1177:32,40	.	0/1:-12.7194,0,-7.29264:8:3:5:168:107	.	.	.	.	.	.	.	.	.	1/1:-118.167,-12.6433,0:42:0:42:1408:0	0/1:-99.7125,0,-61.7181:66:26:40:1365:937	0/1:-68.5609,0,-6.6293:33:6:27:920:184	.	0/1:-109.397,0,-46.0487:65:22:43:1496:744
+chr1	228504670	.	C	T	537.80	.	AB=0.413793;ABP=4.88226;AC=25;AF=0.5;AN=38;AO=12;CIGAR=1X;DP=682;DPB=29;DPRA=0;EPP=29.068;EPPR=7.89611;GTI=0;LEN=1;MEANALT=2;MQM=41.8333;MQMR=40.625;NS=1;NUMALT=1;ODDS=32.9451;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=420;QR=582;RO=16;RPL=12;RPP=29.068;RPPR=37.7539;RPR=0;RUN=1;SAF=0;SAP=29.068;SAR=12;SF=1,2,5,6,10,12,13,16,17,20,23,25,26,27,28,29,30,31,33;SRF=5;SRP=7.89611;SRR=11;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	0/1:-28.0906,0,-40.9395:29:16:12:420:582	1/1:-57.1711,-6.32163,0:21:0:21:701:0	.	.	0/1:-60.2038,0,-41.6771:41:18:23:828:624:18,23	1/1:-37.0846,-3.61236,0:12:0:12:419:0:0,12	.	.	.	0/1:-87.4949,0,-20.2407:48:14:34:1168:420:14,34	.	0/1:-41.0264,0,-22.9697:28:12:16:565:382:12,16	1/1:-103.449,-10.235,0:34:0:34:1193:0	.	.	0/1:-61.6237,0,-30.2248:38:14:24:858:473:14,24	0/1:-17.5208,0,-36.4587:23:14:9:293:492	.	.	0/1:-77.2188,0,-100.528:72:40:32:1155:1437:40,32	.	.	1/1:-211.984,-21.6742,0:73:0:72:2512:0	.	1/1:-155.537,-15.6536,0:52:0:52:1795:0:0,52	0/1:-49.048,0,-7.21185:24:5:19:668:161	0/1:-44.1848,0,-17.2016:28:9:18:623:285:9,18	0/1:-17.4344,0,-23.4532:20:11:9:272:331	0/1:-77.8806,0,-31.4379:49:16:32:1084:525	0/1:-6.62409,0,-21.279:11:8:3:110:276	1/1:-49.3863,-4.81648,0:16:0:16:571:0	.	0/1:-55.2772,0,-100.578:63:39:24:850:1367	.	.	.
+chr1	228504700	.	AGC	AGCTCCC	60.36	.	AB=0.5;ABP=3.0103;AC=1;AF=0.5;AN=2;AO=5;CIGAR=2M4I1M;DP=10;DPB=20.6667;DPRA=0;EPP=3.44459;EPPR=3.0103;GTI=0;LEN=4;MEANALT=3;MQM=37.2;MQMR=42;NS=1;NUMALT=1;ODDS=0.535382;PAIRED=0.8;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=146;QR=66;RO=2;RPL=3;RPP=3.44459;RPPR=7.35324;RPR=2;RUN=1;SAF=2;SAP=3.44459;SAR=3;SF=17;SRF=1;SRP=3.0103;SRR=1;TYPE=ins	GT:GL:DP:RO:AO:QA:QR	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-9.90404,0,-3.7566:10:2:5:146:66	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr1	228504701	.	GCT	GCTCCCT	161.36	.	AB=0;ABP=0;AC=35;AF=1;AN=42;AO=11;CIGAR=1M4I2M;DP=192;DPB=25.6667;DPRA=0;EPP=4.78696;EPPR=0;GTI=0;LEN=4;MEANALT=1;MQM=35.6364;MQMR=0;NS=1;NUMALT=1;ODDS=19.8544;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=247;QR=0;RO=0;RPL=10;RPP=19.0002;RPPR=0;RPR=1;RUN=1;SAF=3;SAP=7.94546;SAR=8;SF=0,1,2,3,4,8,10,11,13,15,16,20,23,25,26,27,29,31,32,33,34;SRF=0;SRP=0;SRR=0;TYPE=ins	GT:GL:DP:RO:AO:QA:QR:AD	1/1:-21.3583,-3.31133,0:11:0:11:247:0:0,11	1/1:.,.,0:3:0:3:109:0	1/1:.,.,0:8:0:8:249:0	0/1:-10.7814,0,-4.17863:6:2:4:142:64:2,4	0/1:.,.,-13.3553:11:5:6:172:188	.	.	.	0/1:.,.,-8.07221:12:4:8:267:137	.	0/1:-20.372,0,-3.71142:10:2:8:267:73:2,8	1/1:.,.,0:14:0:14:308:0	.	1/1:.,.,0:10:0:9:295:0	.	1/1:.,.,0:2:0:2:72:0	0/1:-11.55,0,-4.62201:7:2:5:158:73:2,5	.	.	.	1/1:-40.1462,-4.51545,0:15:0:15:470:0:0,15	.	.	1/1:.,.,0:14:0:13:413:0	.	1/1:-42.9713,-4.51545,0:14:0:14:455:0:0,14	1/1:.,.,0:5:0:5:159:0	0/1:-17.1697,0,-2.49081:10:2:8:198:62:2,8	.	0/1:.,.,-1.48419:16:2:13:421:74	.	1/1:.,.,0:5:0:5:161:0	1/1:.,.,0:3:0:2:45:0	1/1:.,.,0:11:0:11:365:0	1/1:.,.,0:5:0:4:93:0	.	.
+chr1	228505204	.	G	A	3167.86	.	AB=0;ABP=0;AC=19;AF=1;AN=32;AO=198;CIGAR=1X;DP=3454;DPB=201;DPRA=0;EPP=6.56362;EPPR=0;GTI=0;LEN=1;MEANALT=3;MQM=41.6768;MQMR=0;NS=1;NUMALT=1;ODDS=279.091;PAIRED=0.969697;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=7248;QR=0;RO=0;RPL=82;RPP=15.6882;RPPR=0;RPR=116;RUN=1;SAF=114;SAP=12.8806;SAR=84;SF=0,1,3,4,8,9,11,15,20,21,22,24,32,33,34,36;SRF=0;SRP=0;SRR=0;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	1/1:-624.87,-59.6039,0:201:0:198:7248:0:0,198	0/1:-116.771,0,-93.6382:87:39:47:1641:1414	.	0/1:-282.752,0,-367.696:258:143:115:4164:5130:143,115	0/1:-443.012,0,-399.809:339:164:175:6324:5826	.	.	.	0/1:-291.583,0,-306.15:237:120:116:4200:4341	0/1:-325.026,0,-265.842:245:112:131:4636:3902:112,131	.	0/1:-388.493,0,-443.637:348:180:166:5823:6310	.	.	.	0/1:-318.29,0,-304.096:259:130:126:4577:4431	.	.	.	.	0/1:-416.019,0,-395.386:328:163:165:5988:5730:163,165	0/1:-94.2344,0,-122.731:93:52:41:1419:1728:52,41	0/1:-105.615,0,-124.997:102:54:48:1592:1817	.	1/1:-315.567,-27.0022,0:102:1:100:3682:38:1,100	.	.	.	.	.	.	.	1/1:-653.649,-62.6704,0:214:1:212:7633:16	0/1:-254.093,0,-264.077:205:103:101:3670:3750	0/1:-235.263,0,-212.667:183:90:93:3371:3075	.	0/1:-356.443,0,-262.285:253:110:138:5001:3887
+chr1	228505257	.	G	A	8096.45	.	AB=0.501773;ABP=3.0257;AC=2;AF=0.5;AN=4;AO=283;CIGAR=1X;DP=1308;DPB=564;DPRA=0;EPP=3.38628;EPPR=3.07985;GTI=0;LEN=1;MEANALT=1;MQM=40.9682;MQMR=39.6584;NS=1;NUMALT=1;ODDS=1524.58;PAIRED=0.961131;PAIREDR=0.907473;PAO=0;PQA=0;PQR=0;PRO=0;QA=10288;QR=10184;RO=281;RPL=64;RPP=187.355;RPPR=108.794;RPR=219;RUN=1;SAF=161;SAP=14.681;SAR=122;SF=8,29;SRF=149;SRP=5.24359;SRR=132;TYPE=snp	GT:GL:DP:RO:AO:QA:QR	.	.	.	.	.	.	.	.	0/1:-711.528,0,-680.656:564:281:283:10288:10184	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-966.975,0,-835.815:744:348:396:13861:12407	.	.	.	.	.	.	.
+chr1	228505574	.	C	T	3365.75	.	AB=0.49827;ABP=3.01781;AC=1;AF=0.5;AN=2;AO=144;CIGAR=1X;DP=289;DPB=289;DPRA=0;EPP=5.96592;EPPR=3.14508;GTI=0;LEN=1;MEANALT=1;MQM=41.4306;MQMR=41.7241;NS=1;NUMALT=1;ODDS=774.992;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=5124;QR=5330;RO=145;RPL=51;RPP=29.6108;RPPR=25.7883;RPR=93;RUN=1;SAF=110;SAP=90.1105;SAR=34;SF=10;SRF=106;SRP=70.2361;SRR=39;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	0/1:-355.509,0,-372.586:289:145:144:5124:5330:145,144	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr1	228505668	.	C	G	11035.23	.	AB=0;ABP=0;AC=44;AF=1;AN=64;AO=545;CIGAR=1X;DP=18354;DPB=545;DPRA=0;EPP=9.0705;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=41.7982;MQMR=0;NS=1;NUMALT=1;ODDS=760.136;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=20213;QR=0;RO=0;RPL=243;RPP=16.8798;RPPR=0;RPR=302;RUN=1;SAF=336;SAP=67.2739;SAR=209;SF=0,1,2,3,4,5,6,8,9,10,11,12,13,15,16,17,20,21,22,23,24,25,26,27,28,29,30,31,32,33,34,36;SRF=0;SRP=0;SRR=0;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	1/1:-1747.94,-164.061,0:545:0:545:20213:0:0,545	1/1:-658.048,-61.7112,0:205:0:205:7608:0	1/1:-1975.76,-186.657,0:626:1:624:22904:17	0/1:-649.482,0,-817.063:567:309:258:9606:11487:309,258	0/1:-940.586,0,-1008.01:756:386:368:13583:14322	0/1:-893.103,0,-826.202:670:324:345:12814:11914:324,345	1/1:-1376.64,-130.346,0:433:0:433:15976:0:0,433	.	0/1:-665.539,0,-661.299:513:252:259:9538:9429	0/1:-639.46,0,-653.375:496:247:247:9206:9313:247,247	0/1:-684.524,0,-755.196:555:287:268:9890:10706:287,268	0/1:-762.522,0,-853.857:630:326:304:11046:12049	0/1:-1094.88,0,-1084.97:844:421:423:15627:15554:421,423	1/1:-2043.49,-195.67,0:651:0:650:23779:0	.	0/1:-826.411,0,-806.8:652:318:330:11859:11675	0/1:-684.598,0,-867.771:594:325:269:10005:12173:325,269	0/1:-880.985,0,-905.968:692:348:342:12634:12926	.	.	1/1:-2032.76,-193.261,0:642:0:642:23561:0:0,642	0/1:-582.941,0,-144.011:287:71:216:7728:2658:71,216	0/1:-367.629,0,-363.446:283:139:143:5220:5180	1/1:-2260.7,-212.226,0:705:0:705:26133:0	1/1:-876.713,-82.4822,0:274:0:274:10135:0:0,274	1/1:-2827.76,-266.903,0:900:1:897:32841:39:1,897	0/1:-956.093,0,-784.189:704:322:380:13468:11581	0/1:-1118.1,0,-899.925:785:352:429:15716:13132:352,429	0/1:-544.839,0,-547.616:437:220:217:7827:7846	0/1:-1021.09,0,-988.572:805:395:409:14604:14275	0/1:-486.761,0,-799.637:490:295:195:7331:10975	1/1:-1102.62,-105.059,0:349:0:349:12720:0	1/1:-1662.55,-153.416,0:526:2:524:19404:54	1/1:-1740.6,-162.255,0:539:0:539:20150:0	0/1:-650.537,0,-744.448:535:278:256:9393:10478	.	0/1:-941.68,0,-782.252:664:306:358:13261:11397
+chr1	228505699	.	T	C	12959.56	.	AB=0;ABP=0;AC=44;AF=1;AN=64;AO=635;CIGAR=1X;DP=22176;DPB=636;DPRA=0;EPP=78.9298;EPPR=0;GTI=0;LEN=1;MEANALT=2;MQM=41.8016;MQMR=0;NS=1;NUMALT=1;ODDS=884.902;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=22700;QR=0;RO=0;RPL=335;RPP=7.19936;RPPR=0;RPR=300;RUN=1;SAF=324;SAP=3.58822;SAR=311;SF=0,1,2,3,4,5,6,8,9,10,11,12,13,15,16,17,20,21,22,23,24,25,26,27,28,29,30,31,32,33,34,36;SRF=0;SRP=0;SRR=0;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	1/1:-1971,-191.154,0:636:0:635:22700:0:0,635	1/1:-831.759,-77.2186,0:269:1:267:9612:39	1/1:-2303.05,-225.332,0:756:1:752:26620:15	0/1:-792.046,0,-840.831:660:335:322:11542:11986:335,322	0/1:-1142.84,0,-1118.5:922:450:466:16465:16091	0/1:-1016.36,0,-938.237:787:377:406:14548:13561:377,406	1/1:-1717.56,-165.265,0:550:0:549:19860:0:0,549	.	0/1:-658.881,0,-807.656:598:323:274:9701:11408	0/1:-661.225,0,-780.673:604:321:277:9719:11121:321,277	0/1:-797.111,0,-816.999:666:338:323:11508:11736:338,323	0/1:-917.263,0,-965.533:779:397:380:13266:13795	0/1:-1253.13,0,-1208.87:1002:492:500:17918:17425:492,500	1/1:-2352.51,-228.276,0:774:3:771:27245:68	.	0/1:-963.292,0,-934.232:793:387:399:13833:13552	0/1:-818.442,0,-884.705:683:355:325:11834:12612:355,325	0/1:-1113.78,0,-1009.85:851:408:439:15808:14615	.	.	1/1:-2341.77,-228.181,0:759:0:758:27048:0:0,758	0/1:-666.901,0,-134.863:339:82:255:8840:2706:82,255	0/1:-404.95,0,-402.742:341:170:170:5847:5813	1/1:-2654.78,-253.166,0:842:0:841:30590:0	1/1:-1152.94,-110.779,0:369:0:368:13264:0:0,368	1/1:-3345.51,-323.585,0:1102:3:1097:38691:85:3,1097	0/1:-1116.96,0,-880.527:853:380:466:15815:13143	0/1:-1296.57,0,-988.633:950:425:518:18204:14649:425,518	0/1:-667.507,0,-619.463:534:260:273:9528:8993	0/1:-1214.77,0,-1102.52:983:474:506:17375:16145	0/1:-570.718,0,-839.347:573:331:238:8528:11633	1/1:-1283.28,-126.287,0:427:1:423:14763:15	1/1:-1957.29,-187.106,0:640:2:638:22742:59	1/1:-2035.29,-196.874,0:654:0:654:23426:0	0/1:-776.539,0,-868.692:675:353:317:11290:12319	.	0/1:-1131.28,0,-856.059:805:358:443:15885:12697
+chr1	228505727	.	C	T	800.87	.	AB=0.204023;ABP=267.805;AC=1;AF=0.5;AN=2;AO=71;CIGAR=1X;DP=348;DPB=348;DPRA=0;EPP=28.7315;EPPR=43.107;GTI=0;LEN=1;MEANALT=2;MQM=41.9718;MQMR=41.978;NS=1;NUMALT=1;ODDS=184.408;PAIRED=0;PAIREDR=0.003663;PAO=0;PQA=0;PQR=0;PRO=0;QA=2538;QR=9585;RO=273;RPL=34;RPP=3.28556;RPPR=8.80885;RPR=37;RUN=1;SAF=33;SAP=3.7749;SAR=38;SF=21;SRF=116;SRP=16.3812;SRR=157;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-116.64,0,-731.725:348:273:71:2538:9585:273,71	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr1	228505739	.	G	A	9141.22	.	AB=0;ABP=0;AC=19;AF=1;AN=32;AO=647;CIGAR=1X;DP=9620;DPB=649;DPRA=0;EPP=94.3833;EPPR=3.0103;GTI=0;LEN=1;MEANALT=1;MQM=41.8145;MQMR=42;NS=1;NUMALT=1;ODDS=888.705;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=24130;QR=28;RO=2;RPL=282;RPP=26.1313;RPPR=7.35324;RPR=365;RUN=1;SAF=283;SAP=25.0304;SAR=364;SF=0,1,3,4,8,9,11,15,20,21,22,24,32,33,34,36;SRF=1;SRP=3.0103;SRR=1;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	1/1:-2080.67,-192.71,0:649:2:647:24130:28:2,647	0/1:-372.285,0,-323.717:267:125:142:5254:4649	.	0/1:-807.866,0,-833.681:647:324:320:11677:11837:324,320	0/1:-1078.15,0,-1120.47:863:437:425:15665:15883	.	.	.	0/1:-633.483,0,-806.934:565:308:256:9319:11245	0/1:-662.894,0,-891.288:614:340:272:9838:12418:340,272	.	0/1:-842.559,0,-1084.78:777:421:355:12501:15172	.	.	.	0/1:-879.539,0,-932.281:728:370:356:12778:13354	.	.	.	.	0/1:-1014.15,0,-936.522:770:371:398:14493:13458:371,398	0/1:-167.104,0,-672.272:335:248:87:3082:8873:248,87	0/1:-400.625,0,-470.753:349:184:163:5854:6610	.	1/1:-1234.79,-117.402,0:390:0:390:14264:0:0,390	.	.	.	.	.	.	.	1/1:-1957.68,-184.742,0:626:1:624:22787:38	0/1:-870.567,0,-762.186:641:306:335:12298:11049	0/1:-813.525,0,-832.258:644:322:321:11689:11817	.	0/1:-1037.35,0,-842.74:755:346:408:14701:12369
+chr1	228509427	.	A	G	12758.97	.	AB=0;ABP=0;AC=44;AF=1;AN=64;AO=610;CIGAR=1X;DP=22460;DPB=610;DPRA=0;EPP=10.5428;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=41.959;MQMR=0;NS=1;NUMALT=1;ODDS=850.245;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=21575;QR=0;RO=0;RPL=293;RPP=5.06074;RPPR=0;RPR=317;RUN=1;SAF=315;SAP=4.43422;SAR=295;SF=0,1,2,3,4,5,6,8,9,10,11,12,13,15,16,17,20,21,22,23,24,25,26,27,28,29,30,31,32,33,34,36;SRF=0;SRP=0;SRR=0;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	1/1:-1882.74,-183.628,0:610:0:610:21575:0:0,610	1/1:-679.633,-65.9256,0:219:0:219:7795:0	1/1:-2414.25,-246.845,0:825:0:820:27715:0	0/1:-845.456,0,-908.089:711:362:346:12142:12870:362,346	0/1:-1254.67,0,-1335.3:1040:527:510:17954:18953	0/1:-1221.24,0,-1240.76:992:494:495:17428:17687:494,495	1/1:-1662.31,-162.556,0:541:0:540:19034:0:0,540	.	0/1:-713.134,0,-782.612:608:314:293:10316:11108	0/1:-715.231,0,-953.156:675:371:303:10503:13282:371,303	0/1:-925.341,0,-968.038:764:387:377:13261:13790:387,377	0/1:-889.021,0,-860.629:743:361:378:12738:12415	0/1:-1404.06,0,-1337.85:1112:539:570:19998:19218:539,570	1/1:-1971.56,-198.485,0:670:2:666:22601:30	.	0/1:-942.862,0,-1068.77:813:421:389:13623:15160	0/1:-1024.74,0,-1025.17:823:410:412:14664:14657:410,412	0/1:-938.811,0,-1121.49:821:439:381:13609:15715	.	.	1/1:-2897.39,-282.121,0:943:1:941:33336:16:1,941	0/1:-562.129,0,-160.248:305:81:223:7469:2883:81,223	0/1:-309.885,0,-356.899:275:143:132:4482:5056	1/1:-2934.94,-282.24,0:954:2:951:33750:52	1/1:-1073.34,-104.156,0:347:0:346:12297:0:0,346	1/1:-3020.3,-303.223,0:1018:1:1016:34691:32:1,1016	0/1:-1092.99,0,-819.293:819:362:455:15361:12269	0/1:-928.881,0,-993.089:806:410:393:13458:14188:410,393	0/1:-597.116,0,-565.134:494:241:253:8540:8163	0/1:-1063.43,0,-1221.45:967:498:463:15509:17375	0/1:-832.708,0,-627.307:590:257:333:11568:9243	1/1:-1097.19,-109.246,0:373:2:371:12582:32	1/1:-1956.42,-194.766,0:648:0:647:22478:0	1/1:-1669.73,-162.646,0:551:1:549:19141:32	0/1:-773.99,0,-833.493:648:326:321:11124:11815	.	0/1:-808.607,0,-1026.97:755:405:345:11849:14388
+chr1	228520880	.	C	T	5646.89	.	AB=0.518405;ABP=3.96948;AC=18;AF=0.5;AN=30;AO=169;CIGAR=1X;DP=5204;DPB=326;DPRA=0;EPP=5.90131;EPPR=31.0181;GTI=0;LEN=1;MEANALT=1;MQM=41.6272;MQMR=41.4395;NS=1;NUMALT=1;ODDS=853.821;PAIRED=0.994083;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=6069;QR=5677;RO=157;RPL=50;RPP=64.1841;RPPR=68.8599;RPR=119;RUN=1;SAF=88;SAP=3.6399;SAR=81;SF=2,5,6,10,12,13,17,20,23,25,27,29,30,31,33;SRF=93;SRP=14.6422;SRR=64;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	0/1:-426.627,0,-388.604:326:157:169:6069:5677	.	.	0/1:-550.811,0,-395.901:373:161:212:7669:5857:161,212	1/1:-720.833,-68.3338,0:227:0:227:8362:0:0,227	.	.	.	0/1:-365.855,0,-447.367:317:172:145:5353:6269:172,145	.	0/1:-724.501,0,-516.713:490:211:275:10115:7722:211,275	1/1:-966.303,-89.0091,0:317:3:313:11282:69	.	.	.	0/1:-511.274,0,-493.691:389:191:198:7289:7043	.	.	0/1:-464.167,0,-430.328:348:168:180:6579:6173:168,180	.	.	0/1:-637.764,0,-445.681:418:180:238:8864:6600	.	1/1:-1464.09,-139.082,0:467:1:466:16935:15:1,466	.	0/1:-427.531,0,-573.845:394:218:176:6302:7996:218,176	.	0/1:-524.279,0,-564.349:436:223:211:7571:8084	0/1:-384.982,0,-300.628:266:118:147:5371:4392	0/1:-217.654,0,-207.452:172:85:87:3108:2980	.	0/1:-390.764,0,-292.612:264:117:147:5437:4288	.	.	.
+chr1	228520973	.	C	G	7168.48	.	AB=0.489362;ABP=3.42611;AC=18;AF=0.5;AN=30;AO=207;CIGAR=1X;DP=6568;DPB=423;DPRA=0;EPP=3.10471;EPPR=12.7163;GTI=0;LEN=1;MEANALT=2;MQM=41.9227;MQMR=41.4;NS=1;NUMALT=1;ODDS=1170.68;PAIRED=0.980676;PAIREDR=0.990698;PAO=0;PQA=0;PQR=0;PRO=0;QA=7413;QR=7814;RO=215;RPL=95;RPP=6.04197;RPPR=14.0091;RPR=112;RUN=1;SAF=116;SAP=9.56668;SAR=91;SF=2,5,6,10,12,13,17,20,23,25,27,29,30,31,33;SRF=124;SRP=14.0091;SRR=91;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	0/1:-516.598,0,-545.554:423:215:207:7413:7814	.	.	0/1:-649.443,0,-494.642:449:200:249:9095:7257:200,249	1/1:-860.472,-82.1812,0:274:0:273:9938:0:0,273	.	.	.	0/1:-496.568,0,-475.246:381:185:195:7082:6792:185,195	.	0/1:-834.283,0,-688.618:601:277:324:11727:10103:277,324	1/1:-1383.99,-129.338,0:453:3:449:16134:85	.	.	.	0/1:-596.507,0,-695.216:509:267:241:8676:9787	.	.	0/1:-537.297,0,-690.571:477:261:215:7863:9657:261,215	.	.	0/1:-714.057,0,-607.808:511:239:272:10020:8798	.	1/1:-1804.85,-175.199,0:583:0:582:20853:0:0,582	.	0/1:-512.307,0,-579.008:430:224:206:7458:8169:224,206	.	0/1:-641.103,0,-728.322:560:293:264:9427:10356	0/1:-489.158,0,-339.126:322:138:184:6750:5023	0/1:-340.349,0,-249.111:237:102:134:4742:3681	.	0/1:-513.527,0,-417.915:358:163:194:7160:6058	.	.	.
+chr1	228522483	.	C	T	2366.76	.	AB=0.537778;ABP=5.79944;AC=3;AF=0.5;AN=6;AO=121;CIGAR=1X;DP=575;DPB=225;DPRA=0;EPP=8.19671;EPPR=16.1867;GTI=0;LEN=1;MEANALT=2;MQM=42;MQMR=41.7864;NS=1;NUMALT=1;ODDS=550.315;PAIRED=0.991736;PAIREDR=0.990291;PAO=0;PQA=0;PQR=0;PRO=0;QA=4335;QR=3694;RO=103;RPL=34;RPP=53.4208;RPPR=25.9689;RPR=87;RUN=1;SAF=80;SAP=30.3062;SAR=41;SF=32,33,34;SRF=72;SRP=38.4496;SRR=31;TYPE=snp	GT:GL:DP:RO:AO:QA:QR	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-309.131,0,-253.14:225:103:121:4335:3694	0/1:-273.154,0,-202.841:195:85:109:3805:3003	0/1:-174.574,0,-215.379:155:83:72:2543:3011	.	.
+chr1	228523005	.	TGGGGGT	TGGGGGGT	329.63	.	AB=0;ABP=0;AC=10;AF=1;AN=12;AO=23;CIGAR=1M1I6M;DP=157;DPB=40.2857;DPRA=0;EPP=7.63648;EPPR=0;GTI=0;LEN=1;MEANALT=4;MQM=41.1739;MQMR=0;NS=1;NUMALT=1;ODDS=53.1255;PAIRED=0.913043;PAIREDR=0;PAO=6;PQA=195;PQR=195;PRO=6;QA=670;QR=0;RO=0;RPL=23;RPP=52.9542;RPPR=0;RPR=0;RUN=1;SAF=8;SAP=7.63648;SAR=15;SF=2,13,23,28,30,31;SRF=0;SRP=0;SRR=0;TYPE=ins	GT:GL:DP:RO:AO:QA:QR	.	.	1/1:-59.1969,-14.1484,0:31:0:23:670:0	.	.	.	.	.	.	.	.	.	.	1/1:-57.7781,-8.42884,0:34:0:20:658:0	.	.	.	.	.	.	.	.	.	1/1:-96.0226,-22.5772,0:47:0:35:1088:0	.	.	.	.	0/1:-8.54891,0,-5.67436:17:6:7:224:189	.	0/1:-11.6159,0,-4.75609:19:4:6:194:114	1/1:-16.0044,-2.40824,0:9:0:6:182:0	.	.	.	.	.
+chr1	228523011	.	T	G	43.49	.	AB=0.258065;ABP=18.771;AC=1;AF=0.5;AN=2;AO=8;CIGAR=1X;DP=31;DPB=31;DPRA=0;EPP=12.7819;EPPR=14.4341;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=40.3478;NS=1;NUMALT=1;ODDS=10.014;PAIRED=1;PAIREDR=0.956522;PAO=0;PQA=0;PQR=0;PRO=0;QA=262;QR=703;RO=23;RPL=8;RPP=20.3821;RPPR=52.9542;RPR=0;RUN=1;SAF=1;SAP=12.7819;SAR=7;SF=17;SRF=6;SRP=14.4341;SRR=17;TYPE=snp	GT:GL:DP:RO:AO:QA:QR	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-14.2025,0,-52.4736:31:23:8:262:703	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr1	228523448	.	G	A	9434.94	.	AB=0;ABP=0;AC=2;AF=1;AN=2;AO=316;CIGAR=1X;DP=324;DPB=324;DPRA=0;EPP=38.6334;EPPR=3.44459;GTI=0;LEN=1;MEANALT=3;MQM=41.5222;MQMR=42;NS=1;NUMALT=1;ODDS=395.888;PAIRED=0.993671;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=11334;QR=174;RO=5;RPL=107;RPP=74.504;RPPR=13.8677;RPR=209;RUN=1;SAF=201;SAP=53.8337;SAR=115;SF=13;SRF=2;SRP=3.44459;SRR=3;TYPE=snp	GT:GL:DP:RO:AO:QA:QR	.	.	.	.	.	.	.	.	.	.	.	.	.	1/1:-960.991,-81.2257,0:324:5:316:11334:174	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr1	228523618	.	G	A	4047.89	.	AB=0.511111;ABP=3.10681;AC=26;AF=0.5;AN=40;AO=46;CIGAR=1X;DP=4730;DPB=90;DPRA=0;EPP=4.70971;EPPR=7.94546;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=42;NS=1;NUMALT=1;ODDS=237.498;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1700;QR=1652;RO=44;RPL=38;RPP=45.4956;RPPR=60.0608;RPR=8;RUN=1;SAF=16;SAP=12.2627;SAR=30;SF=1,2,5,6,10,12,13,16,17,20,21,23,25,26,27,28,29,30,31,33;SRF=18;SRP=6.16881;SRR=26;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	0/1:-120.692,0,-116.081:90:44:46:1700:1652	1/1:-708.102,-68.3338,0:228:0:227:8192:0	.	.	0/1:-369.046,0,-398.548:299:154:144:5286:5627:154,144	1/1:-582.127,-54.7875,0:182:0:182:6719:0:0,182	.	.	.	0/1:-352.564,0,-276.056:246:111:134:4944:4045:111,134	.	0/1:-479.942,0,-459.627:364:179:185:6799:6557:179,185	1/1:-736.843,-71.6451,0:239:0:238:8514:0	.	.	0/1:-424.907,0,-284.742:272:113:157:5858:4225:113,157	0/1:-399.194,0,-328.763:283:130:151:5584:4763	.	.	0/1:-335.662,0,-347.92:271:134:133:4813:4939:134,133	0/1:-117.393,0,-130.085:99:52:47:1707:1848:52,47	.	1/1:-766.292,-71.3441,0:237:0:237:8857:0	.	1/1:-1050.41,-100.544,0:334:0:334:12103:0:0,334	0/1:-334.739,0,-335.163:277:136:140:4875:4802	0/1:-337.548,0,-343.456:273:134:139:4828:4905:134,139	0/1:-224.577,0,-193.826:169:82:86:3181:2808	0/1:-501.744,0,-436.24:374:178:196:7101:6330	0/1:-250.76,0,-237.19:192:94:98:3558:3409	1/1:-376.988,-32.0294,0:129:2:126:4412:73	.	0/1:-263.494,0,-174.041:172:72:99:3636:2610	.	.	.
+chr1	228524961	.	C	A	4863.89	.	AB=0.493197;ABP=3.12848;AC=18;AF=0.5;AN=30;AO=145;CIGAR=1X;DP=5499;DPB=294;DPRA=0;EPP=3.38469;EPPR=18.2423;GTI=0;LEN=1;MEANALT=2;MQM=40.8207;MQMR=40.5255;NS=1;NUMALT=1;ODDS=587.664;PAIRED=0.951724;PAIREDR=0.934307;PAO=0;PQA=0;PQR=0;PRO=0;QA=4562;QR=4068;RO=137;RPL=46;RPP=45.077;RPPR=27.1184;RPR=99;RUN=1;SAF=83;SAP=9.61457;SAR=62;SF=2,5,6,10,12,13,17,20,23,25,27,29,30,31,33;SRF=69;SRP=3.02615;SRR=68;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	0/1:-305.896,0,-266.046:294:137:145:4562:4068	.	.	0/1:-517.643,0,-504.25:458:222:231:7548:7448:222,231	1/1:-767.448,-82.2536,0:287:2:279:8852:26:2,279	.	.	.	0/1:-366.181,0,-404.777:373:190:176:5491:5938:190,176	.	0/1:-619.802,0,-592.562:551:263:278:9096:8751:263,278	1/1:-792.994,-91.2121,0:311:0:303:9184:0	.	.	.	0/1:-303.979,0,-364.092:321:170:143:4575:5303	.	.	0/1:-549.909,0,-586.254:494:234:253:8077:8450:234,253	.	.	0/1:-317.775,0,-325.251:310:152:151:4709:4819	.	1/1:-1445.42,-159.114,0:574:4:553:16764:97:4,553	.	0/1:-424.938,0,-537.644:469:254:211:6479:7863:254,211	.	0/1:-433.056,0,-396.083:435:204:220:6538:6043	0/1:-197.415,0,-254.527:219:117:97:3017:3671	0/1:-169.536,0,-148.39:153:74:76:2459:2237	.	0/1:-243.434,0,-262.465:250:124:119:3699:3862	.	.	.
+chr1	228525008	.	G	A	5948.37	.	AB=0;ABP=0;AC=15;AF=1;AN=28;AO=527;CIGAR=1X;DP=6818;DPB=535;DPRA=0;EPP=3.2122;EPPR=5.18177;GTI=0;LEN=1;MEANALT=3;MQM=41.6755;MQMR=42;NS=1;NUMALT=1;ODDS=701.226;PAIRED=0.996205;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=18260;QR=106;RO=4;RPL=206;RPP=57.5031;RPPR=3.0103;RPR=321;RUN=1;SAF=262;SAP=3.04738;SAR=265;SF=0,1,3,4,8,9,11,15,20,21,22,24,32,36;SRF=1;SRP=5.18177;SRR=3;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	1/1:-1575.73,-150.577,0:535:4:527:18260:106:4,527	0/1:-292.311,0,-210.376:202:87:115:4048:3166	.	0/1:-698.422,0,-701.379:566:277:289:10017:10076:277,289	0/1:-777.387,0,-1094.81:760:430:325:11530:15346	.	.	.	0/1:-545.452,0,-683.857:497:265:229:7968:9739	0/1:-590.042,0,-655.526:505:257:245:8491:9333:257,245	.	0/1:-716.062,0,-778.641:636:318:314:10411:11178	.	.	.	0/1:-701.122,0,-714.135:571:284:285:10078:10291	.	.	.	.	0/1:-739.937,0,-934.041:673:361:308:10857:13234:361,308	0/1:-92.2321,0,-547.161:258:200:58:1936:7202:200,58	0/1:-244.119,0,-356.729:247:140:107:3638:5018	.	0/1:-257.943,0,-355.818:249:140:109:3808:5093:140,109	.	.	.	.	.	.	.	0/1:-569.887,0,-585.571:466:231:235:8131:8419	.	.	.	0/1:-667.28,0,-917.427:653:363:288:9900:13050
+chr1	228525627	.	C	A	10258.48	.	AB=0.506912;ABP=3.28048;AC=18;AF=0.5;AN=30;AO=330;CIGAR=1X;DP=9693;DPB=651;DPRA=0;EPP=37.1222;EPPR=29.8594;GTI=0;LEN=1;MEANALT=1;MQM=41.797;MQMR=41.5576;NS=1;NUMALT=1;ODDS=1779;PAIRED=1;PAIREDR=0.971963;PAO=0;PQA=0;PQR=0;PRO=0;QA=11581;QR=11406;RO=321;RPL=120;RPP=56.3101;RPPR=86.3583;RPR=210;RUN=1;SAF=189;SAP=18.1711;SAR=141;SF=2,5,6,10,12,13,17,20,23,25,27,29,30,31,33;SRF=182;SRP=15.5183;SRR=139;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	0/1:-810.626,0,-792.623:651:321:330:11581:11406	.	.	0/1:-708.335,0,-823.552:613:322:287:10322:11608:322,287	1/1:-1578.77,-150.066,0:509:1:508:18191:32:1,508	.	.	.	0/1:-670.057,0,-508.9:481:214:266:9454:7523:214,266	.	0/1:-1080.21,0,-1132.98:893:452:441:15565:16148:452,441	1/1:-1986.38,-197.644,0:674:3:666:22888:42	.	.	.	0/1:-815.341,0,-922.858:689:360:326:11781:13018	.	.	0/1:-849.691,0,-936.792:720:375:343:12279:13311:375,343	.	.	0/1:-907.693,0,-873.053:711:348:362:12946:12534	.	1/1:-2530.26,-238.554,0:845:7:833:29329:162:7,833	.	0/1:-794.234,0,-803.618:656:324:331:11399:11572:324,331	.	0/1:-1066.59,0,-909.558:820:379:435:15184:13327	0/1:-761.873,0,-538.439:530:223:305:10616:8045	0/1:-495.253,0,-522.31:413:213:199:7128:7444	.	0/1:-629.119,0,-611.9:488:241:247:8930:8738	.	.	.
+chr1	228525823	.	C	T	3694.37	.	AB=0.463127;ABP=7.01375;AC=1;AF=0.5;AN=2;AO=157;CIGAR=1X;DP=339;DPB=339;DPRA=0;EPP=8.0033;EPPR=5.34881;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=41.989;NS=1;NUMALT=1;ODDS=850.66;PAIRED=1;PAIREDR=0.994505;PAO=0;PQA=0;PQR=0;PRO=0;QA=5569;QR=6307;RO=182;RPL=101;RPP=31.0181;RPPR=22.1002;RPR=56;RUN=1;SAF=63;SAP=16.3019;SAR=94;SF=14;SRF=75;SRP=15.2278;SRR=107;TYPE=snp	GT:GL:DP:RO:AO:QA:QR	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-381.439,0,-447.673:339:182:157:5569:6307	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr1	228526011	.	C	T	715.17	.	AB=0;ABP=0;AC=15;AF=1;AN=26;AO=57;CIGAR=1X;DP=661;DPB=57;DPRA=0;EPP=6.09608;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=0;NS=1;NUMALT=1;ODDS=83.6239;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=2163;QR=0;RO=0;RPL=30;RPP=3.35316;RPPR=0;RPR=27;RUN=1;SAF=15;SAP=30.7823;SAR=42;SF=0,1,3,4,8,11,15,20,21,22,24,32,36;SRF=0;SRP=0;SRR=0;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	1/1:-187.334,-17.1587,0:57:0:57:2163:0:0,57	0/1:-29.5664,0,-31.8987:23:12:11:418:442	.	0/1:-61.8383,0,-56.4318:48:23:24:875:819:23,24	0/1:-112.684,0,-76.6853:74:32:42:1553:1143	.	.	.	0/1:-40.287,0,-81.0611:48:30:18:628:1095	.	.	0/1:-144.663,0,-114.067:108:50:57:2037:1673	.	.	.	0/1:-76.0685,0,-48.9475:50:21:29:1059:732	.	.	.	.	0/1:-68.2409,0,-72.7272:60:31:29:1023:1065:31,29	0/1:-16.806,0,-66.495:33:24:9:303:873:24,9	0/1:-49.8383,0,-25.279:31:11:20:677:393	.	0/1:-33.3613,0,-30.5445:25:12:13:468:432:12,13	.	.	.	.	.	.	.	1/1:-120.819,-11.4391,0:39:0:38:1396:0	.	.	.	0/1:-82.1783,0,-83.6772:65:33:32:1171:1181
+chr1	228526619	.	G	A	669.54	.	AB=0.183007;ABP=136.549;AC=2;AF=0.5;AN=4;AO=28;CIGAR=1X;DP=267;DPB=153;DPRA=0;EPP=5.80219;EPPR=15.6743;GTI=0;LEN=1;MEANALT=1;MQM=41.9286;MQMR=41.68;NS=1;NUMALT=1;ODDS=37.1395;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=955;QR=4511;RO=125;RPL=9;RPP=10.7656;RPPR=4.41741;RPR=19;RUN=1;SAF=10;SAP=7.97367;SAR=18;SF=21,22;SRF=75;SRP=13.8677;SRR=50;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-37.6408,0,-342.729:153:125:28:955:4511:125,28	0/1:-124.682,0,-159.684:114:60:54:1880:2238	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr1	228526665	.	T	C	6011.73	.	AB=0.553719;ABP=6.04318;AC=26;AF=0.5;AN=40;AO=67;CIGAR=1X;DP=7100;DPB=121;DPRA=0;EPP=8.4876;EPPR=34.5369;GTI=0;LEN=1;MEANALT=1;MQM=41.6716;MQMR=41.1852;NS=1;NUMALT=1;ODDS=279.626;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=2452;QR=1954;RO=54;RPL=34;RPP=3.04271;RPPR=4.45795;RPR=33;RUN=1;SAF=39;SAP=6.93191;SAR=28;SF=1,2,5,6,10,12,13,16,17,20,21,23,25,26,27,28,29,30,31,33;SRF=23;SRP=5.5839;SRR=31;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	0/1:-176.008,0,-131.421:121:54:67:2452:1954	1/1:-943.628,-95.433,0:322:1:321:10945:15	.	.	0/1:-536.055,0,-589.221:447:229:218:7764:8361:229,218	1/1:-765.623,-75.2956,0:257:1:255:8891:19:1,255	.	.	.	0/1:-483.973,0,-436.421:367:175:192:6915:6335:175,192	.	0/1:-738.022,0,-620.981:552:253:296:10618:9227:253,296	1/1:-1058.56,-101.6,0:362:2:358:12326:77	.	.	0/1:-427.382,0,-569.443:400:217:181:6337:8005:217,181	0/1:-426.006,0,-541.92:386:204:179:6262:7607	.	.	0/1:-503.947,0,-601.297:444:234:207:7424:8503:234,207	0/1:-206.643,0,-145.738:141:61:78:2883:2164:61,78	.	1/1:-1262.63,-123.422,0:410:0:410:14631:0	.	1/1:-1639.17,-164.362,0:546:0:546:19067:0:0,546	0/1:-493.383,0,-544.321:449:228:217:7302:7866	0/1:-562.881,0,-501.389:438:208:226:8025:7303:208,226	0/1:-216.032,0,-342.695:231:136:95:3302:4763	0/1:-537.153,0,-696.945:519:280:236:8005:9841	0/1:-392.869,0,-249.804:265:108:155:5466:3795	1/1:-571.927,-56.5936,0:188:0:188:6603:0	.	0/1:-322.91,0,-306.79:255:123:129:4610:4476	.	.	.
+chr1	228526742	.	CCACACACACACACACACACACACACACACACACACGTCCAT	CCACACACACACACACACACACACACACACACACACACACACGTCCAT,CCACACACACACACACACACACACACACACACACGTCCAT,CCACACACACACACACACACACACACACACACGTCCAT,CCACACACACACACACACACACACACACACACACACACGTCCAT,CCACACACACACACACACACACACACACACACACACACACGTCCAT	289.28	.	AB=0;ABP=0;AC=9,4,1,4,4;AF=1;AN=26;AO=11;CIGAR=1M6I41M;DP=614;DPB=50.2381;DPRA=0;EPP=12.6832;EPPR=0;GTI=0;LEN=6;MEANALT=13;MQM=40.9091;MQMR=0;NS=1;NUMALT=1;ODDS=7.74136;PAIRED=1;PAIREDR=0;PAO=1.03333;PQA=14.6;PQR=12;PRO=0.833333;QA=278;QR=0;RO=0;RPL=11;RPP=26.8965;RPPR=0;RPR=0;RUN=1;SAF=2;SAP=12.6832;SAR=9;SF=0,3,5,6,9,12,16,20,21,24,25,27,31;SRF=0;SRP=0;SRR=0;TYPE=ins	GT:GL:DP:RO:AO:QA:QR:AD	1/1:-21.4885,-13.8474,0,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.:44:0:11,.,.,.,.:278,.,.,.,.:0:0,11	.	.	0/4:.,.,.,.,.,.,.,.,.,.,.,.,.,.,-5.09023,.,.,.,.,.,.:43:7:.,.,.,20,.:.,.,.,583,.:256:7,20	.	4/5:.,.,.,.,.,.,.,.,.,.,.,.,.,.,-17.4322,.,.,.,.,0,-48.7092:60:5:.,.,.,24,11:.,.,.,699,343:183:5,24,11	5/1:-41.8499,-19.832,-13.1253,.,.,.,.,.,.,.,.,.,.,.,.,-29.0945,0,.,.,.,-24.1933:42:1:16,.,.,.,10:417,.,.,.,293:37:1,10,16	.	.	0/4:.,.,.,.,.,.,.,.,.,.,.,.,.,.,-22.6867,.,.,.,.,.,.:53:11:.,.,.,13,.:.,.,.,424,.:387:11,13	.	.	4/5:.,.,.,.,.,.,.,.,.,.,.,.,.,.,-9.38865,.,.,.,.,0,-37.7543:69:7:.,.,.,22,11:.,.,.,624,306:260:7,22,11	.	.	.	0/2:.,.,.,.,.,-25.2256,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.:45:11:.,23,.,.,.:.,747,.,.,.:407:11,23	.	.	.	1/1:-45.5841,-26.1896,0,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.:43:0:21,.,.,.,.:544,.,.,.,.:0:0,21	2/3:-18.2434,.,.,-2.72174,.,-8.5083,-8.23399,.,0,-15.2239,.,.,.,.,.,.,.,.,.,.,.:23:3:.,8,4,.,.:.,212,138,.,.:103:3,8,4	.	.	5/1:.,.,-22.2799,.,.,.,.,.,.,.,.,.,.,.,.,.,0,.,.,.,-6.93984:25:0:6,.,.,.,14:130,.,.,.,336:0:0,14,6	1/1:-75.0085,-24.1675,0,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.:65:1:35,.,.,.,.:898,.,.,.,.:37:1,35	.	0/1:.,.,-57.302,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.:72:23:20,.,.,.,.:486,.,.,.,.:835:23,20	.	.	.	2/2:.,.,.,.,.,0,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.:30:1:.,18,.,.,.:.,465,.,.,.:32	.	.	.	.	.
+chr1	228527758	.	G	C	3734.28	.	AB=0.471125;ABP=5.39298;AC=1;AF=0.5;AN=2;AO=155;CIGAR=1X;DP=329;DPB=329;DPRA=0;EPP=7.05905;EPPR=43.7913;GTI=0;LEN=1;MEANALT=2;MQM=41.9613;MQMR=41.896;NS=1;NUMALT=1;ODDS=859.851;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=5559;QR=6236;RO=173;RPL=95;RPP=20.1719;RPPR=28.4278;RPR=60;RUN=1;SAF=68;SAP=8.06773;SAR=87;SF=6;SRF=75;SRP=9.65024;SRR=98;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	0/1:-383.207,0,-440.67:329:173:155:5559:6236:173,155	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr1	228528412	.	G	A	2868.37	.	AB=0.437126;ABP=8.74455;AC=18;AF=0.5;AN=30;AO=73;CIGAR=1X;DP=3016;DPB=167;DPRA=0;EPP=3.27802;EPPR=5.83555;GTI=0;LEN=1;MEANALT=2;MQM=41.8904;MQMR=41.5699;NS=1;NUMALT=1;ODDS=320.36;PAIRED=1;PAIREDR=0.967742;PAO=0;PQA=0;PQR=0;PRO=0;QA=2248;QR=3324;RO=93;RPL=29;RPP=9.70319;RPPR=31.613;RPR=44;RUN=1;SAF=31;SAP=6.60959;SAR=42;SF=2,5,6,10,12,13,17,20,23,25,27,29,30,31,33;SRF=46;SRP=3.03365;SRR=47;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	0/1:-147.002,0,-238.177:167:93:73:2248:3324	.	.	0/1:-253.744,0,-288.828:226:115:111:3699:4109:115,111	1/1:-449.341,-46.0576,0:154:0:153:5148:0:0,153	.	.	.	0/1:-221.7,0,-254.483:204:104:97:3244:3634:104,97	.	0/1:-304.395,0,-289.544:250:116:132:4355:4194:116,132	1/1:-623.21,-64.9066,0:227:2:222:7164:28	.	.	.	0/1:-187.108,0,-216.354:172:87:82:2727:3084	.	.	0/1:-264.216,0,-352.014:252:136:116:3899:4922:136,116	.	.	0/1:-196.057,0,-263.226:188:102:85:2899:3706	.	1/1:-755.529,-76.2938,0:270:3:263:8702:42:3,263	.	0/1:-195.598,0,-259.8:200:106:91:2913:3674:106,91	.	0/1:-374.659,0,-359.559:313:146:164:5348:5233	0/1:-178.239,0,-148.711:142:61:80:2524:2216	0/1:-126.094,0,-144.106:116:57:58:1837:2055	.	0/1:-162.384,0,-157.524:135:66:69:2318:2276	.	.	.
+chr1	228528563	.	C	G	6195.54	.	AB=0.554688;ABP=6.33537;AC=26;AF=0.5;AN=40;AO=71;CIGAR=1X;DP=6997;DPB=128;DPRA=0;EPP=8.17902;EPPR=16.763;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=41.9649;NS=1;NUMALT=1;ODDS=308.497;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=2612;QR=2102;RO=57;RPL=48;RPP=22.1254;RPPR=19.8106;RPR=23;RUN=1;SAF=33;SAP=3.7749;SAR=38;SF=1,2,5,6,10,12,13,16,17,20,21,23,25,26,27,28,29,30,31,33;SRF=34;SRP=7.61992;SRR=23;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	0/1:-187.926,0,-143.917:128:57:71:2612:2102	1/1:-1074.3,-96.5662,0:348:3:345:12541:91	.	.	0/1:-556.419,0,-495.205:408:196:212:7865:7141:196,212	1/1:-903.759,-86.0946,0:286:0:286:10523:0:0,286	.	.	.	0/1:-443.934,0,-487.331:368:193:175:6447:7005:193,175	.	0/1:-723.675,0,-692.435:555:272:283:10330:9910:272,283	1/1:-1077.44,-104.068,0:353:1:349:12492:15	.	.	0/1:-396.077,0,-405.64:306:155:151:5651:5740:155,151	0/1:-548.136,0,-519.381:418:205:213:7792:7530	.	.	0/1:-504.972,0,-579.946:427:223:203:7434:8158:223,203	0/1:-208.327,0,-166.737:151:68:82:2923:2438:68,82	.	1/1:-1374.15,-129.744,0:433:0:431:15938:0	.	1/1:-1375.4,-134.259,0:450:0:446:15902:0:0,446	0/1:-604.02,0,-437.422:425:186:238:8452:6523	0/1:-411.994,0,-520.721:373:206:167:6050:7294:206,167	0/1:-343.939,0,-254.292:240:104:136:4806:3752	0/1:-662.847,0,-669.092:545:270:272:9515:9618	0/1:-369.124,0,-356.73:289:148:141:5265:5128	1/1:-518.297,-48.8731,0:167:1:166:6015:14	.	0/1:-389.949,0,-432.242:327:170:157:5633:6134	.	.	.
+chr1	228529129	.	C	A	1811.19	.	AB=0.557143;ABP=4.99565;AC=8;AF=0.5;AN=16;AO=39;CIGAR=1X;DP=1088;DPB=70;DPRA=0;EPP=5.73856;EPPR=3.64073;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=41.871;NS=1;NUMALT=1;ODDS=155.403;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1409;QR=1119;RO=31;RPL=12;RPP=15.538;RPPR=23.254;RPR=27;RUN=1;SAF=24;SAP=7.52028;SAR=15;SF=1,2,16,21,23,26,28,31;SRF=22;SRP=14.8483;SRR=9;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	0/1:-101.552,0,-76.557:70:31:39:1409:1119	0/1:-244.222,0,-202.138:190:90:99:3584:3182	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-172.931,0,-156.815:136:68:68:2487:2307:68,68	.	.	.	.	0/1:-127.495,0,-56.8406:77:29:48:1732:904:29,48	.	0/1:-309.987,0,-184.625:196:78:118:4311:2825	.	.	0/1:-288.88,0,-211.15:220:100:120:4131:3179	.	0/1:-139.158,0,-104.841:105:48:56:1990:1597	.	.	0/1:-151.265,0,-71.8689:94:33:61:2115:1155	.	.	.	.	.
+chr1	228543800	.	C	T	3010.77	.	AB=0.47541;ABP=3.65106;AC=8;AF=0.5;AN=16;AO=58;CIGAR=1X;DP=2014;DPB=122;DPRA=0;EPP=10.3484;EPPR=9.66043;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=42;NS=1;NUMALT=1;ODDS=305.967;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=2132;QR=2344;RO=64;RPL=10;RPP=57.0725;RPPR=68.6973;RPR=48;RUN=1;SAF=42;SAP=28.3192;SAR=16;SF=1,2,16,21,23,26,28,31;SRF=49;SRP=42.2325;SRR=15;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	0/1:-148.095,0,-167.338:122:64:58:2132:2344	0/1:-391.283,0,-382.295:309:155:153:5583:5453	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-442.18,0,-444.594:339:172:167:6287:6290:172,167	.	.	.	.	0/1:-190.608,0,-146.917:137:63:73:2718:2149:63,73	.	0/1:-378.982,0,-470.859:334:185:149:5545:6562	.	.	0/1:-538.631,0,-447.077:395:185:209:7623:6498	.	0/1:-265.12,0,-232.255:194:93:101:3735:3331	.	.	0/1:-260.468,0,-201.833:184:85:99:3673:2948	.	.	.	.	.
+chr1	228547901	.	C	T	2420.59	.	AB=0.405229;ABP=14.9463;AC=30;AF=0.5;AN=50;AO=62;CIGAR=1X;DP=4082;DPB=153;DPRA=0;EPP=9.87495;EPPR=14.688;GTI=0;LEN=1;MEANALT=2;MQM=42;MQMR=41.5222;NS=1;NUMALT=1;ODDS=323.741;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2252;QR=3189;RO=90;RPL=31;RPP=3.0103;RPPR=3.39634;RPR=31;RUN=1;SAF=39;SAP=11.9764;SAR=23;SF=3,4,5,7,8,9,10,11,12,14,15,16,17,18,19,21,22,26,27,28,29,30,34,35,36;SRF=57;SRP=16.9077;SRR=33;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	0/1:-149.469,0,-230.854:153:90:62:2252:3189:90,62	0/1:-268.271,0,-272.465:213:108:105:3840:3866	0/1:-233.992,0,-197.187:173:83:90:3303:2861:83,90	.	1/1:-736.974,-71.0431,0:237:0:236:8571:0	0/1:-123.821,0,-129.326:102:51:49:1776:1831	0/1:-172.759,0,-179.002:137:70:67:2469:2532:70,67	0/1:-168.867,0,-200.75:153:79:72:2467:2837:79,72	0/1:-240.1,0,-285.626:218:115:102:3526:4026	0/1:-278.492,0,-215.886:195:88:107:3925:3148:88,107	.	1/1:-367.29,-34.4232,0:119:1:118:4256:14	0/1:-238.946,0,-205.007:181:85:95:3423:2987	0/1:-221.256,0,-131.757:142:57:83:3040:1996:57,83	0/1:-207.185,0,-259.327:186:102:84:3095:3617	1/1:-423.814,-41.8432,0:140:0:139:4908:0	1/1:-538.846,-52.4163,0:181:1:177:6228:13	.	0/1:-74.6097,0,-194.536:113:78:35:1245:2611:78,35	0/1:-148.354,0,-112.766:107:50:57:2077:1655	.	.	.	0/1:-250.538,0,-287.625:229:121:108:3675:4086	0/1:-248.974,0,-296.76:224:117:106:3650:4177:117,106	0/1:-140.472,0,-143.507:122:62:59:2036:2087	0/1:-314.883,0,-349.264:279:142:136:4611:5003	0/1:-136.207,0,-162.083:121:63:58:1981:2277	.	.	.	0/1:-143.656,0,-133.919:109:52:57:2043:1912	1/1:-298.466,-26.2213,0:99:1:98:3480:37	0/1:-194.562,0,-171.443:149:70:79:2764:2485
+chr1	228548197	.	G	A	3502.81	.	AB=0.516779;ABP=3.37464;AC=8;AF=0.5;AN=16;AO=77;CIGAR=1X;DP=2324;DPB=149;DPRA=0;EPP=37.5565;EPPR=30.1537;GTI=0;LEN=1;MEANALT=1;MQM=41.7532;MQMR=41.7361;NS=1;NUMALT=1;ODDS=391.6;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=2862;QR=2644;RO=72;RPL=19;RPP=45.9039;RPPR=46.5604;RPR=58;RUN=1;SAF=47;SAP=11.1604;SAR=30;SF=1,2,16,21,23,26,28,31;SRF=48;SRP=20.3821;SRR=24;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	0/1:-203.709,0,-185.393:149:72:77:2862:2644	0/1:-383.666,0,-397.404:312:157:154:5511:5660	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-367.648,0,-409.774:303:158:144:5299:5766:158,144	.	.	.	.	0/1:-233.697,0,-208.632:179:87:91:3339:3001:87,91	.	0/1:-603.665,0,-518.562:433:203:230:8471:7471	.	.	0/1:-545.943,0,-563.898:459:226:229:7844:8039	.	0/1:-265.363,0,-313.988:240:126:113:3895:4430	.	.	0/1:-325.118,0,-292.132:249:116:131:4592:4210	.	.	.	.	.
+chr1	228550344	.	G	A	3442.42	.	AB=0.549587;ABP=8.17876;AC=1;AF=0.5;AN=2;AO=133;CIGAR=1X;DP=242;DPB=242;DPRA=0;EPP=5.76954;EPPR=3.1896;GTI=0;LEN=1;MEANALT=1;MQM=41.985;MQMR=41.9817;NS=1;NUMALT=1;ODDS=610.552;PAIRED=1;PAIREDR=0.990826;PAO=0;PQA=0;PQR=0;PRO=0;QA=4909;QR=3980;RO=109;RPL=72;RPP=4.98585;RPPR=6.37708;RPR=61;RUN=1;SAF=71;SAP=4.33278;SAR=62;SF=9;SRF=59;SRP=4.62396;SRR=50;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	0/1:-352.132,0,-272.831:242:109:133:4909:3980:109,133	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr1	228550426	.	C	T	992.21	.	AB=0.375;ABP=7.35324;AC=8;AF=0.5;AN=16;AO=12;CIGAR=1X;DP=741;DPB=32;DPRA=0;EPP=14.5915;EPPR=13.8677;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=42;NS=1;NUMALT=1;ODDS=41.4072;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=389;QR=752;RO=20;RPL=6;RPP=3.0103;RPPR=4.74748;RPR=6;RUN=1;SAF=4;SAP=5.9056;SAR=8;SF=1,2,16,21,23,26,28,31;SRF=7;SRP=6.91895;SRR=13;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	0/1:-24.6194,0,-55.9498:32:20:12:389:752	0/1:-141.452,0,-124.929:108:51:56:1993:1803	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-152.823,0,-134.796:117:56:60:2169:1946:56,60	.	.	.	.	0/1:-57.7384,0,-49.5237:48:23:25:823:727:23,25	.	0/1:-138.058,0,-201.598:135:77:58:2050:2783	.	.	0/1:-156.867,0,-199.968:154:84:70:2320:2817	.	0/1:-108.394,0,-68.8277:75:29:44:1491:1039	.	.	0/1:-97.5158,0,-76.7768:72:32:40:1360:1126	.	.	.	.	.
+chr1	228550429	.	C	T	822.61	.	AB=0.454545;ABP=3.99733;AC=4;AF=0.5;AN=8;AO=25;CIGAR=1X;DP=331;DPB=55;DPRA=0;EPP=13.5202;EPPR=31.9633;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=42;NS=1;NUMALT=1;ODDS=125.79;PAIRED=1;PAIREDR=0.966667;PAO=0;PQA=0;PQR=0;PRO=0;QA=902;QR=1077;RO=30;RPL=20;RPP=22.5536;RPPR=5.61607;RPR=5;RUN=1;SAF=13;SAP=3.09716;SAR=12;SF=24,32,33,34;SRF=13;SRP=4.16842;SRR=17;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-62.1969,0,-77.2573:55:30:25:902:1077:30,25	.	.	.	.	.	.	.	0/1:-127.962,0,-125.195:100:49:51:1817:1783	0/1:-62.1957,0,-157.01:88:60:28:1016:2107	0/1:-119.023,0,-110.724:88:43:45:1673:1575	.	.
+chr1	228553245	.	C	T	4218.21	.	AB=0.518634;ABP=3.98139;AC=1;AF=0.5;AN=2;AO=167;CIGAR=1X;DP=322;DPB=322;DPRA=0;EPP=4.06353;EPPR=3.13639;GTI=0;LEN=1;MEANALT=1;MQM=41.9641;MQMR=41.9226;NS=1;NUMALT=1;ODDS=897.836;PAIRED=1;PAIREDR=0.974194;PAO=0;PQA=0;PQR=0;PRO=0;QA=6110;QR=5706;RO=155;RPL=103;RPP=22.7876;RPPR=14.7923;RPR=64;RUN=1;SAF=72;SAP=9.8888;SAR=95;SF=36;SRF=77;SRP=3.02431;SRR=78;TYPE=snp	GT:GL:DP:RO:AO:QA:QR	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-431.675,0,-398.147:322:155:167:6110:5706
+chr1	228556788	.	C	T	3969.40	.	AB=0.524064;ABP=3.95088;AC=35;AF=0.5;AN=54;AO=98;CIGAR=1X;DP=5848;DPB=187;DPRA=0;EPP=3.09893;EPPR=3.22989;GTI=0;LEN=1;MEANALT=1;MQM=41.9592;MQMR=41.7865;NS=1;NUMALT=1;ODDS=516.095;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3628;QR=3349;RO=89;RPL=33;RPP=25.7;RPPR=15.9171;RPR=65;RUN=1;SAF=53;SAP=4.4284;SAR=45;SF=0,1,3,4,5,7,8,9,11,14,15,16,17,18,19,20,21,22,26,27,28,29,30,32,34,35,36;SRF=45;SRP=3.0347;SRR=44;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	0/1:-257.643,0,-232.002:187:89:98:3628:3349:89,98	0/1:-102.749,0,-68.3221:65:27:38:1412:1015	.	0/1:-252.846,0,-250.979:190:93:96:3613:3572:93,96	0/1:-401.53,0,-353.372:285:134:150:5650:5089	0/1:-350.986,0,-390.117:280:146:134:5039:5502:146,134	.	1/1:-980.958,-89.6138,0:303:1:302:11406:16	0/1:-244.518,0,-255.375:188:96:92:3485:3610	0/1:-333.11,0,-231.013:213:91:122:4609:3434:91,122	.	1/1:-941.073,-91.2121,0:305:0:303:10916:0	.	.	1/1:-590.879,-55.3895,0:184:0:184:6846:0	1/1:-635.022,-54.8505,0:206:2:203:7420:78	0/1:-258.832,0,-314.146:221:118:103:3796:4422:118,103	0/1:-481.504,0,-445.77:353:170:182:6822:6390	1/1:-487.357,-38.8169,0:156:3:153:5745:91	1/1:-819.811,-76.1606,0:253:0:253:9511:0	1/1:-933.603,-86.3956,0:288:0:287:10818:0:0,287	0/1:-55.5946,0,-193.779:98:71:27:992:2580:71,27	0/1:-118.809,0,-134.904:98:52:46:1708:1897	.	.	.	0/1:-355.281,0,-429.543:312:165:145:5210:6063	0/1:-348.204,0,-341.054:272:132:138:4961:4900:132,138	0/1:-193.179,0,-201.258:155:77:78:2794:2876	0/1:-489.399,0,-407.958:353:160:193:6923:5944	0/1:-215.114,0,-193.986:154:73:81:3021:2780	.	0/1:-344.651,0,-241.481:220:94:126:4753:3564	.	0/1:-240.206,0,-207.101:169:80:89:3369:2981	1/1:-316.114,-28.8989,0:96:0:96:3659:0	0/1:-233.388,0,-417.548:244:151:93:3555:5693
+chr1	228557681	.	G	A	1389.57	.	AB=0.402685;ABP=15.2667;AC=1;AF=0.5;AN=2;AO=60;CIGAR=1X;DP=149;DPB=149;DPRA=0;EPP=3.15506;EPPR=3.63429;GTI=0;LEN=1;MEANALT=2;MQM=42;MQMR=42;NS=1;NUMALT=1;ODDS=319.96;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2220;QR=3182;RO=87;RPL=31;RPP=3.15506;RPPR=3.23494;RPR=29;RUN=1;SAF=40;SAP=17.4868;SAR=20;SF=32;SRF=52;SRP=10.2236;SRR=35;TYPE=snp	GT:GL:DP:RO:AO:QA:QR	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-147.661,0,-232.047:149:87:60:2220:3182	.	.	.	.
+chr1	228558892	.	C	T	3935.85	.	AB=0.440789;ABP=7.63896;AC=8;AF=0.5;AN=16;AO=67;CIGAR=1X;DP=2719;DPB=152;DPRA=0;EPP=4.59839;EPPR=3.94093;GTI=0;LEN=1;MEANALT=2;MQM=42;MQMR=41.9762;NS=1;NUMALT=1;ODDS=353.968;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=2395;QR=3087;RO=84;RPL=44;RPP=17.3031;RPPR=29.4816;RPR=23;RUN=1;SAF=28;SAP=6.93191;SAR=39;SF=1,2,16,21,23,26,28,31;SRF=27;SRP=26.2761;SRR=57;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	0/1:-162.343,0,-223.225:152:84:67:2395:3087	0/1:-615.252,0,-536.392:450:214:236:8695:7729	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-471.564,0,-521.507:389:202:187:6811:7388:202,187	.	.	.	.	0/1:-266.749,0,-242.476:205:101:104:3797:3489:101,104	.	0/1:-581.372,0,-593.782:461:233:228:8317:8445	.	.	0/1:-568.085,0,-658.323:508:265:243:8322:9350	.	0/1:-288.097,0,-351.799:271:146:125:4255:5013	.	.	0/1:-356.87,0,-359.108:283:140:142:5092:5107	.	.	.	.	.
+chr1	228558952	.	T	G	2013.41	.	AB=0.494382;ABP=3.0591;AC=1;AF=0.5;AN=2;AO=88;CIGAR=1X;DP=178;DPB=178;DPRA=0;EPP=17.2236;EPPR=10.0615;GTI=0;LEN=1;MEANALT=2;MQM=41.9318;MQMR=41.3146;NS=1;NUMALT=1;ODDS=463.605;PAIRED=0.977273;PAIREDR=0.977528;PAO=0;PQA=0;PQR=0;PRO=0;QA=3135;QR=3175;RO=89;RPL=71;RPP=74.965;RPPR=40.1205;RPR=17;RUN=1;SAF=27;SAP=31.5356;SAR=61;SF=2;SRF=31;SRP=20.7969;SRR=58;TYPE=snp	GT:GL:DP:RO:AO:QA:QR	.	.	0/1:-219.727,0,-218.729:178:89:88:3135:3175	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr1	228559167	.	C	A	15.21	.	AB=0.4;ABP=3.44459;AC=1;AF=0.5;AN=2;AO=2;CIGAR=1X;DP=5;DPB=5;DPRA=0;EPP=3.0103;EPPR=3.73412;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=42;NS=1;NUMALT=1;ODDS=3.47068;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=73;QR=98;RO=3;RPL=2;RPP=7.35324;RPPR=3.73412;RPR=0;RUN=1;SAF=1;SAP=3.0103;SAR=1;SF=25;SRF=2;SRP=3.73412;SRR=1;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-5.21657,0,-7.50682:5:3:2:73:98:3,2	.	.	.	.	.	.	.	.	.	.	.
+chr1	228559430	.	G	A	4622.82	.	AB=0.528736;ABP=5.50625;AC=1;AF=0.5;AN=2;AO=184;CIGAR=1X;DP=348;DPB=348;DPRA=0;EPP=7.73089;EPPR=6.86033;GTI=0;LEN=1;MEANALT=2;MQM=40.9402;MQMR=41.7055;NS=1;NUMALT=1;ODDS=915.202;PAIRED=0.994565;PAIREDR=0.969325;PAO=0;PQA=0;PQR=0;PRO=0;QA=6761;QR=5927;RO=163;RPL=68;RPP=30.2009;RPPR=34.9962;RPR=116;RUN=1;SAF=88;SAP=3.76559;SAR=96;SF=7;SRF=78;SRP=3.66307;SRR=85;TYPE=snp	GT:GL:DP:RO:AO:QA:QR	.	.	.	.	.	.	.	0/1:-472.9,0,-408.402:348:163:184:6761:5927	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr1	228559450	.	G	A	5733.68	.	AB=0.538462;ABP=8.5225;AC=1;AF=0.5;AN=2;AO=231;CIGAR=1X;DP=429;DPB=429;DPRA=0;EPP=3.0197;EPPR=6.59988;GTI=0;LEN=1;MEANALT=3;MQM=41.1732;MQMR=41.8571;NS=1;NUMALT=1;ODDS=1067.47;PAIRED=0.969697;PAIREDR=0.979592;PAO=0;PQA=0;PQR=0;PRO=0;QA=8318;QR=6918;RO=196;RPL=80;RPP=50.3973;RPPR=30.7077;RPR=151;RUN=1;SAF=103;SAP=8.8855;SAR=128;SF=25;SRF=94;SRP=3.71935;SRR=102;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-586.626,0,-474.581:429:196:231:8318:6918:196,231	.	.	.	.	.	.	.	.	.	.	.
+chr1	228559967	.	C	T	1722.75	.	AB=0.54918;ABP=5.57335;AC=8;AF=0.5;AN=16;AO=67;CIGAR=1X;DP=1253;DPB=122;DPRA=0;EPP=5.63551;EPPR=3.99733;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=41.6545;NS=1;NUMALT=1;ODDS=290.667;PAIRED=1;PAIREDR=0.981818;PAO=0;PQA=0;PQR=0;PRO=0;QA=2463;QR=1958;RO=55;RPL=34;RPP=3.04271;RPPR=4.94488;RPR=33;RUN=1;SAF=39;SAP=6.93191;SAR=28;SF=8,15,18,19,21,22,29,30;SRF=30;SRP=3.99733;SRR=25;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	0/1:-176.809,0,-132.927:122:55:67:2463:1958	.	.	.	.	.	.	0/1:-239.544,0,-266.83:204:105:98:3537:3770	.	.	0/1:-150.589,0,-128.858:110:51:59:2110:1857	0/1:-216.581,0,-260.329:189:101:87:3150:3650	.	0/1:-25.3167,0,-175.007:80:65:15:567:2274:65,15	0/1:-83.7611,0,-94.9555:72:38:34:1212:1341	.	.	.	.	.	.	0/1:-403.71,0,-420.783:338:173:164:5880:6001	0/1:-147.864,0,-205.163:138:79:59:2183:2827	.	.	.	.	.	.
+chr1	228559994	.	C	T	3862.94	.	AB=0.491525;ABP=3.12071;AC=46;AF=0.5;AN=66;AO=87;CIGAR=1X;DP=6466;DPB=177;DPRA=0;EPP=12.0207;EPPR=3.87889;GTI=0;LEN=1;MEANALT=1;MQM=41.954;MQMR=42;NS=1;NUMALT=1;ODDS=482.828;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3125;QR=3247;RO=90;RPL=40;RPP=4.23331;RPPR=12.6613;RPR=47;RUN=1;SAF=55;SAP=16.2139;SAR=32;SF=0,1,2,3,4,5,6,7,8,9,10,11,12,14,15,16,17,18,19,20,21,22,23,24,26,28,29,30,31,32,33,34,36;SRF=57;SRP=16.9077;SRR=33;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	0/1:-218.47,0,-229.487:177:90:87:3125:3247:90,87	1/1:-290.035,-27.6948,0:92:0:92:3347:0	1/1:-616.636,-60.507,0:202:0:201:7116:0	0/1:-256.712,0,-243.491:205:97:107:3724:3512:97,107	0/1:-344.031,0,-259.344:245:108:135:4847:3818	0/1:-302.004,0,-237.054:208:94:114:4221:3445:94,114	0/1:-216.931,0,-241.192:187:97:90:3140:3416:97,90	1/1:-867.586,-79.606,0:280:3:274:10077:43	0/1:-234.664,0,-152.941:158:67:90:3255:2343	0/1:-225.46,0,-206.222:168:80:87:3193:2953:80,87	0/1:-231.953,0,-323.157:214:122:92:3425:4455:122,92	1/1:-763.861,-72.7723,0:259:2:255:8846:52	0/1:-362.98,0,-295.191:266:123:142:5119:4328:123,142	.	1/1:-465.546,-43.6494,0:145:0:145:5373:0	1/1:-725.17,-66.919,0:233:1:232:8511:33	1/1:-602.003,-57.1957,0:192:0:190:6989:0:0,190	0/1:-318.669,0,-332.213:256:130:124:4576:4695	1/1:-346.996,-34.0164,0:114:0:113:4024:0	1/1:-673.944,-64.4204,0:216:0:214:7783:0	1/1:-910.826,-87.9008,0:292:0:292:10590:0:0,292	0/1:-171.317,0,-56.2802:93:28:65:2287:961:28,65	0/1:-99.6672,0,-107.673:84:44:40:1434:1535	0/1:-299.516,0,-296.401:235:118:115:4272:4224	0/1:-110.464,0,-103.028:82:40:42:1556:1466:40,42	.	1/1:-803.757,-77.8862,0:270:2:266:9328:31	.	1/1:-398.707,-39.2855,0:139:1:134:4611:15	0/1:-448.004,0,-451.055:372:186:186:6495:6484	0/1:-185.201,0,-207.877:154:82:72:2670:2928	0/1:-196.212,0,-193.799:164:79:81:2821:2773	0/1:-163.444,0,-343.436:197:127:70:2600:4637	0/1:-197.792,0,-192.152:157:76:80:2824:2745	1/1:-586.034,-56.2926,0:190:0:187:6778:0	.	0/1:-341.295,0,-199.895:220:90:130:4717:3067
+chr1	228560139	.	A	G	10378.42	.	AB=0;ABP=0;AC=70;AF=1;AN=74;AO=330;CIGAR=1X;DP=13427;DPB=330;DPRA=0;EPP=74.182;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=41.8364;MQMR=0;NS=1;NUMALT=1;ODDS=462.082;PAIRED=0.993939;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=12064;QR=0;RO=0;RPL=105;RPP=97.7655;RPPR=0;RPR=225;RUN=1;SAF=162;SAP=3.24719;SAR=168;SF=0,1,2,3,4,5,6,7,8,9,10,11,12,13,14,15,16,17,18,19,20,21,22,23,24,25,26,27,28,29,30,31,32,33,34,35,36;SRF=0;SRP=0;SRR=0;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	1/1:-1044.08,-99.3399,0:330:0:330:12064:0:0,330	1/1:-427.264,-40.037,0:133:0:133:4935:0	1/1:-1324.06,-128.841,0:428:0:428:15351:0	1/1:-1268.64,-121.917,0:405:0:405:14677:0:0,405	1/1:-1616.81,-153.224,0:509:0:509:18722:0	1/1:-1442.09,-138.173,0:459:0:459:16756:0:0,459	1/1:-996.103,-93.6203,0:312:0:311:11493:0:0,311	1/1:-1652.88,-160.148,0:532:0:532:19205:0	1/1:-909.485,-87.2987,0:290:0:290:10520:0	1/1:-900.092,-84.8905,0:283:0:282:10414:0:0,282	1/1:-1304.02,-124.927,0:415:0:415:15046:0:0,415	1/1:-1187.49,-113.709,0:390:1:388:13790:38	1/1:-1618.84,-157.439,0:523:0:523:18894:0:0,523	0/1:-470.149,0,-398.904:357:168:188:6668:5880	0/1:-280.34,0,-416.082:270:158:112:4171:5741	1/1:-1297.73,-125.251,0:425:1:422:15147:39	1/1:-1087.5,-102.252,0:345:1:343:12620:15:1,343	1/1:-1332.97,-127.417,0:428:1:426:15450:14	1/1:-675.963,-66.5276,0:222:0:221:7813:0	1/1:-1252.63,-120.111,0:399:0:399:14464:0	1/1:-1442.42,-137.571,0:457:0:457:16712:0:0,457	1/1:-506.994,-49.971,0:166:0:166:5833:0:0,166	1/1:-475.5,-47.2617,0:158:0:157:5513:0	0/1:-621.69,0,-419.835:406:172:234:8625:6263	1/1:-539.016,-51.1751,0:170:0:170:6235:0:0,170	1/1:-1824.25,-176.705,0:588:0:587:21091:0:0,587	1/1:-1594.8,-158.612,0:541:1:537:18607:38	1/1:-1444.57,-139.076,0:463:0:462:16671:0:0,462	1/1:-797.035,-79.773,0:265:0:265:9217:0	1/1:-1785.14,-174.898,0:582:0:581:20678:0	1/1:-897.717,-86.6966,0:288:0:288:10340:0	1/1:-730.581,-71.3441,0:237:0:237:8434:0	1/1:-1285.87,-125.228,0:416:0:416:14824:0	0/1:-407.059,0,-426.823:327:165:162:5850:6060	1/1:-960.393,-91.5131,0:305:0:304:11110:0	1/1:-576.01,-54.4864,0:182:0:181:6646:0	1/1:-1300.31,-126.132,0:421:0:419:15041:0
+chr1	228560426	.	A	C	6606.05	.	AB=0.502773;ABP=3.04642;AC=1;AF=0.5;AN=2;AO=272;CIGAR=1X;DP=541;DPB=541;DPRA=0;EPP=19.9031;EPPR=11.3073;GTI=0;LEN=1;MEANALT=2;MQM=40.9743;MQMR=41.7799;NS=1;NUMALT=1;ODDS=1521.1;PAIRED=0.974265;PAIREDR=0.973881;PAO=0;PQA=0;PQR=0;PRO=0;QA=9845;QR=9875;RO=268;RPL=87;RPP=79.6824;RPPR=60.1816;RPR=185;RUN=1;SAF=172;SAP=44.396;SAR=100;SF=15;SRF=164;SRP=32.1793;SRR=104;TYPE=snp	GT:GL:DP:RO:AO:QA:QR	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-681.699,0,-689.548:541:268:272:9845:9875	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr1	228560592	.	A	G	7201.35	.	AB=0.49011;ABP=3.39687;AC=2;AF=0.5;AN=4;AO=223;CIGAR=1X;DP=1297;DPB=455;DPRA=0;EPP=24.5205;EPPR=13.8302;GTI=0;LEN=1;MEANALT=1;MQM=40.2332;MQMR=40.5733;NS=1;NUMALT=1;ODDS=1185.82;PAIRED=0.991031;PAIREDR=0.969828;PAO=0;PQA=0;PQR=0;PRO=0;QA=7817;QR=7795;RO=232;RPL=77;RPP=49.3707;RPPR=75.4926;RPR=146;RUN=1;SAF=108;SAP=3.48744;SAR=115;SF=8,29;SRF=121;SRP=3.94628;SRR=111;TYPE=snp	GT:GL:DP:RO:AO:QA:QR	.	.	.	.	.	.	.	.	0/1:-531.269,0,-530.877:455:232:223:7817:7795	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-939.769,0,-984.204:842:417:422:13961:14333	.	.	.	.	.	.	.
+chr1	228560700	.	T	C	10415.27	.	AB=0;ABP=0;AC=59;AF=1;AN=70;AO=446;CIGAR=1X;DP=16424;DPB=446;DPRA=0;EPP=13.3126;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=41.2623;MQMR=0;NS=1;NUMALT=1;ODDS=622.892;PAIRED=0.973094;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=15814;QR=0;RO=0;RPL=294;RPP=101.184;RPPR=0;RPR=152;RUN=1;SAF=180;SAP=39.0197;SAR=266;SF=0,1,2,3,4,5,7,8,9,10,11,12,13,14,15,16,17,18,19,20,21,22,23,24,26,27,28,29,30,31,32,33,34,35,36;SRF=0;SRP=0;SRR=0;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	1/1:-1364.01,-134.259,0:446:0:446:15814:0:0,446	1/1:-511.958,-53.5833,0:178:0:178:6086:0	1/1:-1318.17,-141.785,0:474:0:471:15914:0	1/1:-1444,-144.702,0:486:1:485:17236:16:1,485	1/1:-1862.47,-187.542,0:623:0:623:21873:0	0/1:-680.326,0,-860.177:612:328:282:10185:12095:328,282	.	1/1:-1971.51,-198.981,0:664:0:661:23265:0	1/1:-1275,-128.446,0:432:1:431:15170:16	1/1:-1077.39,-110.779,0:369:0:368:12790:0:0,368	0/1:-506.889,0,-633.244:468:241:223:7814:8942:241,223	1/1:-1549.21,-161.847,0:552:2:545:18238:32	0/1:-790.077,0,-1046.71:751:402:349:12246:14819:402,349	0/1:-568.948,0,-515.055:450:210:239:8136:7517	1/1:-1144.12,-118.606,0:396:0:394:13657:0	1/1:-1634.71,-169.654,0:572:1:567:19652:15	1/1:-1112.72,-111.989,0:377:1:376:13257:15:1,376	0/1:-688.345,0,-794.242:597:301:293:10341:11282	1/1:-981.378,-104.457,0:348:0:347:11879:0	1/1:-1681.81,-168.313,0:577:3:572:20345:65	1/1:-1698.19,-174.898,0:582:0:581:20434:0:0,581	1/1:-608.465,-63.2163,0:212:0:210:7039:0:0,210	1/1:-657.755,-69.5379,0:231:0:231:7634:0	0/1:-821.064,0,-827.926:662:325:337:11985:11918	1/1:-790.734,-84.2884,0:280:0:280:9523:0:0,280	.	1/1:-1536.51,-159.787,0:548:3:544:18224:54	0/1:-710.82,0,-694.709:585:280:304:10425:10076:280,304	1/1:-1011.64,-106.988,0:369:2:366:12451:50	0/1:-841.466,0,-1009.2:787:406:378:12989:14579	0/1:-479.751,0,-502.461:398:194:204:7247:7205	0/1:-447.137,0,-341.098:330:139:190:6307:5105	1/1:-1367.22,-147.505,0:491:0:490:16506:0	0/1:-440.211,0,-380.854:333:152:180:6307:5556	1/1:-1315.02,-137.27,0:458:0:456:15809:0	1/1:-752.944,-79.1229,0:268:1:264:8904:16	1/1:-1492.82,-155.633,0:518:0:517:17843:0
+chr1	228562350	.	T	C	6435.77	.	AB=0.544053;ABP=10.6631;AC=1;AF=0.5;AN=2;AO=247;CIGAR=1X;DP=454;DPB=454;DPRA=0;EPP=3.08942;EPPR=3.52432;GTI=0;LEN=1;MEANALT=1;MQM=41.5061;MQMR=41.8068;NS=1;NUMALT=1;ODDS=1193.58;PAIRED=0.987854;PAIREDR=0.990338;PAO=0;PQA=0;PQR=0;PRO=0;QA=9194;QR=7719;RO=207;RPL=142;RPP=15.0457;RPPR=6.04197;RPR=105;RUN=1;SAF=113;SAP=6.8873;SAR=134;SF=17;SRF=87;SRP=14.4341;SRR=120;TYPE=snp	GT:GL:DP:RO:AO:QA:QR	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-653.25,0,-527.82:454:207:247:9194:7719	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr1	228562438	.	G	A	1663.05	.	AB=0.608696;ABP=14.8118;AC=1;AF=0.5;AN=2;AO=70;CIGAR=1X;DP=115;DPB=115;DPRA=0;EPP=3.50664;EPPR=20.4303;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=41.5778;NS=1;NUMALT=1;ODDS=226.51;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2494;QR=1664;RO=45;RPL=58;RPP=68.6508;RPPR=16.956;RPR=12;RUN=1;SAF=23;SAP=20.8784;SAR=47;SF=6;SRF=20;SRP=4.21667;SRR=25;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	0/1:-182.549,0,-108.733:115:45:70:2494:1664:45,70	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr1	228564747	.	G	T	731.78	.	AB=0.336449;ABP=27.8706;AC=1;AF=0.5;AN=2;AO=36;CIGAR=1X;DP=107;DPB=107;DPRA=0;EPP=6.8707;EPPR=9.09042;GTI=0;LEN=1;MEANALT=2;MQM=41.0556;MQMR=41.9429;NS=1;NUMALT=1;ODDS=168.498;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1346;QR=2505;RO=70;RPL=13;RPP=9.04217;RPPR=9.09042;RPR=23;RUN=1;SAF=21;SAP=5.18177;SAR=15;SF=21;SRF=38;SRP=4.12706;SRR=32;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-82.4991,0,-185.111:107:70:36:1346:2505:70,36	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr1	228564884	.	G	A	5215.92	.	AB=0.517647;ABP=3.47014;AC=9;AF=0.5;AN=18;AO=88;CIGAR=1X;DP=3954;DPB=170;DPRA=0;EPP=3.40511;EPPR=3.11623;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=42;NS=1;NUMALT=1;ODDS=467.235;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=3199;QR=3011;RO=82;RPL=61;RPP=31.5356;RPPR=18.2636;RPR=27;RUN=1;SAF=43;SAP=3.109;SAR=45;SF=1,2,12,16,21,23,26,28,31;SRF=41;SRP=3.0103;SRR=41;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	0/1:-227.404,0,-210.885:170:82:88:3199:3011	0/1:-727.231,0,-767.03:626:312:309:10567:11029	.	.	.	.	.	.	.	.	.	0/1:-919.665,0,-717.817:673:303:369:12893:10576:303,369	.	.	.	0/1:-678.057,0,-669.85:553:269:282:9732:9724:269,282	.	.	.	.	0/1:-245.516,0,-236.694:204:99:104:3550:3417:99,104	.	0/1:-678.132,0,-653.09:536:258:277:9666:9371	.	.	0/1:-681.432,0,-657.355:587:284:298:9921:9645	.	0/1:-326.091,0,-430.68:324:175:147:4890:6095	.	.	0/1:-346.418,0,-318.754:281:135:146:4961:4652	.	.	.	.	.
+chr1	228565208	.	C	T	6388.28	.	AB=0.521368;ABP=4.86626;AC=1;AF=0.5;AN=2;AO=244;CIGAR=1X;DP=468;DPB=468;DPRA=0;EPP=23.5147;EPPR=25.3454;GTI=0;LEN=1;MEANALT=1;MQM=41.9262;MQMR=41.9062;NS=1;NUMALT=1;ODDS=1307.37;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=9196;QR=8317;RO=224;RPL=94;RPP=30.9191;RPPR=11.735;RPR=150;RUN=1;SAF=142;SAP=17.2495;SAR=102;SF=6;SRF=127;SRP=11.735;SRR=97;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	0/1:-652.608,0,-579.207:468:224:244:9196:8317:224,244	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr1	228565209	.	G	A	4388.69	.	AB=0.441624;ABP=14.6723;AC=1;AF=0.5;AN=2;AO=174;CIGAR=1X;DP=394;DPB=394;DPRA=0;EPP=17.4369;EPPR=20.4216;GTI=0;LEN=1;MEANALT=1;MQM=41.977;MQMR=42;NS=1;NUMALT=1;ODDS=1010.53;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=6617;QR=8056;RO=220;RPL=64;RPP=29.4174;RPPR=43.4392;RPR=110;RUN=1;SAF=102;SAP=14.2421;SAR=72;SF=35;SRF=119;SRP=6.20829;SRR=101;TYPE=snp	GT:GL:DP:RO:AO:QA:QR	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-452.31,0,-580.21:394:220:174:6617:8056	.
+chr1	228566126	.	G	T	48.83	.	AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X;DP=2;DPB=2;DPRA=0;EPP=3.0103;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=0;NS=1;NUMALT=1;ODDS=7.37776;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=65;QR=0;RO=0;RPL=2;RPP=7.35324;RPPR=0;RPR=0;RUN=1;SAF=1;SAP=3.0103;SAR=1;SF=30;SRF=0;SRP=0;SRR=0;TYPE=snp	GT:GL:DP:RO:AO:QA:QR	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	1/1:-6.0868,-0.60206,0:2:0:2:65:0	.	.	.	.	.	.
+chr1	229567660	.	CGGCGGGGAGC	CGGGGGGGGAGC,CGGGCGGGGAGC,CGGGGGGGAGC,CGGCGGGGGAGC	255.44	.	AB=0.4;ABP=4.31318;AC=7,7,2,1;AF=0.5;AN=30;AO=6;CIGAR=1M1I2M;DP=504;DPB=17;DPRA=0;EPP=8.80089;EPPR=14.8328;GTI=0;LEN=1;MEANALT=1;MQM=41;MQMR=41.7778;NS=1;NUMALT=1;ODDS=14.8618;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=201;QR=311;RO=9;RPL=6;RPP=16.0391;RPPR=22.5536;RPR=0;RUN=1;SAF=1;SAP=8.80089;SAR=5;SF=1,2,4,6,9,10,12,14,15,16,18,21,22,25,27;SRF=1;SRP=14.8328;SRR=8;TYPE=ins	GT:GL:DP:RO:AO:QA:QR:AD	.	0/2:.,.,.,.,.,-23.1444,.,.,.,.,.,.,.,.,.:15:9:.,6,.,.:.,201,.,.:311	0/2:.,.,.,.,.,-70.1037,.,.,.,.,.,.,.,.,.:39:27:.,11,.,.:.,364,.,.:971	.	0/2:.,.,.,.,.,-63.3056,.,.,.,.,.,.,.,.,.:43:25:.,18,.,.:.,563,.,.:865	.	1/4:-46.9084,-22.5066,-18.8942,.,.,.,.,.,.,.,-25.6484,0,.,.,-22.3371:17:0:9,.,.,8:321,.,.,280:0:0,9,8	.	.	0/1:.,.,-30.9728,.,.,.,.,.,.,.,.,.,.,.,.:35:12:13,.,.,.:467,.,.,.:442:12,13	0/3:.,.,.,.,.,.,.,.,.,-38.7828,.,.,.,.,.:31:15:.,.,9,.:.,.,306,.:555:15,9	.	1/3:.,.,-27.1644,.,.,.,.,0,.,-81.018,.,.,.,.,.:45:0:31,.,14,.:1131,.,458,.:0:0,31,14	.	0/2:.,.,.,.,.,-9.50563,.,.,.,.,.,.,.,.,.:34:7:.,27,.,.:.,883,.,.:219	0/2:.,.,.,.,.,-64.5157,.,.,.,.,.,.,.,.,.:46:27:.,19,.,.:.,588,.,.:922	0/1:.,.,-84.4302,.,.,.,.,.,.,.,.,.,.,.,.:47:31:9,.,.,.:321,.,.,.:1118:31,9	.	0/2:.,.,.,.,.,-23.7478,.,.,.,.,.,.,.,.,.:25:10:.,15,.,.:.,493,.,.:354	.	.	0/1:.,.,-17.0936,.,.,.,.,.,.,.,.,.,.,.,.:18:7:9,.,.,.:306,.,.,.:251:7,9	0/2:.,.,.,.,.,-33.2705,.,.,.,.,.,.,.,.,.:20:13:.,6,.,.:.,183,.,.:440	.	.	0/1:.,.,-43.2892,.,.,.,.,.,.,.,.,.,.,.,.:47:18:24,.,.,.:860,.,.,.:641:18,24	.	0/1:.,.,-44.85,.,.,.,.,.,.,.,.,.,.,.,.:42:18:16,.,.,.:568,.,.,.:633:18,16	.	.	.	.	.	.	.	.	.
+chr1	229567663	.	C	G	366.68	.	AB=0.8;ABP=14.7363;AC=11;AF=0.5;AN=20;AO=12;CIGAR=1X;DP=320;DPB=15;DPRA=0;EPP=14.5915;EPPR=9.52472;GTI=0;LEN=1;MEANALT=1;MQM=41.3333;MQMR=42;NS=1;NUMALT=1;ODDS=2.79905;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=414;QR=109;RO=3;RPL=12;RPP=29.068;RPPR=9.52472;RPR=0;RUN=1;SAF=2;SAP=14.5915;SAR=10;SF=1,2,4,7,13,14,15,18,22,35;SRF=0;SRP=9.52472;SRR=3;TYPE=snp	GT:GL:DP:RO:AO:QA:QR	.	0/1:-31.9945,0,-5.3511:15:3:12:414:109	0/1:-33.557,0,-58.5412:37:23:14:511:825	.	0/1:-58.2186,0,-36.1148:41:16:25:879:550	.	.	0/1:-96.9811,0,-27.3008:49:13:36:1272:479	.	.	.	.	.	0/1:-21.9883,0,-50.9371:33:20:13:373:691	1/1:-98.9323,-10.235,0:34:0:34:1174:0	0/1:-61.1788,0,-48.4903:46:22:24:862:734	.	.	0/1:-45.9639,0,-12.7358:24:6:18:603:226	.	.	.	0/1:-27.456,0,-15.4705:18:7:11:382:233	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-33.5673,0,-22.713:23:10:13:458:334	.
+chr1	229567668	.	A	G	79.70	.	AB=0.3125;ABP=12.7819;AC=1;AF=0.5;AN=2;AO=10;CIGAR=1X;DP=32;DPB=32;DPRA=0;EPP=3.87889;EPPR=28.2783;GTI=0;LEN=1;MEANALT=1;MQM=40.2;MQMR=41.7273;NS=1;NUMALT=1;ODDS=18.3522;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=288;QR=762;RO=22;RPL=10;RPP=24.725;RPPR=50.7827;RPR=0;RUN=1;SAF=4;SAP=3.87889;SAR=6;SF=9;SRF=3;SRP=28.2783;SRR=19;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	0/1:-16.18,0,-57.2205:32:22:10:288:762:22,10	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr1	229568632	.	A	G	1559.10	.	AB=0.568182;ABP=4.78696;AC=20;AF=0.5;AN=34;AO=25;CIGAR=1X;DP=1954;DPB=44;DPRA=0;EPP=3.79203;EPPR=4.03889;GTI=0;LEN=1;MEANALT=1;MQM=40.8;MQMR=41.8421;NS=1;NUMALT=1;ODDS=90.7077;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=875;QR=703;RO=19;RPL=19;RPP=17.6895;RPPR=28.7251;RPR=6;RUN=1;SAF=5;SAP=22.5536;SAR=20;SF=1,4,6,7,9,10,12,13,14,15,16,18,21,22,25,27,35;SRF=6;SRP=8.61041;SRR=13;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	0/1:-62.8087,0,-48.1041:44:19:25:875:703	.	.	0/1:-246.116,0,-219.367:187:89:98:3548:3174	.	1/1:-255.47,-24.3834,0:81:0:81:2973:0:0,81	0/1:-206.93,0,-235.852:177:92:85:3016:3332	.	0/1:-107.673,0,-141.922:99:54:45:1601:1979:54,45	0/1:-115.741,0,-217.393:131:80:51:1798:2966:80,51	.	1/1:-445.993,-43.3483,0:144:0:144:5172:0:0,144	0/1:-193.075,0,-181.802:160:76:83:2807:2661	1/1:-246.364,-24.0824,0:80:0:80:2851:0	0/1:-118.339,0,-141.523:108:56:50:1775:2013	0/1:-197.082,0,-118.275:129:53:75:2724:1820:53,75	.	0/1:-114.684,0,-73.3431:75:32:43:1582:1108	.	.	0/1:-74.7815,0,-67.6231:60:29:31:1064:1007:29,31	0/1:-59.9882,0,-68.8893:54:28:26:891:989	.	.	0/1:-213.32,0,-289.476:201:112:87:3134:4045:112,87	.	0/1:-201.824,0,-204.034:169:85:84:2943:2964:85,84	.	.	.	.	.	.	.	0/1:-67.1996,0,-72.7078:55:28:27:957:1025	.
+chr1	229568637	.	C	G	1478.59	.	AB=0.567568;ABP=4.47751;AC=18;AF=0.5;AN=30;AO=21;CIGAR=1X;DP=1474;DPB=37;DPRA=0;EPP=3.94093;EPPR=3.0103;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=42;NS=1;NUMALT=1;ODDS=73.9002;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=782;QR=580;RO=16;RPL=15;RPP=11.386;RPPR=22.5536;RPR=6;RUN=1;SAF=3;SAP=26.2761;SAR=18;SF=1,4,6,9,10,12,13,14,15,16,18,21,22,25,27;SRF=6;SRP=5.18177;SRR=10;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	0/1:-56.9948,0,-39.48:37:16:21:782:580	.	.	0/1:-233.205,0,-164.354:155:67:88:3228:2433	.	1/1:-218.011,-20.169,0:67:0:67:2516:0:0,67	.	.	0/1:-94.8391,0,-121.91:84:46:38:1380:1695:46,38	0/1:-103.055,0,-192.187:115:72:43:1582:2616:72,43	.	1/1:-398.886,-37.3277,0:124:0:124:4611:0:0,124	0/1:-185.59,0,-160.83:138:65:73:2653:2325	1/1:-228.999,-21.6742,0:72:0:72:2651:0	0/1:-112.563,0,-97.068:85:39:44:1594:1407	0/1:-189.752,0,-86.789:105:36:69:2561:1365:36,69	.	0/1:-116.548,0,-54.5583:65:23:42:1570:848	.	.	0/1:-67.5208,0,-63.0919:53:26:27:965:930:26,27	0/1:-51.0966,0,-62.9963:46:24:22:774:894	.	.	0/1:-206.282,0,-259.07:182:98:82:3003:3626:98,82	.	0/1:-178.893,0,-179.8:146:73:71:2562:2597:73,71	.	.	.	.	.	.	.	.	.
+chr1	236849952	.	C	T	415.01	.	AB=0.538462;ABP=3.34437;AC=5;AF=0.5;AN=8;AO=14;CIGAR=1X;DP=99;DPB=26;DPRA=0;EPP=5.49198;EPPR=5.9056;GTI=0;LEN=1;MEANALT=1;MQM=41.7143;MQMR=42;NS=1;NUMALT=1;ODDS=51.5765;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=446;QR=438;RO=12;RPL=0;RPP=33.4109;RPPR=29.068;RPR=14;RUN=1;SAF=9;SAP=5.49198;SAR=5;SF=12,18,27,35;SRF=8;SRP=5.9056;SRR=4;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-31.62,0,-30.6892:26:12:14:446:438:12,14	.	.	.	.	.	0/1:-33.2154,0,-9.6418:18:5:13:438:168	.	.	.	.	.	.	.	.	1/1:-121.055,-12.0412,0:40:0:40:1386:0:0,40	.	.	.	.	.	.	.	0/1:-17.9214,0,-21.3018:15:8:7:255:292	.
+chr1	236882303	.	T	C	9438.91	.	AB=0;ABP=0;AC=74;AF=1;AN=74;AO=298;CIGAR=1X;DP=11452;DPB=298;DPRA=0;EPP=5.37123;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=41.9396;MQMR=0;NS=1;NUMALT=1;ODDS=417.721;PAIRED=0.993289;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=10923;QR=0;RO=0;RPL=243;RPP=260.556;RPPR=0;RPR=55;RUN=1;SAF=125;SAP=19.7991;SAR=173;SF=0,1,2,3,4,5,6,7,8,9,10,11,12,13,14,15,16,17,18,19,20,21,22,23,24,25,26,27,28,29,30,31,32,33,34,35,36;SRF=0;SRP=0;SRR=0;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	1/1:-947.186,-89.7069,0:298:0:298:10923:0:0,298	1/1:-381.71,-35.8226,0:119:0:119:4404:0	1/1:-994.322,-93.9214,0:313:0:312:11477:0	1/1:-1026.27,-95.6951,0:324:1:322:11872:17:1,322	1/1:-1102.69,-105.963,0:352:0:352:12720:0	1/1:-1277.59,-119.509,0:397:0:397:14751:0:0,397	1/1:-850.084,-80.375,0:268:0:267:9805:0:0,267	1/1:-1378.73,-129.5,0:436:1:434:15925:16	1/1:-795.198,-76.4616,0:254:0:254:9173:0	1/1:-860.147,-80.9771,0:271:0:269:9931:0:0,269	1/1:-872.694,-84.2884,0:281:0:280:10083:0:0,280	1/1:-1261.8,-121.315,0:404:0:403:14533:0	1/1:-1618.27,-153.224,0:510:0:509:18686:0:0,509	1/1:-1155.67,-110.177,0:366:0:366:13345:0	1/1:-823.5,-77.3647,0:257:0:257:9529:0	1/1:-1090.6,-103.554,0:344:0:344:12592:0	1/1:-992.028,-93.6203,0:311:0:311:11460:0:0,311	1/1:-1172.37,-109.575,0:365:0:364:13549:0	1/1:-646.734,-60.507,0:201:0:201:7471:0	1/1:-1183.43,-111.788,0:376:1:375:13702:14	1/1:-1255.75,-119.509,0:398:0:397:14641:0:0,397	1/1:-464.968,-43.6494,0:145:0:145:5353:0:0,145	1/1:-522.341,-49.3689,0:164:0:164:6007:0	1/1:-1184.45,-112.284,0:374:0:373:13752:0	1/1:-488.965,-46.0576,0:154:0:153:5637:0:0,153	1/1:-1508.47,-143.892,0:480:0:478:17424:0:0,478	1/1:-1198.04,-116.749,0:393:1:391:13897:15	1/1:-1331.74,-127.035,0:422:0:422:15381:0:0,422	1/1:-655.224,-61.9736,0:212:1:210:7561:17	1/1:-1393.62,-133.657,0:445:0:444:16079:0	1/1:-765.935,-71.9462,0:241:0:239:8856:0	1/1:-770.987,-71.3599,0:246:1:241:8915:17	1/1:-924.364,-87.5997,0:291:0:291:10704:0	1/1:-952.42,-89.7069,0:300:0:298:10990:0	1/1:-799.822,-75.8596,0:252:0:252:9240:0	1/1:-532.325,-49.67,0:165:0:165:6139:0	1/1:-1027.95,-96.9317,0:323:0:322:11893:0
+chr1	236883421	.	C	T	3556.23	.	AB=0;ABP=0;AC=74;AF=1;AN=74;AO=116;CIGAR=1X;DP=4129;DPB=116;DPRA=0;EPP=9.07545;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=41.5;MQMR=0;NS=1;NUMALT=1;ODDS=165.415;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=4413;QR=0;RO=0;RPL=68;RPP=10.4981;RPPR=0;RPR=48;RUN=1;SAF=53;SAP=4.88226;SAR=63;SF=0,1,2,3,4,5,6,7,8,9,10,11,12,13,14,15,16,17,18,19,20,21,22,23,24,25,26,27,28,29,30,31,32,33,34,35,36;SRF=0;SRP=0;SRR=0;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	1/1:-377.513,-34.9195,0:116:0:116:4413:0:0,116	1/1:-170.127,-15.6536,0:52:0:52:1967:0	1/1:-357.256,-33.7154,0:112:0:112:4192:0	1/1:-345.89,-31.9092,0:107:0:106:4060:0:0,106	1/1:-337.494,-31.3071,0:104:0:104:3956:0	1/1:-412.361,-38.5318,0:128:0:128:4809:0:0,128	1/1:-258.152,-23.4803,0:78:0:78:2996:0:0,78	1/1:-489.416,-45.4555,0:152:0:151:5705:0	1/1:-251.978,-23.4803,0:78:0:78:2940:0	1/1:-332.283,-30.7051,0:102:0:102:3863:0:0,102	1/1:-352.745,-33.4143,0:111:0:111:4173:0:0,111	1/1:-575.388,-53.8844,0:179:0:179:6682:0	1/1:-518.424,-48.4658,0:161:0:161:6034:0:0,161	1/1:-537.885,-51.1751,0:170:0:170:6295:0	1/1:-314.22,-28.8989,0:96:0:96:3672:0	1/1:-366.274,-33.7154,0:112:0:112:4279:0	1/1:-313.022,-29.1999,0:97:0:97:3640:0:0,97	1/1:-353.643,-32.5112,0:109:0:108:4116:0	1/1:-237.749,-21.9752,0:73:0:73:2785:0	1/1:-337.608,-30.7051,0:102:0:102:3920:0	1/1:-363.961,-33.7154,0:113:0:112:4230:0:0,112	1/1:-213.251,-20.169,0:67:0:67:2461:0:0,67	1/1:-271.152,-25.8886,0:86:0:86:3166:0	1/1:-324.63,-29.802,0:99:0:99:3766:0	1/1:-252.327,-22.8783,0:76:0:76:2925:0:0,76	1/1:-641.271,-59.0019,0:196:0:196:7460:0:0,196	1/1:-430.986,-40.6391,0:135:0:135:5011:0	1/1:-539.957,-50.272,0:167:0:167:6267:0:0,167	1/1:-312.701,-28.8989,0:96:0:96:3617:0	1/1:-589.08,-54.7875,0:182:0:182:6917:0	1/1:-341.752,-31.6082,0:105:0:105:3981:0	1/1:-311.526,-29.5009,0:98:0:98:3654:0	1/1:-324.473,-30.7051,0:103:0:102:3794:0	1/1:-295.801,-27.3937,0:91:0:91:3465:0	1/1:-340.128,-31.6082,0:105:0:105:3954:0	1/1:-230.713,-21.0721,0:70:0:70:2669:0	1/1:-330.7,-30.404,0:101:0:101:3845:0
+chr1	236894647	.	G	A	1920.37	.	AB=0.477477;ABP=3.49937;AC=29;AF=0.5;AN=48;AO=53;CIGAR=1X;DP=3036;DPB=111;DPRA=0;EPP=3.37904;EPPR=3.16006;GTI=0;LEN=1;MEANALT=1;MQM=41.6226;MQMR=42;NS=1;NUMALT=1;ODDS=299.34;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1999;QR=2085;RO=58;RPL=38;RPP=24.6841;RPPR=32.3626;RPR=15;RUN=1;SAF=18;SAP=14.851;SAR=35;SF=0,2,4,5,6,7,8,9,11,12,13,14,16,17,19,20,21,24,25,27,31,32,33,34;SRF=19;SRP=17.986;SRR=39;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	0/1:-139.473,0,-147.278:111:58:53:1999:2085:58,53	.	0/1:-150.354,0,-130.954:107:50:57:2114:1889	.	0/1:-150.888,0,-189.536:129:70:58:2222:2638	1/1:-456.958,-42.4452,0:141:0:141:5322:0:0,141	1/1:-372.478,-30.964,0:115:1:114:4356:38:1,114	0/1:-242.96,0,-219.941:176:85:91:3425:3154	1/1:-278.977,-25.8886,0:87:0:86:3230:0	0/1:-121.31,0,-145.649:100:54:46:1753:2032:54,46	.	1/1:-505.271,-47.8638,0:160:0:159:5843:0	0/1:-239.49,0,-304.742:207:113:94:3535:4245:113,94	0/1:-223.752,0,-222.961:171:84:87:3193:3176	0/1:-114.395,0,-99.7179:81:39:42:1602:1429	.	0/1:-132.099,0,-142.935:104:53:51:1951:2013:53,51	0/1:-190.799,0,-234.657:160:86:73:2765:3277	.	0/1:-137.041,0,-202.918:129:74:54:2032:2810	0/1:-135.365,0,-195.786:127:74:53:2018:2721:74,53	0/1:-28.9404,0,-122.715:60:45:15:556:1637:45,15	.	.	0/1:-43.6291,0,-70.8181:44:26:18:654:968:26,18	0/1:-255.965,0,-318.399:218:119:99:3731:4444:119,99	.	0/1:-263.225,0,-211.363:178:81:97:3667:3062:81,97	.	.	.	1/1:-251.334,-20.6598,0:81:1:80:2946:39	0/1:-146.434,0,-118.68:102:47:55:2049:1749	0/1:-136.441,0,-175.446:118:65:53:1989:2437	0/1:-189.706,0,-159.623:130:60:70:2643:2300	.	.
+chr1	236899042	.	G	A	3767.59	.	AB=0.520505;ABP=4.16796;AC=9;AF=0.5;AN=18;AO=165;CIGAR=1X;DP=2843;DPB=317;DPRA=0;EPP=3.65516;EPPR=3.71495;GTI=0;LEN=1;MEANALT=2;MQM=42;MQMR=41.8609;NS=1;NUMALT=1;ODDS=809.438;PAIRED=1;PAIREDR=0.993377;PAO=0;PQA=0;PQR=0;PRO=0;QA=5976;QR=5431;RO=151;RPL=144;RPP=202.115;RPPR=173.866;RPR=21;RUN=1;SAF=69;SAP=12.6043;SAR=96;SF=0,4,6,11,12,14,27,33,35;SRF=64;SRP=10.6176;SRR=87;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	0/1:-423.538,0,-378.261:317:151:165:5976:5431:151,165	.	.	.	0/1:-409.712,0,-442.141:338:172:166:5901:6252	.	0/1:-346.487,0,-307.936:261:126:135:4907:4447:126,135	.	.	.	.	0/1:-500.727,0,-476.553:403:194:206:7150:6870	0/1:-543.852,0,-650.581:472:252:218:7922:9107:252,218	.	0/1:-288.732,0,-279.732:223:111:112:4101:3981	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-555.176,0,-439.777:397:180:216:7770:6411:180,216	.	.	.	.	.	0/1:-402.395,0,-300.4:281:123:158:5601:4417	.	0/1:-165.008,0,-212.268:151:83:68:2416:2955	.
+chr1	236900554	.	C	T	1579.16	.	AB=0.507463;ABP=3.04271;AC=6;AF=0.5;AN=12;AO=34;CIGAR=1X;DP=969;DPB=67;DPRA=0;EPP=28.557;EPPR=22.0271;GTI=0;LEN=1;MEANALT=1;MQM=41.3824;MQMR=42;NS=1;NUMALT=1;ODDS=146.883;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1265;QR=1174;RO=33;RPL=34;RPP=76.8404;RPPR=74.6689;RPR=0;RUN=1;SAF=7;SAP=28.557;SAR=27;SF=1,2,8,13,17,34;SRF=8;SRP=22.0271;SRR=25;TYPE=snp	GT:GL:DP:RO:AO:QA:QR	.	0/1:-89.5737,0,-82.3235:67:33:34:1265:1174	0/1:-196.857,0,-250.553:178:98:80:2911:3513	.	.	.	.	.	0/1:-164.346,0,-225.056:156:86:69:2514:3134	.	.	.	.	0/1:-256.332,0,-287.9:217:113:103:3730:4116	.	.	.	0/1:-281.046,0,-206.146:194:84:109:3981:3037	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-155.752,0,-246.215:157:93:64:2353:3369	.	.
+chr1	236902594	.	C	G	6944.79	.	AB=0.45283;ABP=8.1317;AC=58;AF=0.5;AN=68;AO=120;CIGAR=1X;DP=9870;DPB=265;DPRA=0;EPP=34.9309;EPPR=61.793;GTI=0;LEN=1;MEANALT=3;MQM=41.9333;MQMR=41.5352;NS=1;NUMALT=1;ODDS=631.447;PAIRED=0.991667;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=4180;QR=4963;RO=142;RPL=63;RPP=3.66174;RPPR=3.25497;RPR=57;RUN=1;SAF=66;SAP=5.61607;SAR=54;SF=0,1,2,3,4,5,7,8,9,10,11,13,14,15,16,17,18,19,20,21,22,23,24,25,26,27,28,29,30,31,32,34,35,36;SRF=83;SRP=11.8185;SRR=59;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	0/1:-284.913,0,-352.847:265:142:120:4180:4963:142,120	1/1:-267.321,-23.4382,0:90:1:89:3155:38	1/1:-756.547,-75.5585,0:251:0:251:8714:0	1/1:-733.439,-71.6451,0:240:0:238:8479:0:0,238	0/1:-424.002,0,-425.728:349:172:176:6093:6129	1/1:-1084.38,-105.662,0:353:0:351:12702:0:0,351	.	0/1:-410.018,0,-414.699:347:172:171:5921:5991	1/1:-702.644,-68.0328,0:226:0:226:8101:0	1/1:-622.66,-62.0122,0:206:0:206:7240:0:0,206	1/1:-809.059,-74.8452,0:261:1:260:9386:39:1,260	0/1:-536.604,0,-536.639:456:230:222:7810:7757	.	1/1:-1041.13,-102.619,0:346:1:345:12057:16	0/1:-301.524,0,-287.939:248:116:128:4333:4155	1/1:-909.797,-85.6978,0:301:2:297:10642:49	1/1:-945.925,-91.2121,0:304:0:303:10968:0:0,303	1/1:-1095.69,-108.371,0:360:0:360:12646:0	1/1:-645.405,-64.1194,0:213:0:213:7435:0	1/1:-768.238,-75.5585,0:253:0:251:8882:0	1/1:-1082.32,-105.662,0:351:0:351:12556:0:0,351	1/1:-579.789,-59.6039,0:198:0:198:6678:0:0,198	1/1:-593.269,-62.0122,0:206:0:206:6846:0	1/1:-901.333,-89.7069,0:299:0:298:10394:0	0/1:-190.549,0,-180.856:152:74:77:2710:2599:74,77	1/1:-1710.72,-170.14,0:571:1:569:19869:16:1,569	1/1:-1087.73,-111.536,0:375:1:374:12706:14	0/1:-458.81,0,-635.289:464:262:202:6895:8907:262,202	1/1:-635.618,-65.3235,0:218:0:217:7429:0	1/1:-1401.18,-140.581,0:471:0:467:16314:0	1/1:-721.85,-71.362,0:238:1:237:8310:14	0/1:-266.332,0,-321.623:257:140:116:3951:4582	0/1:-300.723,0,-389.703:287:156:131:4519:5459	.	1/1:-723.615,-71.6451,0:239:0:238:8349:0	0/1:-202.901,0,-248.866:190:100:88:3006:3509	1/1:-853.266,-84.823,0:285:1:283:9928:36
+chr1	236907966	.	G	A	5102.44	.	AB=0.525773;ABP=5.24893;AC=4;AF=0.5;AN=8;AO=204;CIGAR=1X;DP=1572;DPB=388;DPRA=0;EPP=3.18061;EPPR=5.32339;GTI=0;LEN=1;MEANALT=1;MQM=41.3922;MQMR=41.7011;NS=1;NUMALT=1;ODDS=1041.04;PAIRED=0.97549;PAIREDR=0.994565;PAO=0;PQA=0;PQR=0;PRO=0;QA=7393;QR=6694;RO=184;RPL=125;RPP=25.534;RPPR=37.4234;RPR=79;RUN=1;SAF=95;SAP=5.09662;SAR=109;SF=2,8,13,17;SRF=84;SRP=6.03148;SRR=100;TYPE=snp	GT:GL:DP:RO:AO:QA:QR	.	.	0/1:-522.93,0,-463.43:388:184:204:7393:6694	.	.	.	.	.	0/1:-401.007,0,-361.956:297:144:152:5662:5198	.	.	.	.	0/1:-527.51,0,-507.914:411:202:209:7518:7262	.	.	.	0/1:-634.498,0,-584.333:476:230:245:8992:8383	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr1	236914754	.	T	C	2615.40	.	AB=0.45815;ABP=6.46361;AC=1;AF=0.5;AN=2;AO=104;CIGAR=1X;DP=227;DPB=227;DPRA=0;EPP=8.35546;EPPR=8.11238;GTI=0;LEN=1;MEANALT=1;MQM=41.7788;MQMR=41.5447;NS=1;NUMALT=1;ODDS=602.219;PAIRED=0.932692;PAIREDR=0.95122;PAO=0;PQA=0;PQR=0;PRO=0;QA=3915;QR=4581;RO=123;RPL=59;RPP=7.10269;RPPR=19.976;RPR=45;RUN=1;SAF=51;SAP=3.09382;SAR=53;SF=32;SRF=59;SRP=3.45166;SRR=64;TYPE=snp	GT:GL:DP:RO:AO:QA:QR	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-269.43,0,-325.224:227:123:104:3915:4581	.	.	.	.
+chr1	236925844	.	G	A	4071.93	.	AB=0.5;ABP=3.0103;AC=13;AF=0.5;AN=26;AO=164;CIGAR=1X;DP=4506;DPB=328;DPRA=0;EPP=8.30657;EPPR=6.00773;GTI=0;LEN=1;MEANALT=2;MQM=41.0549;MQMR=41.5276;NS=1;NUMALT=1;ODDS=873.775;PAIRED=0.97561;PAIREDR=0.98773;PAO=0;PQA=0;PQR=0;PRO=0;QA=5942;QR=5585;RO=163;RPL=112;RPP=50.6768;RPPR=6.00773;RPR=52;RUN=1;SAF=80;SAP=3.22215;SAR=84;SF=2,8,10,11,12,13,16,17,19,20,31,33,36;SRF=78;SRP=3.66307;SRR=85;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	0/1:-408.262,0,-387.108:328:163:164:5942:5585	.	.	.	.	.	0/1:-380.549,0,-368.352:297:146:151:5405:5257	.	0/1:-320.753,0,-495.039:327:190:136:4822:6816:190,136	0/1:-443.244,0,-489.467:384:202:182:6456:6969	0/1:-575.349,0,-618.888:480:247:231:8366:8769:247,231	0/1:-308.971,0,-438.927:305:173:132:4628:6090	.	.	0/1:-481.64,0,-387.376:346:160:186:6768:5647:160,186	0/1:-508.287,0,-497.42:407:200:204:7290:7105	.	0/1:-437.14,0,-382.88:324:155:168:6164:5519	0/1:-623.541,0,-478.36:441:196:245:8730:7014:196,245	.	.	.	.	.	.	.	.	.	.	0/1:-236.194,0,-271.688:210:110:99:3449:3834	.	0/1:-316.118,0,-397.128:287:156:131:4662:5543	.	.	0/1:-392.457,0,-519.719:370:206:164:5809:7307
+chr1	237527741	.	G	T	415.72	.	AB=0.527778;ABP=3.25157;AC=1;AF=0.5;AN=2;AO=19;CIGAR=1X;DP=36;DPB=36;DPRA=0;EPP=5.8675;EPPR=6.20364;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=42;NS=1;NUMALT=1;ODDS=86.6167;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=691;QR=645;RO=17;RPL=15;RPP=16.8392;RPPR=24.5973;RPR=4;RUN=1;SAF=3;SAP=22.325;SAR=16;SF=24;SRF=4;SRP=13.3567;SRR=13;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-49.4023,0,-45.3155:36:17:19:691:645:17,19	.	.	.	.	.	.	.	.	.	.	.	.
+chr1	237540615	.	A	C	1156.73	.	AB=0.58427;ABP=8.49998;AC=11;AF=0.5;AN=20;AO=52;CIGAR=1X;DP=801;DPB=89;DPRA=0;EPP=35.7494;EPPR=3.5385;GTI=0;LEN=1;MEANALT=1;MQM=41.9615;MQMR=42;NS=1;NUMALT=1;ODDS=187.614;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1929;QR=1345;RO=37;RPL=18;RPP=13.7006;RPPR=24.1968;RPR=34;RUN=1;SAF=28;SAP=3.67845;SAR=24;SF=5,8,9,11,13,14,24,26,32,36;SRF=20;SRP=3.5385;SRR=17;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	0/1:-140.344,0,-90.0156:89:37:52:1929:1345:37,52	.	.	0/1:-112.24,0,-67.6318:68:27:41:1531:1017	0/1:-51.5279,0,-72.2776:49:28:21:763:1028:28,21	.	0/1:-120.937,0,-194.38:124:72:52:1832:2677	.	1/1:-280.596,-26.4906,0:88:0:88:3235:0	0/1:-77.2311,0,-74.1191:60:29:30:1097:1081	.	.	.	.	.	.	.	.	.	0/1:-71.3014,0,-28.3938:37:12:25:950:452:12,25	.	0/1:-204.071,0,-133.211:133:54:79:2841:1998	.	.	.	.	.	0/1:-102.576,0,-126.673:86:46:40:1480:1764	.	.	.	0/1:-89.6869,0,-83.2311:67:32:35:1264:1192
+chr1	237551376	.	T	A	4522.38	.	AB=0.530516;ABP=4.73321;AC=40;AF=0.5;AN=60;AO=113;CIGAR=1X;DP=7299;DPB=213;DPRA=0;EPP=8.56389;EPPR=22.5536;GTI=0;LEN=1;MEANALT=1;MQM=41.6637;MQMR=42;NS=1;NUMALT=1;ODDS=588.426;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=4228;QR=3805;RO=100;RPL=44;RPP=15.0207;RPPR=10.0459;RPR=69;RUN=1;SAF=62;SAP=5.3355;SAR=51;SF=0,1,2,3,5,6,7,8,9,10,11,12,13,14,18,19,20,21,22,23,24,25,26,27,28,29,30,31,33,36;SRF=56;SRP=6.13722;SRR=44;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	0/1:-300.087,0,-265.257:213:100:113:4228:3805:100,113	1/1:-280.124,-25.8886,0:86:0:86:3240:0	1/1:-747.037,-68.3403,0:232:1:231:8696:15	1/1:-900.813,-83.0843,0:276:0:276:10442:0:0,276	.	0/1:-330.945,0,-440.647:294:163:131:4884:6113:163,131	0/1:-317.113,0,-241.079:211:95:116:4411:3511:95,116	0/1:-434.7,0,-497.182:354:187:166:6281:6991	0/1:-285.669,0,-263.942:207:101:106:4034:3781	0/1:-249.371,0,-245.766:187:93:94:3539:3488:93,94	0/1:-316.381,0,-283.227:226:109:117:4456:4054:109,117	0/1:-378.071,0,-457.054:319:171:148:5490:6378	1/1:-1129.55,-104.457,0:347:0:347:13099:0:0,347	0/1:-292.149,0,-425.268:275:156:119:4348:5880	0/1:-248.706,0,-154.595:150:61:89:3405:2303	.	.	.	0/1:-149.672,0,-263.332:158:95:63:2277:3591	0/1:-308.568,0,-351.652:251:132:119:4464:4930	0/1:-423.879,0,-444.886:335:171:163:6106:6328:171,163	1/1:-415.302,-38.8329,0:129:0:129:4818:0:0,129	1/1:-389.027,-35.8226,0:119:0:119:4499:0	1/1:-890.112,-82.4822,0:275:0:274:10358:0	0/1:-268.916,0,-196.667:175:76:99:3721:2882:76,99	0/1:-506.508,0,-551.004:405:209:195:7276:7766:209,195	0/1:-378.583,0,-370.032:293:145:148:5402:5276	0/1:-448.93,0,-427.243:341:166:173:6394:6136:166,173	1/1:-643.86,-59.905,0:199:0:199:7456:0	1/1:-1199.14,-112.284,0:373:0:373:13894:0	1/1:-646.815,-59.3029,0:197:0:197:7492:0	0/1:-291.695,0,-283.589:217:108:109:4128:4026	.	0/1:-353.803,0,-171.508:197:70:127:4783:2666	.	.	0/1:-318.455,0,-365.343:258:137:121:4582:5117
+chr1	237586384	.	T	C	2093.26	.	AB=0.564626;ABP=8.34296;AC=10;AF=0.5;AN=18;AO=83;CIGAR=1X;DP=1345;DPB=147;DPRA=0;EPP=5.12945;EPPR=11.6962;GTI=0;LEN=1;MEANALT=1;MQM=41.7831;MQMR=41.4375;NS=1;NUMALT=1;ODDS=347.63;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3106;QR=2389;RO=64;RPL=30;RPP=16.8502;RPPR=3.14602;RPR=53;RUN=1;SAF=53;SAP=16.8502;SAR=30;SF=3,4,8,13,23,26,31,34,36;SRF=43;SRP=19.4321;SRR=21;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	0/1:-224.392,0,-160.222:147:64:83:3106:2389:64,83	0/1:-206.118,0,-155.599:134:59:75:2853:2269	.	.	.	0/1:-108.905,0,-206.235:120:75:45:1675:2803	.	.	.	.	0/1:-245.729,0,-319.81:215:118:95:3584:4447	.	.	.	.	.	.	.	.	.	0/1:-187.592,0,-227.899:158:84:73:2714:3189	.	.	0/1:-213.701,0,-217.068:169:84:85:3052:3092	.	.	.	.	0/1:-110.585,0,-171.877:111:64:47:1659:2369	.	.	1/1:-440.643,-41.2411,0:137:0:137:5160:0	.	0/1:-234.909,0,-169.662:154:66:88:3248:2502
+chr1	237608842	.	C	T	4033.93	.	AB=0.485119;ABP=3.65657;AC=1;AF=0.5;AN=2;AO=163;CIGAR=1X;DP=336;DPB=336;DPRA=0;EPP=40.4316;EPPR=84.7598;GTI=0;LEN=1;MEANALT=2;MQM=42;MQMR=41.9765;NS=1;NUMALT=1;ODDS=928.846;PAIRED=0.993865;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=5962;QR=6258;RO=170;RPL=101;RPP=23.2729;RPPR=25.5425;RPR=62;RUN=1;SAF=92;SAP=8.88527;SAR=71;SF=13;SRF=97;SRP=10.3678;SRR=73;TYPE=snp	GT:GL:DP:RO:AO:QA:QR	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-416.804,0,-442.003:336:170:163:5962:6258	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr1	237617757	.	C	T	4611.20	.	AB=0.478992;ABP=3.92268;AC=40;AF=0.5;AN=62;AO=114;CIGAR=1X;DP=7960;DPB=238;DPRA=0;EPP=12.2295;EPPR=23.254;GTI=0;LEN=1;MEANALT=1;MQM=41.9825;MQMR=42;NS=1;NUMALT=1;ODDS=661.557;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=4232;QR=4601;RO=124;RPL=51;RPP=5.75321;RPPR=23.254;RPR=63;RUN=1;SAF=55;SAP=3.31507;SAR=59;SF=0,1,3,4,5,6,7,9,10,12,15,16,17,18,19,20,21,22,23,24,25,26,27,28,29,30,32,33,34,35,36;SRF=64;SRP=3.29049;SRR=60;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	0/1:-295.293,0,-327.338:238:124:114:4232:4601:124,114	0/1:-91.6152,0,-115.761:80:44:36:1332:1610	.	0/1:-266.425,0,-346.757:236:132:104:3898:4826:132,104	0/1:-275.408,0,-463.819:285:172:113:4200:6367	0/1:-384.495,0,-421.274:311:163:148:5522:5945:163,148	0/1:-247.887,0,-246.512:193:98:95:3530:3505:98,95	0/1:-413.897,0,-503.705:359:195:164:6032:7066	.	0/1:-257.491,0,-299.151:219:116:103:3728:4225:116,103	0/1:-320.17,0,-261.804:222:102:120:4474:3796:102,120	.	1/1:-1093.4,-101.58,0:348:2:345:12685:32:2,345	.	.	0/1:-354.472,0,-418.195:298:158:138:5152:5854	0/1:-338.069,0,-369.23:273:140:131:4858:5213:140,131	0/1:-440.638,0,-319.341:297:131:166:6140:4715	0/1:-230.307,0,-221.429:173:85:88:3259:3160	1/1:-868.466,-81.8802,0:272:0:272:10050:0	0/1:-409.68,0,-483.39:348:184:162:5939:6786:184,162	0/1:-371.358,0,-73.9692:177:41:136:4904:1459:41,136	1/1:-544.075,-52.6803,0:175:0:175:6273:0	1/1:-1022.04,-95.7275,0:318:0:318:11813:0	0/1:-142.152,0,-177.494:124:67:57:2067:2479:67,57	1/1:-1245.01,-118.305,0:395:0:393:14368:0:0,393	0/1:-383.972,0,-407.061:324:163:157:5560:5823	1/1:-1020.13,-97.7148,0:332:1:329:11792:18:1,329	1/1:-599.651,-57.1019,0:195:1:194:6921:16	0/1:-443.505,0,-489.282:375:194:178:6453:6968	0/1:-318.461,0,-332.453:253:129:124:4563:4707	.	0/1:-364.343,0,-247.162:233:98:135:5013:3661	0/1:-221.769,0,-305.648:204:114:90:3261:4234	1/1:-720.626,-67.7318,0:226:0:225:8317:0	1/1:-484.517,-46.3586,0:154:0:154:5604:0	0/1:-413.702,0,-415.738:323:162:161:5917:5917
+chr1	237619993	.	G	A	6852.59	.	AB=0.574153;ABP=25.5531;AC=1;AF=0.5;AN=2;AO=271;CIGAR=1X;DP=472;DPB=472;DPRA=0;EPP=23.8516;EPPR=56.2114;GTI=0;LEN=1;MEANALT=2;MQM=41.9631;MQMR=41.7;NS=1;NUMALT=1;ODDS=1061.28;PAIRED=1;PAIREDR=0.99;PAO=0;PQA=0;PQR=0;PRO=0;QA=10033;QR=7328;RO=200;RPL=49;RPP=242.826;RPPR=129.651;RPR=222;RUN=1;SAF=162;SAP=25.5183;SAR=109;SF=25;SRF=127;SRP=34.6704;SRR=73;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-725.154,0,-492.302:472:200:271:10033:7328:200,271	.	.	.	.	.	.	.	.	.	.	.
+chr1	237620049	.	T	C	4532.38	.	AB=0.487923;ABP=3.27256;AC=39;AF=0.5;AN=62;AO=101;CIGAR=1X;DP=7925;DPB=207;DPRA=0;EPP=35.7114;EPPR=31.3222;GTI=0;LEN=1;MEANALT=2;MQM=42;MQMR=41.8286;NS=1;NUMALT=1;ODDS=568.16;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3792;QR=3877;RO=105;RPL=82;RPP=88.3427;RPPR=79.9631;RPR=19;RUN=1;SAF=53;SAP=3.54779;SAR=48;SF=0,1,3,4,5,6,7,9,10,12,15,16,17,18,19,20,21,22,23,24,25,26,27,28,29,30,32,33,34,35,36;SRF=51;SRP=3.19643;SRR=54;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	0/1:-265.79,0,-273.639:207:105:101:3792:3877:105,101	0/1:-157.082,0,-160.289:119:60:59:2231:2267	.	0/1:-243.13,0,-320.878:217:120:96:3565:4491:120,96	0/1:-415.221,0,-313.366:282:126:156:5786:4608	0/1:-424.462,0,-293.082:278:118:160:5929:4393:118,160	0/1:-339.517,0,-278.861:234:107:127:4746:4038:107,127	0/1:-422.945,0,-432.776:329:165:163:6060:6174	.	0/1:-245.53,0,-230.061:186:90:96:3527:3321:90,96	0/1:-350.87,0,-280.411:246:112:134:4937:4139:112,134	.	1/1:-994.089,-93.0183,0:309:0:309:11549:0:0,309	.	.	0/1:-396.111,0,-322.694:274:126:148:5560:4684	0/1:-402.963,0,-255.553:253:103:149:5544:3837:103,149	0/1:-397.632,0,-315.542:271:121:150:5605:4594	0/1:-171.469,0,-212.765:147:79:67:2489:2970	1/1:-828.156,-78.2678,0:261:0:260:9626:0	0/1:-383.478,0,-349.966:282:135:146:5418:5027:135,146	0/1:-320.337,0,-95.3102:164:47:117:4262:1681:47,117	1/1:-470.808,-44.5524,0:148:0:148:5434:0	1/1:-952.597,-88.8039,0:295:0:295:11033:0	0/1:-170.929,0,-141.266:125:58:67:2404:2061:58,67	1/1:-1621.77,-152.321,0:514:1:511:18801:20:1,511	0/1:-436.101,0,-478.8:362:186:175:6317:6784	1/1:-1197.14,-112.585,0:374:0:374:13875:0:0,374	1/1:-679.872,-64.4204,0:214:0:214:7858:0	0/1:-519.903,0,-532.104:411:204:206:7467:7598	0/1:-269.139,0,-389.773:252:144:108:3999:5383	.	0/1:-263.717,0,-291.819:213:111:101:3785:4113	0/1:-249.278,0,-331.946:222:125:97:3656:4637	0/1:-382.774,0,-305.099:260:117:143:5343:4435	1/1:-531.884,-50.573,0:168:0:168:6141:0	0/1:-368.082,0,-421.76:308:164:143:5324:5989
+chr1	237632512	.	T	C	1310.24	.	AB=0.449438;ABP=6.96287;AC=1;AF=0.5;AN=2;AO=80;CIGAR=1X;DP=178;DPB=178;DPRA=0;EPP=11.8048;EPPR=20.744;GTI=0;LEN=1;MEANALT=3;MQM=36.65;MQMR=37.9167;NS=1;NUMALT=1;ODDS=301.695;PAIRED=0.9875;PAIREDR=0.96875;PAO=0;PQA=0;PQR=0;PRO=0;QA=2356;QR=3002;RO=96;RPL=34;RPP=6.91895;RPPR=7.44372;RPR=46;RUN=1;SAF=25;SAP=27.4394;SAR=55;SF=12;SRF=33;SRP=23.3679;SRR=63;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-141.447,0,-201.676:178:96:80:2356:3002:96,80	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr1	237655173	.	A	T	535.48	.	AB=0.432432;ABP=4.47751;AC=6;AF=0.5;AN=12;AO=16;CIGAR=1X;DP=301;DPB=37;DPRA=0;EPP=3.55317;EPPR=3.94093;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=42;NS=1;NUMALT=1;ODDS=83.5927;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=608;QR=775;RO=21;RPL=7;RPP=3.55317;RPPR=3.94093;RPR=9;RUN=1;SAF=10;SAP=5.18177;SAR=6;SF=1,6,10,30,35,36;SRF=11;SRP=3.1137;SRR=10;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	0/1:-41.7612,0,-56.2118:37:21:16:608:775	.	.	.	.	0/1:-71.3275,0,-86.7854:60:33:27:1031:1206:33,27	.	.	.	0/1:-93.8091,0,-26.3978:45:12:33:1248:459:12,33	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-44.1166,0,-59.565:41:22:19:661:826	.	.	.	.	0/1:-29.1577,0,-91.123:46:33:13:493:1210	0/1:-84.9374,0,-87.4813:72:37:34:1226:1262
+chr1	237656289	.	C	T	2627.44	.	AB=0.509259;ABP=3.17115;AC=1;AF=0.5;AN=2;AO=110;CIGAR=1X;DP=216;DPB=216;DPRA=0;EPP=5.85295;EPPR=11.2045;GTI=0;LEN=1;MEANALT=1;MQM=41.9273;MQMR=41.2264;NS=1;NUMALT=1;ODDS=577.147;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3955;QR=3906;RO=106;RPL=31;RPP=48.4928;RPPR=46.3578;RPR=79;RUN=1;SAF=78;SAP=44.7815;SAR=32;SF=25;SRF=81;SRP=67.2531;SRR=25;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-278.594,0,-269.215:216:106:110:3955:3906:106,110	.	.	.	.	.	.	.	.	.	.	.
+chr1	237670107	.	A	G	595.36	.	AB=0.451613;ABP=4.27115;AC=1;AF=0.5;AN=2;AO=28;CIGAR=1X;DP=62;DPB=62;DPRA=0;EPP=22.8638;EPPR=4.03217;GTI=0;LEN=1;MEANALT=1;MQM=41.2143;MQMR=41.9412;NS=1;NUMALT=1;ODDS=137.087;PAIRED=0.964286;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1009;QR=1283;RO=34;RPL=13;RPP=3.32051;RPPR=19.3602;RPR=15;RUN=1;SAF=9;SAP=10.7656;SAR=19;SF=12;SRF=12;SRP=9.39698;SRR=22;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-67.9543,0,-92.6278:62:34:28:1009:1283:34,28	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr1	237670140	.	A	G	667.55	.	AB=0.333333;ABP=7.35324;AC=43;AF=0.5;AN=64;AO=6;CIGAR=1X;DP=1194;DPB=18;DPRA=0;EPP=3.0103;EPPR=3.73412;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=42;NS=1;NUMALT=1;ODDS=20.4941;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=231;QR=454;RO=12;RPL=3;RPP=3.0103;RPPR=9.52472;RPR=3;RUN=1;SAF=0;SAP=16.0391;SAR=6;SF=1,2,3,4,5,6,7,8,9,10,11,12,13,14,15,16,17,18,20,21,22,24,25,26,27,29,30,31,32,34,35,36;SRF=4;SRP=5.9056;SRR=8;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	0/1:-14.8668,0,-34.2183:18:12:6:231:454	0/1:-44.3487,0,-54.3407:37:20:17:653:768	0/1:-39.3105,0,-38.9305:30:15:15:570:552:15,15	0/1:-47.3654,0,-35.6258:31:14:17:654:517	1/1:-127.717,-11.7402,0:39:0:39:1490:0:0,39	1/1:-74.3739,-7.22472,0:24:0:24:873:0:0,24	0/1:-58.1713,0,-40.8957:40:17:22:822:606	0/1:-54.9479,0,-39.2731:35:15:20:769:573	0/1:-17.9132,0,-49.0117:25:17:8:289:651:17,8	0/1:-40.4735,0,-47.5675:34:18:16:601:665:18,16	0/1:-104.912,0,-63.9294:65:26:39:1462:973	1/1:-152.179,-14.1484,0:47:0:47:1769:0:0,47	0/1:-79.096,0,-59.7968:53:23:29:1096:886	1/1:-83.4441,-8.12781,0:27:0:27:960:0	0/1:-39.9872,0,-38.6795:31:15:16:580:552	0/1:-50.0292,0,-62.6302:43:23:20:737:888:23,20	1/1:-148.265,-13.8474,0:46:0:46:1712:0	0/1:-37.1543,0,-30.9095:27:13:14:534:491	.	0/1:-34.1487,0,-39.4757:29:15:14:506:555:15,14	1/1:-114.806,-11.1381,0:37:0:37:1318:0:0,37	1/1:-135.318,-12.9443,0:43:0:43:1571:0	.	0/1:-27.9859,0,-6.51264:13:3:10:364:117:3,10	0/1:-95.4669,0,-92.4485:72:35:37:1377:1317:35,37	1/1:-191.081,-18.9649,0:63:0:63:2215:0	1/1:-134.666,-13.2453,0:45:0:44:1586:0:0,44	.	0/1:-61.1528,0,-103.814:64:38:26:957:1443	0/1:-27.7928,0,-18.7958:20:8:12:401:282	0/1:-32.8036,0,-57.6913:35:21:14:509:788	0/1:-32.1388,0,-10.5638:17:5:12:428:193	.	1/1:-109.082,-10.235,0:34:0:34:1268:0	1/1:-98.3305,-9.0309,0:30:0:30:1151:0	0/1:-50.9448,0,-54.0117:40:20:20:733:762
+chr1	237711797	.	A	G	6290.60	.	AB=0;ABP=0;AC=69;AF=1;AN=72;AO=206;CIGAR=1X;DP=7743;DPB=206;DPRA=0;EPP=40.9584;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=41.733;MQMR=0;NS=1;NUMALT=1;ODDS=290.182;PAIRED=0.990291;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=7541;QR=0;RO=0;RPL=56;RPP=96.1517;RPPR=0;RPR=150;RUN=1;SAF=113;SAP=7.22675;SAR=93;SF=0,1,2,3,4,5,6,7,8,9,10,11,12,13,14,15,16,17,18,19,20,21,22,23,24,25,26,27,28,30,31,32,33,34,35,36;SRF=0;SRP=0;SRR=0;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	1/1:-653.398,-62.0122,0:206:0:206:7541:0:0,206	1/1:-275.486,-25.8886,0:86:0:86:3171:0	1/1:-758.028,-70.9493,0:241:1:240:8807:16	1/1:-702.156,-66.2266,0:220:0:220:8133:0:0,220	1/1:-755.527,-70.7421,0:235:0:235:8727:0	1/1:-874.578,-81.8802,0:273:0:272:10094:0:0,272	1/1:-605.583,-57.4967,0:191:0:191:6991:0:0,191	1/1:-1037.68,-98.1358,0:326:0:326:11964:0	1/1:-627.468,-58.7009,0:196:0:195:7249:0	1/1:-467.553,-43.9504,0:146:0:146:5421:0:0,146	1/1:-586.376,-55.0885,0:183:0:183:6758:0:0,183	1/1:-894.482,-85.1915,0:283:0:283:10321:0	1/1:-1073.26,-101.748,0:338:0:338:12395:0:0,338	1/1:-834.045,-74.2689,0:270:2:268:9699:77	1/1:-567.163,-53.8844,0:179:0:179:6539:0	1/1:-814.331,-78.5688,0:261:0:261:9437:0	1/1:-657.353,-61.4101,0:204:0:204:7595:0:0,204	1/1:-780.913,-72.5482,0:241:0:241:9032:0	1/1:-393.722,-37.6288,0:125:0:125:4537:0	1/1:-779.168,-72.8493,0:242:0:242:9000:0	1/1:-760.348,-70.1479,0:239:1:238:8792:18:1,238	1/1:-426.136,-38.0394,0:138:1:137:4941:36:1,137	1/1:-431.733,-39.2436,0:142:1:141:5007:36	1/1:-797.977,-73.6586,0:250:1:249:9261:16	1/1:-418.29,-39.1339,0:130:0:130:4823:0:0,130	0/1:-478.671,0,-498.217:380:194:186:6835:7098:194,186	0/1:-319.972,0,-314.426:257:129:127:4573:4527	1/1:-910.091,-86.3956,0:287:0:287:10511:0:0,287	0/1:-226.074,0,-156.11:147:63:84:3115:2309	.	1/1:-585.616,-55.6906,0:185:0:185:6757:0	1/1:-525.939,-50.8741,0:169:0:169:6058:0	1/1:-673.068,-63.8184,0:212:0:212:7759:0	1/1:-687.205,-64.4204,0:214:0:214:7943:0	1/1:-627.678,-59.0019,0:196:0:196:7240:0	1/1:-369.541,-35.2205,0:117:0:117:4274:0	1/1:-743.041,-70.441,0:234:0:234:8563:0
+chr1	237753074	.	ATTTTTTTTTTCTTCCCA	ATTTTTTTTTCTTCCCA	3254.17	.	AB=0.430052;ABP=11.2124;AC=32;AF=0.5;AN=50;AO=83;CIGAR=1M1D16M;DP=5016;DPB=188.778;DPRA=0;EPP=3.66436;EPPR=5.61177;GTI=0;LEN=1;MEANALT=7;MQM=41.5422;MQMR=42;NS=1;NUMALT=1;ODDS=446.358;PAIRED=1;PAIREDR=0.990099;PAO=1;PQA=28.5;PQR=28.5;PRO=1;QA=2985;QR=3710;RO=101;RPL=34;RPP=8.89682;RPPR=14.3837;RPR=49;RUN=1;SAF=50;SAP=10.5712;SAR=33;SF=0,2,6,7,8,9,11,12,14,15,16,17,18,19,21,22,23,25,27,28,30,32,33,34,36;SRF=59;SRP=9.22372;SRR=42;TYPE=del	GT:GL:DP:RO:AO:QA:QR:AD	0/1:-202.041,0,-266.092:193:101:83:2985:3710:101,83	.	0/1:.,.,-243.737:201:96:96:3303:3528	.	.	.	0/1:-192.416,0,-253.771:184:95:79:2832:3537:95,79	0/1:.,.,-253.918:243:107:129:4614:3939	1/1:.,.,0:164:2:160:5830:71	0/1:-142.83,0,-159.015:131:61:60:2065:2254:61,60	.	1/1:.,.,0:292:4:278:9584:142	1/1:-838.097,-83.9939,0:278:1:269:9703:38:1,269	.	1/1:.,.,0:149:3:142:5105:113	0/1:.,.,-313.511:228:123:94:3205:4492	0/1:-280.344,0,-290.802:227:111:111:4020:4138:111,111	0/1:.,.,-196.721:202:82:113:4141:3043	0/1:.,.,-118.553:144:51:89:3087:1879	1/1:.,.,0:177:2:169:5921:76	.	0/1:-146.597,0,-212.668:158:83:64:2233:3007:83,64	0/1:.,.,-218.517:167:85:77:2659:3125	1/1:.,.,0:217:1:214:7658:38	.	0/1:-309.178,0,-385.534:290:148:131:4564:5460:148,131	.	0/1:-289.857,0,-391.176:292:150:125:4326:5490:150,125	0/1:.,.,-169.757:166:71:90:3116:2602	.	0/1:.,.,-272.194:211:109:97:3487:3978	.	0/1:.,.,-196.1:162:79:79:2856:2871	1/1:.,.,0:164:0:162:5650:0	0/1:.,.,-232.231:203:93:105:3823:3428	.	0/1:.,.,-223.636:173:89:77:2783:3218
+chr1	237765311	.	TAA	TA	1244.86	.	AB=0.4375;ABP=7.35324;AC=1;AF=0.5;AN=2;AO=56;CIGAR=1M1D1M;DP=128;DPB=112;DPRA=0;EPP=3.16541;EPPR=6.02623;GTI=0;LEN=1;MEANALT=1;MQM=41.0357;MQMR=41.6806;NS=1;NUMALT=1;ODDS=286.64;PAIRED=1;PAIREDR=1;PAO=4;PQA=140;PQR=101;PRO=3;QA=1986;QR=2642;RO=72;RPL=33;RPP=6.88793;RPPR=4.9405;RPR=23;RUN=1;SAF=30;SAP=3.63072;SAR=26;SF=26;SRF=37;SRP=3.13094;SRR=35;TYPE=del	GT:GL:DP:RO:AO:QA:QR	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-131.452,0,-186.698:128:72:56:1986:2642	.	.	.	.	.	.	.	.	.	.
+chr1	237774051	.	C	T	3335.43	.	AB=0.590909;ABP=10.9066;AC=2;AF=0.5;AN=4;AO=65;CIGAR=1X;DP=460;DPB=110;DPRA=0;EPP=4.64726;EPPR=5.37479;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=42;NS=1;NUMALT=1;ODDS=239.466;PAIRED=0.969231;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2421;QR=1651;RO=45;RPL=25;RPP=10.5269;RPPR=3.44459;RPR=40;RUN=1;SAF=46;SAP=27.3642;SAR=19;SF=24,29;SRF=29;SRP=11.1654;SRR=16;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-176.554,0,-110.816:110:45:65:2421:1651:45,65	.	.	.	.	0/1:-520.123,0,-347.889:350:149:199:7301:5226	.	.	.	.	.	.	.
+chr1	237778084	.	G	A	1899.28	.	AB=0.507143;ABP=3.07234;AC=4;AF=0.5;AN=8;AO=71;CIGAR=1X;DP=646;DPB=140;DPRA=0;EPP=3.28556;EPPR=6.20364;GTI=0;LEN=1;MEANALT=2;MQM=42;MQMR=41.3971;NS=1;NUMALT=1;ODDS=381.79;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2587;QR=2510;RO=68;RPL=30;RPP=6.71098;RPPR=3.13803;RPR=41;RUN=1;SAF=19;SAP=36.3164;SAR=52;SF=3,18,19,29;SRF=20;SRP=28.0461;SRR=48;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	0/1:-182.67,0,-174.909:140:68:71:2587:2510:68,71	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-80.1527,0,-127.572:80:46:33:1197:1748	0/1:-233.483,0,-231.087:177:88:89:3307:3282	.	.	.	.	.	.	.	.	.	0/1:-305.258,0,-309.085:249:124:125:4409:4420	.	.	.	.	.	.	.
+chr1	237780626	.	G	A	4648.95	.	AB=0.568323;ABP=16.0661;AC=1;AF=0.5;AN=2;AO=183;CIGAR=1X;DP=322;DPB=322;DPRA=0;EPP=5.68014;EPPR=6.52527;GTI=0;LEN=1;MEANALT=1;MQM=41.7705;MQMR=42;NS=1;NUMALT=1;ODDS=766.488;PAIRED=1;PAIREDR=0.992806;PAO=0;PQA=0;PQR=0;PRO=0;QA=6671;QR=5098;RO=139;RPL=58;RPP=56.2766;RPPR=46.8928;RPR=125;RUN=1;SAF=111;SAP=21.0584;SAR=72;SF=34;SRF=76;SRP=5.65044;SRR=63;TYPE=snp	GT:GL:DP:RO:AO:QA:QR	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-480.739,0,-346.13:322:139:183:6671:5098	.	.
+chr1	237789101	.	T	C	2756.97	.	AB=0.459559;ABP=6.87424;AC=1;AF=0.5;AN=2;AO=125;CIGAR=1X;DP=272;DPB=272;DPRA=0;EPP=3.44459;EPPR=8.95954;GTI=0;LEN=1;MEANALT=2;MQM=41.68;MQMR=41.3356;NS=1;NUMALT=1;ODDS=634.815;PAIRED=0.992;PAIREDR=0.972603;PAO=0;PQA=0;PQR=0;PRO=0;QA=4382;QR=5245;RO=146;RPL=107;RPP=140.612;RPPR=118.188;RPR=18;RUN=1;SAF=53;SAP=9.28151;SAR=72;SF=7;SRF=60;SRP=13.0645;SRR=86;TYPE=snp	GT:GL:DP:RO:AO:QA:QR	.	.	.	.	.	.	.	0/1:-298.576,0,-368.293:272:146:125:4382:5245	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr1	237801770	.	T	C	5581.30	.	AB=0;ABP=0;AC=74;AF=1;AN=74;AO=163;CIGAR=1X;DP=6437;DPB=163;DPRA=0;EPP=5.2617;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=41.8773;MQMR=0;NS=1;NUMALT=1;ODDS=230.571;PAIRED=0.993865;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=6118;QR=0;RO=0;RPL=83;RPP=3.1302;RPPR=0;RPR=80;RUN=1;SAF=82;SAP=3.02362;SAR=81;SF=0,1,2,3,4,5,6,7,8,9,10,11,12,13,14,15,16,17,18,19,20,21,22,23,24,25,26,27,28,29,30,31,32,33,34,35,36;SRF=0;SRP=0;SRR=0;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	1/1:-527.328,-49.0679,0:163:0:163:6118:0:0,163	1/1:-227.321,-20.7711,0:69:0:69:2633:0	1/1:-479.033,-45.4555,0:151:0:151:5549:0	1/1:-493.133,-45.7566,0:152:0:152:5730:0:0,152	1/1:-520.566,-49.0679,0:164:0:163:6045:0	1/1:-737.429,-68.3338,0:227:0:227:8565:0:0,227	1/1:-512.021,-46.9607,0:156:0:156:5929:0:0,156	1/1:-722.67,-66.1328,0:225:1:224:8406:16	1/1:-385.823,-35.2205,0:117:0:117:4469:0	1/1:-415.487,-39.1339,0:130:0:130:4809:0:0,130	1/1:-535.465,-49.971,0:168:0:166:6216:0:0,166	1/1:-862.116,-81.2781,0:270:0:270:9977:0	1/1:-748.064,-68.9359,0:229:0:229:8714:0:0,229	1/1:-648.766,-60.206,0:200:0:200:7510:0	1/1:-379.638,-35.2205,0:117:0:117:4397:0	1/1:-622.349,-58.3998,0:194:0:194:7235:0	1/1:-581.637,-53.2823,0:177:0:177:6759:0:0,177	1/1:-644.203,-59.6039,0:199:0:198:7481:0	1/1:-433.895,-40.338,0:134:0:134:5021:0	1/1:-520.14,-47.8638,0:159:0:159:6033:0	1/1:-603.836,-55.6906,0:185:0:185:7013:0:0,185	1/1:-416.722,-39.1339,0:130:0:130:4843:0:0,130	1/1:-438.283,-40.9401,0:136:0:136:5069:0	1/1:-622.118,-56.5936,0:188:0:188:7228:0	1/1:-362.979,-33.4143,0:111:0:111:4205:0:0,111	1/1:-994.764,-92.4162,0:308:0:307:11538:0:0,307	1/1:-793.19,-73.4513,0:244:0:244:9175:0	1/1:-700.063,-65.3235,0:218:0:217:8131:0:0,217	1/1:-412.575,-38.8329,0:129:0:129:4788:0	1/1:-882.675,-83.3853,0:277:0:277:10235:0	1/1:-564.884,-52.9813,0:176:0:176:6546:0	1/1:-609.82,-56.8947,0:189:0:189:7058:0	1/1:-470.886,-43.9504,0:146:0:146:5463:0	1/1:-498.891,-46.0576,0:153:0:153:5782:0	1/1:-501.53,-46.6597,0:155:0:155:5852:0	1/1:-346.15,-32.2102,0:107:0:107:4007:0	1/1:-593.371,-55.3895,0:184:0:184:6887:0
+chr1	237802395	.	G	C	6631.82	.	AB=0.558696;ABP=16.7755;AC=1;AF=0.5;AN=2;AO=257;CIGAR=1X;DP=460;DPB=460;DPRA=0;EPP=55.7424;EPPR=55.6846;GTI=0;LEN=1;MEANALT=2;MQM=41.642;MQMR=41.9901;NS=1;NUMALT=1;ODDS=1160.69;PAIRED=0.996109;PAIREDR=0.99505;PAO=0;PQA=0;PQR=0;PRO=0;QA=9490;QR=7705;RO=202;RPL=98;RPP=34.4502;RPPR=71.8094;RPR=159;RUN=1;SAF=107;SAP=18.6331;SAR=150;SF=23;SRF=83;SRP=16.9421;SRR=119;TYPE=snp	GT:GL:DP:RO:AO:QA:QR	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-682.016,0,-526.473:460:202:257:9490:7705	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr1	237811766	.	C	T	1781.11	.	AB=0.47973;ABP=3.5385;AC=1;AF=0.5;AN=2;AO=71;CIGAR=1X;DP=148;DPB=148;DPRA=0;EPP=6.71098;EPPR=3.71532;GTI=0;LEN=1;MEANALT=1;MQM=41.7465;MQMR=41.974;NS=1;NUMALT=1;ODDS=410.116;PAIRED=0.971831;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2677;QR=2824;RO=77;RPL=24;RPP=19.1893;RPPR=6.42261;RPR=47;RUN=1;SAF=37;SAP=3.28556;SAR=34;SF=34;SRF=46;SRP=9.35551;SRR=31;TYPE=snp	GT:GL:DP:RO:AO:QA:QR	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-186.44,0,-200.029:148:77:71:2677:2824	.	.
+chr1	237814783	.	C	T	2187.74	.	AB=0.5;ABP=3.0103;AC=35;AF=0.5;AN=56;AO=69;CIGAR=1X;DP=3743;DPB=138;DPRA=0;EPP=12.1053;EPPR=3.79707;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=42;NS=1;NUMALT=1;ODDS=383.647;PAIRED=1;PAIREDR=0.971014;PAO=0;PQA=0;PQR=0;PRO=0;QA=2667;QR=2519;RO=69;RPL=29;RPP=6.81824;RPPR=37.2818;RPR=40;RUN=1;SAF=42;SAP=10.0912;SAR=27;SF=0,1,2,4,5,6,9,11,14,15,16,17,18,19,20,21,22,23,24,26,28,29,30,32,33,34,35,36;SRF=43;SRP=12.1053;SRR=26;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	0/1:-188.453,0,-177.341:138:69:69:2667:2519:69,69	0/1:-53.8582,0,-109.286:61:39:22:834:1471	0/1:-122.261,0,-215.029:130:80:50:1869:2944	.	0/1:-163.682,0,-169.558:126:65:61:2334:2410	0/1:-153.904,0,-235.468:148:88:60:2301:3235:88,60	0/1:-171.929,0,-170.903:129:64:64:2436:2422:64,64	.	.	0/1:-106.826,0,-164.874:106:62:44:1602:2264:62,44	.	0/1:-278.617,0,-349.635:241:132:109:4077:4868	.	.	1/1:-392.469,-35.8226,0:119:0:119:4549:0	0/1:-176.838,0,-185.132:138:70:68:2527:2632	0/1:-193.736,0,-149.787:129:58:71:2708:2193:58,71	1/1:-463.876,-43.0473,0:143:0:143:5407:0	0/1:-129.417,0,-95.9329:86:38:48:1818:1402	0/1:-168.704,0,-131.052:114:52:62:2350:1906	1/1:-511.929,-46.6597,0:155:0:155:5936:0:0,155	0/1:-141.717,0,-156.762:116:62:54:2044:2201:62,54	0/1:-165.258,0,-180.208:135:71:64:2380:2543	0/1:-193.182,0,-192.974:149:75:74:2764:2743	1/1:-195.075,-18.0618,0:60:0:60:2255:0:0,60	.	1/1:-604.525,-58.7009,0:195:0:195:7013:0	.	0/1:-232.795,0,-192.254:163:76:87:3260:2793	0/1:-200.553,0,-378.685:226:142:84:3124:5166	0/1:-141.21,0,-215.077:136:81:55:2108:2953	.	1/1:-419.748,-38.8329,0:129:0:129:4864:0	1/1:-375.037,-34.3174,0:114:0:114:4346:0	0/1:-157.292,0,-190.285:131:70:61:2276:2652	0/1:-45.7942,0,-120.077:63:43:20:746:1601	0/1:-200.498,0,-230.398:163:87:76:2891:3227
+chr1	237823256	.	A	C	1337.55	.	AB=0.505747;ABP=3.03526;AC=5;AF=0.5;AN=10;AO=44;CIGAR=1X;DP=554;DPB=87;DPRA=0;EPP=36.372;EPPR=7.10075;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=41.9535;NS=1;NUMALT=1;ODDS=236.023;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1604;QR=1615;RO=43;RPL=15;RPP=12.6832;RPPR=9.12072;RPR=29;RUN=1;SAF=22;SAP=3.0103;SAR=22;SF=6,13,19,20,24;SRF=23;SRP=3.46479;SRR=20;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	0/1:-112.776,0,-113.759:87:43:44:1604:1615:43,44	.	.	.	.	.	.	0/1:-198.704,0,-250.612:178:95:81:2914:3532	.	.	.	.	.	0/1:-137.944,0,-99.2015:90:39:51:1907:1459	0/1:-175.395,0,-164.485:128:62:65:2478:2345:62,65	.	.	.	0/1:-96.4991,0,-89.2977:71:34:37:1374:1276:34,37	.	.	.	.	.	.	.	.	.	.	.	.
+chr1	237829952	.	G	A	511.83	.	AB=0.436364;ABP=4.94488;AC=1;AF=0.5;AN=2;AO=24;CIGAR=1X;DP=55;DPB=55;DPRA=0;EPP=12.0581;EPPR=18.771;GTI=0;LEN=1;MEANALT=1;MQM=40.4167;MQMR=42;NS=1;NUMALT=1;ODDS=117.854;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=901;QR=1171;RO=31;RPL=19;RPP=20.744;RPPR=28.2974;RPR=5;RUN=1;SAF=12;SAP=3.0103;SAR=12;SF=18;SRF=17;SRP=3.64073;SRR=14;TYPE=snp	GT:GL:DP:RO:AO:QA:QR	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-59.4184,0,-85.0396:55:31:24:901:1171	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr1	237841390	.	A	G	3535.31	.	AB=0.461538;ABP=5.01474;AC=20;AF=0.5;AN=32;AO=72;CIGAR=1X;DP=3085;DPB=156;DPRA=0;EPP=30.1537;EPPR=16.8502;GTI=0;LEN=1;MEANALT=2;MQM=42;MQMR=42;NS=1;NUMALT=1;ODDS=411.291;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2718;QR=3189;RO=83;RPL=32;RPP=4.9405;RPPR=22.0826;RPR=40;RUN=1;SAF=33;SAP=4.09604;SAR=39;SF=0,2,3,5,8,9,10,12,13,15,25,27,28,32,34,35;SRF=40;SRP=3.24576;SRR=43;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	0/1:-188.125,0,-228.125:156:83:72:2718:3189:83,72	.	0/1:-250.308,0,-225.461:182:86:96:3529:3257	0/1:-285.874,0,-231.377:193:88:105:3996:3351:88,105	.	0/1:-288.57,0,-249.808:204:96:107:4052:3617:96,107	.	.	0/1:-245.512,0,-140.146:144:56:88:3342:2122	0/1:-157.696,0,-179.278:131:67:64:2337:2531:67,64	0/1:-229.636,0,-254.93:184:95:89:3299:3602:95,89	.	0/1:-332.99,0,-309.301:243:116:126:4715:4428:116,126	1/1:-892.998,-83.3853,0:277:0:277:10361:0	.	0/1:-253.016,0,-191.158:170:75:95:3523:2805	.	.	.	.	.	.	.	.	.	1/1:-1093.88,-102.651,0:341:0:341:12697:0:0,341	.	0/1:-312.119,0,-418.01:278:154:124:4600:5869:154,124	0/1:-207.046,0,-199.099:156:77:79:2948:2844	.	.	.	0/1:-223.853,0,-230.295:167:84:83:3175:3256	.	1/1:-560.244,-52.3792,0:174:0:174:6483:0	1/1:-271.368,-25.5876,0:85:0:85:3135:0	.
+chr1	237850716	.	C	T	657.42	.	AB=0.401709;ABP=12.8283;AC=1;AF=0.5;AN=2;AO=47;CIGAR=1X;DP=117;DPB=117;DPRA=0;EPP=23.3852;EPPR=27.3308;GTI=0;LEN=1;MEANALT=1;MQM=40.1702;MQMR=39.3429;NS=1;NUMALT=1;ODDS=151.377;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1279;QR=2087;RO=70;RPL=18;RPP=8.60069;RPPR=9.09042;RPR=29;RUN=1;SAF=29;SAP=8.60069;SAR=18;SF=13;SRF=45;SRP=15.4187;SRR=25;TYPE=snp	GT:GL:DP:RO:AO:QA:QR	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-75.8323,0,-144.746:117:70:47:1279:2087	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr1	237863718	.	T	G	8207.80	.	AB=0;ABP=0;AC=74;AF=1;AN=74;AO=281;CIGAR=1X;DP=10409;DPB=287;DPRA=0;EPP=3.01803;EPPR=7.35324;GTI=0;LEN=1;MEANALT=3;MQM=41.0214;MQMR=24;NS=1;NUMALT=1;ODDS=384.124;PAIRED=0.989324;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=9965;QR=32;RO=2;RPL=202;RPP=119.922;RPPR=7.35324;RPR=79;RUN=1;SAF=121;SAP=14.7641;SAR=160;SF=0,1,2,3,4,5,6,7,8,9,10,11,12,13,14,15,16,17,18,19,20,21,22,23,24,25,26,27,28,29,30,31,32,33,34,35,36;SRF=0;SRP=7.35324;SRR=2;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	1/1:-851.813,-82.4263,0:287:2:281:9965:32:2,281	1/1:-342.089,-32.801,0:116:1:114:3995:20	1/1:-703.301,-67.5245,0:243:3:236:8193:50	1/1:-763.114,-73.0868,0:254:2:250:8898:32:2,250	1/1:-962.692,-91.8391,0:324:2:318:11210:50	1/1:-1022.49,-90.9067,0:348:8:335:12008:146:8,335	1/1:-679.508,-66.6119,0:228:1:225:7915:16:1,225	1/1:-1058.97,-105.919,0:370:2:357:12368:45	1/1:-576.08,-56.3565,0:196:1:191:6762:16	1/1:-702.399,-68.0044,0:232:1:230:8127:17:1,230	1/1:-712.84,-65.9776,0:245:4:238:8335:77:4,238	1/1:-1175.74,-117.35,0:404:3:397:13706:48	1/1:-1263.32,-115.44,0:425:6:411:14722:113:6,411	1/1:-1216.73,-117.208,0:408:3:401:14142:49	1/1:-632.752,-57.7712,0:211:3:207:7370:61	1/1:-954.497,-92.2726,0:327:4:318:11254:66	1/1:-979.843,-87.5284,0:335:5:322:11508:155:5,322	1/1:-970.396,-94.5907,0:329:2:324:11355:44	1/1:-436.664,-42.3277,0:149:1:145:5045:18	1/1:-914.194,-87.3294,0:303:2:298:10691:33	1/1:-1151.36,-109.333,0:390:4:376:13451:64:4,376	1/1:-524.436,-52.1565,0:180:1:177:6036:16:1,177	1/1:-563.325,-53.4615,0:188:2:186:6527:33	1/1:-954.224,-86.2114,0:322:5:310:11135:96	1/1:-322.767,-32.8123,0:109:0:109:3748:0:0,109	1/1:-1595.55,-153.056,0:524:2:516:18475:32:2,516	1/1:-971.287,-97.8104,0:345:3:336:11277:48	1/1:-1226.68,-117.12,0:419:6:407:14335:95:6,407	1/1:-665.625,-65.0225,0:218:0:216:7678:0	1/1:-1334.71,-128.573,0:446:3:439:15502:51	1/1:-752.968,-73.1503,0:247:0:243:8756:0	1/1:-540.078,-53.558,0:188:1:182:6242:17	1/1:-640.35,-62.3815,0:215:1:211:7506:16	1/1:-643.447,-61.4936,0:222:3:213:7543:62	1/1:-688.305,-66.801,0:232:2:230:8000:32	1/1:-412.274,-40.6243,0:144:1:140:4859:20	1/1:-847.554,-82.4572,0:286:1:278:9870:17
+chr1	237872887	.	T	C	2328.07	.	AB=0.510638;ABP=3.19511;AC=3;AF=0.5;AN=6;AO=96;CIGAR=1X;DP=558;DPB=188;DPRA=0;EPP=6.26751;EPPR=6.40913;GTI=0;LEN=1;MEANALT=1;MQM=41.5625;MQMR=42;NS=1;NUMALT=1;ODDS=526.889;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3633;QR=3465;RO=92;RPL=61;RPP=18.3011;RPPR=71.8365;RPR=35;RUN=1;SAF=43;SAP=5.27225;SAR=53;SF=0,17,31;SRF=45;SRP=3.10471;SRR=47;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	0/1:-255.736,0,-242.923:188:92:96:3633:3465:92,96	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-284.287,0,-359.368:245:134:111:4138:5014	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-185.473,0,-138.354:125:55:70:2595:2055	.	.	.	.	.
+chr1	237875068	.	C	T	1182.71	.	AB=0.51087;ABP=3.10471;AC=1;AF=0.5;AN=2;AO=47;CIGAR=1X;DP=92;DPB=92;DPRA=0;EPP=6.75262;EPPR=4.21667;GTI=0;LEN=1;MEANALT=1;MQM=41.9149;MQMR=42;NS=1;NUMALT=1;ODDS=256.24;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1760;QR=1673;RO=45;RPL=28;RPP=6.75262;RPPR=6.91895;RPR=19;RUN=1;SAF=25;SAP=3.42611;SAR=22;SF=14;SRF=26;SRP=5.37479;SRR=19;TYPE=snp	GT:GL:DP:RO:AO:QA:QR	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-124.948,0,-117.891:92:45:47:1760:1673	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr1	237881770	.	C	T	3763.63	.	AB=0;ABP=0;AC=73;AF=1;AN=74;AO=114;CIGAR=1X;DP=4528;DPB=114;DPRA=0;EPP=3.08649;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=0;NS=1;NUMALT=1;ODDS=162.643;PAIRED=0.982456;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=4326;QR=0;RO=0;RPL=42;RPP=20.1535;RPPR=0;RPR=72;RUN=1;SAF=60;SAP=3.69603;SAR=54;SF=0,1,2,3,4,5,6,7,8,9,10,11,12,13,14,15,16,17,18,19,20,21,22,23,24,25,26,27,28,29,30,31,32,33,34,35,36;SRF=0;SRP=0;SRR=0;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	1/1:-373.72,-34.3174,0:114:0:114:4326:0:0,114	1/1:-154.119,-14.1484,0:47:0:47:1784:0	1/1:-334.504,-31.0061,0:104:0:103:3868:0	1/1:-367.64,-34.0164,0:113:0:113:4259:0:0,113	1/1:-404.734,-37.0267,0:123:0:123:4689:0	1/1:-451.329,-41.8432,0:140:0:139:5228:0:0,139	1/1:-362.96,-34.0164,0:113:0:113:4192:0:0,113	1/1:-450.866,-42.7463,0:142:0:142:5260:0	1/1:-335.596,-31.6082,0:105:0:105:3878:0	1/1:-235.232,-21.9752,0:73:0:73:2747:0:0,73	1/1:-337.54,-31.9092,0:106:0:106:3900:0:0,106	1/1:-583.333,-54.7875,0:182:0:182:6752:0	1/1:-496.232,-46.9607,0:156:0:156:5780:0:0,156	1/1:-673.099,-64.4204,0:214:0:214:7808:0	1/1:-287.007,-27.0927,0:90:0:90:3317:0	1/1:-467.809,-43.6494,0:145:0:145:5416:0	1/1:-297.05,-27.6948,0:92:0:92:3433:0:0,92	1/1:-367.557,-34.0164,0:113:0:113:4270:0	1/1:-282.528,-23.0681,0:89:1:88:3340:39	1/1:-365.154,-33.7154,0:113:0:112:4243:0	1/1:-461.298,-41.8432,0:139:0:139:5353:0:0,139	1/1:-285.924,-27.3937,0:91:0:91:3297:0:0,91	1/1:-365.083,-34.3174,0:114:0:114:4216:0	1/1:-407.31,-37.6288,0:125:0:125:4709:0	1/1:-273.171,-24.9855,0:83:0:83:3158:0:0,83	1/1:-720.212,-66.5276,0:221:0:221:8336:0:0,221	1/1:-619.24,-59.3029,0:198:0:197:7193:0	0/1:-224.838,0,-271.484:194:105:89:3270:3804:105,89	1/1:-273.862,-25.8886,0:86:0:86:3159:0	1/1:-576.479,-55.3895,0:184:0:184:6671:0	1/1:-396.184,-35.4278,0:123:1:122:4629:16	1/1:-370.23,-35.5215,0:118:0:118:4281:0	1/1:-378.164,-34.9195,0:116:0:116:4375:0	1/1:-250.968,-23.4803,0:78:0:78:2898:0	1/1:-358.943,-33.7154,0:112:0:112:4177:0	1/1:-228.901,-20.7711,0:70:0:69:2653:0	1/1:-317.953,-28.4809,0:102:1:101:3727:27
+chr1	237890437	.	C	T	2922.43	.	AB=0;ABP=0;AC=73;AF=1;AN=74;AO=92;CIGAR=1X;DP=3546;DPB=92;DPRA=0;EPP=48.7056;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=0;NS=1;NUMALT=1;ODDS=132.144;PAIRED=0.98913;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=3484;QR=0;RO=0;RPL=46;RPP=3.0103;RPPR=0;RPR=46;RUN=1;SAF=44;SAP=3.38795;SAR=48;SF=0,1,2,3,4,5,6,7,8,9,10,11,12,13,14,15,16,17,18,19,20,21,22,23,24,25,26,27,28,29,30,31,32,33,34,35,36;SRF=0;SRP=0;SRR=0;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	1/1:-301.469,-27.6948,0:92:0:92:3484:0:0,92	1/1:-122.716,-8.31762,0:40:1:39:1458:39	1/1:-286.496,-27.3937,0:91:0:91:3367:0	1/1:-349.176,-32.2102,0:107:0:107:4033:0:0,107	1/1:-223.107,-20.7711,0:69:0:69:2575:0	1/1:-374.647,-34.9195,0:116:0:116:4335:0:0,116	1/1:-233.331,-21.6742,0:72:0:72:2692:0:0,72	1/1:-405.887,-38.2308,0:127:0:127:4689:0	1/1:-277.681,-25.8886,0:86:0:86:3215:0	1/1:-243.359,-22.2762,0:74:0:74:2832:0:0,74	1/1:-303.51,-28.5979,0:96:0:95:3508:0:0,95	1/1:-444.161,-41.5421,0:138:0:138:5132:0	1/1:-445.879,-40.9401,0:136:0:136:5163:0:0,136	1/1:-407.226,-38.2308,0:127:0:127:4720:0	1/1:-210.778,-20.169,0:67:0:67:2432:0	1/1:-313.781,-29.1999,0:97:0:97:3627:0	1/1:-301.319,-27.9958,0:93:0:93:3484:0:0,93	1/1:-420.068,-38.8329,0:129:0:129:4873:0	1/1:-161.409,-15.0515,0:50:0:50:1863:0	1/1:-292.233,-27.9958,0:93:0:93:3375:0	1/1:-315.008,-29.802,0:99:0:99:3661:0:0,99	1/1:-205.248,-18.9649,0:64:0:63:2372:0:0,63	1/1:-265.831,-23.5685,0:85:1:83:3092:19	1/1:-295.433,-27.0927,0:90:0:90:3415:0	1/1:-191.33,-17.7608,0:59:0:59:2207:0:0,59	1/1:-464.125,-42.6531,0:147:1:146:5375:16:1,146	1/1:-419.356,-38.7412,0:135:1:134:4866:19	0/1:-192.015,0,-202.065:153:79:74:2745:2863:79,74	1/1:-257.552,-24.0824,0:82:0:80:2976:0	1/1:-579.448,-53.8844,0:180:0:179:6701:0	1/1:-263.423,-24.2371,0:85:1:84:3056:14	1/1:-213.595,-20.47,0:68:0:68:2472:0	1/1:-241.566,-22.5773,0:75:0:75:2832:0	1/1:-255.044,-23.7814,0:79:0:79:2948:0	1/1:-256.582,-24.3834,0:81:0:81:3009:0	1/1:-174.443,-16.2556,0:54:0:54:2014:0	1/1:-360.14,-33.1133,0:110:0:110:4165:0
+chr1	237893674	.	C	T	4858.74	.	AB=0;ABP=0;AC=74;AF=1;AN=74;AO=164;CIGAR=1X;DP=5926;DPB=164;DPRA=0;EPP=3.0103;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=41.9878;MQMR=0;NS=1;NUMALT=1;ODDS=231.957;PAIRED=0.993902;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=6162;QR=0;RO=0;RPL=136;RPP=157.45;RPPR=0;RPR=28;RUN=1;SAF=54;SAP=44.5331;SAR=110;SF=0,1,2,3,4,5,6,7,8,9,10,11,12,13,14,15,16,17,18,19,20,21,22,23,24,25,26,27,28,29,30,31,32,33,34,35,36;SRF=0;SRP=0;SRR=0;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	1/1:-533.503,-49.3689,0:164:0:164:6162:0:0,164	1/1:-262.712,-24.9855,0:84:0:83:3031:0	1/1:-453.785,-43.3483,0:144:0:144:5228:0	1/1:-339.299,-31.9092,0:108:0:106:3917:0:0,106	1/1:-463.76,-43.3483,0:145:0:144:5362:0	1/1:-588.598,-55.0885,0:183:0:183:6799:0:0,183	1/1:-398.051,-37.9298,0:126:0:126:4583:0:0,126	1/1:-435.363,-40.6391,0:136:0:135:5053:0	1/1:-306.865,-28.5979,0:96:0:95:3555:0	1/1:-315.148,-30.103,0:100:0:100:3632:0:0,100	1/1:-450.998,-43.0473,0:143:0:143:5217:0:0,143	1/1:-694.974,-65.6245,0:218:0:218:8037:0	1/1:-711.611,-66.5276,0:221:0:221:8230:0:0,221	1/1:-736.208,-69.2369,0:230:0:230:8500:0	1/1:-430.932,-40.338,0:134:0:134:4971:0	1/1:-536.199,-50.272,0:167:0:167:6208:0	1/1:-427.658,-39.736,0:132:0:132:4945:0:0,132	1/1:-574.086,-54.1854,0:181:0:180:6649:0	1/1:-350.305,-33.4143,0:111:0:111:4036:0	1/1:-519.868,-49.0679,0:163:0:163:6000:0	1/1:-637.657,-59.3029,0:197:0:197:7385:0:0,197	1/1:-338.414,-31.214,0:109:1:108:3933:16:1,108	1/1:-381.239,-36.1236,0:120:0:120:4396:0	1/1:-610.113,-57.4967,0:191:0:191:7048:0	1/1:-277.131,-26.1896,0:87:0:87:3204:0:0,87	1/1:-969.369,-92.1152,0:307:0:306:11221:0:0,306	1/1:-726.159,-68.9864,0:238:2:236:8476:28	1/1:-842.45,-79.773,0:266:0:265:9715:0:0,265	1/1:-420.638,-38.9387,0:134:1:133:4867:14	1/1:-814.831,-76.9699,0:261:1:260:9436:16	1/1:-412.311,-38.8329,0:130:0:129:4759:0	1/1:-512.959,-48.4658,0:161:0:161:5921:0	1/1:-550.041,-51.1751,0:170:0:170:6350:0	1/1:-411.34,-38.5318,0:128:0:128:4749:0	1/1:-522.448,-49.0679,0:163:0:163:6026:0	1/1:-282.637,-26.4906,0:88:0:88:3261:0	1/1:-604.977,-57.1957,0:190:0:190:7000:0
+chr1	237905568	.	TCCTTTTTTTTTTTTTTTAAATATACA	TCCCTTTTTTTTTTTTTTTAAATATACA,TCCCTTTTTTTTTTTTTTAAATATACA,TCCTTTTTTTTTTTTTTAAATATACA,TCCTTTTTTTTTTTTTTTTAAATATACA	460.34	.	AB=0.232143;ABP=37.909;AC=15,1,1,1;AF=0.5;AN=32;AO=13;CIGAR=1M1I4M;DP=1154;DPB=59;DPRA=0;EPP=4.51363;EPPR=3.12459;GTI=0;LEN=1;MEANALT=15;MQM=38.8462;MQMR=41.5789;NS=1;NUMALT=1;ODDS=36.1098;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=360;QR=613;RO=19;RPL=6;RPP=3.17734;RPPR=3.12459;RPR=7;RUN=1;SAF=10;SAP=11.1951;SAR=3;SF=0,6,8,9,10,13,15,20,23,24,25,26,27,32,34,35;SRF=12;SRP=5.8675;SRR=7;TYPE=ins	GT:GL:DP:RO:AO:QA:QR:AD	0/1:.,.,-44.0123,.,.,.,.,.,.,.,.,.,.,.,.:56:19:13,.,.,.:360,.,.,.:613:19,13	.	.	.	.	.	0/1:-19.5114,0,-21.6141,.,.,.,.,.,.,.,.,.,.,.,.:52:10:11,.,.,.:352,.,.,.:342:10,11	.	0/1:.,.,-13.4816,.,.,.,.,.,.,.,.,.,.,.,.:36:10:21,.,.,.:652,.,.,.:262	1/4:-31.8468,-8.27494,-7.54943,.,.,.,.,.,.,.,-21.2928,0,.,.,-22.3713:41:3:13,.,.,7:379,.,.,212:97:3,13,7	0/1:-36.2463,0,-9.45777,.,.,.,.,.,.,.,.,.,.,.,.:63:8:19,.,.,.:589,.,.,.:278:8,19	.	.	0/1:.,.,-64.3914,.,.,.,.,.,.,.,.,.,.,.,.:77:32:34,.,.,.:1009,.,.,.:1023	.	0/1:.,.,-88.5956,.,.,.,.,.,.,.,.,.,.,.,.:87:41:28,.,.,.:885,.,.,.:1292	.	.	.	.	0/3:-20.6523,.,.,.,.,.,0,.,.,-68.5702,.,.,.,.,.:77:28:.,.,14,.:.,.,448,.:998:28,14	.	.	0/1:.,.,-38.6459,.,.,.,.,.,.,.,.,.,.,.,.:40:19:18,.,.,.:559,.,.,.:569	0/1:-14.805,0,-44.6495,.,.,.,.,.,.,.,.,.,.,.,.:47:18:9,.,.,.:288,.,.,.:635:18,9	1/2:-212.528,-67.9566,-47.0452,-146.849,0,-137.376,.,.,.,.,.,.,.,.,.:145:4:66,28,.,.:2049,1008,.,.:139:4,66,28	0/1:.,.,-138.289,.,.,.,.,.,.,.,.,.,.,.,.:118:64:35,.,.,.:1023,.,.,.:2014	0/1:-67.5955,0,-105.045,.,.,.,.,.,.,.,.,.,.,.,.:169:46:37,.,.,.:1143,.,.,.:1602:46,37	.	.	.	.	0/1:.,.,-21.8982,.,.,.,.,.,.,.,.,.,.,.,.:56:13:32,.,.,.:1003,.,.,.:422	.	0/1:.,.,-35.0066,.,.,.,.,.,.,.,.,.,.,.,.:46:18:21,.,.,.:617,.,.,.:549	0/1:.,.,-19.683,.,.,.,.,.,.,.,.,.,.,.,.:44:12:27,.,.,.:788,.,.,.:360	.
+chr1	237905570	.	CTTTTTTTTTTTTTTTAAATATACA	CTTTTTTTTTTTTTTTTAAATATACA,CTTTTTTTTTTTTTTAAATATACA	182.14	.	AB=0.348485;ABP=16.1707;AC=7,5;AF=0.5;AN=24;AO=23;CIGAR=1M1I16M;DP=905;DPB=73.7059;DPRA=0;EPP=7.63648;EPPR=3.17734;GTI=0;LEN=1;MEANALT=9;MQM=37.913;MQMR=36.0769;NS=1;NUMALT=1;ODDS=32.123;PAIRED=1;PAIREDR=0.846154;PAO=5;PQA=174;PQR=174;PRO=5;QA=739;QR=467;RO=13;RPL=11;RPP=3.10471;RPPR=4.51363;RPR=12;RUN=1;SAF=18;SAP=18.9659;SAR=5;SF=2,3,4,12,16,17,19,21,22,30,33,36;SRF=9;SRP=7.18621;SRR=4;TYPE=ins	GT:GL:DP:RO:AO:QA:QR:AD	.	.	0/1:.,.,-19.9659,.,.,.:66:13:23,.:739,.:467	0/2:-15.6767,.,.,0,.,-123.422:86:46:.,13:.,404:1653:46,13	0/1:.,.,-80.6315,.,.,.:73:32:17,.:500,.:1169	.	.	.	.	.	.	.	0/2:-16.2124,.,.,0,.,-144.97:106:55:.,12:.,434:1947:55,12	.	.	.	0/1:-18.5197,0,-126.018,.,.,.:89:48:14,.:440,.:1690:48,14	0/2:.,.,.,.,.,-96.543:66:37:.,14:.,386:1348	.	0/1:.,.,-82.9237,.,.,.:72:34:20,.:595,.:1244	.	0/2:-23.3724,.,.,0,.,-50.2675:60:21:.,12:.,391:709:21,12	0/2:.,.,.,.,.,-85.391:80:39:.,18:.,553:1349	.	.	.	.	.	.	.	0/1:.,.,-67.0256,.,.,.:64:27:15,.:517,.:944	.	.	0/1:.,.,-52.8843,.,.,.:53:23:13,.:413,.:834	.	.	0/1:.,.,-67.6362,.,.,.:90:27:26,.:738,.:981
+chr1	237905571	.	T	C	289.54	.	AB=0.34;ABP=14.1282;AC=1;AF=0.5;AN=2;AO=17;CIGAR=1X;DP=50;DPB=50;DPRA=0;EPP=3.13803;EPPR=3.60252;GTI=0;LEN=1;MEANALT=1;MQM=40.8824;MQMR=37.3636;NS=1;NUMALT=1;ODDS=66.6697;PAIRED=0.941176;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=589;QR=1059;RO=33;RPL=8;RPP=3.13803;RPPR=22.0271;RPR=9;RUN=1;SAF=10;SAP=4.1599;SAR=7;SF=34;SRF=21;SRP=8.34028;SRR=12;TYPE=snp	GT:GL:DP:RO:AO:QA:QR	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-35.3045,0,-70.4817:50:33:17:589:1059	.	.
+chr1	237923053	.	C	T	4009.68	.	AB=0.592814;ABP=15.506;AC=56;AF=0.5;AN=68;AO=99;CIGAR=1X;DP=5458;DPB=167;DPRA=0;EPP=90.0666;EPPR=31.7504;GTI=0;LEN=1;MEANALT=1;MQM=41.798;MQMR=42;NS=1;NUMALT=1;ODDS=352.176;PAIRED=0.959596;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3671;QR=2479;RO=68;RPL=43;RPP=6.71716;RPPR=21.4039;RPR=56;RUN=1;SAF=51;SAP=3.20771;SAR=48;SF=0,1,2,3,4,5,6,7,8,9,10,11,12,13,14,15,16,17,18,19,20,21,22,23,24,26,28,29,30,31,32,33,34,36;SRF=29;SRP=6.20364;SRR=39;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	0/1:-267.293,0,-165.551:167:68:99:3671:2479:68,99	1/1:-265.229,-24.6845,0:82:0:82:3062:0	1/1:-513.851,-45.4872,0:163:1:162:5978:37	1/1:-442.044,-40.9401,0:136:0:136:5122:0:0,136	1/1:-527.513,-48.7669,0:162:0:162:6104:0	1/1:-650.065,-59.905,0:199:0:199:7523:0:0,199	0/1:-138.334,0,-131.618:107:53:54:1967:1876:53,54	1/1:-595.193,-55.6906,0:185:0:185:6896:0	0/1:-210.308,0,-171.263:148:69:79:2943:2492	1/1:-360.384,-33.7154,0:113:0:112:4167:0:0,112	0/1:-195.066,0,-164.402:139:65:74:2730:2368:65,74	1/1:-925.038,-87.9008,0:292:0:292:10696:0	1/1:-581.352,-54.8546,0:187:1:186:6751:15:1,186	0/1:-305.403,0,-277.487:232:115:117:4363:3980	1/1:-438.462,-41.2411,0:137:0:137:5069:0	0/1:-211.472,0,-231.347:173:89:84:3041:3267	1/1:-571.814,-53.8844,0:180:0:179:6630:0:0,179	1/1:-670.656,-63.5173,0:211:0:211:7783:0	1/1:-353.138,-33.4143,0:111:0:111:4076:0	1/1:-411.304,-39.4349,0:131:0:131:4766:0	1/1:-591.465,-56.2926,0:187:0:187:6844:0:0,187	0/1:-281.754,0,-20.7522:117:18:99:3672:638:18,99	1/1:-409.975,-38.5318,0:129:0:128:4735:0	0/1:-217.481,0,-287.713:195:110:85:3193:3975	0/1:-99.2846,0,-90.9411:74:36:38:1403:1312:36,38	.	0/1:-323.269,0,-249.07:236:106:128:4556:3677	.	1/1:-419.388,-39.736,0:132:0:132:4851:0	1/1:-859.333,-82.7833,0:275:0:275:9970:0	1/1:-432.727,-40.037,0:133:0:133:5000:0	1/1:-444.564,-41.5421,0:138:0:138:5150:0	0/1:-244.331,0,-163.835:161:68:93:3381:2435	1/1:-338.473,-31.9092,0:106:0:106:3910:0	0/1:-198.79,0,-158.265:138:64:74:2779:2294	.	1/1:-579.43,-54.7875,0:182:0:182:6693:0
+chr1	237923081	.	G	A	953.43	.	AB=0.487179;ABP=3.12166;AC=1;AF=0.5;AN=2;AO=38;CIGAR=1X;DP=78;DPB=78;DPRA=0;EPP=17.6392;EPPR=6.48466;GTI=0;LEN=1;MEANALT=1;MQM=41.8947;MQMR=41.1;NS=1;NUMALT=1;ODDS=219.535;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1444;QR=1510;RO=40;RPL=19;RPP=3.0103;RPPR=3.22745;RPR=19;RUN=1;SAF=18;SAP=3.23888;SAR=20;SF=24;SRF=21;SRP=3.22745;SRR=19;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-101.608,0,-105.678:78:40:38:1444:1510:40,38	.	.	.	.	.	.	.	.	.	.	.	.
+chr1	237924352	.	G	A	1609.08	.	AB=0.439189;ABP=7.76406;AC=1;AF=0.5;AN=2;AO=65;CIGAR=1X;DP=148;DPB=148;DPRA=0;EPP=17.7429;EPPR=12.4549;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=42;NS=1;NUMALT=1;ODDS=370.505;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2472;QR=2989;RO=83;RPL=35;RPP=3.84548;RPPR=4.29225;RPR=30;RUN=1;SAF=27;SAP=7.05258;SAR=38;SF=31;SRF=41;SRP=3.03646;SRR=42;TYPE=snp	GT:GL:DP:RO:AO:QA:QR	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-169.543,0,-215.05:148:83:65:2472:2989	.	.	.	.	.
+chr1	237941945	.	G	A	1327.90	.	AB=0.506024;ABP=3.03646;AC=3;AF=0.5;AN=6;AO=42;CIGAR=1X;DP=343;DPB=83;DPRA=0;EPP=13.1438;EPPR=7.30028;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=41.9512;NS=1;NUMALT=1;ODDS=237.926;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1575;QR=1551;RO=41;RPL=28;RPP=13.1438;RPPR=3.06326;RPR=14;RUN=1;SAF=20;SAP=3.21711;SAR=22;SF=0,17,31;SRF=20;SRP=3.06326;SRR=21;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	0/1:-111.266,0,-109.545:83:41:42:1575:1551:41,42	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-193.671,0,-198.808:149:75:74:2765:2810	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-120.582,0,-157.841:111:62:49:1778:2218	.	.	.	.	.
+chr1	237942082	.	AACTGCCTT	ACCTT	733.01	.	AB=0.581081;ABP=7.23587;AC=3;AF=0.5;AN=6;AO=43;CIGAR=1M4D4M;DP=227;DPB=54.8889;DPRA=0;EPP=11.5447;EPPR=12.7417;GTI=0;LEN=4;MEANALT=2;MQM=40.7907;MQMR=42;NS=1;NUMALT=1;ODDS=122.813;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1450;QR=999;RO=27;RPL=34;RPP=34.5724;RPPR=45.5551;RPR=9;RUN=1;SAF=25;SAP=5.48477;SAR=18;SF=0,17,31;SRF=17;SRP=6.95112;SRR=10;TYPE=del	GT:GL:DP:RO:AO:QA:QR:AD	0/1:-105.007,0,-65.7142:74:27:43:1450:999:27,43	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:.,.,-125.604:87:44:36:1231:1648	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:.,.,-95.338:66:36:28:945:1315	.	.	.	.	.
+chr1	237946964	.	T	C	2526.00	.	AB=0;ABP=0;AC=19;AF=1;AN=32;AO=148;CIGAR=1X;DP=2423;DPB=149;DPRA=0;EPP=3.24505;EPPR=5.18177;GTI=0;LEN=1;MEANALT=1;MQM=41.8784;MQMR=42;NS=1;NUMALT=1;ODDS=199.665;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=5499;QR=39;RO=1;RPL=58;RPP=18.0345;RPPR=5.18177;RPR=90;RUN=1;SAF=100;SAP=42.6837;SAR=48;SF=3,4,5,7,11,12,14,16,19,21,22,24,26,30,31,34;SRF=1;SRP=5.18177;SRR=0;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	1/1:-471.72,-41.1299,0:149:1:148:5499:39:1,148	0/1:-164.198,0,-208.357:140:77:63:2382:2901	0/1:-269.047,0,-257.874:202:98:104:3804:3683:98,104	.	1/1:-568.578,-54.1854,0:180:0:180:6594:0	.	.	.	1/1:-736.685,-71.6451,0:239:0:238:8495:0	0/1:-239.511,0,-247.568:188:95:92:3455:3513:95,92	.	0/1:-242.389,0,-138.57:144:56:88:3304:2104	.	0/1:-209.47,0,-147.458:138:60:77:2901:2178:60,77	.	.	0/1:-153.59,0,-167.592:121:63:58:2198:2369	.	0/1:-71.5874,0,-244.68:126:88:37:1257:3294:88,37	0/1:-206.435,0,-169.859:147:65:82:2886:2475	.	0/1:-117.653,0,-75.617:74:30:44:1615:1126:30,44	.	0/1:-268.391,0,-266.491:217:107:109:3852:3824	.	.	.	0/1:-215.518,0,-149.44:138:58:80:2970:2207	0/1:-155.11,0,-135.054:113:53:60:2177:1964	.	.	0/1:-122.884,0,-152.541:107:57:50:1793:2131	.	.
+chr1	237947000	.	C	T	2343.01	.	AB=0.459459;ABP=5.12308;AC=3;AF=0.5;AN=6;AO=68;CIGAR=1X;DP=546;DPB=148;DPRA=0;EPP=3.13803;EPPR=8.33041;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=41.75;NS=1;NUMALT=1;ODDS=373.857;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2490;QR=2779;RO=80;RPL=33;RPP=3.13803;RPPR=3.44459;RPR=35;RUN=1;SAF=48;SAP=28.0461;SAR=20;SF=0,17,31;SRF=59;SRP=42.2054;SRR=21;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	0/1:-171.371,0,-196.805:148:80:68:2490:2779:80,68	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-375.751,0,-258.994:246:102:144:5314:3855	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-188.927,0,-187.242:152:73:78:2697:2692	.	.	.	.	.
+chr1	237948286	.	A	G	3452.94	.	AB=0.498599;ABP=3.01638;AC=2;AF=0.5;AN=4;AO=178;CIGAR=1X;DP=559;DPB=357;DPRA=0;EPP=13.9897;EPPR=4.47817;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=41.9777;NS=1;NUMALT=1;ODDS=1045.76;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=6602;QR=6781;RO=179;RPL=88;RPP=3.0591;RPPR=10.5923;RPR=90;RUN=1;SAF=92;SAP=3.44947;SAR=86;SF=17,31;SRF=89;SRP=3.02243;SRR=90;TYPE=snp	GT:GL:DP:RO:AO:QA:QR	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-462.362,0,-478.032:357:179:178:6602:6781	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-243.709,0,-284.24:202:105:96:3533:4016	.	.	.	.	.
+chr1	237951451	.	A	G	3292.15	.	AB=0;ABP=0;AC=31;AF=1;AN=48;AO=126;CIGAR=1X;DP=4327;DPB=128;DPRA=0;EPP=14.6604;EPPR=5.18177;GTI=0;LEN=1;MEANALT=2;MQM=41.5635;MQMR=42;NS=1;NUMALT=1;ODDS=174.368;PAIRED=0.992063;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=4720;QR=17;RO=1;RPL=105;RPP=124.613;RPPR=5.18177;RPR=21;RUN=1;SAF=55;SAP=7.42218;SAR=71;SF=3,4,5,7,8,10,11,12,13,14,15,16,19,20,21,22,23,24,25,26,29,31,34,35;SRF=1;SRP=5.18177;SRR=0;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	1/1:-403.02,-36.697,0:128:1:126:4720:17:1,126	0/1:-249.117,0,-249.493:186:92:94:3531:3541	0/1:-232.081,0,-199.514:165:77:88:3286:2882:77,88	.	1/1:-662.001,-57.2277,0:207:2:205:7753:55	0/1:-235.28,0,-170.531:153:67:86:3259:2513	.	0/1:-201.088,0,-178.053:142:66:75:2864:2561:66,75	1/1:-848.352,-78.8699,0:262:0:262:9849:0	0/1:-354.077,0,-248.411:228:97:131:4910:3686:97,131	0/1:-317.251,0,-292.168:232:112:120:4480:4218	0/1:-221.185,0,-194.173:157:73:84:3131:2794	0/1:-190.235,0,-285.035:181:103:76:2845:3935	0/1:-228.566,0,-307.774:200:112:88:3353:4266:112,88	.	.	0/1:-177.997,0,-212.74:149:79:69:2590:2984	0/1:-269.705,0,-199.276:176:77:99:3777:2921:77,99	0/1:-189.942,0,-153.949:132:60:72:2653:2251:60,72	0/1:-165.642,0,-151.917:121:58:63:2333:2177	0/1:-244.394,0,-248.042:184:92:92:3469:3517	1/1:-235.134,-19.6298,0:76:1:75:2794:33:1,75	1/1:-1024.38,-94.8011,0:321:1:319:11950:17:1,319	1/1:-807.862,-76.1606,0:254:0:253:9369:0	.	.	0/1:-291.394,0,-328.858:237:125:112:4206:4639	.	0/1:-223.066,0,-208.601:162:79:83:3145:2976	.	.	0/1:-226.443,0,-229.392:170:85:85:3210:3251	1/1:-342.59,-31.3071,0:104:0:104:3963:0	.
+chr1	237957146	.	G	A	2168.28	.	AB=0;ABP=0;AC=42;AF=1;AN=58;AO=88;CIGAR=1X;DP=3169;DPB=90;DPRA=0;EPP=55.2243;EPPR=7.35324;GTI=0;LEN=1;MEANALT=1;MQM=41.3523;MQMR=42;NS=1;NUMALT=1;ODDS=108.042;PAIRED=1;PAIREDR=0.5;PAO=0;PQA=0;PQR=0;PRO=0;QA=3306;QR=75;RO=2;RPL=19;RPP=64.6999;RPPR=3.0103;RPR=69;RUN=1;SAF=40;SAP=4.58955;SAR=48;SF=2,3,4,5,6,7,8,9,10,11,12,13,14,16,17,19,20,21,23,24,25,26,27,30,31,32,33,34,35;SRF=1;SRP=3.0103;SRR=1;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	1/1:-276.746,-20.2277,0:90:2:88:3306:75	1/1:-294.977,-27.6948,0:92:0:92:3412:0:0,92	1/1:-316.541,-29.1999,0:97:0:97:3683:0	0/1:-183.761,0,-169.357:133:65:68:2593:2415:65,68	0/1:-75.1528,0,-134.477:80:50:30:1145:1827:50,30	0/1:-138.369,0,-181.394:122:68:54:2028:2515	1/1:-233.772,-21.3731,0:71:0:71:2705:0	0/1:-130.266,0,-93.5164:84:36:48:1797:1370:36,48	0/1:-145.969,0,-95.43:91:38:53:2004:1411:38,53	1/1:-600.442,-56.2926,0:187:0:187:6990:0	0/1:-191.989,0,-206.467:152:79:73:2789:2906:79,73	0/1:-208.356,0,-140.287:138:58:80:2886:2093	0/1:-97.6471,0,-100.925:76:39:37:1391:1424	.	0/1:-127.283,0,-127.653:96:49:47:1809:1806:49,47	0/1:-126.823,0,-129.11:96:49:47:1805:1821	.	1/1:-329.357,-31.0061,0:105:0:103:3841:0	0/1:-181.045,0,-123.467:113:48:65:2491:1826:48,65	0/1:-44.7813,0,-167.239:81:60:21:796:2205:60,21	.	1/1:-363.89,-33.1133,0:110:0:110:4225:0	0/1:-86.4812,0,-83.9534:64:32:32:1221:1187:32,32	0/1:-270.358,0,-357.527:240:132:107:3986:4958:132,107	1/1:-388.784,-35.9694,0:122:1:121:4500:17	0/1:-242.455,0,-232.155:182:89:93:3448:3322:89,93	.	.	1/1:-299.342,-27.3937,0:91:0:91:3465:0	1/1:-405.204,-36.983,0:129:1:126:4703:14	1/1:-316.797,-29.5009,0:98:0:98:3668:0	1/1:-239.442,-21.9752,0:73:0:73:2786:0	1/1:-280.95,-26.1896,0:87:0:87:3250:0	0/1:-80.7758,0,-101.007:69:37:32:1171:1403	.
+chr1	237957161	.	A	G	2784.27	.	AB=0;ABP=0;AC=43;AF=1;AN=58;AO=116;CIGAR=1X;DP=3928;DPB=118;DPRA=0;EPP=24.6501;EPPR=5.18177;GTI=0;LEN=1;MEANALT=2;MQM=41.4914;MQMR=42;NS=1;NUMALT=1;ODDS=160.587;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=4266;QR=17;RO=1;RPL=24;RPP=89.5697;RPPR=5.18177;RPR=92;RUN=1;SAF=55;SAP=3.68421;SAR=61;SF=2,3,4,5,6,7,8,9,10,11,12,13,14,16,17,19,20,21,23,24,25,26,27,30,31,32,33,34,35;SRF=1;SRP=5.18177;SRR=0;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	1/1:-365.376,-33.6867,0:118:1:116:4266:17	1/1:-363.789,-34.3174,0:114:0:114:4204:0:0,114	1/1:-404.638,-37.9298,0:126:0:126:4691:0	0/1:-232.044,0,-179.699:156:70:86:3229:2619:70,86	0/1:-93.4111,0,-165.371:98:60:38:1417:2253:60,38	0/1:-196.577,0,-193.357:150:73:77:2789:2760	1/1:-281.316,-26.4906,0:88:0:88:3250:0	0/1:-173.427,0,-94.3443:102:38:64:2372:1447:38,64	0/1:-155.987,0,-142.962:114:54:60:2198:2052:54,60	1/1:-690.884,-65.9256,0:219:0:219:8015:0	0/1:-246.817,0,-258.636:192:97:95:3541:3661:97,95	0/1:-306.01,0,-184.346:193:76:116:4199:2797	1/1:-322.838,-30.103,0:100:0:100:3730:0	.	0/1:-153.904,0,-160.342:118:60:58:2205:2264:60,58	0/1:-143.057,0,-151.705:113:59:54:2048:2144	.	1/1:-426.853,-40.6391,0:136:0:135:4962:0	0/1:-222.915,0,-140.463:142:57:84:3067:2131:57,84	0/1:-58.0622,0,-210.052:102:75:27:1023:2779:75,27	.	1/1:-433.679,-39.736,0:132:0:132:5038:0	0/1:-100.178,0,-115.466:80:42:38:1434:1615:42,38	0/1:-361.131,0,-423:300:159:141:5274:5939:159,141	1/1:-512.963,-49.3689,0:165:0:164:5927:0	0/1:-275.776,0,-230.214:194:89:105:3877:3339:89,105	.	.	1/1:-365.817,-34.0164,0:113:0:113:4232:0	1/1:-447.291,-39.3784,0:141:1:140:5210:31	1/1:-405.658,-37.9298,0:126:0:126:4687:0	1/1:-303.187,-25.6504,0:96:1:95:3551:33	1/1:-371.679,-35.2205,0:117:0:117:4290:0	0/1:-102.1,0,-117.314:83:43:40:1466:1645	.
+chr1	237957309	.	A	C	1821.30	.	AB=0;ABP=0;AC=41;AF=1;AN=56;AO=77;CIGAR=1X;DP=2452;DPB=78;DPRA=0;EPP=70.7208;EPPR=5.18177;GTI=0;LEN=1;MEANALT=1;MQM=41.974;MQMR=40;NS=1;NUMALT=1;ODDS=107.238;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2880;QR=14;RO=1;RPL=48;RPP=13.1908;RPPR=5.18177;RPR=29;RUN=1;SAF=36;SAP=3.71532;SAR=41;SF=2,3,4,5,6,7,8,9,10,11,12,13,14,16,19,20,21,23,24,25,26,27,30,31,32,33,34,35;SRF=1;SRP=5.18177;SRR=0;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	1/1:-248.08,-22.0814,0:78:1:77:2880:14	1/1:-282.704,-26.4906,0:88:0:88:3263:0:0,88	1/1:-266.636,-24.6845,0:82:0:82:3083:0	0/1:-138.74,0,-82.2139:84:33:51:1893:1242:33,51	0/1:-69.1111,0,-117.227:71:43:28:1040:1613:43,28	0/1:-124.293,0,-90.7433:83:37:46:1722:1335	1/1:-245.961,-23.1793,0:77:0:77:2846:0	0/1:-86.9032,0,-61.4137:59:25:34:1246:912:25,34	0/1:-135.781,0,-118.49:95:45:50:1899:1725:45,50	1/1:-398.64,-37.0267,0:123:0:123:4605:0	0/1:-157.915,0,-131.361:108:50:58:2199:1897:50,58	0/1:-195.818,0,-155.695:135:60:75:2725:2271	1/1:-186.32,-17.1587,0:57:0:57:2153:0	.	0/1:-94.7061,0,-67.8694:64:26:37:1323:1006:26,37	.	.	1/1:-265.832,-24.9855,0:83:0:83:3081:0	0/1:-115.862,0,-120.695:93:47:46:1659:1743:47,46	0/1:-20.6524,0,-140.182:62:50:12:450:1829:50,12	.	1/1:-276.176,-19.7169,0:89:2:87:3273:78	0/1:-71.9092,0,-43.6891:43:17:26:976:652:17,26	0/1:-225.879,0,-211.537:165:80:85:3180:3027:80,85	1/1:-402.408,-39.736,0:132:0:132:4634:0	0/1:-158.634,0,-144.047:118:57:61:2259:2082:57,61	.	.	1/1:-267.501,-24.9855,0:83:0:83:3086:0	0/1:-130.446,0,-120.969:95:45:50:1857:1731	1/1:-270.152,-24.9855,0:83:0:83:3120:0	1/1:-197.123,-18.3628,0:61:0:61:2288:0	1/1:-284.538,-26.7917,0:89:0:89:3312:0	0/1:-88.5969,0,-50.5191:52:20:32:1200:762	.
+chr1	237965131	.	GCATTTTTTTTTTTTGTCATTG	ACATTTTTTTTTTTTTGTCATTG,ACATTTTTTTTTTTTTTTGTCATTG,ACATTTTTTTTTTTTTTGTCATTG	1490.69	.	AB=0;ABP=0;AC=18,3,1;AF=1;AN=36;AO=110;CIGAR=1X2M1I19M;DP=2701;DPB=158.182;DPRA=0;EPP=3.08926;EPPR=0;GTI=0;LEN=23;MEANALT=16;MQM=40.2909;MQMR=0;NS=1;NUMALT=1;ODDS=40.6059;PAIRED=0.981818;PAIREDR=0;PAO=4.5;PQA=172.5;PQR=0;PRO=0;QA=3828;QR=0;RO=0;RPL=25;RPP=74.0767;RPPR=0;RPR=85;RUN=1;SAF=61;SAP=5.85295;SAR=49;SF=3,5,6,8,11,12,14,16,19,21,23,24,26,27,31,32,33,34;SRF=0;SRP=0;SRR=0;TYPE=complex	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	1/1:-330.08,-38.5318,0,.,.,.,.,.,.,.:151:0:110,.,.:3828,.,.:0:0,110	.	0/1:-153.599,0,-186.882,.,.,.,.,.,.,.:185:73:63,.,.:2164,.,.:2631:73,63	0/1:-107.393,0,-119.212,.,.,.,.,.,.,.:107:47:40,.,.:1403,.,.:1675:47,40	.	0/1:.,.,-205.732,.,.,.,.,.,.,.:130:73:37,.,.:1150,.,.:2662	.	.	1/1:.,.,0,.,.,.,.,.,.,.:201:0:134,.,.:4263,.,.:0	0/1:-166.375,0,-156.482,.,.,.,.,.,.,.:185:66:71,.,.:2474,.,.:2328:66,71	.	1/1:.,.,0,.,.,.,.,.,.,.:149:1:107,.,.:3546,.,.:31	.	0/1:-177.583,0,-115.782,.,.,.,.,.,.,.:159:48:65,.,.:2183,.,.:1745:48,65	.	.	0/1:.,.,-154.752,.,.,.,.,.,.,.:160:57:52,.,.:1722,.,.:2054	.	0/3:-22.5087,.,.,.,.,.,0,.,.,-161.768:107:60:.,.,13:.,.,438:2130:60,13	.	0/1:.,.,-170.467,.,.,.,.,.,.,.:138:63:48,.,.:1618,.,.:2304	0/1:-47.6684,0,-76.5981,.,.,.,.,.,.,.:77:30:22,.,.:739,.,.:1079:30,22	.	1/2:.,.,-60.9759,.,0,-176.026,.,.,.,.:209:0:85,47,.:2599,1271,.:0	0/1:-145.14,0,-235.997,.,.,.,.,.,.,.:263:94:69,.,.:2337,.,.:3340:94,69	.	.	.	0/1:.,.,-161.371,.,.,.,.,.,.,.:140:59:42,.,.:1263,.,.:2065	0/2:.,.,.,.,.,-168.079,.,.,.,.:119:52:.,26,.:.,678,.:1842	0/2:.,.,.,.,.,-85.9883,.,.,.,.:88:29:.,29,.:.,741,.:1012	0/1:.,.,-99.084,.,.,.,.,.,.,.:133:38:56,.,.:1881,.,.:1370	.	.
+chr1	237965133	.	ATTTTTTTTTTTTGTCATTG	ATTTTTTTTTTTGTCATTG	168.93	.	AB=0.166667;ABP=124.613;AC=1;AF=0.5;AN=2;AO=21;CIGAR=1M1D18M;DP=126;DPB=125.25;DPRA=0;EPP=3.1137;EPPR=8.33041;GTI=0;LEN=1;MEANALT=13;MQM=40.381;MQMR=41.925;NS=1;NUMALT=1;ODDS=38.8967;PAIRED=0.952381;PAIREDR=1;PAO=0.333333;PQA=11.6667;PQR=11.6667;PRO=0.333333;QA=739;QR=2909;RO=80;RPL=3;RPP=26.2761;RPPR=34.3881;RPR=18;RUN=1;SAF=8;SAP=5.59539;SAR=13;SF=10;SRF=42;SRP=3.44459;SRR=38;TYPE=del	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	0/1:-32.8705,0,-222.35:126:80:21:739:2909:80,21	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr1	237972189	.	A	G	875.47	.	AB=0.555556;ABP=4.45795;AC=2;AF=0.5;AN=4;AO=30;CIGAR=1X;DP=124;DPB=54;DPRA=0;EPP=3.0103;EPPR=3.37221;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=42;NS=1;NUMALT=1;ODDS=125.463;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1137;QR=910;RO=24;RPL=10;RPP=10.2485;RPPR=6.26751;RPR=20;RUN=1;SAF=21;SAP=13.4334;SAR=9;SF=17,31;SRF=20;SRP=26.1727;SRR=4;TYPE=snp	GT:GL:DP:RO:AO:QA:QR	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-82.4952,0,-62.7304:54:24:30:1137:910	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-110.793,0,-64.5453:70:27:43:1527:986	.	.	.	.	.
+chr1	237982383	.	C	A	1449.75	.	AB=0.542056;ABP=4.65412;AC=1;AF=0.5;AN=2;AO=58;CIGAR=1X;DP=107;DPB=107;DPRA=0;EPP=3.16006;EPPR=5.18177;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=41.9592;NS=1;NUMALT=1;ODDS=272.782;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2127;QR=1806;RO=49;RPL=22;RPP=10.3484;RPPR=5.18177;RPR=36;RUN=1;SAF=32;SAP=4.35811;SAR=26;SF=23;SRF=28;SRP=5.18177;SRR=21;TYPE=snp	GT:GL:DP:RO:AO:QA:QR	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-152.073,0,-125.221:107:49:58:2127:1806	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr1	237991767	.	T	C	2352.16	.	AB=0.545455;ABP=6.95843;AC=2;AF=0.5;AN=4;AO=120;CIGAR=1X;DP=346;DPB=220;DPRA=0;EPP=13.4334;EPPR=15.518;GTI=0;LEN=1;MEANALT=1;MQM=41.8333;MQMR=41.64;NS=1;NUMALT=1;ODDS=538.946;PAIRED=0.991667;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=4431;QR=3590;RO=100;RPL=83;RPP=41.3006;RPPR=17.6895;RPR=37;RUN=1;SAF=43;SAP=23.9288;SAR=77;SF=17,31;SRF=41;SRP=10.0459;SRR=59;TYPE=snp	GT:GL:DP:RO:AO:QA:QR	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-316.046,0,-244.442:220:100:120:4431:3590	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-175.807,0,-145.356:126:58:68:2465:2109	.	.	.	.	.
+chr1	237993877	.	G	C	1792.61	.	AB=0.557252;ABP=6.73993;AC=1;AF=0.5;AN=2;AO=73;CIGAR=1X;DP=131;DPB=131;DPRA=0;EPP=11.607;EPPR=3.0103;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=42;NS=1;NUMALT=1;ODDS=303.674;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2585;QR=2035;RO=58;RPL=39;RPP=3.75395;RPPR=8.40154;RPR=34;RUN=1;SAF=30;SAP=8.03741;SAR=43;SF=24;SRF=26;SRP=4.35811;SRR=32;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-186.356,0,-138.069:131:58:73:2585:2035:58,73	.	.	.	.	.	.	.	.	.	.	.	.
+chr10	18430167	.	G	C	271.11	.	AB=0;ABP=0;AC=2;AF=1;AN=2;AO=9;CIGAR=1X;DP=9;DPB=9;DPRA=0;EPP=9.04217;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=0;NS=1;NUMALT=1;ODDS=17.0818;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=335;QR=0;RO=0;RPL=5;RPP=3.25157;RPPR=0;RPR=4;RUN=1;SAF=5;SAP=3.25157;SAR=4;SF=6;SRF=0;SRP=0;SRR=0;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	1/1:-29.4813,-2.70927,0:9:0:9:335:0:0,9	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr10	18439769	.	AATAATCTTATTTGTCTTTTTTTTTTTTTTTTTTTTTTTTTAGTCATATGG	AATAATCTTATTTGTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	29.46	.	AB=0;ABP=0;AC=2;AF=1;AN=2;AO=1;CIGAR=41M2X1M2X1M1X1M2X;DP=19;DPB=23.1373;DPRA=0;EPP=5.18177;EPPR=0;GTI=0;LEN=51;MEANALT=17;MQM=23;MQMR=0;NS=1;NUMALT=1;ODDS=3.14657;PAIRED=0;PAIREDR=0;PAO=2;PQA=38;PQR=0;PRO=0;QA=22;QR=0;RO=0;RPL=1;RPP=5.18177;RPPR=0;RPR=0;RUN=1;SAF=1;SAP=5.18177;SAR=0;SF=12;SRF=0;SRP=0;SRR=0;TYPE=complex	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	.	.	1/1:-3.81024,-0.90309,0:19:0:1:22:0:0,1	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr10	18439775	.	CTTATTTGTCTTTTTTTTTTTTTTTTTTTTTTTTTAGTCATATGG	CTTATTTGTCTTTTTTTTTTTTTTTTTTTTTTAGTCATATGG,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAGTCATATGG	57.19	.	AB=0;ABP=0;AC=2,4;AF=1;AN=6;AO=2;CIGAR=1X2M1X2M2D1M1X35M;DP=85;DPB=35.5556;DPRA=0;EPP=3.0103;EPPR=3.0103;GTI=0;LEN=43;MEANALT=26;MQM=23;MQMR=41;NS=1;NUMALT=1;ODDS=3.00573;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=81.3333;PRO=2.16667;QA=40;QR=67;RO=2;RPL=1;RPP=3.0103;RPPR=3.0103;RPR=1;RUN=1;SAF=0;SAP=7.35324;SAR=2;SF=9,10,16;SRF=2;SRP=7.35324;SRR=0;TYPE=complex	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	2/2:-2.16775,.,.,-5.24573,.,0:31:2:.,2:.,40:67:2,2	1/1:-6.64934,-0.60206,0,.,.,.:25:0:2,.:78,.:0:0,2	.	.	.	.	.	2/2:-9.80863,.,.,-15.3225,.,0:29:1:.,2:.,25:34:1,2	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr10	18439777	.	TATTTGTCTTTTTTTTTTTTTTTTTTTTTTTTTAGTCATATGG	TATTTGTCTTTTTTTTTTTTTTTTTTTTTTTTAGTCATATGG	134.10	.	AB=0;ABP=0;AC=2;AF=1;AN=2;AO=7;CIGAR=8M1D34M;DP=114;DPB=119.14;DPRA=0;EPP=3.32051;EPPR=3.73412;GTI=0;LEN=1;MEANALT=74;MQM=41.7143;MQMR=36;NS=1;NUMALT=1;ODDS=7.83139;PAIRED=1;PAIREDR=1;PAO=10.9167;PQA=370.75;PQR=370.75;PRO=10.9167;QA=267;QR=102;RO=3;RPL=3;RPP=3.32051;RPPR=3.73412;RPR=4;RUN=1;SAF=7;SAP=18.2106;SAR=0;SF=25;SRF=3;SRP=9.52472;SRR=0;TYPE=del	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	1/1:-14.8879,-16.5529,0:114:3:7:267:102:3,7	.	.	.	.	.	.	.	.	.	.	.
+chr10	18439779	.	TTTGTCTTTTTTTTTTTTTTTTTTTTTTTTTAGTCATATGG	TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAGTCATATGG	129.53	.	AB=0;ABP=0;AC=2;AF=1;AN=2;AO=7;CIGAR=3M1X1M1X35M;DP=37;DPB=42.0244;DPRA=0;EPP=10.7656;EPPR=3.0103;GTI=0;LEN=41;MEANALT=23;MQM=28.5714;MQMR=42;NS=1;NUMALT=1;ODDS=11.3025;PAIRED=1;PAIREDR=1;PAO=0.333333;PQA=9;PQR=187.083;PRO=5.16667;QA=141;QR=68;RO=2;RPL=1;RPP=10.7656;RPPR=3.0103;RPR=6;RUN=1;SAF=0;SAP=18.2106;SAR=7;SF=0;SRF=2;SRP=7.35324;SRR=0;TYPE=complex	GT:GL:DP:RO:AO:QA:QR:AD	1/1:-16.3808,-22.5941,0:37:2:7:141:68:2,7	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr10	18439784	.	CTTTTTTTTTTTTTTTTTTTTTTTTTAGTCATATGG	TTTTTTTTTTTTTTTTTTTTTTTTTTAGTCATATGG,CTTTTTTTTTTTTTTTTTTTTTTTTAGTCATATGG,CTTTTTTTTTTTTTTTTTTTTTTTAGTCATATGG	60.58	.	AB=0;ABP=0;AC=5,2,1;AF=1;AN=12;AO=2;CIGAR=1X;DP=168;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=0;NS=1;NUMALT=1;ODDS=4.1336;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=38;QR=0;RO=0;RPL=0;RPP=7.35324;RPPR=0;RPR=2;RUN=1;SAF=0;SAP=7.35324;SAR=2;SF=1,2,19,27,30,31;SRF=0;SRP=0;SRR=0;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	1/1:.,.,0,.,.,.,.,.,.,.:2:0:2,.,.:38,.,.:0	0/3:.,.,.,.,.,.,.,.,.,-10.7375:44:6:.,.,12:.,.,382:220	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:.,.,-35.9925,.,.,.,.,.,.,.:21:14:7,.,.:202,.,.:515	.	.	.	.	.	.	.	1/1:-3.04348,-7.22472,0,.,.,.,.,.,.,.:23:0:2,.,.:50,.,.:0:0,2	.	.	0/2:.,.,.,.,.,-2.27474,.,.,.,.:37:4:.,8,.:.,269,.:148	0/2:.,.,.,.,.,-12.6994,.,.,.,.:41:9:.,9,.:.,302,.:329	.	.	.	.	.
+chr10	18439810	.	AGTCATA	TGTCATA,TTTTTTT	47.91	.	AB=0.5;ABP=3.0103;AC=2,1;AF=0.5;AN=6;AO=24;CIGAR=1X;DP=116;DPB=48;DPRA=0;EPP=39.2015;EPPR=18.9659;GTI=0;LEN=1;MEANALT=2;MQM=28.9583;MQMR=26.6087;NS=1;NUMALT=1;ODDS=6.01593;PAIRED=0.833333;PAIREDR=0.956522;PAO=0;PQA=0;PQR=0;PRO=0;QA=439;QR=556;RO=23;RPL=22;RPP=39.2015;RPPR=3.10471;RPR=2;RUN=1;SAF=24;SAP=55.1256;SAR=0;SF=13,22,29;SRF=12;SRP=3.10471;SRR=11;TYPE=snp	GT:GL:DP:RO:AO:QA:QR	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:.,.,-21.558,.,.,.:48:23:24,.:439,.:556	.	.	.	.	.	.	.	.	0/2:-22.3333,.,.,0,.,-38.7578:32:13:.,10:.,329:438	.	.	.	.	.	.	0/1:.,.,-22.1508,.,.,.:36:19:17,.:371,.:557	.	.	.	.	.	.	.
+chr10	18439926	.	T	C	818.41	.	AB=0.444444;ABP=4.45795;AC=7;AF=0.5;AN=14;AO=24;CIGAR=1X;DP=572;DPB=54;DPRA=0;EPP=16.0391;EPPR=7.64277;GTI=0;LEN=1;MEANALT=1;MQM=41.8333;MQMR=40.1333;NS=1;NUMALT=1;ODDS=115.742;PAIRED=0.958333;PAIREDR=0.966667;PAO=0;PQA=0;PQR=0;PRO=0;QA=848;QR=1060;RO=30;RPL=12;RPP=3.0103;RPPR=7.64277;RPR=12;RUN=1;SAF=8;SAP=8.80089;SAR=16;SF=8,11,21,25,28,30,34;SRF=16;SRP=3.29983;SRR=14;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	0/1:-57.6215,0,-72.1105:54:30:24:848:1060	.	.	0/1:-128.778,0,-174.453:124:68:56:1987:2549	.	.	.	.	.	.	.	.	.	0/1:-25.3406,0,-115.033:57:42:14:486:1535:42,14	.	.	.	0/1:-184.958,0,-157.136:142:65:77:2699:2387:65,77	.	.	0/1:-96.1596,0,-106.711:78:40:38:1372:1503	.	0/1:-66.7558,0,-69.3484:52:26:26:946:996	.	.	.	0/1:-66.7586,0,-86.2568:65:34:31:1055:1235	.	.
+chr10	18690063	.	TTATTTTGTCT	TT	1192.53	.	AB=0.422857;ABP=12.056;AC=1;AF=0.5;AN=2;AO=74;CIGAR=1M9D1M;DP=175;DPB=114.636;DPRA=0;EPP=4.06669;EPPR=7.26639;GTI=0;LEN=9;MEANALT=2;MQM=32.0541;MQMR=41.98;NS=1;NUMALT=1;ODDS=274.59;PAIRED=1;PAIREDR=1;PAO=1;PQA=0;PQR=0;PRO=1;QA=2642;QR=3755;RO=100;RPL=58;RPP=54.7735;RPPR=41.3151;RPR=16;RUN=1;SAF=32;SAP=5.94472;SAR=42;SF=16;SRF=36;SRP=20.0346;SRR=64;TYPE=del	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-132.225,0,-271.75:175:100:74:2642:3755:100,74	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr10	18789724	.	T	G	2220.68	.	AB=0.57377;ABP=5.89373;AC=27;AF=0.5;AN=44;AO=35;CIGAR=1X;DP=2846;DPB=61;DPRA=0;EPP=10.5174;EPPR=6.01695;GTI=0;LEN=1;MEANALT=1;MQM=41.4571;MQMR=40.5;NS=1;NUMALT=1;ODDS=130.631;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1341;QR=993;RO=26;RPL=9;RPP=20.9405;RPPR=19.3799;RPR=26;RUN=1;SAF=21;SAP=6.05036;SAR=14;SF=1,2,3,5,6,8,9,11,13,16,17,18,21,22,26,28,30,31,33,34,35,36;SRF=16;SRP=6.01695;SRR=10;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	0/1:-96.4699,0,-64.6773:61:26:35:1341:993	0/1:-176.14,0,-153.55:130:61:69:2487:2226	0/1:-162.427,0,-162.098:122:61:61:2306:2304:61,61	.	0/1:-189.011,0,-169.008:133:64:69:2653:2419:64,69	0/1:-150.46,0,-78.5735:85:32:53:2038:1202:32,53	.	0/1:-158.405,0,-148.521:116:56:60:2247:2122	1/1:-406.431,-37.3277,0:124:0:124:4704:0:0,124	.	1/1:-640.256,-59.905,0:199:0:199:7422:0	.	0/1:-274.343,0,-285.672:213:108:105:3927:4048	.	.	0/1:-181.105,0,-217.758:151:81:70:2622:3043:81,70	0/1:-234.203,0,-194.844:163:75:88:3291:2820	0/1:-85.7342,0,-104.063:73:40:33:1243:1453	.	.	0/1:-40.0622,0,-213.576:97:76:21:797:2802:76,21	0/1:-118.138,0,-148.06:103:57:46:1721:2066	.	.	.	1/1:-643.778,-61.1091,0:203:0:203:7468:0	.	1/1:-357.988,-33.7154,0:112:0:112:4153:0	.	0/1:-172.761,0,-168.538:129:64:65:2449:2399	0/1:-194.828,0,-146.759:133:59:74:2713:2155	.	1/1:-421.953,-38.8329,0:130:0:129:4886:0	0/1:-167.992,0,-159.024:123:61:62:2372:2266	0/1:-116.408,0,-118.123:89:44:44:1652:1675	0/1:-175.49,0,-247.37:157:90:67:2581:3410
+chr10	18803338	.	A	G	3969.62	.	AB=0.528384;ABP=4.61283;AC=2;AF=0.5;AN=4;AO=121;CIGAR=1X;DP=623;DPB=229;DPRA=0;EPP=9.48883;EPPR=3.73412;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=41.3056;NS=1;NUMALT=1;ODDS=591.75;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=4506;QR=4041;RO=108;RPL=84;RPP=42.6531;RPPR=125.337;RPR=37;RUN=1;SAF=67;SAP=6.04318;SAR=54;SF=8,11;SRF=50;SRP=4.2971;SRR=58;TYPE=snp	GT:GL:DP:RO:AO:QA:QR	.	.	.	.	.	.	.	.	0/1:-321.138,0,-277.432:229:108:121:4506:4041	.	.	0/1:-498.442,0,-490.145:394:194:199:7154:7023	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr10	18816565	.	G	A	3536.12	.	AB=0.53629;ABP=5.84722;AC=2;AF=0.5;AN=4;AO=133;CIGAR=1X;DP=538;DPB=248;DPRA=0;EPP=3.41847;EPPR=3.18024;GTI=0;LEN=1;MEANALT=1;MQM=41.6692;MQMR=41.7652;NS=1;NUMALT=1;ODDS=645.755;PAIRED=1;PAIREDR=0.982609;PAO=0;PQA=0;PQR=0;PRO=0;QA=4705;QR=4210;RO=115;RPL=84;RPP=23.0107;RPPR=23.5732;RPR=49;RUN=1;SAF=69;SAP=3.41847;SAR=64;SF=9,36;SRF=55;SRP=3.48236;SRR=60;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	0/1:-334.207,0,-289.545:248:115:133:4705:4210:115,133	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-392.532,0,-346.588:290:137:152:5528:4996
+chr10	18816633	.	C	T	3699.35	.	AB=0;ABP=0;AC=11;AF=1;AN=20;AO=245;CIGAR=1X;DP=2547;DPB=246;DPRA=0;EPP=8.54977;EPPR=0;GTI=0;LEN=1;MEANALT=2;MQM=41.9224;MQMR=0;NS=1;NUMALT=1;ODDS=344.247;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=9199;QR=0;RO=0;RPL=113;RPP=6.2099;RPPR=0;RPR=132;RUN=1;SAF=133;SAP=6.91895;SAR=112;SF=3,7,15,19,21,23,26,31,32,34;SRF=0;SRP=0;SRR=0;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	1/1:-793.508,-73.7524,0:246:0:245:9199:0:0,245	.	.	.	0/1:-421.007,0,-406.198:320:157:163:6019:5811	.	.	.	.	.	.	.	0/1:-389.37,0,-337.873:277:131:145:5463:4878	.	.	.	0/1:-348.388,0,-310.424:252:120:131:4922:4485	.	0/1:-74.7293,0,-387.084:183:143:40:1498:5097:143,40	.	0/1:-428.055,0,-360.596:299:139:160:5996:5202	.	.	0/1:-410.212,0,-383.766:318:153:163:5856:5542	.	.	.	.	0/1:-279.204,0,-237.553:206:95:110:3933:3453	0/1:-269.697,0,-226.546:193:88:103:3780:3286	.	0/1:-377.564,0,-276.757:253:109:143:5236:4074	.	.
+chr10	18828371	.	C	T	8608.25	.	AB=0;ABP=0;AC=11;AF=1;AN=20;AO=639;CIGAR=1X;DP=6368;DPB=639;DPRA=0;EPP=12.5559;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=41.4851;MQMR=0;NS=1;NUMALT=1;ODDS=890.447;PAIRED=0.982786;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=23843;QR=0;RO=0;RPL=315;RPP=3.28556;RPPR=0;RPR=324;RUN=1;SAF=321;SAP=3.04088;SAR=318;SF=3,7,15,19,21,23,26,31,32,34;SRF=0;SRP=0;SRR=0;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	1/1:-2042.71,-192.358,0:639:0:639:23843:0:0,639	.	.	.	0/1:-1040.08,0,-1207.29:876:467:409:15133:17143	.	.	.	.	.	.	.	0/1:-918.035,0,-857.52:697:342:353:13065:12430	.	.	.	0/1:-844.828,0,-997.061:720:383:336:12407:14111	.	0/1:-191.51,0,-653.312:332:240:92:3378:8656:240,92	.	0/1:-961.047,0,-1188.17:829:451:378:14055:16716	.	.	0/1:-800.808,0,-1031.62:740:403:336:11908:14644	.	.	.	.	0/1:-455.178,0,-579.733:409:224:184:6717:8168	0/1:-722.889,0,-691.559:547:270:277:10274:9959	.	0/1:-732.753,0,-775.725:579:297:282:10498:11034	.	.
+chr10	18828635	.	T	G	1708.22	.	AB=0.571429;ABP=5.49198;AC=25;AF=0.5;AN=46;AO=32;CIGAR=1X;DP=4436;DPB=56;DPRA=0;EPP=3.0103;EPPR=5.59539;GTI=0;LEN=1;MEANALT=2;MQM=33.875;MQMR=36.4762;NS=1;NUMALT=1;ODDS=76.9566;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=994;QR=702;RO=21;RPL=26;RPP=30.1537;RPPR=26.2761;RPR=6;RUN=1;SAF=10;SAP=12.7819;SAR=22;SF=1,2,4,5,6,7,9,13,14,15,16,17,18,21,22,26,27,28,30,31,33,35,36;SRF=7;SRP=8.07707;SRR=14;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	0/1:-64.0623,0,-42.341:56:21:32:994:702	0/1:-184.977,0,-125.252:165:73:89:2939:2149	.	0/1:-125.549,0,-231.003:185:109:71:2190:3583	0/1:-268.051,0,-228.574:264:124:134:4519:3937:124,134	0/1:-125.003,0,-154.118:156:82:70:2257:2482:82,70	0/1:-202.463,0,-270.36:263:138:120:3734:4551	.	1/1:-354.216,-35.6342,0:162:9:148:4819:156:9,148	.	.	.	0/1:-242.331,0,-273.004:300:156:135:4088:4722	0/1:-131.31,0,-155.444:156:79:67:2160:2600	0/1:-210.584,0,-127.005:201:85:115:3492:2444	0/1:-195.573,0,-156.73:180:84:95:3203:2714:84,95	0/1:-186.735,0,-214.364:221:115:102:3344:3498	0/1:-134.113,0,-102.254:123:62:60:2061:1788	.	.	0/1:-77.2894,0,-241.446:168:120:47:1514:3555:120,47	0/1:-105.734,0,-141.855:162:85:71:2006:2528	.	.	.	0/1:-185.49,0,-298.718:318:182:129:3677:5198	0/1:-271.571,0,-227.523:305:144:156:4743:4132:144,156	0/1:-106.908,0,-164.915:158:88:68:1974:2792	.	0/1:-199.08,0,-154.097:195:89:101:3181:2628	0/1:-193.806,0,-186.24:229:108:114:3264:3163	.	1/1:-274.5,-22.2244,0:127:11:113:3579:188	.	0/1:-110.543,0,-133.902:138:70:67:2026:2244	0/1:-176.456,0,-219.162:204:107:93:2904:3394
+chr10	18828661	.	CCG	CCT	3581.04	.	AB=0;ABP=0;AC=4;AF=1;AN=4;AO=112;CIGAR=2M1X;DP=366;DPB=135.333;DPRA=0;EPP=25.423;EPPR=0;GTI=0;LEN=1;MEANALT=11;MQM=34.4196;MQMR=0;NS=1;NUMALT=1;ODDS=173.733;PAIRED=0;PAIREDR=0;PAO=5;PQA=170;PQR=170;PRO=5;QA=3415;QR=0;RO=0;RPL=49;RPP=6.81038;RPPR=0;RPR=63;RUN=1;SAF=60;SAP=4.25114;SAR=52;SF=21,27;SRF=0;SRP=0;SRR=0;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	1/1:-271.774,-39.736,0:130:0:112:3415:0:0,112	.	.	.	.	.	1/1:-457.451,-69.3519,0:236:2:200:6363:26:2,200	.	.	.	.	.	.	.	.	.
+chr10	18828662	.	CG	CT	1680.04	.	AB=0.354839;ABP=20.0318;AC=7;AF=0.5;AN=8;AO=33;CIGAR=1M1X;DP=414;DPB=96.5;DPRA=0;EPP=22.0271;EPPR=30.1939;GTI=0;LEN=1;MEANALT=6;MQM=32.3333;MQMR=31.9074;NS=1;NUMALT=1;ODDS=89.3441;PAIRED=0.909091;PAIREDR=0.87037;PAO=3.5;PQA=119.5;PQR=119.5;PRO=3.5;QA=1047;QR=1600;RO=54;RPL=16;RPP=3.0761;RPPR=5.5839;RPR=17;RUN=1;SAF=14;SAP=4.65535;SAR=19;SF=0,3,16,24;SRF=25;SRP=3.6537;SRR=29;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	0/1:-47.6487,0,-89.6816:93:54:33:1047:1600:54,33	.	.	1/1:-338.025,-45.1757,0:156:2:146:4453:27:2,146	.	.	.	.	.	.	.	.	.	.	.	.	1/1:-195.144,-35.9363,0:103:5:91:2821:80:5,91	.	.	.	.	.	.	.	1/1:-122.049,-21.0721,0:62:0:58:1603:0:0,58	.	.	.	.	.	.	.	.	.	.	.	.
+chr10	18828663	.	G	T	2080.43	.	AB=0;ABP=0;AC=51;AF=1;AN=60;AO=31;CIGAR=1X;DP=4182;DPB=34;DPRA=0;EPP=23.254;EPPR=5.18177;GTI=0;LEN=1;MEANALT=3;MQM=28.2903;MQMR=3;NS=1;NUMALT=1;ODDS=47.0294;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=973;QR=15;RO=1;RPL=17;RPP=3.64073;RPPR=5.18177;RPR=14;RUN=1;SAF=10;SAP=11.486;SAR=21;SF=1,2,4,5,6,7,8,9,10,11,12,13,14,15,17,18,19,20,22,23,26,28,29,30,31,32,33,34,35,36;SRF=0;SRP=5.18177;SRR=1;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	1/1:-65.1528,-9.39369,0:34:1:31:973:15	1/1:-180.728,-24.9844,0:100:2:92:2565:45	.	1/1:-222.098,-29.6813,0:118:2:105:3064:29	1/1:-339.121,-46.1286,0:171:3:162:4959:40:3,162	0/1:-79.415,0,-64.6128:108:47:54:1612:1245:47,54	1/1:-367.656,-52.1167,0:182:1:176:5268:13	1/1:-219.732,-28.4213,0:109:2:103:2965:43	1/1:-222.854,-26.8809,0:111:3:103:3269:64:3,103	0/1:-97.9818,0,-91.7138:120:54:62:1876:1718:54,62	1/1:-395.92,-59.6888,0:221:3:206:5792:44	0/1:-109.994,0,-181.465:181:96:80:2447:2983:96,80	1/1:-524.415,-63.1565,0:247:6:231:7097:105	1/1:-190.331,-28.2968,0:97:0:94:2641:0	1/1:-272.016,-37.2619,0:144:3:134:3917:45	.	0/1:-86.2797,0,-132.819:155:78:70:2028:2313	1/1:-144.198,-20.1621,0:75:1:70:1966:14	1/1:-310.065,-40.1268,0:153:2:142:4309:44	0/1:-130.264,0,-132.056:154:74:77:2493:2189:74,77	.	1/1:-233.396,-32.7898,0:131:4:118:3382:56	1/1:-288.668,-38.9402,0:146:4:138:4155:70	.	.	1/1:-469.68,-64.118,0:262:12:239:6658:186	.	1/1:-204.824,-31.0874,0:112:2:106:3126:27	0/1:-158.852,0,-221.006:238:128:104:3072:3765	0/1:-114.787,0,-94.0033:136:63:67:2032:1826	1/1:-367.548,-45.1968,0:181:5:164:4944:85	1/1:-198.051,-26.7917,0:99:0:89:2674:0	1/1:-159.34,-20.5134,0:82:2:75:2151:42	0/1:-97.9292,0,-69.5375:103:46:53:1732:1328	1/1:-160.684,-24.6845,0:86:0:82:2432:0	0/1:-71.225,0,-133.137:126:71:52:1452:2168
+chr10	18828669	.	GTTTTTTTTTTTTTTTTTTTGAAGTC	GTTTTTTTTTTTTTTTTTTGAAGTC,GTTTTTTTTTTTTTTTTTGAAGTC,GCTTTTTTTTTTTTTTTTTGAAGTC,GTTTTTTTTTTTTTTTTGAAGTC,GCTTTTTTTTTTTTTTTTTTGAAGTC,TTTTTTTTTTTTTTTTTTTTGAAGTC	401.60	.	AB=0.25;ABP=50.7827;AC=14,9,3,3,3,2;AF=0.5;AN=44;AO=22;CIGAR=1M1D24M;DP=3021;DPB=89.2692;DPRA=0;EPP=9.32731;EPPR=4.16842;GTI=0;LEN=1;MEANALT=21;MQM=34.0909;MQMR=29.7;NS=1;NUMALT=1;ODDS=24.8812;PAIRED=0.909091;PAIREDR=0.9;PAO=3.33333;PQA=124.333;PQR=159.333;PRO=4.33333;QA=506;QR=986;RO=30;RPL=13;RPP=4.58955;RPPR=13.4334;RPR=9;RUN=1;SAF=6;SAP=12.8806;SAR=16;SF=0,3,5,6,7,8,9,10,11,12,15,16,19,20,21,23,24,25,27,29,32,34;SRF=8;SRP=17.1973;SRR=22;TYPE=del	GT:GL:DP:RO:AO:QA:QR:AD	0/1:-18.0937,0,-47.3162,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.:88:30:22,.,.,.,.,.:506,.,.,.,.,.:986:30,22	.	.	2/4:-94.6958,.,.,-56.7082,.,-36.585,.,.,.,.,-48.1748,.,0,.,-27.1488,.,.,.,.,.,.,.,.,.,.,.,.,.:136:6:.,39,.,42,.,.:.,843,.,940,.,.:174:6,39,42	.	0/1:-10.9656,0,-6.95154,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.:146:19:22,.,.,.,.,.:550,.,.,.,.,.:628:19,22	6/6:-35.4582,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,-36.2396,.,.,.,.,.,0:106:16:.,.,.,.,.,6:.,.,.,.,.,138:508:16,6	2/2:.,.,.,.,.,0,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.:155:6:.,36,.,.,.,.:.,827,.,.,.,.:182	0/1:.,.,-52.1384,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.:102:29:24,.,.,.,.,.:562,.,.,.,.,.:932	3/5:.,.,.,.,.,.,.,.,.,-30.5523,.,.,.,.,.,.,.,.,0,.,-40.7874,.,.,.,.,.,.,.:96:4:.,.,25,.,17,.:.,.,700,.,573,.:101:4,25,17	0/1:-24.4755,0,-38.3083,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.:95:23:19,.,.,.,.,.:449,.,.,.,.,.:730:23,19	0/1:.,.,-90.8158,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.:204:51:51,.,.,.,.,.:951,.,.,.,.,.:1636	0/1:-64.1551,0,-54.1981,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.:158:34:44,.,.,.,.,.:1098,.,.,.,.,.:1131:34,44	.	.	4/4:.,.,.,.,.,.,.,.,.,.,.,.,.,.,0,.,.,.,.,.,.,.,.,.,.,.,.,.:123:3:.,.,.,27,.,.:.,.,.,570,.,.:86	5/5:-15.617,.,.,.,.,.,.,.,.,.,.,.,.,.,.,-8.15335,.,.,.,.,0,.,.,.,.,.,.,.:85:8:.,.,.,.,12,.:.,.,.,.,357,.:255:8,12	.	.	1/2:.,.,-42.8886,.,0,-29.6524,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.:142:10:32,44,.,.,.,.:737,885,.,.,.,.:337	0/1:-42.774,0,-25.7754,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.:145:22:36,.,.,.,.,.:851,.,.,.,.,.:715:22,36	1/2:-41.8913,-18.3816,-26.6716,-13.4147,0,-18.5736,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.:116:11:18,28,.,.,.,.:501,602,.,.,.,.:333:11,18,28	.	1/2:.,.,-53.0433,.,0,-35.1892,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.:137:3:37,43,.,.,.,.:796,997,.,.,.,.:103	1/2:-25.098,-5.48182,-8.68797,-12.4943,0,-17.8068,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.:57:5:18,11,.,.,.,.:324,209,.,.,.,.:154:5,18,11	0/1:-45.0307,0,-137.434,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.:320:83:74,.,.,.,.,.:1504,.,.,.,.,.:2767:83,74	.	3/3:-29.1997,.,.,.,.,.,-25.5113,.,.,0,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.:218:17:.,.,26,.,.,.:.,.,651,.,.,.:551:17,26	.	0/1:.,.,-52.3993,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.:214:37:46,.,.,.,.,.:1025,.,.,.,.,.:1176	.	.	1/2:.,.,-37.206,.,0,-12.2482,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.:91:5:19,30,.,.,.,.:412,713,.,.,.,.:155	.	0/2:.,.,.,.,.,-21.7763,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.:87:19:.,23,.,.,.,.:.,479,.,.,.,.:603	.	.
+chr10	18828670	.	T	C	244.70	.	AB=0.25;ABP=11.6962;AC=12;AF=0.5;AN=24;AO=4;CIGAR=1X;DP=834;DPB=16;DPRA=0;EPP=5.18177;EPPR=9.52472;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=33.9167;NS=1;NUMALT=1;ODDS=2.32425;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=123;QR=262;RO=12;RPL=3;RPP=5.18177;RPPR=3.73412;RPR=1;RUN=1;SAF=2;SAP=3.0103;SAR=2;SF=1,2,13,14,17,18,26,28,31,33,35,36;SRF=4;SRP=5.9056;SRR=8;TYPE=snp	GT:GL:DP:RO:AO:QA:QR	.	0/1:-6.1959,0,-14.7824:16:12:4:123:262	0/1:-27.0377,0,-37.6897:55:26:22:599:643	.	.	.	.	.	.	.	.	.	.	0/1:-54.6357,0,-102.102:123:61:42:1118:1684	0/1:-20.7614,0,-34.6014:46:25:15:445:723	.	.	0/1:-21.4047,0,-116.583:98:68:23:724:1914	0/1:-8.82608,0,-24.4309:36:19:10:251:439	.	.	.	.	.	.	.	0/1:-49.3182,0,-93.5118:116:61:40:1063:1636	.	0/1:-31.9325,0,-45.5511:61:33:22:594:912	.	.	0/1:-38.0386,0,-58.0744:75:39:27:790:1036	.	0/1:-65.4215,0,-19.3641:66:18:35:1008:432	.	0/1:-31.1342,0,-36.5137:57:30:22:600:853	0/1:-33.725,0,-95.0711:85:54:26:777:1533
+chr10	21074724	.	T	C	1570.98	.	AB=0.658333;ABP=29.1404;AC=8;AF=0.5;AN=16;AO=79;CIGAR=1X;DP=1004;DPB=120;DPRA=0;EPP=17.5509;EPPR=14.9269;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=42;NS=1;NUMALT=1;ODDS=206.769;PAIRED=1;PAIREDR=0.97561;PAO=0;PQA=0;PQR=0;PRO=0;QA=2726;QR=1573;RO=41;RPL=22;RPP=36.6819;RPPR=7.30028;RPR=57;RUN=1;SAF=42;SAP=3.69747;SAR=37;SF=2,7,13,17,28,34,35,36;SRF=19;SRP=3.48696;SRR=22;TYPE=snp	GT:GL:DP:RO:AO:QA:QR	.	.	0/1:-201.91,0,-99.9517:120:41:79:2726:1573	.	.	.	.	0/1:-174.707,0,-289.683:181:107:74:2631:4011	.	.	.	.	.	0/1:-200.971,0,-187.441:150:72:78:2823:2689	.	.	.	0/1:-244.72,0,-128.827:143:53:90:3310:1987	.	.	.	.	.	.	.	.	.	.	0/1:-125.538,0,-105.421:94:42:52:1757:1556	.	.	.	.	.	0/1:-117.071,0,-170.858:113:64:48:1730:2367	0/1:-100.681,0,-96.1557:76:36:40:1415:1375	0/1:-169.836,0,-159.283:127:62:65:2391:2295
+chr10	21076100	.	C	A	1277.37	.	AB=0.391304;ABP=19.5324;AC=1;AF=0.5;AN=2;AO=63;CIGAR=1X;DP=161;DPB=161;DPRA=0;EPP=3.872;EPPR=6.20103;GTI=0;LEN=1;MEANALT=1;MQM=41.7143;MQMR=41.5714;NS=1;NUMALT=1;ODDS=294.124;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2239;QR=3538;RO=98;RPL=7;RPP=85.7675;RPPR=105.468;RPR=56;RUN=1;SAF=34;SAP=3.872;SAR=29;SF=7;SRF=58;SRP=10.1895;SRR=40;TYPE=snp	GT:GL:DP:RO:AO:QA:QR	.	.	.	.	.	.	.	0/1:-144.984,0,-256.648:161:98:63:2239:3538	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr10	21097546	.	G	A	2375.28	.	AB=0.469697;ABP=4.58955;AC=1;AF=0.5;AN=2;AO=93;CIGAR=1X;DP=198;DPB=198;DPRA=0;EPP=3.59403;EPPR=4.68544;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=42;NS=1;NUMALT=1;ODDS=546.929;PAIRED=0.978495;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3523;QR=3893;RO=105;RPL=54;RPP=8.26386;RPPR=18.0865;RPR=39;RUN=1;SAF=49;SAP=3.59403;SAR=44;SF=20;SRF=59;SRP=6.50534;SRR=46;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-244.82,0,-277.252:198:105:93:3523:3893:105,93	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr10	21106525	.	A	G	1611.55	.	AB=0.451613;ABP=6.16244;AC=1;AF=0.5;AN=2;AO=70;CIGAR=1X;DP=155;DPB=155;DPRA=0;EPP=3.50664;EPPR=3.03585;GTI=0;LEN=1;MEANALT=1;MQM=41.6857;MQMR=41.7765;NS=1;NUMALT=1;ODDS=371.073;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2530;QR=3183;RO=85;RPL=15;RPP=52.644;RPPR=37.9838;RPR=55;RUN=1;SAF=38;SAP=4.12706;SAR=32;SF=2;SRF=49;SRP=7.3277;SRR=36;TYPE=snp	GT:GL:DP:RO:AO:QA:QR	.	.	0/1:-173.08,0,-227.649:155:85:70:2530:3183	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr10	21106567	.	G	C	970.59	.	AB=0.47561;ABP=3.434;AC=1;AF=0.5;AN=2;AO=39;CIGAR=1X;DP=82;DPB=82;DPRA=0;EPP=3.51141;EPPR=5.48477;GTI=0;LEN=1;MEANALT=1;MQM=41.5128;MQMR=42;NS=1;NUMALT=1;ODDS=223.486;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1487;QR=1590;RO=43;RPL=21;RPP=3.51141;RPPR=5.48477;RPR=18;RUN=1;SAF=21;SAP=3.51141;SAR=18;SF=1;SRF=31;SRP=21.2406;SRR=12;TYPE=snp	GT:GL:DP:RO:AO:QA:QR	.	0/1:-102.993,0,-113.572:82:43:39:1487:1590	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr10	21108377	.	C	T	1828.07	.	AB=0;ABP=0;AC=16;AF=1;AN=28;AO=50;CIGAR=1X;DP=1857;DPB=50;DPRA=0;EPP=3.18402;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=41.62;MQMR=0;NS=1;NUMALT=1;ODDS=73.9199;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1817;QR=0;RO=0;RPL=27;RPP=3.70517;RPPR=0;RPR=23;RUN=1;SAF=23;SAP=3.70517;SAR=27;SF=1,4,9,11,14,15,16,19,21,22,25,30,32,36;SRF=0;SRP=0;SRR=0;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	1/1:-157.366,-15.0515,0:50:0:50:1817:0	.	.	0/1:-196.251,0,-194.283:153:78:75:2802:2766	.	.	.	.	0/1:-128.293,0,-183.727:123:70:53:1908:2541:70,53	.	1/1:-658.02,-62.6142,0:208:0:208:7648:0	.	.	0/1:-134.332,0,-141.999:110:58:52:1933:2011	0/1:-158.139,0,-162.712:122:62:60:2253:2299	0/1:-141.921,0,-151.405:115:60:55:2038:2138:60,55	.	.	0/1:-226.634,0,-188.119:163:75:86:3212:2722	.	0/1:-50.7126,0,-174.726:89:65:24:890:2316:65,24	0/1:-125.233,0,-122.754:98:49:48:1785:1748	.	.	0/1:-282.309,0,-329.934:238:128:110:4091:4630:128,110	.	.	.	.	0/1:-134.987,0,-180.068:123:69:54:1986:2500	.	0/1:-143.198,0,-196.16:132:75:56:2114:2717	.	.	.	0/1:-128.209,0,-207.515:133:80:53:1942:2845
+chr10	21108395	.	C	T	2201.92	.	AB=0.532164;ABP=4.54684;AC=1;AF=0.5;AN=2;AO=91;CIGAR=1X;DP=171;DPB=171;DPRA=0;EPP=4.94315;EPPR=9.95901;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=41.7625;NS=1;NUMALT=1;ODDS=454.179;PAIRED=0.989011;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3207;QR=2957;RO=80;RPL=40;RPP=5.89764;RPPR=3.98746;RPR=51;RUN=1;SAF=42;SAP=4.17955;SAR=49;SF=7;SRF=39;SRP=3.11887;SRR=41;TYPE=snp	GT:GL:DP:RO:AO:QA:QR	.	.	.	.	.	.	.	0/1:-227.39,0,-204.567:171:80:91:3207:2957	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr10	21112111	.	A	T	1491.96	.	AB=0.443038;ABP=5.23675;AC=18;AF=0.5;AN=30;AO=35;CIGAR=1X;DP=1392;DPB=79;DPRA=0;EPP=3.56868;EPPR=12.6832;GTI=0;LEN=1;MEANALT=1;MQM=41.4571;MQMR=42;NS=1;NUMALT=1;ODDS=188.033;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1327;QR=1677;RO=44;RPL=12;RPP=10.5174;RPPR=7.94546;RPR=23;RUN=1;SAF=26;SAP=20.9405;SAR=9;SF=0,3,8,13,14,18,19,20,24,25,26,29,30,32,35;SRF=30;SRP=15.6443;SRR=14;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	0/1:-90.1596,0,-121.482:79:44:35:1327:1677:44,35	.	.	0/1:-115.519,0,-89.1129:76:34:42:1596:1292:34,42	.	.	.	.	0/1:-80.6113,0,-87.4755:62:32:30:1145:1225	.	.	.	.	0/1:-212.049,0,-205.794:160:78:82:3013:2948	0/1:-106.861,0,-61.1505:62:24:38:1448:921	.	.	.	0/1:-87.8411,0,-106.01:72:39:33:1264:1472	0/1:-119.227,0,-97.6884:82:37:45:1655:1413	1/1:-226.73,-21.0721,0:70:0:70:2615:0:0,70	.	.	.	1/1:-214.765,-20.169,0:67:0:67:2473:0:0,67	0/1:-250.217,0,-216.843:176:82:94:3496:3119:82,94	0/1:-128.107,0,-192.685:128:75:53:1925:2682	.	.	1/1:-477.145,-45.1545,0:150:0:150:5553:0	0/1:-113.345,0,-124.378:90:46:44:1619:1748	.	0/1:-74.506,0,-82.215:59:31:28:1062:1182	.	.	0/1:-74.9975,0,-84.9349:59:31:28:1069:1185	.
+chr10	21112137	.	A	T	1496.86	.	AB=0.541284;ABP=4.62396;AC=1;AF=0.5;AN=2;AO=59;CIGAR=1X;DP=109;DPB=109;DPRA=0;EPP=53.3958;EPPR=53.2147;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=42;NS=1;NUMALT=1;ODDS=267.958;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2261;QR=1859;RO=50;RPL=21;RPP=13.6468;RPPR=3.0103;RPR=38;RUN=1;SAF=26;SAP=4.81373;SAR=33;SF=7;SRF=25;SRP=3.0103;SRR=25;TYPE=snp	GT:GL:DP:RO:AO:QA:QR	.	.	.	.	.	.	.	0/1:-162.486,0,-127.872:109:50:59:2261:1859	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr10	21115347	.	A	G	500.91	.	AB=0.4;ABP=6.48466;AC=2;AF=0.5;AN=4;AO=16;CIGAR=1X;DP=87;DPB=40;DPRA=0;EPP=5.18177;EPPR=8.80089;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=41.9167;NS=1;NUMALT=1;ODDS=80.1194;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=608;QR=924;RO=24;RPL=5;RPP=7.89611;RPPR=16.0391;RPR=11;RUN=1;SAF=9;SAP=3.55317;SAR=7;SF=23,33;SRF=10;SRP=4.45795;SRR=14;TYPE=snp	GT:GL:DP:RO:AO:QA:QR	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-40.8855,0,-67.9228:40:24:16:608:924	.	.	.	.	.	.	.	.	.	0/1:-73.738,0,-48.8871:47:19:28:1012:727	.	.	.
+chr10	21120096	.	G	A	1196.70	.	AB=0.515464;ABP=3.21178;AC=1;AF=0.5;AN=2;AO=50;CIGAR=1X;DP=97;DPB=97;DPRA=0;EPP=3.18402;EPPR=6.75262;GTI=0;LEN=1;MEANALT=1;MQM=41.92;MQMR=42;NS=1;NUMALT=1;ODDS=243.668;PAIRED=1;PAIREDR=0.978723;PAO=0;PQA=0;PQR=0;PRO=0;QA=1854;QR=1708;RO=47;RPL=17;RPP=14.1282;RPPR=31.8863;RPR=33;RUN=1;SAF=41;SAP=47.4821;SAR=9;SF=6;SRF=39;SRP=47.41;SRR=8;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	0/1:-131.46,0,-119.799:97:47:50:1854:1708:47,50	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr10	21120116	.	A	G	2072.10	.	AB=0.560345;ABP=6.67934;AC=25;AF=0.5;AN=40;AO=65;CIGAR=1X;DP=2459;DPB=116;DPRA=0;EPP=4.64726;EPPR=5.09662;GTI=0;LEN=1;MEANALT=1;MQM=41.7231;MQMR=41.2941;NS=1;NUMALT=1;ODDS=276.076;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2440;QR=1941;RO=51;RPL=26;RPP=8.65613;RPPR=18.3809;RPR=39;RUN=1;SAF=48;SAP=35.1147;SAR=17;SF=0,3,6,12,13,14,16,17,18,19,20,23,24,25,26,29,30,31,33,35;SRF=37;SRP=25.534;SRR=14;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	0/1:-175.14,0,-130.291:116:51:65:2440:1941:51,65	.	.	1/1:-341.302,-31.3071,0:104:0:104:3950:0:0,104	.	.	0/1:-144.792,0,-131.8:107:51:56:2041:1911:51,56	.	.	.	.	.	0/1:-236.441,0,-194.27:162:74:88:3306:2812:74,88	0/1:-258.433,0,-178.647:171:72:99:3610:2659	0/1:-158.828,0,-114.009:102:44:58:2190:1675	.	0/1:-100.88,0,-121.298:82:44:38:1450:1689:44,38	0/1:-155.837,0,-173.183:127:65:62:2234:2461	0/1:-83.2546,0,-113.07:75:42:33:1221:1567	0/1:-147.823,0,-129.897:108:50:58:2097:1878	0/1:-170.526,0,-199.272:142:75:67:2478:2853:75,67	.	.	0/1:-115.33,0,-178.578:112:65:47:1736:2457	1/1:-279.053,-25.8886,0:86:0:86:3222:0:0,86	0/1:-225.084,0,-283.823:196:107:89:3299:3977:107,89	1/1:-564.978,-52.9813,0:178:0:176:6570:0	.	.	1/1:-626.007,-56.2772,0:210:2:208:7351:76	0/1:-113.402,0,-148.153:99:55:44:1658:2053	0/1:-150.398,0,-145.74:113:55:58:2129:2077	.	1/1:-257.944,-24.6845,0:82:0:82:3010:0	.	0/1:-119.357,0,-111.048:87:43:44:1682:1582	.
+chr10	21134282	.	C	G	1398.07	.	AB=0.463158;ABP=4.13032;AC=10;AF=0.5;AN=18;AO=44;CIGAR=1X;DP=913;DPB=95;DPRA=0;EPP=10.1169;EPPR=29.6215;GTI=0;LEN=1;MEANALT=1;MQM=41.9091;MQMR=42;NS=1;NUMALT=1;ODDS=254.204;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1690;QR=1841;RO=51;RPL=26;RPP=6.16881;RPPR=3.3935;RPR=18;RUN=1;SAF=22;SAP=3.0103;SAR=22;SF=3,6,12,16,17,23,26,31,33;SRF=29;SRP=5.09662;SRR=22;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	0/1:-117.379,0,-130.785:95:51:44:1690:1841:51,44	.	.	0/1:-92.8295,0,-76.2051:64:30:34:1295:1101:30,34	.	.	.	.	.	0/1:-173.175,0,-237.605:154:87:67:2543:3288:87,67	.	.	.	0/1:-130.777,0,-81.0514:80:32:48:1818:1217:32,48	0/1:-127.029,0,-104.546:89:40:49:1789:1534	.	.	.	.	.	0/1:-147.909,0,-156.429:117:59:57:2113:2215	.	.	0/1:-151.527,0,-198.912:141:76:65:2231:2790	.	.	.	.	0/1:-117.174,0,-118.692:90:44:45:1665:1683	.	1/1:-265.193,-24.9855,0:83:0:83:3090:0	.	.	.
+chr10	21139389	.	T	C	646.03	.	AB=0.3;ABP=13.4334;AC=10;AF=0.5;AN=18;AO=9;CIGAR=1X;DP=450;DPB=30;DPRA=0;EPP=9.04217;EPPR=3.94093;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=42;NS=1;NUMALT=1;ODDS=33.8763;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=351;QR=794;RO=21;RPL=2;RPP=9.04217;RPPR=8.07707;RPR=7;RUN=1;SAF=5;SAP=3.25157;SAR=4;SF=3,6,12,16,17,23,26,31,33;SRF=10;SRP=3.1137;SRR=11;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	0/1:-21.5025,0,-59.9632:30:21:9:351:794:21,9	.	.	0/1:-62.524,0,-29.93:36:14:22:847:466:14,22	.	.	.	.	.	0/1:-65.1792,0,-121.905:73:44:29:1016:1663:44,29	.	.	.	0/1:-55.9979,0,-65.7783:46:25:21:806:928:25,21	0/1:-56.5919,0,-43.832:39:17:22:785:654	.	.	.	.	.	0/1:-61.8624,0,-60.1023:45:22:23:868:851	.	.	0/1:-108.307,0,-104.524:85:42:42:1554:1511	.	.	.	.	0/1:-81.3253,0,-67.9988:58:27:31:1139:983	.	1/1:-122.475,-11.4391,0:38:0:38:1416:0	.	.	.
+chr10	21141440	.	AGGGAGGGT	AGGAGGGT	301.70	.	AB=0.416667;ABP=4.45795;AC=14;AF=0.5;AN=24;AO=10;CIGAR=1M1D7M;DP=335;DPB=22.8889;DPRA=0;EPP=3.87889;EPPR=3.63072;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=42;NS=1;NUMALT=1;ODDS=32.0931;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=310;QR=485;RO=14;RPL=2;RPP=10.8276;RPPR=12.937;RPR=8;RUN=1;SAF=8;SAP=10.8276;SAR=2;SF=0,13,14,18,19,20,24,25,26,29,30,35;SRF=11;SRP=12.937;SRR=3;TYPE=del	GT:GL:DP:RO:AO:QA:QR:AD	0/1:-20.2723,0,-35.5792:24:14:10:310:485:14,10	.	.	.	.	.	.	.	.	.	.	.	.	0/1:.,.,-59.7838:44:24:19:658:860	0/1:.,.,-43.9615:25:17:8:283:585	.	.	.	0/1:.,.,-27.313:21:11:10:249:388	0/1:.,.,-17.0338:20:8:12:417:266	0/1:-20.3128,0,-45.1915:27:17:9:320:603:17,9	.	.	.	1/1:-45.2928,-5.11751,0:15:0:15:516:0:0,15	0/1:-40.8148,0,-34.7049:37:15:17:585:512:15,17	0/1:.,.,-45.5468:34:19:14:437:634	.	.	1/1:.,.,0:54:0:52:1722:0	0/1:.,.,-12.7316:17:6:11:333:207	.	.	.	.	0/1:.,.,-22.5296:17:9:8:302:312	.
+chr10	21141469	.	T	C	1439.44	.	AB=0;ABP=0;AC=74;AF=1;AN=74;AO=39;CIGAR=1X;DP=1934;DPB=39;DPRA=0;EPP=9.74743;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=0;NS=1;NUMALT=1;ODDS=58.6707;PAIRED=0.974359;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1436;QR=0;RO=0;RPL=5;RPP=49.8362;RPPR=0;RPR=34;RUN=1;SAF=30;SAP=27.5646;SAR=9;SF=0,1,2,3,4,5,6,7,8,9,10,11,12,13,14,15,16,17,18,19,20,21,22,23,24,25,26,27,28,29,30,31,32,33,34,35,36;SRF=0;SRP=0;SRR=0;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	1/1:-125,-11.7402,0:39:0:39:1436:0:0,39	1/1:-68.3119,-6.92369,0:23:0:23:783:0	1/1:-174.183,-17.4597,0:58:0:58:2009:0	1/1:-151.335,-14.7505,0:49:0:49:1738:0:0,49	1/1:-112.125,-10.8371,0:36:0:36:1289:0	1/1:-181.777,-17.1587,0:57:0:57:2091:0:0,57	1/1:-133.531,-12.9443,0:43:0:43:1532:0:0,43	1/1:-175.488,-16.8577,0:56:0:56:2016:0	1/1:-150.783,-14.4494,0:48:0:48:1731:0	1/1:-142.325,-13.5464,0:46:0:45:1639:0:0,45	1/1:-126.426,-12.3422,0:42:0:41:1451:0:0,41	1/1:-282.836,-28.8989,0:96:0:96:3252:0	1/1:-199.418,-19.868,0:67:0:66:2290:0:0,66	1/1:-251.077,-24.6845,0:82:0:82:2952:0	1/1:-149.376,-14.4494,0:48:0:48:1712:0	1/1:-169.766,-17.1587,0:57:0:57:1945:0	1/1:-140.897,-13.8474,0:48:0:46:1627:0:0,46	1/1:-225.49,-21.3731,0:72:0:71:2596:0	1/1:-119.662,-12.0412,0:40:0:40:1366:0	1/1:-107.946,-10.8371,0:36:0:36:1236:0	1/1:-180.013,-17.1587,0:57:0:57:2074:0:0,57	1/1:-138.926,-13.8474,0:46:0:46:1606:0:0,46	1/1:-148.799,-15.0515,0:50:0:50:1706:0	1/1:-167.225,-14.7583,0:55:1:54:1957:18	1/1:-91.6655,-8.72987,0:29:0:29:1053:0:0,29	1/1:-250.874,-25.2865,0:85:0:84:2949:0:0,84	1/1:-187.438,-18.9649,0:64:0:63:2143:0	1/1:-191.708,-18.6639,0:62:0:62:2199:0:0,62	1/1:-143.259,-13.8474,0:46:0:46:1653:0	1/1:-271.38,-27.9958,0:94:0:93:3129:0	1/1:-106.512,-10.8371,0:36:0:36:1218:0	1/1:-153.255,-15.0515,0:50:0:50:1762:0	1/1:-116.681,-11.1381,0:38:0:37:1353:0	1/1:-156.448,-15.0515,0:50:0:50:1797:0	1/1:-135.634,-13.2453,0:44:0:44:1556:0	1/1:-95.7482,-9.0309,0:30:0:30:1100:0	1/1:-159.721,-16.2556,0:55:0:54:1834:0
+chr10	21158660	.	A	G	221.89	.	AB=0.188811;ABP=123.292;AC=1;AF=0.5;AN=2;AO=27;CIGAR=1X;DP=143;DPB=143;DPRA=0;EPP=9.52472;EPPR=32.9616;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=41.8103;NS=1;NUMALT=1;ODDS=51.0918;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=991;QR=4249;RO=116;RPL=8;RPP=12.7417;RPPR=19.8579;RPR=19;RUN=1;SAF=9;SAP=9.52472;SAR=18;SF=21;SRF=45;SRP=15.6647;SRR=71;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-42.9131,0,-323.807:143:116:27:991:4249:116,27	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr10	21177128	.	G	C	790.45	.	AB=0.57377;ABP=5.89373;AC=1;AF=0.5;AN=2;AO=35;CIGAR=1X;DP=61;DPB=61;DPRA=0;EPP=13.4954;EPPR=15.0369;GTI=0;LEN=1;MEANALT=1;MQM=41.8857;MQMR=42;NS=1;NUMALT=1;ODDS=128.499;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1267;QR=966;RO=26;RPL=30;RPP=41.7866;RPPR=15.0369;RPR=5;RUN=1;SAF=25;SAP=16.9698;SAR=10;SF=36;SRF=20;SRP=19.3799;SRR=6;TYPE=snp	GT:GL:DP:RO:AO:QA:QR	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-91.5347,0,-65.5656:61:26:35:1267:966
+chr10	21177143	.	GAAAAAAAAACAGGAAAAAAATAAATAAATAAACTT	GAAAAAAAAAACAGGAAAAAAATAAATAAATAAACTT,GAAAAAAAAACAGGAAAAAATAAATAAATAAACTT	675.68	.	AB=0;ABP=0;AC=1,2;AF=1;AN=4;AO=43;CIGAR=14M1D21M;DP=81;DPB=49.75;DPRA=0;EPP=45.4803;EPPR=0;GTI=0;LEN=1;MEANALT=9;MQM=42;MQMR=0;NS=1;NUMALT=1;ODDS=71.1473;PAIRED=1;PAIREDR=0;PAO=2.5;PQA=89;PQR=89;PRO=2.5;QA=1583;QR=0;RO=0;RPL=31;RPP=21.2406;RPPR=0;RPR=12;RUN=1;SAF=28;SAP=11.5447;SAR=15;SF=5,6;SRF=0;SRP=0;SRR=0;TYPE=del	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	2/2:-137.371,.,.,-15.9546,.,0:51:0:.,43:.,1583:0:0,43	0/1:.,.,-48.7211,.,.,.:30:18:10,.:301,.:656:18,10	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr10	21177156	.	GAAAAAAATAAATAAATAAACTT	GAAAAAATAAATAAATAAACTT	1142.44	.	AB=0.415385;ABP=7.05258;AC=46;AF=0.5;AN=58;AO=27;CIGAR=1M1D21M;DP=1691;DPB=63.913;DPRA=0;EPP=45.5551;EPPR=25.8679;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=42;NS=1;NUMALT=1;ODDS=101.422;PAIRED=1;PAIREDR=1;PAO=0.5;PQA=18;PQR=18;PRO=0.5;QA=913;QR=1390;RO=38;RPL=23;RPP=32.0437;RPPR=41.6397;RPR=4;RUN=1;SAF=21;SAP=21.1059;SAR=6;SF=0,1,2,4,7,8,9,10,11,12,13,14,15,16,17,19,20,21,22,23,25,27,28,30,31,32,34,35,36;SRF=23;SRP=6.66752;SRR=15;TYPE=del	GT:GL:DP:RO:AO:QA:QR:AD	0/1:-59.5758,0,-101.283:65:38:27:913:1390:38,27	1/1:.,.,0:20:0:20:650:0	1/1:.,.,0:54:0:53:1794:0	.	1/1:.,.,0:45:0:44:1499:0	.	.	1/1:.,.,0:46:0:46:1590:0	1/1:.,.,0:50:0:49:1737:0	1/1:-108.34,-10.5361,0:36:0:35:1246:0:0,35	1/1:-131.78,-17.1587,0:46:0:45:1514:0:0,45	1/1:.,.,0:80:0:78:2668:0	0/1:-64.7655,0,-80.0613:59:31:26:957:1127:31,26	0/1:.,.,-123.274:108:51:55:1777:1811	0/1:.,.,-26.7402:45:13:30:1032:474	1/1:.,.,0:57:0:53:1828:0	0/1:-58.6966,0,-51.8311:50:21:24:842:775:21,24	0/1:.,.,-67.003:63:28:33:1222:987	.	0/1:.,.,-68.5372:62:28:32:1121:998	0/1:-48.4597,0,-68.8211:51:26:21:740:975:26,21	1/1:-127.259,-12.8284,0:50:1:44:1486:28:1,44	1/1:.,.,0:61:1:58:1929:27	0/1:.,.,-102.354:72:39:31:1097:1439	.	0/1:-125.274,0,-114.926:102:46:53:1816:1698:46,53	.	1/1:-259.615,-33.1133,0:92:0:90:2977:0:0,90	1/1:.,.,0:58:0:58:1969:0	.	0/1:.,.,-31.2968:54:16:37:1222:559	1/1:.,.,0:59:1:57:1971:38	1/1:.,.,0:54:0:53:1813:0	.	1/1:.,.,0:55:1:54:1912:29	0/1:.,.,-45.3814:41:18:23:748:667	1/1:.,.,0:56:0:55:1875:0
+chr10	21178889	.	G	T	876.24	.	AB=0.447059;ABP=5.07959;AC=1;AF=0.5;AN=2;AO=38;CIGAR=1X;DP=85;DPB=85;DPRA=0;EPP=21.525;EPPR=47.41;GTI=0;LEN=1;MEANALT=1;MQM=41.8421;MQMR=42;NS=1;NUMALT=1;ODDS=201.761;PAIRED=1;PAIREDR=0.978723;PAO=0;PQA=0;PQR=0;PRO=0;QA=1427;QR=1808;RO=47;RPL=24;RPP=8.7247;RPPR=27.4509;RPR=14;RUN=1;SAF=28;SAP=21.525;SAR=10;SF=0;SRF=35;SRP=27.4509;SRR=12;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	0/1:-97.8754,0,-130.646:85:47:38:1427:1808:47,38	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr10	21462711	.	C	T	10.53	.	AB=0.666667;ABP=3.73412;AC=1;AF=0.5;AN=2;AO=2;CIGAR=1X;DP=3;DPB=3;DPRA=0;EPP=7.35324;EPPR=5.18177;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=42;NS=1;NUMALT=1;ODDS=1.33013;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=53;QR=38;RO=1;RPL=1;RPP=3.0103;RPPR=5.18177;RPR=1;RUN=1;SAF=1;SAP=3.0103;SAR=1;SF=29;SRF=0;SRP=5.18177;SRR=1;TYPE=snp	GT:GL:DP:RO:AO:QA:QR	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-3.96369,0,-2.75139:3:1:2:53:38	.	.	.	.	.	.	.
+chr10	67726514	.	A	C	1476.05	.	AB=0.354167;ABP=11.8771;AC=22;AF=0.5;AN=42;AO=17;CIGAR=1X;DP=2473;DPB=48;DPRA=0;EPP=3.13803;EPPR=3.08035;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=42;NS=1;NUMALT=1;ODDS=79.5959;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=648;QR=1186;RO=31;RPL=13;RPP=13.3567;RPPR=11.486;RPR=4;RUN=1;SAF=6;SAP=6.20364;SAR=11;SF=1,2,3,5,7,8,9,10,11,13,14,16,19,21,23,24,25,26,31,33,34;SRF=14;SRP=3.64073;SRR=17;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	0/1:-41.8873,0,-88.2304:48:31:17:648:1186	0/1:-142.967,0,-146.087:109:55:54:2032:2066	0/1:-84.6422,0,-127.167:78:45:33:1251:1747:45,33	.	0/1:-179.305,0,-224.989:151:83:68:2606:3134:83,68	.	0/1:-198.729,0,-201.373:154:77:77:2830:2879	0/1:-133.595,0,-93.2305:86:36:50:1843:1393	0/1:-130.665,0,-77.9465:80:32:48:1788:1222:32,48	1/1:-368.298,-32.3185,0:113:1:112:4303:17:1,112	0/1:-220.759,0,-258.695:183:97:86:3190:3646	.	0/1:-290.894,0,-268.062:212:101:111:4117:3847	0/1:-72.0537,0,-117.194:70:42:28:1076:1614	.	0/1:-169.168,0,-122.706:108:47:61:2338:1795:47,61	.	.	0/1:-125.723,0,-180.027:114:64:50:1848:2489	.	0/1:-29.2144,0,-215.729:91:74:17:652:2813:74,17	.	0/1:-148.913,0,-197.955:131:74:57:2197:2784	0/1:-130.926,0,-100.701:87:39:48:1817:1464:39,48	0/1:-311.313,0,-284.863:227:108:119:4420:4116:108,119	0/1:-161.2,0,-186.085:138:71:67:2334:2645	.	.	.	.	0/1:-118.232,0,-174.078:110:63:47:1746:2400	.	0/1:-85.2254,0,-93.1418:67:34:33:1215:1311	0/1:-147.762,0,-164.069:116:60:56:2125:2308	.	.
+chr10	68040240	.	G	T	856.02	.	AB=0.458824;ABP=4.26209;AC=2;AF=0.5;AN=4;AO=39;CIGAR=1X;DP=148;DPB=85;DPRA=0;EPP=5.73856;EPPR=6.03148;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=42;NS=1;NUMALT=1;ODDS=221.012;PAIRED=1;PAIREDR=0.978261;PAO=0;PQA=0;PQR=0;PRO=0;QA=1492;QR=1704;RO=46;RPL=17;RPP=4.40227;RPPR=15.095;RPR=22;RUN=1;SAF=27;SAP=15.538;SAR=12;SF=10,31;SRF=30;SRP=12.2627;SRR=16;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	0/1:-103.516,0,-122.141:85:46:39:1492:1704:46,39	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-82.7486,0,-84.7453:63:32:31:1172:1196	.	.	.	.	.
+chr10	68040325	.	C	T	1700.72	.	AB=0;ABP=0;AC=30;AF=1;AN=50;AO=65;CIGAR=1X;DP=2652;DPB=65;DPRA=0;EPP=5.71629;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=41.9077;MQMR=0;NS=1;NUMALT=1;ODDS=94.7143;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=2414;QR=0;RO=0;RPL=35;RPP=3.84548;RPPR=0;RPR=30;RUN=1;SAF=34;SAP=3.31097;SAR=31;SF=0,2,4,5,6,7,8,10,12,13,14,19,20,21,23,25,27,28,29,30,31,32,33,35,36;SRF=0;SRP=0;SRR=0;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	1/1:-209.173,-19.567,0:65:0:65:2414:0:0,65	.	0/1:-140.389,0,-173.596:120:65:55:2038:2419	.	0/1:-98.408,0,-65.8484:64:26:38:1383:979	0/1:-148.339,0,-189.171:127:70:57:2154:2632:70,57	0/1:-76.4388,0,-94.5282:65:36:29:1107:1312:36,29	0/1:-91.8185,0,-167.712:104:64:40:1417:2317	1/1:-226.527,-21.6742,0:72:0:72:2666:0	.	0/1:-121.666,0,-151.102:106:57:49:1769:2113:57,49	.	0/1:-235.021,0,-203.969:169:80:89:3353:2940:80,89	1/1:-482.286,-45.1545,0:150:0:150:5596:0	0/1:-86.9405,0,-99.8049:70:37:33:1249:1393	.	.	.	.	0/1:-154.998,0,-80.1076:89:33:56:2115:1232	0/1:-169.182,0,-149.023:120:57:63:2379:2138:57,63	0/1:-36.0878,0,-180.102:85:65:20:706:2366:65,20	.	0/1:-99.4924,0,-149.898:93:54:39:1473:2059	.	0/1:-254.99,0,-254.722:197:99:98:3633:3624:99,98	.	1/1:-488.966,-43.3585,0:157:1:154:5683:38:1,154	0/1:-92.1558,0,-135.005:87:51:36:1365:1855	0/1:-257.229,0,-221.603:184:87:97:3629:3192	0/1:-111.489,0,-107.208:84:41:42:1577:1526	0/1:-110.151,0,-130.465:93:50:43:1591:1824	0/1:-111.487,0,-152.691:103:59:44:1646:2155	0/1:-87.7023,0,-74.8278:61:29:32:1224:1071	.	0/1:-87.175,0,-48.1928:50:19:31:1179:729	1/1:-433.113,-37.5866,0:137:1:136:5043:38
+chr10	68280453	.	T	A	2361.85	.	AB=0.604027;ABP=17.0156;AC=1;AF=0.5;AN=2;AO=90;CIGAR=1X;DP=149;DPB=149;DPRA=0;EPP=4.55446;EPPR=4.81373;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=42;NS=1;NUMALT=1;ODDS=306.385;PAIRED=1;PAIREDR=0.966102;PAO=0;PQA=0;PQR=0;PRO=0;QA=3337;QR=2162;RO=59;RPL=37;RPP=9.18693;RPPR=26.0132;RPR=53;RUN=1;SAF=46;SAP=3.10681;SAR=44;SF=7;SRF=32;SRP=3.93042;SRR=27;TYPE=snp	GT:GL:DP:RO:AO:QA:QR	.	.	.	.	.	.	.	0/1:-244.777,0,-143.204:149:59:90:3337:2162	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr10	68979348	.	T	C	1127.85	.	AB=0.566265;ABP=6.17594;AC=1;AF=0.5;AN=2;AO=47;CIGAR=1X;DP=83;DPB=83;DPRA=0;EPP=13.4056;EPPR=11.6962;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=41.9444;NS=1;NUMALT=1;ODDS=181.858;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1754;QR=1366;RO=36;RPL=10;RPP=36.6912;RPPR=37.7539;RPR=37;RUN=1;SAF=37;SAP=36.6912;SAR=10;SF=14;SRF=30;SRP=37.7539;SRR=6;TYPE=snp	GT:GL:DP:RO:AO:QA:QR	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-126.998,0,-93.1871:83:36:47:1754:1366	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
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+chr10	69299372	.	T	G	2309.57	.	AB=0.473868;ABP=4.71267;AC=2;AF=0.5;AN=4;AO=136;CIGAR=1X;DP=404;DPB=287;DPRA=0;EPP=9.39698;EPPR=13.4938;GTI=0;LEN=1;MEANALT=1;MQM=41.7132;MQMR=41.5828;NS=1;NUMALT=1;ODDS=788.791;PAIRED=0.992647;PAIREDR=0.980132;PAO=0;PQA=0;PQR=0;PRO=0;QA=5047;QR=5585;RO=151;RPL=66;RPP=3.26577;RPPR=24.8832;RPR=70;RUN=1;SAF=72;SAP=4.03217;SAR=64;SF=25,30;SRF=75;SRP=3.02468;SRR=76;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-350.325,0,-393.371:287:151:136:5047:5585:151,136	.	.	.	.	0/1:-126.051,0,-178.61:117:67:50:1858:2471	.	.	.	.	.	.
+chr10	69299446	.	T	A	1080.05	.	AB=0.359223;ABP=20.7405;AC=6;AF=0.5;AN=12;AO=37;CIGAR=1X;DP=595;DPB=103;DPRA=0;EPP=24.1968;EPPR=18.9344;GTI=0;LEN=1;MEANALT=1;MQM=41.4865;MQMR=42;NS=1;NUMALT=1;ODDS=180.633;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1385;QR=2482;RO=66;RPL=22;RPP=5.88603;RPPR=61.0478;RPR=15;RUN=1;SAF=13;SAP=10.1116;SAR=24;SF=4,13,14,25,30,35;SRF=32;SRP=3.1419;SRR=34;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	0/1:-89.129,0,-183.658:103:66:37:1385:2482	.	.	.	.	.	.	.	.	0/1:-144.265,0,-125.631:103:48:55:2025:1824	0/1:-73.1256,0,-85.8998:62:32:30:1054:1204	.	.	.	.	.	.	.	.	.	.	0/1:-240.395,0,-312.077:210:115:95:3498:4359:115,95	.	.	.	.	0/1:-73.336,0,-78.7786:59:30:29:1046:1111	.	.	.	.	0/1:-95.0585,0,-59.4068:58:23:35:1309:888	.
+chr10	69366602	.	T	C	3265.53	.	AB=0.538745;ABP=6.54395;AC=20;AF=0.5;AN=38;AO=146;CIGAR=1X;DP=5150;DPB=271;DPRA=0;EPP=20.2036;EPPR=12.3494;GTI=0;LEN=1;MEANALT=2;MQM=41.863;MQMR=41.9837;NS=1;NUMALT=1;ODDS=660.609;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=5288;QR=4452;RO=123;RPL=44;RPP=53.0434;RPPR=32.6871;RPR=102;RUN=1;SAF=112;SAP=93.4982;SAR=34;SF=2,5,8,9,10,11,13,14,18,19,21,22,25,27,28,30,31,34,35;SRF=94;SRP=77.5995;SRR=29;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	0/1:-378.511,0,-305.783:271:123:146:5288:4452	.	.	0/1:-395.898,0,-363.625:299:144:155:5592:5222:144,155	.	.	0/1:-340.671,0,-253.642:235:103:131:4738:3748	1/1:-684.306,-64.7215,0:216:0:215:7884:0:0,215	0/1:-348.236,0,-319.991:265:127:138:4923:4608:127,138	0/1:-447.233,0,-549.641:401:214:187:6537:7713	.	0/1:-449.448,0,-534.731:389:207:182:6518:7534	0/1:-277.715,0,-276.002:218:108:110:3945:3935	.	.	.	0/1:-259.58,0,-275.993:209:106:102:3712:3899	0/1:-379.573,0,-388.827:305:154:149:5432:5547	.	0/1:-83.0192,0,-357.296:180:134:46:1568:4730:134,46	0/1:-250.143,0,-267.835:209:106:103:3590:3798	.	.	0/1:-472.78,0,-633.762:445:248:197:6972:8829:248,197	.	0/1:-573.211,0,-456.06:413:186:227:8132:6685:186,227	0/1:-239.084,0,-368.038:243:142:101:3594:5081	.	0/1:-255.29,0,-239.252:193:94:99:3618:3426	0/1:-272.641,0,-306.878:238:126:112:3953:4350	.	.	0/1:-336.901,0,-340.691:262:133:129:4794:4827	0/1:-193.925,0,-208.153:159:81:78:2779:2945	.
+chr10	69881254	.	A	G	3440.86	.	AB=0.513725;ABP=3.42756;AC=1;AF=0.5;AN=2;AO=131;CIGAR=1X;DP=255;DPB=255;DPRA=0;EPP=3.82253;EPPR=3.29049;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=41.6935;NS=1;NUMALT=1;ODDS=727.212;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=5008;QR=4655;RO=124;RPL=89;RPP=39.627;RPPR=3.08035;RPR=42;RUN=1;SAF=76;SAP=10.3204;SAR=55;SF=23;SRF=77;SRP=18.771;SRR=47;TYPE=snp	GT:GL:DP:RO:AO:QA:QR	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-355.426,0,-324.218:255:124:131:5008:4655	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr10	69905300	.	G	A	1370.27	.	AB=0.532787;ABP=4.14943;AC=10;AF=0.5;AN=20;AO=65;CIGAR=1X;DP=1131;DPB=122;DPRA=0;EPP=5.71629;EPPR=7.61992;GTI=0;LEN=1;MEANALT=1;MQM=41.7231;MQMR=42;NS=1;NUMALT=1;ODDS=318.695;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2427;QR=2113;RO=57;RPL=36;RPP=4.64726;RPPR=3.35316;RPR=29;RUN=1;SAF=21;SAP=20.6827;SAR=44;SF=0,1,4,8,13,14,17,20,21,23;SRF=20;SRP=14.02;SRR=37;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	0/1:-172.374,0,-146.184:122:57:65:2427:2113:57,65	0/1:-88.4373,0,-90.253:68:34:34:1256:1278	.	.	0/1:-208.661,0,-107.642:120:44:76:2838:1661	.	.	.	0/1:-93.3287,0,-134.041:87:49:38:1388:1868	.	.	.	.	0/1:-223.692,0,-252.404:183:94:89:3232:3588	0/1:-131.264,0,-148.097:103:54:49:1876:2072	.	.	0/1:-131.582,0,-164.396:112:60:52:1909:2294	.	.	0/1:-139.667,0,-142.57:105:53:52:1982:2029:53,52	0/1:-71.425,0,-169.77:91:61:30:1139:2291:61,30	.	0/1:-187.584,0,-177.1:140:68:71:2652:2551	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr10	69908113	.	C	T	1074.04	.	AB=0.410714;ABP=10.7656;AC=1;AF=0.5;AN=2;AO=46;CIGAR=1X;DP=112;DPB=112;DPRA=0;EPP=12.2627;EPPR=9.45891;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=41.9697;NS=1;NUMALT=1;ODDS=247.307;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1725;QR=2430;RO=66;RPL=24;RPP=3.19912;RPPR=3.1419;RPR=22;RUN=1;SAF=28;SAP=7.73089;SAR=18;SF=8;SRF=38;SRP=6.30041;SRR=28;TYPE=snp	GT:GL:DP:RO:AO:QA:QR	.	.	.	.	.	.	.	.	0/1:-115.499,0,-176.621:112:66:46:1725:2430	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr10	69908157	.	T	C	3584.74	.	AB=0.505415;ABP=3.08085;AC=3;AF=0.5;AN=6;AO=140;CIGAR=1X;DP=772;DPB=277;DPRA=0;EPP=4.00297;EPPR=12.9167;GTI=0;LEN=1;MEANALT=1;MQM=41.7357;MQMR=41.4891;NS=1;NUMALT=1;ODDS=785.441;PAIRED=1;PAIREDR=0.992701;PAO=0;PQA=0;PQR=0;PRO=0;QA=5151;QR=5023;RO=137;RPL=81;RPP=10.5174;RPPR=3.02615;RPR=59;RUN=1;SAF=61;SAP=8.03571;SAR=79;SF=13,17,20;SRF=69;SRP=3.02615;SRR=68;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-361.829,0,-348.933:277:137:140:5151:5023	.	.	.	0/1:-338.428,0,-236.658:219:95:124:4674:3492	.	.	0/1:-400.513,0,-317.764:276:126:150:5605:4633:126,150	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr10	69908241	.	G	A	1796.27	.	AB=0.508671;ABP=3.12327;AC=7;AF=0.5;AN=14;AO=88;CIGAR=1X;DP=1109;DPB=173;DPRA=0;EPP=4.58955;EPPR=8.75832;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=41.9529;NS=1;NUMALT=1;ODDS=472.301;PAIRED=0.977273;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3235;QR=3133;RO=85;RPL=65;RPP=46.5385;RPPR=74.7711;RPR=23;RUN=1;SAF=39;SAP=5.47788;SAR=49;SF=0,1,4,8,14,21,23;SRF=40;SRP=3.64897;SRR=45;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	0/1:-228.109,0,-219.801:173:85:88:3235:3133:85,88	0/1:-99.3311,0,-117.542:81:43:38:1441:1638	.	.	0/1:-315.289,0,-290.13:233:112:120:4502:4157	.	.	.	0/1:-235.63,0,-220.419:174:83:90:3334:3149	.	.	.	.	.	0/1:-172.821,0,-201.733:145:77:68:2502:2834	.	.	.	.	.	.	0/1:-51.615,0,-192.102:94:70:24:923:2537:70,24	.	0/1:-240.74,0,-310.15:209:115:94:3515:4309	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr10	69909802	.	G	A	1518.95	.	AB=0.45283;ABP=5.05886;AC=5;AF=0.5;AN=10;AO=48;CIGAR=1X;DP=642;DPB=106;DPRA=0;EPP=5.9056;EPPR=3.0103;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=41.9655;NS=1;NUMALT=1;ODDS=270.785;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1823;QR=2152;RO=58;RPL=15;RPP=17.6677;RPPR=8.40154;RPR=33;RUN=1;SAF=29;SAP=7.5342;SAR=19;SF=8,10,13,20,24;SRF=36;SRP=10.3484;SRR=22;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	0/1:-125.939,0,-154.653:106:58:48:1823:2152	.	0/1:-122.078,0,-169.746:112:64:48:1800:2360:64,48	.	.	0/1:-243.472,0,-252.519:193:97:96:3494:3593	.	.	.	.	.	.	0/1:-207.105,0,-189.362:152:73:78:2920:2723:73,78	.	.	.	0/1:-103.129,0,-105.926:79:40:39:1460:1493:40,39	.	.	.	.	.	.	.	.	.	.	.	.
+chr10	69909844	.	C	A	2301.81	.	AB=0.497297;ABP=3.02204;AC=1;AF=0.5;AN=2;AO=92;CIGAR=1X;DP=185;DPB=185;DPRA=0;EPP=16.6056;EPPR=5.83555;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=42;NS=1;NUMALT=1;ODDS=530.011;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3409;QR=3510;RO=93;RPL=48;RPP=3.38795;RPPR=17.6035;RPR=44;RUN=1;SAF=34;SAP=16.6056;SAR=58;SF=30;SRF=39;SRP=8.26386;SRR=54;TYPE=snp	GT:GL:DP:RO:AO:QA:QR	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-239.415,0,-247.753:185:93:92:3409:3510	.	.	.	.	.	.
+chr10	69909899	.	G	A	1635.80	.	AB=0.504854;ABP=3.03138;AC=5;AF=0.5;AN=10;AO=52;CIGAR=1X;DP=704;DPB=103;DPRA=0;EPP=45.7716;EPPR=25.534;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=41.9608;NS=1;NUMALT=1;ODDS=285.677;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1998;QR=1908;RO=51;RPL=27;RPP=3.17734;RPPR=8.16222;RPR=25;RUN=1;SAF=21;SAP=7.18621;SAR=31;SF=8,10,13,20,24;SRF=17;SRP=15.3153;SRR=34;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	0/1:-141.598,0,-134.063:103:51:52:1998:1908	.	0/1:-150.716,0,-154.823:118:59:58:2147:2211:59,58	.	.	0/1:-309.315,0,-286.95:230:111:119:4383:4113	.	.	.	.	.	.	0/1:-214.462,0,-216.378:165:81:84:3078:3095:81,84	.	.	.	0/1:-69.3632,0,-156.504:88:57:30:1102:2112:57,30	.	.	.	.	.	.	.	.	.	.	.	.
+chr10	69926097	.	T	C	976.38	.	AB=0.511628;ABP=3.0608;AC=43;AF=0.5;AN=62;AO=22;CIGAR=1X;DP=1769;DPB=43;DPRA=0;EPP=9.32731;EPPR=8.07707;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=40.0952;NS=1;NUMALT=1;ODDS=98.3478;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=771;QR=749;RO=21;RPL=8;RPP=6.56362;RPPR=5.59539;RPR=14;RUN=1;SAF=19;SAP=28.2783;SAR=3;SF=0,1,2,3,4,5,6,7,8,9,10,11,12,13,14,15,16,17,18,19,20,23,24,25,26,28,29,30,32,34,35;SRF=18;SRP=26.2761;SRR=3;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	0/1:-54.4507,0,-51.1012:43:21:22:771:749:21,22	0/1:-29.2796,0,-32.1938:24:12:12:415:451	0/1:-79.3524,0,-96.4223:72:38:33:1170:1367	0/1:-47.9764,0,-94.4009:58:35:23:792:1287:35,23	1/1:-203.706,-19.2659,0:65:0:64:2363:0	1/1:-223.063,-21.6742,0:72:0:72:2563:0:0,72	1/1:-133.656,-12.6433,0:42:0:42:1536:0:0,42	0/1:-69.8241,0,-98.2711:66:38:28:1031:1355	1/1:-119.522,-11.4391,0:38:0:38:1401:0	0/1:-65.8466,0,-68.7735:51:26:25:935:965:26,25	0/1:-78.2919,0,-46.8744:49:19:30:1071:707:19,30	0/1:-63.3196,0,-123.102:73:45:28:987:1689	1/1:-285.854,-27.0927,0:90:0:90:3305:0:0,90	1/1:-247.177,-23.4803,0:78:0:78:2846:0	1/1:-137.428,-12.9443,0:43:0:43:1584:0	0/1:-76.0592,0,-80.1774:61:31:30:1091:1145	1/1:-208.687,-19.567,0:65:0:65:2404:0:0,65	0/1:-53.5016,0,-93.2005:57:34:23:808:1273	1/1:-103.305,-9.93399,0:33:0:33:1188:0	0/1:-89.5074,0,-83.7521:70:33:36:1284:1208	0/1:-91.0399,0,-108.971:78:42:36:1343:1524:42,36	.	.	1/1:-175.71,-16.8577,0:56:0:56:2022:0	0/1:-23.1523,0,-38.4429:23:14:9:344:518:14,9	1/1:-239.853,-23.7814,0:79:0:79:2769:0:0,79	0/1:-126.874,0,-138.261:107:54:53:1878:1959	.	0/1:-56.8736,0,-47.505:40:18:22:790:685	0/1:-80.4509,0,-143.778:90:54:35:1241:1965	0/1:-73.5544,0,-9.30339:33:7:26:962:217	.	0/1:-77.6877,0,-47.2662:48:19:29:1074:708	.	0/1:-25.3814,0,-84.151:44:31:13:440:1118	1/1:-65.599,-6.32163,0:21:0:21:751:0	.
+chr10	69926319	.	C	A	3373.50	.	AB=0.405904;ABP=23.8516;AC=11;AF=0.5;AN=20;AO=110;CIGAR=1X;DP=2692;DPB=271;DPRA=0;EPP=3.08926;EPPR=14.3532;GTI=0;LEN=1;MEANALT=1;MQM=41.5273;MQMR=41.9752;NS=1;NUMALT=1;ODDS=606.032;PAIRED=1;PAIREDR=0.987578;PAO=0;PQA=0;PQR=0;PRO=0;QA=4122;QR=5869;RO=161;RPL=54;RPP=3.08926;RPPR=40.8964;RPR=56;RUN=1;SAF=56;SAP=3.08926;SAR=54;SF=0,1,2,4,8,14,21,23,25,28;SRF=89;SRP=6.90816;SRR=72;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	0/1:-271.983,0,-428.477:271:161:110:4122:5869:161,110	0/1:-155.664,0,-203.476:139:78:61:2288:2820	0/1:-451.221,0,-358.549:319:148:170:6360:5221	.	0/1:-402.471,0,-491.19:349:189:160:5920:6870	.	.	.	1/1:-669.168,-57.7969,0:214:2:212:7861:72	.	.	.	.	.	0/1:-297.108,0,-344.638:248:132:115:4326:4826	.	.	.	.	.	.	0/1:-39.7473,0,-326.517:146:120:26:962:4254:120,26	.	0/1:-400.954,0,-488.406:343:187:156:5870:6814	.	0/1:-490.702,0,-651.349:443:249:194:7292:9051:249,194	.	.	0/1:-281.038,0,-281.474:220:110:110:4027:4002	.	.	.	.	.	.	.	.
+chr10	69926325	.	C	T	3230.58	.	AB=0.408907;ABP=20.8129;AC=13;AF=0.5;AN=24;AO=101;CIGAR=1X;DP=3068;DPB=247;DPRA=0;EPP=3.54779;EPPR=5.92543;GTI=0;LEN=1;MEANALT=1;MQM=41.4851;MQMR=41.9726;NS=1;NUMALT=1;ODDS=560.056;PAIRED=1;PAIREDR=0.986301;PAO=0;PQA=0;PQR=0;PRO=0;QA=3806;QR=5402;RO=146;RPL=49;RPP=3.2038;RPPR=37.2779;RPR=52;RUN=1;SAF=53;SAP=3.54779;SAR=48;SF=0,1,2,4,8,13,14,20,21,23,25,28;SRF=87;SRP=14.6708;SRR=59;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	0/1:-251.737,0,-393.76:247:146:101:3806:5402:146,101	0/1:-147.424,0,-184.023:126:69:57:2151:2555	0/1:-428.261,0,-324.63:292:130:160:6001:4745	.	0/1:-360.798,0,-450.152:314:170:144:5302:6286	.	.	.	1/1:-612.366,-57.4967,0:191:0:191:7128:0	.	.	.	.	0/1:-457.494,0,-345.647:306:138:168:6363:5044	0/1:-271.653,0,-321.401:230:123:107:3989:4501	.	.	.	.	.	0/1:-336.582,0,-510.775:324:190:134:5029:7022:190,134	0/1:-38.5587,0,-298.087:135:110:25:911:3890:110,25	.	0/1:-369.703,0,-446.75:309:168:141:5393:6232	.	0/1:-452,0,-554.381:392:213:178:6667:7757:213,178	.	.	0/1:-254.408,0,-253.153:202:99:103:3651:3619	.	.	.	.	.	.	.	.
+chr10	69926334	.	C	G	4673.23	.	AB=0.514403;ABP=3.44817;AC=31;AF=0.5;AN=50;AO=125;CIGAR=1X;DP=6994;DPB=243;DPRA=0;EPP=3.02767;EPPR=8.97265;GTI=0;LEN=1;MEANALT=1;MQM=41.08;MQMR=41.9831;NS=1;NUMALT=1;ODDS=698.033;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=4610;QR=4448;RO=118;RPL=59;RPP=3.86152;RPPR=7.72129;RPR=66;RUN=1;SAF=66;SAP=3.86152;SAR=59;SF=3,4,5,6,7,9,10,11,12,13,14,15,16,17,18,19,23,24,25,26,29,30,32,34,35;SRF=63;SRP=4.18805;SRR=55;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	0/1:-321.225,0,-311.07:243:118:125:4610:4448:118,125	0/1:-444.392,0,-354.296:308:142:166:6218:5241	1/1:-1172.35,-108.477,0:365:1:364:13636:14:1,364	1/1:-607.719,-56.0991,0:192:1:191:7048:17:1,191	0/1:-450.05,0,-453.074:342:173:169:6406:6433	.	0/1:-302.259,0,-323.312:235:121:114:4317:4580:121,114	0/1:-405.228,0,-398.345:304:150:154:5780:5674:150,154	0/1:-340.551,0,-497.908:329:188:140:5077:6904	1/1:-1375.7,-128.841,0:429:0:428:15998:0:0,428	0/1:-328.795,0,-447.157:295:165:129:4827:6201	0/1:-313.333,0,-270.999:220:104:116:4393:3958	0/1:-366.837,0,-414.168:302:158:144:5347:5882	1/1:-861.881,-80.676,0:269:0:268:10062:0:0,268	0/1:-365.112,0,-546.977:350:203:147:5485:7572	1/1:-477.08,-44.2514,0:147:0:147:5522:0	0/1:-439.83,0,-421.421:328:161:165:6263:6031	.	.	.	0/1:-439.94,0,-346.525:298:134:163:6130:5079	0/1:-162.59,0,-158.856:123:60:62:2305:2265:60,62	0/1:-546.6,0,-434.65:375:172:203:7631:6384:172,203	0/1:-405.083,0,-370.64:315:151:163:5778:5440	.	.	0/1:-460.705,0,-483.511:374:190:182:6634:6894	0/1:-292.052,0,-279.059:219:106:112:4137:3986	.	0/1:-284.304,0,-388.293:258:145:113:4190:5396	.	0/1:-258.497,0,-345.055:227:127:100:3778:4782	1/1:-475.109,-44.2514,0:147:0:147:5499:0	.
+chr10	69933921	.	G	A	5378.53	.	AB=0.516234;ABP=3.71532;AC=31;AF=0.5;AN=50;AO=159;CIGAR=1X;DP=8026;DPB=308;DPRA=0;EPP=14.4959;EPPR=28.8919;GTI=0;LEN=1;MEANALT=2;MQM=41.4088;MQMR=41.1689;NS=1;NUMALT=1;ODDS=830.561;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=6021;QR=5512;RO=148;RPL=111;RPP=57.2152;RPPR=39.6906;RPR=48;RUN=1;SAF=88;SAP=6.95719;SAR=71;SF=3,4,5,6,7,9,10,11,12,13,14,15,16,17,18,19,23,24,25,26,29,30,32,34,35;SRF=86;SRP=11.4614;SRR=62;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	0/1:-422.512,0,-374.851:308:148:159:6021:5512:148,159	0/1:-458.146,0,-460.159:352:178:174:6539:6591	1/1:-1246.51,-113.997,0:384:1:383:14520:16:1,383	1/1:-754.592,-69.839,0:232:0:232:8739:0:0,232	0/1:-466.175,0,-565.645:399:213:182:6805:7920	.	0/1:-351.875,0,-325.315:259:124:134:4964:4681:124,134	0/1:-365.888,0,-417.359:299:156:142:5300:5873:156,142	0/1:-549.836,0,-539.363:424:209:214:7876:7743	1/1:-1412.09,-130.045,0:432:0:432:16375:0:0,432	0/1:-463.991,0,-439.491:347:168:179:6642:6291	0/1:-309.631,0,-395.724:268:146:122:4524:5513	0/1:-427.522,0,-430.888:323:163:160:6083:6141	1/1:-1109.35,-103.855,0:345:0:345:12995:0:0,345	0/1:-469.282,0,-481.868:361:182:178:6713:6849	1/1:-635.609,-58.3998,0:194:0:194:7366:0	0/1:-469.626,0,-326.718:299:128:171:6502:4841	.	.	.	0/1:-447.965,0,-645.086:422:243:179:6676:8980	0/1:-188.268,0,-108.17:112:44:68:2583:1637:44,68	0/1:-660.094,0,-573.791:484:229:254:9383:8367:229,254	0/1:-440.659,0,-476.723:365:188:177:6437:6815	.	.	0/1:-584.653,0,-528.809:444:214:227:8374:7688	0/1:-317.938,0,-358.004:262:137:123:4589:5046	.	0/1:-400.835,0,-315.009:280:128:152:5622:4647	.	0/1:-298.034,0,-403.499:265:149:116:4447:5615	1/1:-536.782,-49.971,0:166:0:166:6230:0	.
+chr10	69933969	.	G	A	4318.26	.	AB=0.541176;ABP=6.76567;AC=31;AF=0.5;AN=50;AO=138;CIGAR=1X;DP=6536;DPB=255;DPRA=0;EPP=21.2003;EPPR=25.7458;GTI=0;LEN=1;MEANALT=1;MQM=41.413;MQMR=40.6581;NS=1;NUMALT=1;ODDS=621.598;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=4940;QR=4260;RO=117;RPL=93;RPP=39.2644;RPPR=47.5719;RPR=45;RUN=1;SAF=67;SAP=3.26206;SAR=71;SF=3,4,5,6,7,9,10,11,12,13,14,15,16,17,18,19,23,24,25,26,29,30,32,34,35;SRF=60;SRP=3.17734;SRR=57;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	0/1:-347.744,0,-283.892:255:117:138:4940:4260:117,138	0/1:-366.388,0,-314.845:263:123:140:5166:4582	1/1:-916.122,-86.0946,0:286:0:286:10629:0:0,286	1/1:-561.226,-54.1854,0:181:0:180:6493:0:0,180	0/1:-415.59,0,-403.049:319:155:164:5984:5770	.	0/1:-287.191,0,-239.752:206:95:111:4037:3497:95,111	0/1:-304.487,0,-325.977:247:125:121:4393:4625:125,121	0/1:-459.555,0,-458.813:365:180:183:6599:6565	1/1:-1164.24,-108.973,0:362:0:362:13491:0:0,362	0/1:-390.362,0,-379.268:300:145:154:5576:5444	0/1:-272.503,0,-332.835:230:123:107:3945:4657	0/1:-290.82,0,-346.923:245:130:115:4213:4884	1/1:-810.88,-76.4616,0:255:0:254:9458:0:0,254	0/1:-385.913,0,-323.941:279:130:148:5447:4738	1/1:-499.931,-47.2617,0:157:0:157:5774:0	0/1:-359.203,0,-273.28:241:105:136:5011:4001	.	.	.	0/1:-365.766,0,-514.158:336:193:143:5424:7155	0/1:-165.914,0,-64.4303:90:29:61:2241:1053:29,61	0/1:-552.301,0,-549.95:431:215:216:7937:7874:215,216	0/1:-366.957,0,-405.102:310:159:151:5417:5767	.	.	0/1:-513.729,0,-427.736:379:175:204:7307:6353	0/1:-273.042,0,-304.228:222:115:106:3942:4296	.	0/1:-343.233,0,-272.225:236:106:130:4800:3976	.	0/1:-240.935,0,-275.03:201:104:96:3530:3909	1/1:-440.133,-42.1442,0:140:0:140:5080:0	.
+chr10	69934012	.	C	A	2908.74	.	AB=0.504032;ABP=3.04532;AC=2;AF=0.5;AN=4;AO=125;CIGAR=1X;DP=471;DPB=248;DPRA=0;EPP=4.41741;EPPR=3.02795;GTI=0;LEN=1;MEANALT=1;MQM=41.552;MQMR=41.4959;NS=1;NUMALT=1;ODDS=667.25;PAIRED=1;PAIREDR=0.99187;PAO=0;PQA=0;PQR=0;PRO=0;QA=4343;QR=4312;RO=123;RPL=57;RPP=5.11229;RPPR=17.8575;RPR=68;RUN=1;SAF=48;SAP=17.62;SAR=77;SF=13,20;SRF=44;SRP=24.6368;SRR=79;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-303.447,0,-300.177:248:123:125:4343:4312	.	.	.	.	.	.	0/1:-295.175,0,-263.349:223:105:118:4183:3814:105,118	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr10	69934258	.	C	G	6781.87	.	AB=0.443299;ABP=8.42779;AC=37;AF=0.5;AN=58;AO=86;CIGAR=1X;DP=11796;DPB=194;DPRA=0;EPP=15.2311;EPPR=4.2971;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=41.6574;NS=1;NUMALT=1;ODDS=477.36;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=3152;QR=3959;RO=108;RPL=43;RPP=3.0103;RPPR=26.2531;RPR=43;RUN=1;SAF=47;SAP=4.62628;SAR=39;SF=1,3,4,5,6,7,8,9,11,12,13,14,15,16,17,18,19,23,24,25,26,29,30,31,32,33,34,35,36;SRF=57;SRP=3.73412;SRR=51;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	0/1:-215.678,0,-283.751:194:108:86:3152:3959	.	0/1:-459.642,0,-548.924:406:213:190:6714:7760:213,190	1/1:-1272.34,-124.927,0:417:0:415:14655:0	1/1:-1613.62,-155.491,0:523:1:520:18718:15:1,520	1/1:-1022.22,-100.951,0:340:1:339:11766:14:1,339	0/1:-722.385,0,-696.076:575:279:291:10384:10085	0/1:-408.3,0,-472.28:349:184:165:5940:6668	1/1:-1099.51,-107.622,0:362:1:361:12699:14:1,361	.	0/1:-599.758,0,-614.788:514:250:261:8647:8876	1/1:-1969.99,-190.327,0:641:1:635:22871:13:1,635	0/1:-571.123,0,-533.113:448:215:232:8137:7701	0/1:-421.226,0,-428.029:340:168:172:6027:6101	0/1:-527.471,0,-608.486:461:237:218:7649:8629	1/1:-1216.72,-117.703,0:393:0:391:14047:0:0,391	0/1:-681.077,0,-546.778:485:217:267:9540:7980	1/1:-826.877,-80.3692,0:278:1:276:9533:33	0/1:-592.412,0,-437.739:415:178:236:8309:6491	.	.	.	0/1:-595.807,0,-544.105:447:212:235:8431:7830	0/1:-313.521,0,-287.538:237:113:124:4425:4133:113,124	0/1:-707.984,0,-793.793:612:308:299:10252:11369:308,299	0/1:-432.501,0,-710.953:475:276:197:6596:9851	.	.	0/1:-739.616,0,-692.149:595:282:308:10566:10079	0/1:-401.418,0,-523.751:371:200:171:5897:7322	0/1:-291.551,0,-370.936:269:145:123:4290:5202	0/1:-416.203,0,-469.447:355:180:172:6018:6630	0/1:-384.574,0,-403.108:312:157:155:5516:5724	0/1:-365.649,0,-465.1:327:175:152:5338:6510	1/1:-673.82,-65.9316,0:224:1:223:7805:15	0/1:-509.614,0,-573.749:431:220:211:7366:8124
+chr10	69934259	.	G	A	7499.37	.	AB=0.498366;ABP=3.02449;AC=1;AF=0.5;AN=2;AO=305;CIGAR=1X;DP=612;DPB=612;DPRA=0;EPP=117.842;EPPR=77.3261;GTI=0;LEN=1;MEANALT=3;MQM=41.5279;MQMR=41.7993;NS=1;NUMALT=1;ODDS=1639.99;PAIRED=0.986885;PAIREDR=0.990132;PAO=0;PQA=0;PQR=0;PRO=0;QA=11119;QR=10502;RO=304;RPL=136;RPP=10.7635;RPPR=3.03887;RPR=169;RUN=1;SAF=141;SAP=6.77656;SAR=164;SF=25;SRF=138;SRP=8.61041;SRR=166;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-770.399,0,-727.863:612:304:305:11119:10502:304,305	.	.	.	.	.	.	.	.	.	.	.
+chr10	69935235	.	T	C	4509.55	.	AB=0;ABP=0;AC=74;AF=1;AN=74;AO=140;CIGAR=1X;DP=5335;DPB=143;DPRA=0;EPP=35.8306;EPPR=0;GTI=0;LEN=1;MEANALT=2;MQM=41.9857;MQMR=0;NS=1;NUMALT=1;ODDS=198.686;PAIRED=0.985714;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=5273;QR=0;RO=0;RPL=87;RPP=20.9405;RPPR=0;RPR=53;RUN=1;SAF=40;SAP=58.8482;SAR=100;SF=0,1,2,3,4,5,6,7,8,9,10,11,12,13,14,15,16,17,18,19,20,21,22,23,24,25,26,27,28,29,30,31,32,33,34,35,36;SRF=0;SRP=0;SRR=0;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	1/1:-454.78,-42.1442,0:143:0:140:5273:0:0,140	1/1:-188.37,-17.7608,0:59:0:59:2188:0	1/1:-451.695,-42.1442,0:142:0:140:5235:0	1/1:-358.571,-33.1133,0:110:0:110:4207:0:0,110	1/1:-433.317,-40.037,0:133:0:133:5018:0	1/1:-425.951,-40.037,0:133:0:133:4957:0:0,133	1/1:-374.832,-32.5525,0:116:1:115:4371:35:1,115	1/1:-498.091,-45.4555,0:153:0:151:5779:0	1/1:-353.358,-32.8123,0:109:0:109:4090:0	1/1:-287.371,-27.0927,0:90:0:90:3339:0:0,90	1/1:-289.982,-26.7917,0:89:0:89:3356:0:0,89	1/1:-774.032,-73.1503,0:243:0:243:8968:0	1/1:-591.141,-54.7875,0:183:0:182:6852:0:0,182	1/1:-749.389,-69.2369,0:230:0:230:8695:0	1/1:-494.02,-45.1545,0:150:0:150:5728:0	1/1:-473.875,-45.1545,0:151:0:150:5516:0	1/1:-322.238,-29.1999,0:97:0:97:3735:0:0,97	1/1:-498.937,-46.0576,0:153:0:153:5800:0	1/1:-266.323,-25.5876,0:85:0:85:3077:0	1/1:-502.071,-45.5617,0:156:1:155:5836:14	1/1:-506.843,-46.0576,0:153:0:153:5875:0:0,153	1/1:-383.878,-35.5215,0:118:0:118:4454:0:0,118	1/1:-398.925,-36.7257,0:122:0:122:4618:0	1/1:-388.408,-35.2205,0:117:0:117:4521:0	1/1:-308.382,-28.2968,0:94:0:94:3568:0:0,94	1/1:-1026.8,-94.5234,0:314:0:314:11919:0:0,314	1/1:-756.227,-70.7421,0:238:0:235:8761:0	1/1:-812.445,-75.2575,0:250:0:250:9454:0:0,250	1/1:-337.139,-32.2102,0:107:0:107:3899:0	1/1:-675.471,-64.1194,0:213:0:213:7876:0	1/1:-395.97,-37.0267,0:123:0:123:4598:0	1/1:-505.367,-45.6628,0:157:1:156:5873:16	1/1:-360.676,-33.4143,0:111:0:111:4176:0	1/1:-357.035,-32.5112,0:108:0:108:4138:0	1/1:-424.244,-39.4349,0:131:0:131:4939:0	1/1:-363.288,-34.0164,0:113:0:113:4202:0	1/1:-454.151,-42.4452,0:141:0:141:5255:0
+chr10	69948844	.	T	C	10867.88	.	AB=0;ABP=0;AC=74;AF=1;AN=74;AO=340;CIGAR=1X;DP=12782;DPB=340;DPRA=0;EPP=45.9544;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=41.9353;MQMR=0;NS=1;NUMALT=1;ODDS=475.945;PAIRED=0.997059;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=12653;QR=0;RO=0;RPL=137;RPP=30.8307;RPPR=0;RPR=203;RUN=1;SAF=146;SAP=17.7252;SAR=194;SF=0,1,2,3,4,5,6,7,8,9,10,11,12,13,14,15,16,17,18,19,20,21,22,23,24,25,26,27,28,29,30,31,32,33,34,35,36;SRF=0;SRP=0;SRR=0;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	1/1:-1094.36,-102.35,0:340:0:340:12653:0:0,340	1/1:-463.99,-43.3483,0:145:0:144:5366:0	1/1:-1238.81,-117.402,0:391:0:390:14315:0	1/1:-1016.39,-94.2224,0:313:0:313:11783:0:0,313	1/1:-1384.23,-129.744,0:431:0:431:16082:0	1/1:-1297.66,-121.917,0:405:0:405:15083:0:0,405	1/1:-938.68,-87.2987,0:290:0:290:10857:0:0,290	1/1:-1433.92,-135.162,0:451:0:449:16664:0	1/1:-864.208,-80.676,0:269:0:268:10013:0	1/1:-982.084,-92.1152,0:307:0:306:11394:0:0,306	1/1:-1148.24,-105.963,0:353:0:352:13301:0:0,352	1/1:-1390.46,-132.754,0:445:0:441:16065:0	1/1:-1556.72,-145.397,0:483:0:483:18040:0:0,483	1/1:-1306.3,-121.71,0:412:1:410:15137:29	1/1:-862.179,-81.2781,0:270:0:270:9970:0	1/1:-1248.66,-117.703,0:392:0:391:14468:0	1/1:-1152.6,-107.769,0:358:0:358:13438:0:0,358	1/1:-1452.75,-136.969,0:455:0:455:16955:0	1/1:-757.264,-71.0431,0:236:0:236:8757:0	1/1:-1083.73,-101.447,0:338:0:337:12539:0	1/1:-1404.7,-132.152,0:439:0:439:16317:0:0,439	1/1:-559.528,-54.4864,0:182:0:181:6456:0:0,181	1/1:-633.567,-60.8081,0:203:0:202:7354:0	1/1:-1275.79,-118.305,0:393:0:393:14788:0	1/1:-565.741,-52.3792,0:174:0:174:6546:0:0,174	1/1:-1667.99,-158.041,0:529:0:525:19328:0:0,525	1/1:-1315.33,-128.239,0:426:0:426:15205:0	1/1:-1617.82,-152.989,0:515:1:512:18730:16:1,512	1/1:-790.094,-77.0637,0:257:0:256:9109:0	1/1:-1649.57,-159.847,0:534:0:531:19082:0	1/1:-975.078,-92.1152,0:306:0:306:11312:0	1/1:-826.93,-77.9668,0:260:0:259:9542:0	1/1:-1030.38,-96.9317,0:322:0:322:11905:0	1/1:-989.254,-92.7172,0:308:0:308:11443:0	1/1:-971.151,-89.5634,0:300:1:299:11248:16	1/1:-598.015,-55.9916,0:187:0:186:6916:0	1/1:-1163.62,-107.277,0:363:1:362:13499:20
+chr10	69959242	.	C	A	8443.45	.	AB=0.44686;ABP=13.1648;AC=30;AF=0.5;AN=46;AO=185;CIGAR=1X;DP=11217;DPB=414;DPRA=0;EPP=3.30374;EPPR=4.61283;GTI=0;LEN=1;MEANALT=1;MQM=40.2865;MQMR=41.8908;NS=1;NUMALT=1;ODDS=995.656;PAIRED=0.994595;PAIREDR=0.995633;PAO=0;PQA=0;PQR=0;PRO=0;QA=6695;QR=8322;RO=229;RPL=107;RPP=12.8817;RPPR=25.7776;RPR=78;RUN=1;SAF=87;SAP=4.43056;SAR=98;SF=3,4,5,6,9,10,11,12,13,15,16,17,18,19,23,24,25,26,29,30,32,34,35;SRF=101;SRP=9.92298;SRR=128;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	0/1:-441.683,0,-596.522:414:229:185:6695:8322:229,185	0/1:-681.953,0,-793.974:586:306:279:10143:11200	1/1:-1970.53,-184.404,0:637:2:633:23497:77:2,633	1/1:-1200.04,-114.692,0:384:0:381:14185:0:0,381	.	.	0/1:-560.775,0,-418.387:387:171:216:8015:6156:171,216	0/1:-571.541,0,-581.455:457:227:227:8435:8285:227,227	0/1:-650.347,0,-723.352:557:285:270:9591:10252	1/1:-1929.14,-180.899,0:624:2:621:22864:77:2,621	1/1:-1566.36,-150.097,0:513:3:508:18558:42	.	0/1:-646.018,0,-708.054:546:279:266:9760:10065	1/1:-1537.64,-144.901,0:486:1:485:18149:14:1,485	0/1:-738.598,0,-781.071:602:306:296:10996:11183	1/1:-1003.7,-96.0286,0:320:0:319:11845:0	0/1:-642.056,0,-696.346:529:272:257:9592:9880	.	.	.	0/1:-704.462,0,-825.359:597:316:281:10397:11611	0/1:-402.396,0,-257.941:263:107:154:5680:3883:107,154	0/1:-784.771,0,-735.17:610:298:312:11405:10573:298,312	0/1:-643.701,0,-723.802:562:290:272:9788:10263	.	.	0/1:-778.699,0,-845.209:661:339:321:11557:12027	0/1:-531.871,0,-483.594:402:191:211:7720:6967	.	0/1:-477.484,0,-643.336:439:243:195:7157:8940	.	0/1:-537.274,0,-535.835:420:209:211:7801:7621	1/1:-691.502,-66.5276,0:221:0:221:8081:0	.
+chr10	69959345	.	GCTGGGAC	GC	3901.75	.	AB=0.473077;ABP=4.64726;AC=31;AF=0.5;AN=46;AO=123;CIGAR=1M6D1M;DP=6911;DPB=167.125;DPRA=0;EPP=52.6011;EPPR=37.3001;GTI=0;LEN=6;MEANALT=4;MQM=31.5691;MQMR=41.8582;NS=1;NUMALT=1;ODDS=462.871;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=4077;QR=4881;RO=134;RPL=86;RPP=45.3981;RPPR=73.5994;RPR=37;RUN=1;SAF=57;SAP=4.44029;SAR=66;SF=3,4,5,6,9,10,11,12,13,15,16,17,18,19,23,24,25,26,29,30,32,34,35;SRF=62;SRP=4.6308;SRR=72;TYPE=del	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	0/1:-217.403,0,-347.143:260:134:123:4077:4881:134,123	0/1:-293.576,0,-374.742:324:144:178:5945:5298	1/1:-842.741,-106.565,0:355:0:354:12136:0:0,354	1/1:-550.733,-70.14,0:234:0:233:7777:0:0,233	.	.	0/1:-237.572,0,-250.795:232:101:130:4360:3687:101,130	0/1:-241.912,0,-329.961:271:129:138:4607:4717:129,138	0/1:-280.034,0,-445.633:356:174:175:5393:6164	1/1:-920.514,-119.208,0:400:0:396:13370:0:0,396	1/1:-776.525,-106.565,0:335:0:332:10425:0	.	0/1:-301.977,0,-314.811:316:130:177:5907:4719	1/1:-744.32,-92.4162,0:309:0:307:10618:0:0,307	1/1:-834.187,-120.111,0:358:0:355:12030:0	1/1:-510.912,-68.6348,0:217:0:214:7149:0	0/1:-263.924,0,-356.84:306:144:154:5149:5192	.	.	.	0/1:-277.886,0,-442.519:334:169:163:5622:6209	0/1:-125.547,0,-236.065:170:90:76:2460:3293:90,76	0/1:-464.938,0,-516.882:457:211:240:7921:7482:211,240	0/1:-307.343,0,-473.245:406:194:196:5832:6817	.	.	0/1:-322.625,0,-594.822:431:229:199:6301:8156	0/1:-178.054,0,-264.851:215:106:108:3499:3790	.	0/1:-180.906,0,-328.295:233:123:106:3496:4533	.	0/1:-191.903,0,-239.548:208:96:110:3713:3491	1/1:-429.59,-62.9153,0:184:0:183:6163:0	.
+chr10	75849841	.	G	A	2393.02	.	AB=0.442396;ABP=9.26454;AC=1;AF=0.5;AN=2;AO=96;CIGAR=1X;DP=217;DPB=217;DPRA=0;EPP=4.45795;EPPR=9.48883;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=41.686;NS=1;NUMALT=1;ODDS=551.013;PAIRED=1;PAIREDR=0.983471;PAO=0;PQA=0;PQR=0;PRO=0;QA=3643;QR=4468;RO=121;RPL=32;RPP=26.1727;RPPR=36.1926;RPR=64;RUN=1;SAF=54;SAP=6.26751;SAR=42;SF=8;SRF=68;SRP=7.04816;SRR=53;TYPE=snp	GT:GL:DP:RO:AO:QA:QR	.	.	.	.	.	.	.	.	0/1:-249.266,0,-320.204:217:121:96:3643:4468	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr10	75849921	.	T	C	2475.44	.	AB=0.543956;ABP=6.06468;AC=1;AF=0.5;AN=2;AO=99;CIGAR=1X;DP=182;DPB=182;DPRA=0;EPP=3.03223;EPPR=3.03646;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=42;NS=1;NUMALT=1;ODDS=458.948;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3651;QR=3113;RO=83;RPL=78;RPP=74.2741;RPPR=76.5003;RPR=21;RUN=1;SAF=45;SAP=4.78696;SAR=54;SF=8;SRF=40;SRP=3.24576;SRR=43;TYPE=snp	GT:GL:DP:RO:AO:QA:QR	.	.	.	.	.	.	.	.	0/1:-262.044,0,-213.895:182:83:99:3651:3113	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr10	75865065	.	G	A	7462.75	.	AB=0.494624;ABP=3.1037;AC=44;AF=0.5;AN=60;AO=184;CIGAR=1X;DP=10571;DPB=372;DPRA=0;EPP=12.2627;EPPR=17.9796;GTI=0;LEN=1;MEANALT=1;MQM=41.9022;MQMR=41.9043;NS=1;NUMALT=1;ODDS=1071.15;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=6863;QR=7079;RO=188;RPL=115;RPP=27.9822;RPPR=5.27418;RPR=69;RUN=1;SAF=59;SAP=54.4175;SAR=125;SF=0,1,2,4,5,6,7,8,10,11,12,13,15,17,18,19,20,21,22,23,25,26,27,28,29,31,32,33,35,36;SRF=69;SRP=31.8863;SRR=119;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	0/1:-480.941,0,-499.495:372:188:184:6863:7079:188,184	0/1:-168.112,0,-200.013:140:74:66:2438:2799	1/1:-1077.73,-102.651,0:341:0:341:12511:0	.	0/1:-420.648,0,-516.31:362:196:166:6132:7219	0/1:-606.064,0,-540.157:442:210:232:8556:7778:210,232	1/1:-924.331,-86.9977,0:289:0:289:10684:0:0,289	1/1:-1433.44,-134.532,0:453:1:451:16615:17	1/1:-969.066,-90.61,0:301:0:301:11219:0	.	1/1:-1130.36,-104.758,0:349:0:348:13080:0:0,348	0/1:-496.562,0,-537.191:412:210:202:7176:7616	1/1:-1543.74,-144.569,0:487:1:484:17856:16:1,484	0/1:-505.958,0,-547.751:409:209:199:7269:7766	.	1/1:-1222.41,-115.897,0:385:0:385:14157:0	.	0/1:-461.068,0,-395.81:328:153:175:6497:5705	0/1:-306.476,0,-322.725:246:124:122:4403:4582	1/1:-1191.99,-112.284,0:373:0:373:13809:0	0/1:-548.176,0,-511.712:408:197:210:7763:7341:197,210	0/1:-236.782,0,-270.131:202:108:94:3440:3810:108,94	0/1:-281.923,0,-343.251:246:132:114:4103:4809	1/1:-1088.13,-100.45,0:339:1:338:12612:16	.	0/1:-698.531,0,-717.757:545:272:271:9979:10181:272,271	1/1:-1223.03,-115.676,0:393:1:390:14217:27	0/1:-552.568,0,-642.258:464:246:217:7981:9043:246,217	1/1:-719.988,-68.0328,0:226:0:226:8316:0	1/1:-1711.97,-164.362,0:546:0:546:19805:0	.	0/1:-226.343,0,-334.54:217:125:91:3367:4600	0/1:-456.023,0,-467.861:359:180:178:6565:6632	1/1:-943.168,-87.2987,0:292:0:290:10909:0	.	1/1:-646.088,-59.5108,0:203:1:202:7484:16	0/1:-665.078,0,-489.98:442:195:247:9265:7194
+chr10	75871735	.	C	G	15516.57	.	AB=0.534992;ABP=9.84892;AC=56;AF=0.5;AN=70;AO=344;CIGAR=1X;DP=23257;DPB=643;DPRA=0;EPP=17.5541;EPPR=43.8616;GTI=0;LEN=1;MEANALT=1;MQM=41.8895;MQMR=41.9331;NS=1;NUMALT=1;ODDS=1668.27;PAIRED=0.994186;PAIREDR=0.996656;PAO=0;PQA=0;PQR=0;PRO=0;QA=12430;QR=10796;RO=299;RPL=81;RPP=212.103;RPPR=74.1896;RPR=263;RUN=1;SAF=199;SAP=21.4173;SAR=145;SF=0,1,2,3,4,5,6,7,8,9,10,11,12,13,14,15,17,18,19,20,21,22,23,24,25,26,27,28,29,31,32,33,34,35,36;SRF=176;SRP=23.4105;SRR=123;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	0/1:-887.942,0,-746.101:643:299:344:12430:10796:299,344	1/1:-912.232,-86.6966,0:288:0:288:10541:0	1/1:-2178.83,-212.828,0:707:0:707:25070:0	0/1:-867.011,0,-863.296:680:341:339:12352:12278:341,339	1/1:-2572.55,-246.845,0:822:0:820:29649:0	0/1:-1105.82,0,-1200.65:910:467:440:15886:16950:467,440	1/1:-1628.98,-156.536,0:520:0:520:18734:0:0,520	1/1:-2772.73,-267.315,0:891:0:888:31900:0	1/1:-1748.03,-167.975,0:560:0:558:20124:0	0/1:-748.59,0,-756.23:599:302:296:10668:10755:302,296	1/1:-2144.19,-206.507,0:687:0:686:24690:0:0,686	0/1:-1011.19,0,-999.051:830:411:416:14478:14321	1/1:-2865.54,-276.647,0:919:0:919:32980:0:0,919	0/1:-928.735,0,-805.5:699:333:365:13094:11665	0/1:-688.25,0,-710.086:555:281:274:9810:10073	1/1:-2471.18,-241.255,0:806:1:804:28486:12	.	0/1:-924.341,0,-1171.63:826:451:375:13495:16327	0/1:-566.378,0,-593.448:464:236:227:8100:8422	1/1:-2141.22,-208.915,0:696:0:694:24707:0	0/1:-1219.4,0,-988.3:878:402:476:17102:14424:402,476	0/1:-441.248,0,-276.128:293:122:171:6083:4173:122,171	0/1:-447.75,0,-310.316:306:131:175:6197:4626	1/1:-2495.41,-239.559,0:802:1:799:28742:14	0/1:-378.179,0,-459.971:335:181:154:5558:6432:181,154	0/1:-1317.81,0,-1190.96:1018:492:526:18669:17213:492,526	1/1:-2582.36,-255.574,0:850:0:849:29735:0	1/1:-2470.33,-241.426,0:804:0:802:28489:0:0,802	1/1:-1350.81,-132.453,0:441:0:440:15542:0	1/1:-2864.94,-282.667,0:941:0:939:32923:0	.	1/1:-1188.12,-115.401,0:388:1:387:13647:14	1/1:-2234.9,-216.441,0:719:0:719:25668:0	1/1:-1784.84,-171.587,0:570:0:570:20523:0	1/1:-1863.79,-182.123,0:606:0:605:21503:0	1/1:-1100.9,-106.264,0:353:0:353:12651:0	1/1:-2649.72,-256.177,0:851:0:851:30543:0
+chr10	88439177	.	G	A	6258.59	.	AB=0.493151;ABP=3.21852;AC=1;AF=0.5;AN=2;AO=252;CIGAR=1X;DP=511;DPB=511;DPRA=0;EPP=11.8341;EPPR=3.2199;GTI=0;LEN=1;MEANALT=1;MQM=41.5794;MQMR=41.9846;NS=1;NUMALT=1;ODDS=1441.09;PAIRED=0.988095;PAIREDR=0.996139;PAO=0;PQA=0;PQR=0;PRO=0;QA=9143;QR=9678;RO=259;RPL=106;RPP=16.7974;RPPR=60.7681;RPR=146;RUN=1;SAF=140;SAP=9.76599;SAR=112;SF=5;SRF=134;SRP=3.68941;SRR=125;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	0/1:-636.164,0,-683.309:511:259:252:9143:9678:259,252	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr10	88441198	.	C	T	1934.44	.	AB=0.589552;ABP=12.3444;AC=1;AF=0.5;AN=2;AO=79;CIGAR=1X;DP=134;DPB=134;DPRA=0;EPP=4.35716;EPPR=3.04978;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=42;NS=1;NUMALT=1;ODDS=275.649;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2898;QR=2020;RO=55;RPL=11;RPP=92.3155;RPPR=76.0113;RPR=68;RUN=1;SAF=47;SAP=9.19487;SAR=32;SF=0;SRF=34;SRP=9.68264;SRR=21;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	0/1:-211.208,0,-135.507:134:55:79:2898:2020:55,79	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr10	88441223	.	G	A	1225.53	.	AB=0.621951;ABP=13.6028;AC=1;AF=0.5;AN=2;AO=51;CIGAR=1X;DP=82;DPB=82;DPRA=0;EPP=21.7871;EPPR=14.8483;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=42;NS=1;NUMALT=1;ODDS=143.604;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1856;QR=1124;RO=31;RPL=9;RPP=49.3776;RPPR=28.2974;RPR=42;RUN=1;SAF=24;SAP=3.3935;SAR=27;SF=6;SRF=13;SRP=4.76149;SRR=18;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	0/1:-136.376,0,-72.9896:82:31:51:1856:1124:31,51	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr10	88445385	.	G	C	7308.27	.	AB=0.475083;ABP=4.63349;AC=54;AF=0.5;AN=68;AO=143;CIGAR=1X;DP=10626;DPB=301;DPRA=0;EPP=28.5365;EPPR=37.369;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=41.9873;NS=1;NUMALT=1;ODDS=828.119;PAIRED=0.986014;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=5392;QR=5859;RO=158;RPL=43;RPP=52.3468;RPPR=43.0863;RPR=100;RUN=1;SAF=86;SAP=15.781;SAR=57;SF=0,2,3,4,5,6,9,10,11,12,13,14,15,16,17,18,19,20,21,22,23,24,25,26,27,28,29,30,31,32,33,34,35,36;SRF=84;SRP=4.38465;SRR=74;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	0/1:-375.56,0,-417.1:301:158:143:5392:5859:158,143	.	0/1:-361.471,0,-411.115:307:160:146:5237:5814	0/1:-341.933,0,-411.515:292:155:136:4981:5779:155,136	1/1:-1067.01,-100.845,0:335:0:335:12368:0	0/1:-540.417,0,-520.825:411:202:208:7719:7459:202,208	1/1:-743.121,-66.0575,0:233:2:231:8651:51:2,231	.	.	0/1:-432.203,0,-314.473:293:127:166:6022:4693:127,166	1/1:-973.011,-90.9111,0:302:0:302:11260:0:0,302	1/1:-1277.7,-117.475,0:404:1:399:14835:33	1/1:-1416.64,-132.453,0:441:0:440:16442:0:0,440	1/1:-1105.22,-103.583,0:348:1:347:12806:12	1/1:-927.935,-87.5997,0:292:0:291:10725:0	0/1:-499.469,0,-454.66:373:176:195:7074:6571	1/1:-900.41,-83.6863,0:278:0:278:10421:0:0,278	0/1:-372.749,0,-512.925:343:193:149:5517:7116	1/1:-751.754,-67.1474,0:236:1:233:8730:37	1/1:-1112.57,-103.253,0:343:0:343:12889:0	1/1:-1295.17,-115.183,0:406:2:403:15071:78:2,403	0/1:-331.722,0,-82.0539:165:41:124:4387:1517:41,124	1/1:-516.261,-50.272,0:167:0:167:5944:0	1/1:-1192.43,-112.284,0:375:0:373:13811:0	0/1:-183.411,0,-234.889:161:89:72:2674:3274:89,72	0/1:-592.324,0,-643.65:483:250:232:8533:9120:250,232	0/1:-432.081,0,-561.601:403:222:179:6397:7861	1/1:-1344.14,-129.443,0:431:0:430:15639:0:0,430	0/1:-300.277,0,-327.609:250:128:122:4333:4661	1/1:-1450.75,-141.484,0:470:0:470:16823:0	1/1:-810.741,-77.3647,0:257:0:257:9375:0	0/1:-284.079,0,-256.712:213:101:111:4026:3701	1/1:-944.917,-90.008,0:299:0:299:10940:0	1/1:-822.256,-72.3497,0:262:3:258:9582:99	0/1:-402.831,0,-340.489:289:135:153:5668:4942	1/1:-511.974,-47.2617,0:158:0:157:5929:0	1/1:-973.298,-91.5131,0:305:0:304:11290:0
+chr10	88447027	.	T	C	4166.90	.	AB=0.450413;ABP=13.3472;AC=1;AF=0.5;AN=2;AO=218;CIGAR=1X;DP=484;DPB=484;DPRA=0;EPP=15.9196;EPPR=6.43345;GTI=0;LEN=1;MEANALT=3;MQM=40.4312;MQMR=41.2402;NS=1;NUMALT=1;ODDS=959.465;PAIRED=0.954128;PAIREDR=0.969432;PAO=0;PQA=0;PQR=0;PRO=0;QA=6669;QR=7221;RO=229;RPL=163;RPP=119.194;RPPR=95.9474;RPR=55;RUN=1;SAF=102;SAP=4.96263;SAR=116;SF=19;SRF=107;SRP=5.14384;SRR=122;TYPE=snp	GT:GL:DP:RO:AO:QA:QR	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-437.548,0,-491.197:484:229:218:6669:7221	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr10	88466465	.	C	T	3040.03	.	AB=0.537234;ABP=5.27418;AC=2;AF=0.5;AN=4;AO=101;CIGAR=1X;DP=415;DPB=188;DPRA=0;EPP=9.22372;EPPR=7.95924;GTI=0;LEN=1;MEANALT=2;MQM=41.9802;MQMR=42;NS=1;NUMALT=1;ODDS=489.951;PAIRED=1;PAIREDR=0.976744;PAO=0;PQA=0;PQR=0;PRO=0;QA=3841;QR=3191;RO=86;RPL=47;RPP=4.06379;RPPR=3.0103;RPR=54;RUN=1;SAF=55;SAP=4.75178;SAR=46;SF=6,15;SRF=45;SRP=3.41429;SRR=41;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	0/1:-275.28,0,-220.009:188:86:101:3841:3191:86,101	.	.	.	.	.	.	.	.	0/1:-348.329,0,-237.064:227:97:130:4821:3550	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr10	88485931	.	C	T	2514.67	.	AB=0.486381;ABP=3.42432;AC=2;AF=0.5;AN=4;AO=125;CIGAR=1X;DP=431;DPB=257;DPRA=0;EPP=3.86152;EPPR=5.37918;GTI=0;LEN=1;MEANALT=1;MQM=41.952;MQMR=41.8409;NS=1;NUMALT=1;ODDS=704.595;PAIRED=0.992;PAIREDR=0.984848;PAO=0;PQA=0;PQR=0;PRO=0;QA=4522;QR=4754;RO=132;RPL=52;RPP=10.6713;RPPR=8.34028;RPR=73;RUN=1;SAF=70;SAP=6.91895;SAR=55;SF=29,30;SRF=77;SRP=10.9724;SRR=55;TYPE=snp	GT:GL:DP:RO:AO:QA:QR	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-314.025,0,-335.295:257:132:125:4522:4754	0/1:-207.024,0,-240.548:174:93:79:3000:3373	.	.	.	.	.	.
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+chr10	92678740	.	AATAAATAAATATATATATATATATATATATATAG	AATATATGTATATATAG,AATATATATAG,AATATATATATATATAG,AATATATATATATATATATATATATATAG,AATATATATATATATATATATATATATATATAG,AATATATGTATATATAGCATGAGAGATATATATATAG,AATATATATATATATATATATATATATATATATAG,AATATATGTATATATAGCATGATATATATATATATAG	386.08	.	AB=0.277778,0.472222;ABP=18.4519,3.25157;AC=4,6,21,2,1,2,1,4;AF=0.5,0.5;AN=50;AO=10,17;CIGAR=4M1X2M2X7M1X1I2M1I1M,1M18D1M;DP=1061;DPB=28.15;DPRA=0,0;EPP=10.8276,3.13803;EPPR=3.44459;GTI=0;LEN=22,18;MEANALT=6,6;MQM=17.1,18.7647;MQMR=42;NS=1;NUMALT=2;ODDS=3.20899;PAIRED=1,1;PAIREDR=1;PAO=7.5,0;PQA=233.5,0;PQR=49.5;PRO=1.5;QA=112,525;QR=187;RO=5;RPL=10,6;RPP=24.725,6.20364;RPPR=3.44459;RPR=0,11;RUN=1,1;SAF=8,6;SAP=10.8276,6.20364;SAR=2,11;SF=2,3,4,5,6,8,11,13,15,16,18,19,20,21,22,24,25,26,30,31,32,33,34,35,36;SRF=1;SRP=6.91895;SRR=4;TYPE=complex,del	GT:GL:DP:RO:AO:QA:QR:AD	.	.	8/3:.,.,.,.,.,.,.,.,.,-16.5919,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,0,.,.,.,.,-14.2028:36:5:.,.,17,.,.,.,.,10:.,.,525,.,.,.,.,112:187	1/2:.,.,-11.7728,.,0,-18.9653,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.:32:0:20,11,.,.,.,.,.,.:353,398,.,.,.,.,.,.:0:0,20,11	0/3:.,.,.,.,.,.,.,.,.,-48.4964,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.:45:15:.,.,15,.,.,.,.,.:.,.,448,.,.,.,.,.:563	6/3:.,.,.,.,.,.,.,.,.,-14.4976,.,.,.,.,.,.,.,.,.,.,.,.,.,.,0,.,.,-28.4622,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.:44:0:.,.,30,.,.,14,.,.:.,.,562,.,.,347,.,.:0:0,14,30	1/1:-15.1332,-1.58746,0,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.:20:2:14,.,.,.,.,.,.,.:277,.,.,.,.,.,.,.:76:2,14	.	0/3:.,.,.,.,.,.,.,.,.,-26.0402,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.:25:8:.,.,9,.,.,.,.,.:.,.,281,.,.,.,.,.:303	.	.	8/3:.,.,.,.,.,.,.,.,.,-65.6906,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,0,.,.,.,.,-81.0685:100:0:.,.,72,.,.,.,.,26:.,.,2270,.,.,.,.,354:0	.	0/3:.,.,.,.,.,.,.,.,.,-37.3682,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.:73:14:.,.,38,.,.,.,.,.:.,.,1181,.,.,.,.,.:504	.	8/3:.,.,.,.,.,.,.,.,.,-29.4506,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,0,.,.,.,.,-7.51799:34:0:.,.,13,.,.,.,.,10:.,.,363,.,.,.,.,133:0	3/3:.,.,.,.,.,.,.,.,.,0,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.:54:0:.,.,38,.,.,.,.,.:.,.,668,.,.,.,.,.:0:0,38	.	2/4:.,.,.,.,.,-16.2706,.,.,.,.,.,.,0,.,-20.607,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.:25:0:.,16,.,5,.,.,.,.:.,513,.,190,.,.,.,.:0	0/3:.,.,.,.,.,.,.,.,.,-42.0157,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.:51:12:.,.,25,.,.,.,.,.:.,.,800,.,.,.,.,.:451	0/2:.,.,.,.,.,-9.76764,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.:17:5:.,10,.,.,.,.,.,.:.,349,.,.,.,.,.,.:185:5,10	6/3:.,.,.,.,.,.,.,.,.,-13.1615,.,.,.,.,.,.,.,.,.,.,.,.,.,.,0,.,.,-22.1495,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.:35:3:.,.,16,.,.,8,.,.:.,.,373,.,.,240,.,.:107:3,8,16	0/3:.,.,.,.,.,.,.,.,.,-26.3053,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.:41:9:.,.,17,.,.,.,.,.:.,.,537,.,.,.,.,.:329	.	3/3:.,.,.,.,.,.,.,.,.,0,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.:16:0:.,.,13,.,.,.,.,.:.,.,411,.,.,.,.,.:0:0,13	0/3:.,.,.,.,.,.,.,.,.,-1.86561,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.:74:6:.,.,42,.,.,.,.,.:.,.,770,.,.,.,.,.:210:6,42	1/2:.,.,-36.9322,.,0,-38.4533,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.:65:0:33,30,.,.,.,.,.,.:624,850,.,.,.,.,.,.:0	.	.	.	0/3:.,.,.,.,.,.,.,.,.,-33.8803,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.:51:14:.,.,21,.,.,.,.,.:.,.,671,.,.,.,.,.:509	2/4:.,.,.,.,.,-21.5324,.,.,.,.,.,.,0,.,-11.4188,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.:27:0:.,14,.,8,.,.,.,.:.,374,.,233,.,.,.,.:0	0/3:.,.,.,.,.,.,.,.,.,-26.3326,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.:39:9:.,.,19,.,.,.,.,.:.,.,657,.,.,.,.,.:339	7/3:.,.,.,.,.,.,.,.,.,-27.1477,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,0,.,.,.,-16.3098,.,.,.,.,.,.,.,.,.:32:0:.,.,14,.,.,.,7,.:.,.,486,.,.,.,264,.:0	3/3:.,.,.,.,.,.,.,.,.,0,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.:44:0:.,.,33,.,.,.,.,.:.,.,1060,.,.,.,.,.:0	5/2:.,.,.,.,.,-28.0317,.,.,.,.,.,.,.,.,.,.,.,0,.,.,-9.99556,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.:16:0:.,10,.,.,5,.,.,.:.,353,.,.,190,.,.,.:0	8/3:.,.,.,.,.,.,.,.,.,-68.3356,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,0,.,.,.,.,-50.5839:65:0:.,.,46,.,.,.,.,16:.,.,1453,.,.,.,.,299:0
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+chr10	92678755	.	ATATATAT	AGCATGAGAG	106.85	.	AB=0.296296;ABP=12.7417;AC=1;AF=0.5;AN=2;AO=8;CIGAR=1M1I1X2M1I1M1X1M1X;DP=27;DPB=31.5;DPRA=0;EPP=4.09604;EPPR=4.9405;GTI=0;LEN=10;MEANALT=2;MQM=30.75;MQMR=41.8889;NS=1;NUMALT=1;ODDS=24.603;PAIRED=1;PAIREDR=1;PAO=3;PQA=108;PQR=68;PRO=2;QA=276;QR=675;RO=18;RPL=8;RPP=20.3821;RPPR=26.6552;RPR=0;RUN=1;SAF=5;SAP=4.09604;SAR=3;SF=17;SRF=5;SRP=10.7311;SRR=13;TYPE=complex	GT:GL:DP:RO:AO:QA:QR	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-18.0463,0,-54.9787:27:18:8:276:675	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr10	92678756	.	T	G	39.55	.	AB=0.206897;ABP=24.6501;AC=1;AF=0.5;AN=2;AO=6;CIGAR=1X;DP=29;DPB=29;DPRA=0;EPP=4.45795;EPPR=3.63072;GTI=0;LEN=1;MEANALT=3;MQM=37.1667;MQMR=38.2143;NS=1;NUMALT=1;ODDS=9.10722;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=190;QR=534;RO=14;RPL=6;RPP=16.0391;RPPR=12.937;RPR=0;RUN=1;SAF=2;SAP=4.45795;SAR=4;SF=28;SRF=5;SRP=5.49198;SRR=9;TYPE=snp	GT:GL:DP:RO:AO:QA:QR	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-10.4538,0,-36.5511:29:14:6:190:534	.	.	.	.	.	.	.	.
+chr10	92678765	.	A	G	391.43	.	AB=0.612903;ABP=6.44263;AC=27;AF=0.5;AN=42;AO=19;CIGAR=1X;DP=851;DPB=31;DPRA=0;EPP=12.2676;EPPR=4.78696;GTI=0;LEN=1;MEANALT=2;MQM=21.2105;MQMR=41.8182;NS=1;NUMALT=1;ODDS=41.0745;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=686;QR=399;RO=11;RPL=10;RPP=3.12459;RPPR=7.94546;RPR=9;RUN=1;SAF=8;SAP=4.03889;SAR=11;SF=2,4,5,8,10,11,13,15,16,17,19,21,22,24,25,28,30,32,33,34,36;SRF=6;SRP=3.20771;SRR=5;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	0/1:-24.3811,0,-25.7171:31:11:19:686:399	.	0/1:-21.1948,0,-54.4773:39:21:18:693:787	1/1:-72.4312,-11.4391,0:38:0:38:1390:0:0,38	.	.	0/1:-18.7163,0,-26.2897:23:10:13:485:380	.	0/1:-24.9175,0,-41.3133:35:16:19:717:601:16,19	1/1:-151.345,-22.3481,0:82:1:81:2988:32	.	0/1:-69.1303,0,-57.6185:74:27:47:1761:919	.	0/1:-22.0752,0,-24.5121:28:12:16:597:402	1/1:-77.0624,-13.5464,0:46:0:45:1661:0:0,45	0/1:-23.0094,0,-54.0327:35:20:15:553:740	.	0/1:-32.5811,0,-40.758:45:17:27:1006:618	.	0/1:-33.4408,0,-32.894:34:15:19:725:490:15,19	0/1:-30.606,0,-37.7422:37:16:21:732:558	.	1/1:-27.5631,-0.93476,0:15:1:14:525:37:1,14	0/1:-71.1061,0,-35.52:66:18:48:1792:630:18,48	.	.	0/1:-6.16366,0,-32.5576:19:12:7:216:450	.	0/1:-26.0469,0,-44.6519:42:19:23:854:654	.	0/1:-29.1061,0,-34.147:35:14:21:804:509	0/1:-24.7528,0,-48.0711:36:19:17:645:700	1/1:-74.0117,-11.4402,0:39:1:38:1406:39	.	1/1:-95.1551,-13.4504,0:52:1:51:1838:29
+chr10	101473218	.	A	G	6091.83	.	AB=0;ABP=0;AC=68;AF=1;AN=72;AO=208;CIGAR=1X;DP=7368;DPB=208;DPRA=0;EPP=4.51363;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=41.6635;MQMR=0;NS=1;NUMALT=1;ODDS=292.954;PAIRED=0.995192;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=7795;QR=0;RO=0;RPL=98;RPP=4.51363;RPPR=0;RPR=110;RUN=1;SAF=94;SAP=7.18621;SAR=114;SF=0,1,2,3,4,5,6,7,8,9,10,11,12,13,14,15,16,17,18,19,20,21,22,23,24,25,26,27,28,29,30,31,32,34,35,36;SRF=0;SRP=0;SRR=0;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	1/1:-670.094,-62.6142,0:208:0:208:7795:0:0,208	1/1:-265.82,-25.5876,0:85:0:85:3078:0	1/1:-593.543,-56.5936,0:188:0:188:6858:0	1/1:-582.629,-53.5833,0:178:0:178:6759:0:0,178	1/1:-747.546,-68.991,0:234:1:233:8746:15	1/1:-702.517,-65.6245,0:218:0:218:8141:0:0,218	1/1:-505.532,-47.2617,0:157:0:157:5845:0:0,157	1/1:-792.567,-73.7245,0:251:1:249:9193:17	1/1:-550.096,-51.7772,0:173:0:172:6398:0	1/1:-553.901,-51.4761,0:171:0:171:6404:0:0,171	1/1:-828.163,-77.3647,0:258:0:257:9600:0:0,257	1/1:-904.761,-86.6966,0:289:0:288:10495:0	1/1:-914.059,-84.5894,0:282:0:281:10580:0:0,281	1/1:-897.421,-84.8905,0:282:0:282:10405:0	0/1:-178.89,0,-220.936:153:81:71:2637:3090	1/1:-666.904,-63.2163,0:210:0:210:7729:0	1/1:-768.618,-71.6451,0:238:0:238:8903:0:0,238	1/1:-722.702,-68.9359,0:229:0:229:8380:0	0/1:-191.085,0,-144.942:129:56:73:2650:2124	1/1:-555.521,-51.7772,0:172:0:172:6481:0	1/1:-718.736,-68.0328,0:226:0:226:8323:0:0,226	1/1:-430.046,-39.5425,0:137:1:136:4982:17:1,136	1/1:-494.412,-46.3586,0:154:0:154:5711:0	1/1:-703.986,-65.9256,0:219:0:219:8150:0	1/1:-343.304,-31.9092,0:106:0:106:3968:0:0,106	1/1:-1117.69,-103.662,0:350:1:349:12982:17:1,349	0/1:-365.54,0,-342.161:285:136:148:5253:4934	1/1:-819.198,-78.2678,0:260:0:260:9496:0:0,260	1/1:-539.167,-51.1751,0:170:0:170:6237:0	1/1:-987.425,-92.8411,0:314:1:313:11455:18	1/1:-560.87,-52.3792,0:174:0:174:6485:0	1/1:-525.266,-49.67,0:165:0:165:6076:0	0/1:-230.629,0,-249.043:181:92:89:3304:3515	.	1/1:-605.573,-55.9916,0:186:0:186:7009:0	1/1:-385.023,-35.8226,0:119:0:119:4449:0	1/1:-705.665,-65.3235,0:217:0:217:8162:0
+chr10	101474499	.	T	C	2019.96	.	AB=0.330769;ABP=35.3485;AC=13;AF=0.5;AN=20;AO=43;CIGAR=1X;DP=1183;DPB=130;DPRA=0;EPP=4.27278;EPPR=16.2139;GTI=0;LEN=1;MEANALT=1;MQM=41.9535;MQMR=41.977;NS=1;NUMALT=1;ODDS=178.796;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1558;QR=3240;RO=87;RPL=41;RPP=79.8198;RPPR=62.9379;RPR=2;RUN=1;SAF=17;SAP=7.10075;SAR=26;SF=0,2,4,9,11,13,18,28,35,36;SRF=36;SRP=8.62618;SRR=51;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	0/1:-96.4275,0,-241.542:130:87:43:1558:3240:87,43	.	0/1:-220.441,0,-117.98:137:51:84:3024:1836	.	0/1:-200.927,0,-173.198:143:66:76:2818:2503	.	.	.	.	1/1:-360.217,-34.0164,0:114:0:113:4164:0:0,113	.	0/1:-199.858,0,-131.948:133:56:77:2765:1980	.	1/1:-341.978,-32.8123,0:112:0:109:3956:0	.	.	.	.	0/1:-181.237,0,-64.1461:96:29:67:2426:1071	.	.	.	.	.	.	.	.	.	1/1:-284.944,-27.3937,0:91:0:91:3294:0	.	.	.	.	.	.	0/1:-111.691,0,-113.207:88:43:45:1592:1619	0/1:-193.477,0,-154.215:139:62:77:2738:2264
+chr10	112404302	.	G	A	386.13	.	AB=0.363636;ABP=10.1169;AC=10;AF=0.5;AN=18;AO=16;CIGAR=1X;DP=375;DPB=44;DPRA=0;EPP=3.0103;EPPR=3.0103;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=42;NS=1;NUMALT=1;ODDS=55.7343;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=535;QR=997;RO=28;RPL=16;RPP=37.7539;RPPR=63.8115;RPR=0;RUN=1;SAF=8;SAP=3.0103;SAR=8;SF=4,8,14,16,23,25,26,33,34;SRF=14;SRP=3.0103;SRR=14;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	0/1:-34.0609,0,-74.0315:44:28:16:535:997	.	.	.	0/1:-50.4832,0,-63.5026:47:25:22:737:887	.	.	.	.	.	0/1:-15.144,0,-27.0786:16:10:6:226:362	.	0/1:-73.2719,0,-38.092:44:17:27:989:583:17,27	.	.	.	.	.	.	0/1:-46.1061,0,-124.385:72:49:22:769:1685	.	0/1:-71.3376,0,-92.4792:66:36:30:1039:1282:36,30	0/1:-46.0576,0,-22.4335:29:11:18:624:353	.	.	.	.	.	.	1/1:-83.2345,-6.22028,0:31:1:29:1006:30	0/1:-17.5044,0,-46.213:26:18:8:286:615	.	.
+chr10	112404420	.	G	A	13.87	.	AB=0.333333;ABP=4.45795;AC=1;AF=0.5;AN=2;AO=2;CIGAR=1X;DP=6;DPB=6;DPRA=0;EPP=3.0103;EPPR=5.18177;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=42;NS=1;NUMALT=1;ODDS=3.15171;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=77;QR=131;RO=4;RPL=2;RPP=7.35324;RPPR=3.0103;RPR=0;RUN=1;SAF=1;SAP=3.0103;SAR=1;SF=31;SRF=3;SRP=5.18177;SRR=1;TYPE=snp	GT:GL:DP:RO:AO:QA:QR	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-5.20298,0,-9.90626:6:4:2:77:131	.	.	.	.	.
+chr10	112541062	.	G	A	2316.03	.	AB=0.377778;ABP=38.0434;AC=1;AF=0.5;AN=2;AO=102;CIGAR=1X;DP=270;DPB=270;DPRA=0;EPP=30.6008;EPPR=37.9607;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=42;NS=1;NUMALT=1;ODDS=533.285;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3763;QR=6165;RO=168;RPL=55;RPP=4.37279;RPPR=4.87156;RPR=47;RUN=1;SAF=50;SAP=3.09546;SAR=52;SF=18;SRF=76;SRP=6.31921;SRR=92;TYPE=snp	GT:GL:DP:RO:AO:QA:QR	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-244.687,0,-452.638:270:168:102:3763:6165	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr10	112543217	.	G	A	6928.95	.	AB=0.53125;ABP=5.72464;AC=52;AF=0.5;AN=70;AO=170;CIGAR=1X;DP=11051;DPB=320;DPRA=0;EPP=6.28028;EPPR=19.7451;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=41.76;NS=1;NUMALT=1;ODDS=805.92;PAIRED=0.994118;PAIREDR=0.986667;PAO=0;PQA=0;PQR=0;PRO=0;QA=6445;QR=5496;RO=150;RPL=132;RPP=115.876;RPPR=130.925;RPR=38;RUN=1;SAF=61;SAP=32.4401;SAR=109;SF=0,1,3,4,5,6,7,8,9,10,11,12,13,14,15,16,17,18,19,20,21,22,23,24,25,26,27,28,29,30,32,33,34,35,36;SRF=44;SRP=58.6579;SRR=106;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	0/1:-460.544,0,-378.25:320:150:170:6445:5496:150,170	0/1:-208.649,0,-197.381:153:76:77:2947:2807	.	1/1:-978.569,-91.2121,0:303:0:303:11329:0:0,303	0/1:-409.547,0,-533.785:364:202:162:5996:7415	0/1:-562.383,0,-555.88:430:216:214:8001:7899:216,214	0/1:-335.169,0,-360.574:265:137:128:4796:5075:137,128	1/1:-1302.05,-121.616,0:404:0:404:15116:0	1/1:-836.223,-78.2678,0:260:0:260:9674:0	0/1:-356.792,0,-418.07:295:158:137:5146:5842:158,137	1/1:-920.555,-85.4925,0:285:0:284:10661:0:0,284	1/1:-1255.23,-118.305,0:394:0:393:14522:0	0/1:-614.817,0,-613.903:468:234:233:8739:8711:234,233	1/1:-1128.81,-103.474,0:356:1:354:13085:38	1/1:-805.501,-74.3544,0:247:0:247:9320:0	1/1:-1137.27,-105.963,0:352:0:352:13160:0	0/1:-424.189,0,-457.253:334:172:162:6073:6440:172,162	1/1:-1274.07,-115.553,0:396:1:395:14813:38	0/1:-301.881,0,-266.89:216:103:113:4261:3825	1/1:-1097.68,-96.6071,0:344:2:341:12781:75	0/1:-660.4,0,-506.235:448:200:247:9188:7393:200,247	0/1:-313.638,0,-55.6526:142:31:111:4112:1130:31,111	1/1:-455.122,-43.0473,0:143:0:143:5252:0	1/1:-1211.44,-111.983,0:372:0:372:14026:0	0/1:-264.02,0,-195.216:175:77:98:3656:2858:77,98	0/1:-651.581,0,-593.052:476:229:246:9190:8489:229,246	0/1:-572.12,0,-507.655:425:201:224:8165:7337	1/1:-1296.62,-122.218,0:406:0:406:15036:0:0,406	1/1:-778.293,-73.1503,0:244:0:243:9019:0	1/1:-1523.56,-143.591,0:477:0:477:17694:0	1/1:-778.27,-72.2472,0:240:0:240:8994:0	.	0/1:-444.536,0,-383.126:317:149:167:6238:5512	0/1:-408.682,0,-306.127:272:120:152:5666:4474	0/1:-334.532,0,-373.966:271:142:129:4834:5246	0/1:-190.748,0,-187.358:144:72:72:2703:2660	1/1:-994.915,-94.2224,0:313:0:313:11515:0
+chr10	112544063	.	A	C	2722.58	.	AB=0.468254;ABP=4.11327;AC=46;AF=0.5;AN=70;AO=59;CIGAR=1X;DP=4858;DPB=126;DPRA=0;EPP=13.6468;EPPR=18.9344;GTI=0;LEN=1;MEANALT=2;MQM=42;MQMR=42;NS=1;NUMALT=1;ODDS=320.37;PAIRED=1;PAIREDR=0.969697;PAO=0;PQA=0;PQR=0;PRO=0;QA=2192;QR=2472;RO=66;RPL=11;RPP=53.3958;RPPR=50.5195;RPR=48;RUN=1;SAF=32;SAP=3.93042;SAR=27;SF=0,1,2,4,5,6,7,8,9,10,11,12,13,14,15,16,17,18,19,20,21,22,24,25,26,27,28,29,30,31,32,33,34,35,36;SRF=36;SRP=4.19474;SRR=30;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	0/1:-151.802,0,-175.884:126:66:59:2192:2472:66,59	0/1:-63.5207,0,-57.4015:45:22:23:891:817	0/1:-230.424,0,-153.669:147:61:86:3172:2302	.	0/1:-217.435,0,-201.935:158:77:81:3068:2886	0/1:-248.497,0,-211.243:171:79:92:3469:3045:79,92	0/1:-140.592,0,-120.21:99:47:52:1971:1743:47,52	1/1:-504.575,-46.3586,0:154:0:154:5850:0	1/1:-311.634,-28.5979,0:95:0:95:3611:0	1/1:-409.047,-36.6319,0:127:1:126:4765:16:1,126	0/1:-143.668,0,-201.169:132:75:57:2121:2797:75,57	1/1:-678.128,-64.1194,0:213:0:213:7842:0	0/1:-306.814,0,-196.475:195:79:115:4240:2946:79,115	0/1:-254.044,0,-222.761:181:85:96:3567:3223	1/1:-415.428,-38.5318,0:128:0:128:4805:0	1/1:-469.278,-43.9504,0:146:0:146:5438:0	0/1:-196.566,0,-186.666:145:70:75:2774:2666:70,75	0/1:-231.457,0,-152.09:143:59:84:3193:2274	0/1:-119.08,0,-123.144:91:46:44:1694:1737	1/1:-518.156,-47.5627,0:158:0:158:6002:0	0/1:-288.023,0,-169.176:175:69:105:3973:2579:69,105	0/1:-202.208,0,-19.3009:84:14:70:2631:511:14,70	1/1:-320.974,-29.802,0:99:0:99:3714:0	.	0/1:-87.0661,0,-99.6151:70:37:33:1250:1394:37,33	1/1:-839.121,-78.2678,0:260:0:260:9737:0:0,260	0/1:-246.863,0,-178.544:165:70:94:3417:2633	0/1:-235.299,0,-263.961:194:103:91:3411:3751:103,91	0/1:-143.27,0,-181.459:122:67:55:2080:2530	1/1:-728.013,-67.9469,0:231:1:229:8470:15	0/1:-137.157,0,-121.3:99:47:52:1941:1757	0/1:-160.329,0,-140.479:117:56:61:2253:2026	0/1:-161.108,0,-190.004:131:70:61:2321:2673	0/1:-146.157,0,-132.29:106:51:55:2057:1900	0/1:-168.292,0,-165.027:123:61:62:2376:2338	0/1:-60.4642,0,-121.762:70:45:25:940:1668	1/1:-515.095,-47.5627,0:158:0:158:5965:0
+chr10	112544655	.	C	T	2274.80	.	AB=0.483871;ABP=3.29049;AC=7;AF=0.5;AN=12;AO=60;CIGAR=1X;DP=933;DPB=124;DPRA=0;EPP=40.0701;EPPR=37.7539;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=42;NS=1;NUMALT=1;ODDS=339.221;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2268;QR=2393;RO=64;RPL=21;RPP=14.7363;RPPR=6.40323;RPR=39;RUN=1;SAF=31;SAP=3.15506;SAR=29;SF=3,10,13,17,23,28;SRF=29;SRP=4.23175;SRR=35;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	0/1:-158.481,0,-170.272:124:64:60:2268:2393:64,60	.	.	.	.	.	.	0/1:-173.265,0,-184.871:137:69:68:2573:2609:69,68	.	.	0/1:-244.969,0,-317.613:217:119:98:3592:4440	.	.	.	0/1:-197.737,0,-223.837:161:86:75:2863:3166	.	.	.	.	.	1/1:-462.891,-40.6637,0:148:1:145:5426:38	.	.	.	.	0/1:-196.385,0,-179.518:146:71:75:2774:2568	.	.	.	.	.	.	.	.
+chr10	112570130	.	G	C	3514.54	.	AB=0.429245;ABP=12.2288;AC=2;AF=0.5;AN=4;AO=91;CIGAR=1X;DP=549;DPB=212;DPRA=0;EPP=4.94315;EPPR=3.02825;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=42;NS=1;NUMALT=1;ODDS=511.098;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3424;QR=4579;RO=121;RPL=28;RPP=32.2417;RPPR=36.1926;RPR=63;RUN=1;SAF=44;SAP=3.22506;SAR=47;SF=0,11;SRF=65;SRP=4.46393;SRR=56;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	0/1:-232.564,0,-331.649:212:121:91:3424:4579:121,91	.	.	.	.	.	.	.	.	.	.	0/1:-497.391,0,-348.985:337:145:190:6931:5200	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr10	112570243	.	T	C	3693.13	.	AB=0;ABP=0;AC=32;AF=1;AN=54;AO=108;CIGAR=1X;DP=6457;DPB=109;DPRA=0;EPP=21.1059;EPPR=5.18177;GTI=0;LEN=1;MEANALT=1;MQM=41.8148;MQMR=42;NS=1;NUMALT=1;ODDS=148.729;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=3933;QR=19;RO=1;RPL=73;RPP=32.0437;RPPR=5.18177;RPR=35;RUN=1;SAF=52;SAP=3.332;SAR=56;SF=1,2,3,4,6,7,8,9,10,14,15,16,19,20,21,22,25,26,28,29,30,31,32,33,34,35,36;SRF=0;SRP=5.18177;SRR=1;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	1/1:-339.303,-30.9144,0:109:1:108:3933:19	0/1:-390.134,0,-281.217:266:113:152:5430:4171	0/1:-331.16,0,-347.591:259:132:127:4721:4920:132,127	1/1:-1126.58,-107.167,0:357:0:356:13024:0	.	0/1:-221.934,0,-273.522:194:104:90:3222:3829:104,90	0/1:-394.442,0,-438.991:327:166:159:5674:6257	0/1:-237.459,0,-265.81:194:100:94:3411:3777	0/1:-259.045,0,-296.277:221:115:105:3741:4199:115,105	0/1:-354.305,0,-289.018:253:114:138:4974:4219:114,138	.	.	.	0/1:-151.803,0,-258.045:160:98:62:2306:3535	0/1:-250.076,0,-367.095:245:140:105:3742:5106	0/1:-318.615,0,-378.772:269:143:126:4628:5316:143,126	.	.	0/1:-314.424,0,-423.871:287:159:127:4617:5913	1/1:-1068.08,-102.651,0:345:0:341:12362:0:0,341	0/1:-250.826,0,-44.013:117:24:92:3288:912:24,92	1/1:-351.149,-31.8374,0:114:1:112:4066:38	.	.	0/1:-454.299,0,-589.458:418:228:188:6707:8243:228,188	1/1:-963.299,-96.9317,0:325:0:322:11117:0	.	0/1:-210.914,0,-249.926:184:100:84:3061:3532	0/1:-463.785,0,-443.287:371:179:190:6643:6408	0/1:-258.045,0,-231.534:187:89:98:3643:3353	0/1:-204.41,0,-179.275:155:74:81:2884:2653	0/1:-322.072,0,-290.764:238:112:124:4528:4191	0/1:-256.382,0,-338.58:235:128:107:3789:4726	0/1:-280.052,0,-266.93:215:108:107:3976:3885	0/1:-212.643,0,-156.044:139:61:78:2949:2281	0/1:-338.253,0,-356.031:273:139:132:4839:5056
+chr10	112572458	.	G	C	12987.51	.	AB=0;ABP=0;AC=74;AF=1;AN=74;AO=443;CIGAR=1X;DP=15370;DPB=443;DPRA=0;EPP=3.40734;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=41.8284;MQMR=0;NS=1;NUMALT=1;ODDS=618.734;PAIRED=0.995485;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=16180;QR=0;RO=0;RPL=213;RPP=4.4269;RPPR=0;RPR=230;RUN=1;SAF=203;SAP=9.72079;SAR=240;SF=0,1,2,3,4,5,6,7,8,9,10,11,12,13,14,15,16,17,18,19,20,21,22,23,24,25,26,27,28,29,30,31,32,33,34,35,36;SRF=0;SRP=0;SRR=0;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	1/1:-1400.98,-133.356,0:443:0:443:16180:0:0,443	1/1:-572.441,-54.4864,0:181:0:181:6599:0	1/1:-1260.15,-121.315,0:404:0:403:14545:0	1/1:-1325.75,-125.831,0:419:0:418:15310:0:0,418	1/1:-1447.33,-136.668,0:455:0:454:16744:0	1/1:-1712.04,-162.556,0:544:0:540:19773:0:0,540	1/1:-1179.34,-111.682,0:371:0:371:13619:0:0,371	1/1:-1896.29,-181.22,0:602:0:602:21919:0	1/1:-1083.96,-102.651,0:341:0:341:12535:0	1/1:-1208.74,-116.499,0:387:0:387:13976:0:0,387	1/1:-1444.32,-137.872,0:459:0:458:16711:0:0,458	1/1:-1522.24,-149.01,0:497:0:495:17556:0	1/1:-1856.46,-176.705,0:588:0:587:21472:0:0,587	1/1:-1559.56,-151.117,0:503:0:502:17984:0	1/1:-1054.8,-100.845,0:336:0:335:12193:0	1/1:-1330.82,-127.336,0:424:0:423:15368:0	1/1:-1405.54,-131.851,0:439:0:438:16217:0:0,438	1/1:-1526.59,-144.494,0:480:0:480:17603:0	1/1:-883.024,-84.2884,0:282:0:280:10177:0	1/1:-1428.2,-136.668,0:454:0:454:16467:0	1/1:-1571.94,-149.01,0:495:0:495:18139:0:0,495	1/1:-779.715,-75.5585,0:251:0:251:9005:0:0,251	1/1:-738.344,-71.6451,0:238:0:238:8506:0	1/1:-1499.8,-141.183,0:469:0:469:17335:0	1/1:-822.302,-78.2678,0:260:0:260:9468:0:0,260	1/1:-2039.8,-196.874,0:654:0:654:23538:0:0,654	1/1:-1424.3,-139.979,0:466:0:465:16440:0	1/1:-1501.9,-143.118,0:481:1:479:17342:16:1,479	1/1:-963.568,-94.4296,0:319:1:318:11102:16	1/1:-1694.68,-165.247,0:559:2:556:19547:31	1/1:-1185.19,-112.585,0:375:0:374:13680:0	1/1:-910.496,-86.3956,0:287:0:287:10499:0	1/1:-1440.13,-137.27,0:457:0:456:16602:0	1/1:-1088.68,-103.554,0:346:0:344:12567:0	1/1:-1159.36,-110.177,0:366:0:366:13367:0	1/1:-815.448,-77.0637,0:258:0:256:9394:0	1/1:-1515.19,-144.193,0:480:0:479:17474:0
+chr10	112579854	.	A	G	2950.14	.	AB=0.519824;ABP=3.78514;AC=1;AF=0.5;AN=2;AO=118;CIGAR=1X;DP=227;DPB=227;DPRA=0;EPP=4.18805;EPPR=3.03022;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=41.9633;NS=1;NUMALT=1;ODDS=632.207;PAIRED=0.983051;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=4273;QR=4073;RO=109;RPL=52;RPP=6.61715;RPPR=22.1551;RPR=66;RUN=1;SAF=67;SAP=7.72129;SAR=51;SF=17;SRF=69;SRP=19.7645;SRR=40;TYPE=snp	GT:GL:DP:RO:AO:QA:QR	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-302.717,0,-284.876:227:109:118:4273:4073	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr10	112590810	.	G	C	8468.76	.	AB=0;ABP=0;AC=74;AF=1;AN=74;AO=263;CIGAR=1X;DP=9984;DPB=263;DPRA=0;EPP=6.65144;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=41.8631;MQMR=0;NS=1;NUMALT=1;ODDS=369.201;PAIRED=0.992395;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=9979;QR=0;RO=0;RPL=65;RPP=149.06;RPPR=0;RPR=198;RUN=1;SAF=136;SAP=3.67908;SAR=127;SF=0,1,2,3,4,5,6,7,8,9,10,11,12,13,14,15,16,17,18,19,20,21,22,23,24,25,26,27,28,29,30,31,32,33,34,35,36;SRF=0;SRP=0;SRR=0;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	1/1:-859.248,-79.1709,0:263:0:263:9979:0:0,263	1/1:-403.978,-37.0267,0:123:0:123:4694:0	1/1:-1082.72,-102.638,0:344:1:342:12610:16	1/1:-860.428,-79.773,0:265:0:265:10000:0:0,265	1/1:-951.689,-88.8039,0:296:0:295:11085:0	1/1:-1023.86,-96.6306,0:323:0:321:11918:0:0,321	1/1:-675.658,-63.2163,0:211:0:210:7849:0:0,210	1/1:-1121.39,-105.963,0:352:0:352:13046:0	1/1:-797.462,-74.3544,0:247:0:247:9239:0	1/1:-790.472,-73.7524,0:245:0:245:9156:0:0,245	1/1:-888.244,-83.0843,0:276:0:276:10330:0:0,276	1/1:-1057.69,-100.544,0:334:0:334:12236:0	1/1:-1295.21,-120.079,0:404:1:403:15116:16:1,403	1/1:-947.039,-89.4059,0:297:0:297:10957:0	1/1:-760.085,-71.9462,0:239:0:239:8871:0	1/1:-921.57,-88.2018,0:293:0:293:10714:0	1/1:-781.564,-72.5482,0:241:0:241:9132:0:0,241	1/1:-1084.43,-101.447,0:337:0:337:12596:0	1/1:-654.67,-60.206,0:202:0:200:7586:0	1/1:-937.394,-88.2018,0:293:0:293:10867:0	1/1:-1123.69,-104.758,0:348:0:348:13047:0:0,348	1/1:-494.445,-46.6597,0:155:0:155:5705:0:0,155	1/1:-475.631,-45.7566,0:152:0:152:5514:0	1/1:-1020.16,-95.1255,0:316:0:316:11903:0	1/1:-460.413,-43.0473,0:145:0:143:5326:0:0,143	1/1:-1208.36,-112.585,0:374:0:374:13985:0:0,374	1/1:-1032.04,-99.0389,0:330:0:329:11962:0	1/1:-1245.01,-118.004,0:392:0:392:14456:0:0,392	1/1:-547.845,-53.2823,0:177:0:177:6355:0	1/1:-1168.05,-112.585,0:376:0:374:13595:0	1/1:-802.309,-75.2575,0:250:0:250:9284:0	1/1:-647.93,-60.206,0:201:0:200:7503:0	1/1:-841.437,-79.4719,0:267:0:264:9767:0	1/1:-831.879,-77.3707,0:262:1:261:9683:15	1/1:-653.479,-59.905,0:199:0:199:7571:0	1/1:-565.619,-52.6803,0:175:0:175:6562:0	1/1:-899.652,-84.2884,0:280:0:280:10477:0
+chr10	112595719	.	G	C	2093.60	.	AB=0.5;ABP=3.0103;AC=66;AF=0.5;AN=74;AO=33;CIGAR=1X;DP=2907;DPB=66;DPRA=0;EPP=6.23461;EPPR=6.23461;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=42;NS=1;NUMALT=1;ODDS=173.651;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1210;QR=1238;RO=33;RPL=5;RPP=37.8197;RPPR=14.1309;RPR=28;RUN=1;SAF=19;SAP=4.65535;SAR=14;SF=0,1,2,3,4,5,6,7,8,9,10,11,12,13,14,15,16,17,18,19,20,21,22,23,24,25,26,27,28,29,30,31,32,33,34,35,36;SRF=18;SRP=3.60252;SRR=15;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	0/1:-85.1801,0,-87.7513:66:33:33:1210:1238:33,33	1/1:-91.5985,-8.42884,0:28:0:28:1059:0	1/1:-227.622,-21.6742,0:72:0:72:2624:0	1/1:-251.352,-23.1793,0:77:0:77:2913:0:0,77	0/1:-149.184,0,-151.984:113:57:56:2119:2147	0/1:-113.14,0,-163.251:106:61:45:1676:2280:61,45	1/1:-250.45,-23.4803,0:78:0:78:2911:0:0,78	1/1:-303.309,-28.2968,0:94:0:94:3533:0	1/1:-264.439,-24.6845,0:82:0:82:3060:0	1/1:-234.213,-21.3731,0:71:0:71:2709:0:0,71	1/1:-243.903,-23.4803,0:78:0:78:2850:0:0,78	1/1:-261.746,-24.3834,0:82:0:81:3020:0	1/1:-448.202,-42.1442,0:140:0:140:5210:0:0,140	1/1:-318.888,-29.5009,0:98:0:98:3688:0	1/1:-178.874,-16.8577,0:56:0:56:2095:0	0/1:-98.3582,0,-88.5681:73:35:38:1387:1287	0/1:-138.581,0,-125.345:98:47:51:1947:1786:47,51	1/1:-383.081,-32.8439,0:121:1:120:4488:37	1/1:-127.506,-11.7402,0:39:0:39:1474:0	1/1:-297.063,-27.3937,0:91:0:91:3441:0	0/1:-83.7345,0,-133.394:83:49:34:1255:1824:49,34	1/1:-126.708,-11.4391,0:38:0:38:1466:0:0,38	1/1:-114.103,-10.5361,0:35:0:35:1317:0	1/1:-288.23,-26.4906,0:88:0:88:3358:0	1/1:-126.399,-11.4391,0:38:0:38:1462:0:0,38	1/1:-400.096,-35.7294,0:124:1:123:4662:16:1,123	1/1:-302.715,-29.5009,0:98:0:98:3498:0	1/1:-268.205,-25.2865,0:84:0:84:3097:0:0,84	1/1:-246.09,-22.8783,0:76:0:76:2844:0	1/1:-366.344,-35.8226,0:119:0:119:4255:0	1/1:-186.733,-17.4597,0:59:0:58:2160:0	1/1:-157.548,-15.0515,0:50:0:50:1818:0	1/1:-274.591,-25.2865,0:84:0:84:3177:0	1/1:-228.272,-21.3731,0:71:0:71:2639:0	0/1:-65.1227,0,-117.834:70:43:27:995:1607	1/1:-130.24,-12.0412,0:40:0:40:1505:0	0/1:-140.395,0,-81.561:87:33:54:1921:1240
+chr10	121411171	.	G	A	427.65	.	AB=0.490196;ABP=3.05288;AC=1;AF=0.5;AN=2;AO=25;CIGAR=1X;DP=51;DPB=51;DPRA=0;EPP=17.6895;EPPR=15.0369;GTI=0;LEN=1;MEANALT=1;MQM=41.24;MQMR=42;NS=1;NUMALT=1;ODDS=98.4704;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=838;QR=864;RO=26;RPL=0;RPP=57.2971;RPPR=59.4686;RPR=25;RUN=1;SAF=19;SAP=17.6895;SAR=6;SF=11;SRF=19;SRP=15.0369;SRR=7;TYPE=snp	GT:GL:DP:RO:AO:QA:QR	.	.	.	.	.	.	.	.	.	.	.	0/1:-57.8041,0,-60.6674:51:26:25:838:864	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr10	121429394	.	G	A	3578.57	.	AB=0;ABP=0;AC=2;AF=1;AN=2;AO=120;CIGAR=1X;DP=121;DPB=121;DPRA=0;EPP=4.16842;EPPR=0;GTI=0;LEN=1;MEANALT=2;MQM=41.8333;MQMR=0;NS=1;NUMALT=1;ODDS=170.96;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=4328;QR=0;RO=0;RPL=20;RPP=118.822;RPPR=0;RPR=100;RUN=1;SAF=76;SAP=21.5402;SAR=44;SF=9;SRF=0;SRP=0;SRR=0;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	1/1:-375.763,-36.1236,0:121:0:120:4328:0:0,120	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr10	121429633	.	T	C	3862.00	.	AB=0.474359;ABP=3.90116;AC=13;AF=0.5;AN=26;AO=74;CIGAR=1X;DP=4377;DPB=156;DPRA=0;EPP=3.0103;EPPR=18.2636;GTI=0;LEN=1;MEANALT=1;MQM=41.973;MQMR=41.9756;NS=1;NUMALT=1;ODDS=406.779;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=2697;QR=3026;RO=82;RPL=41;RPP=4.88833;RPPR=9.78953;RPR=33;RUN=1;SAF=18;SAP=45.3834;SAR=56;SF=1,2,5,7,10,12,13,21,23,24,27,28,33;SRF=18;SRP=59.0449;SRR=64;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	0/1:-187.615,0,-215.093:156:82:74:2697:3026	0/1:-407.22,0,-435.186:357:183:173:5948:6260	.	.	0/1:-546.59,0,-623.522:460:239:220:7943:8813:239,220	.	0/1:-503.025,0,-578.057:440:231:205:7312:8220	.	.	0/1:-388.986,0,-427.769:326:168:156:5649:6090:168,156	.	0/1:-587.067,0,-695.337:522:276:242:8568:9846:276,242	0/1:-491.272,0,-404.109:377:173:200:6943:5966	.	.	.	.	.	.	.	0/1:-86.468,0,-267.345:151:105:45:1505:3586:105,45	.	0/1:-517.002,0,-500.255:400:193:206:7366:7165	0/1:-155.464,0,-186.829:138:74:61:2259:2626:74,61	.	.	0/1:-573.239,0,-536.352:463:225:234:8270:7812:225,234	0/1:-317.139,0,-397.285:304:164:137:4706:5651	.	.	.	.	0/1:-396.852,0,-320.088:283:128:155:5587:4667	.	.	.
+chr10	121432002	.	A	G	5248.37	.	AB=0.565217;ABP=16.6056;AC=1;AF=0.5;AN=2;AO=208;CIGAR=1X;DP=368;DPB=368;DPRA=0;EPP=5.68288;EPPR=3.49888;GTI=0;LEN=1;MEANALT=1;MQM=41.7067;MQMR=41.5375;NS=1;NUMALT=1;ODDS=891.696;PAIRED=0.985577;PAIREDR=0.98125;PAO=0;PQA=0;PQR=0;PRO=0;QA=7436;QR=5876;RO=160;RPL=92;RPP=9.02361;RPPR=6.48466;RPR=116;RUN=1;SAF=102;SAP=3.17734;SAR=106;SF=4;SRF=79;SRP=3.06459;SRR=81;TYPE=snp	GT:GL:DP:RO:AO:QA:QR	.	.	.	.	0/1:-534.234,0,-396.002:368:160:208:7436:5876	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr10	121432040	.	C	T	2418.44	.	AB=0.525253;ABP=4.107;AC=1;AF=0.5;AN=2;AO=104;CIGAR=1X;DP=198;DPB=198;DPRA=0;EPP=3.76196;EPPR=3.03365;GTI=0;LEN=1;MEANALT=2;MQM=41.6442;MQMR=41.8065;NS=1;NUMALT=1;ODDS=489.593;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3560;QR=3198;RO=93;RPL=55;RPP=3.76196;RPPR=3.59403;RPR=49;RUN=1;SAF=38;SAP=19.3799;SAR=66;SF=18;SRF=41;SRP=5.83555;SRR=52;TYPE=snp	GT:GL:DP:RO:AO:QA:QR	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-250.335,0,-219.597:198:93:104:3560:3198	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr10	121436068	.	T	G	4999.16	.	AB=0.525547;ABP=5.34027;AC=6;AF=0.5;AN=12;AO=216;CIGAR=1X;DP=2435;DPB=411;DPRA=0;EPP=41.6545;EPPR=22.755;GTI=0;LEN=1;MEANALT=2;MQM=41.5093;MQMR=41.6186;NS=1;NUMALT=1;ODDS=1061.54;PAIRED=0.986111;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=7735;QR=6869;RO=194;RPL=113;RPP=4.01561;RPPR=3.72666;RPR=103;RUN=1;SAF=116;SAP=5.5839;SAR=100;SF=2,3,6,14,25,26;SRF=91;SRP=4.62211;SRR=103;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	0/1:-545.379,0,-470.62:411:194:216:7735:6869	0/1:-398.921,0,-520.774:355:197:158:5835:7259:197,158	.	.	0/1:-393.779,0,-345.562:288:137:151:5530:5005:137,151	.	.	.	.	.	.	.	0/1:-431.67,0,-399.68:324:158:166:6097:5724	.	.	.	.	.	.	.	.	.	.	0/1:-745.297,0,-743.173:587:293:293:10638:10605:293,293	0/1:-553.549,0,-600.222:470:240:229:8022:8537	.	.	.	.	.	.	.	.	.	.
+chr10	121436286	.	C	T	2138.67	.	AB=0.502732;ABP=3.02217;AC=6;AF=0.5;AN=12;AO=92;CIGAR=1X;DP=1192;DPB=183;DPRA=0;EPP=7.63648;EPPR=3.03416;GTI=0;LEN=1;MEANALT=1;MQM=40.8696;MQMR=41.9341;NS=1;NUMALT=1;ODDS=500.682;PAIRED=0.98913;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3327;QR=3407;RO=91;RPL=28;RPP=33.5997;RPPR=51.3315;RPR=64;RUN=1;SAF=63;SAP=30.2953;SAR=29;SF=2,3,6,14,25,26;SRF=61;SRP=25.942;SRR=30;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	0/1:-230.246,0,-239.681:183:91:92:3327:3407	0/1:-189.368,0,-264.231:180:103:77:2823:3701:103,77	.	.	0/1:-171.906,0,-159.611:131:64:67:2446:2290:64,67	.	.	.	.	.	.	.	0/1:-179.127,0,-258.793:166:95:71:2647:3570	.	.	.	.	.	.	.	.	.	.	0/1:-352.776,0,-368.858:286:145:138:5106:5272:145,138	0/1:-237.666,0,-359.043:246:142:104:3595:5048	.	.	.	.	.	.	.	.	.	.
+chr10	121436362	.	A	G	6183.63	.	AB=0.461832;ABP=6.32553;AC=59;AF=0.5;AN=74;AO=121;CIGAR=1X;DP=10015;DPB=262;DPRA=0;EPP=14.2266;EPPR=5.61299;GTI=0;LEN=1;MEANALT=1;MQM=41.6612;MQMR=41.0355;NS=1;NUMALT=1;ODDS=638.667;PAIRED=1;PAIREDR=0.985816;PAO=0;PQA=0;PQR=0;PRO=0;QA=4210;QR=5200;RO=141;RPL=60;RPP=3.02825;RPPR=4.87376;RPR=61;RUN=1;SAF=74;SAP=16.093;SAR=47;SF=0,1,2,3,4,5,6,7,8,9,10,11,12,13,14,15,16,17,18,19,20,21,22,23,24,25,26,27,28,29,30,31,32,33,34,35,36;SRF=84;SRP=14.2373;SRR=57;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	0/1:-286.859,0,-363.765:262:141:121:4210:5200:141,121	1/1:-316.482,-30.7051,0:102:0:102:3644:0	1/1:-772.324,-77.6657,0:258:0:258:8925:0	1/1:-753.938,-74.0534,0:246:0:246:8718:0:0,246	0/1:-363.645,0,-442.64:321:173:146:5323:6210	0/1:-404.403,0,-431.342:333:172:161:5825:6156:172,161	0/1:-268.818,0,-197.719:186:83:103:3752:2923:83,103	1/1:-1174.6,-114.692,0:382:0:381:13546:0	0/1:-306.692,0,-260.2:223:103:119:4324:3778	1/1:-816.069,-76.8143,0:265:1:264:9491:30:1,264	1/1:-662.555,-64.7215,0:215:0:215:7685:0:0,215	1/1:-1179.84,-114.49,0:398:2:394:13661:53	0/1:-482.371,0,-575.794:417:222:194:7066:8076:222,194	0/1:-439.406,0,-401.984:343:168:175:6263:5823	1/1:-649.158,-64.1194,0:213:0:213:7467:0	0/1:-435.301,0,-398.186:336:159:174:6190:5788	1/1:-965.689,-92.1884,0:313:1:311:11172:19:1,311	1/1:-1019.27,-97.4399,0:329:1:328:11845:16	1/1:-474.96,-47.1181,0:159:1:158:5495:16	1/1:-990.69,-96.6306,0:322:0:321:11543:0	1/1:-993.55,-96.6306,0:321:0:321:11532:0:0,321	0/1:-300.154,0,-84.2072:160:46:114:4005:1511:46,114	0/1:-165.835,0,-199.036:159:86:73:2465:2824	1/1:-980.978,-87.192,0:326:3:320:11445:115	0/1:-187.847,0,-183.505:151:75:75:2689:2626:75,75	1/1:-1201.84,-118.004,0:393:0:392:13926:0:0,392	1/1:-940.502,-97.2327,0:325:0:323:10875:0	1/1:-998.368,-99.6409,0:331:0:331:11596:0:0,331	1/1:-616.68,-62.6142,0:208:0:208:7123:0	0/1:-478.147,0,-496.975:411:207:202:6964:7155	1/1:-839.038,-81.2781,0:270:0:270:9677:0	1/1:-603.33,-61.4101,0:204:0:204:6917:0	0/1:-290.876,0,-363.58:266:144:122:4263:5106	1/1:-639.522,-61.7558,0:215:2:213:7395:32	1/1:-679.305,-65.3235,0:217:0:217:7873:0	0/1:-200.445,0,-212.513:167:83:84:2885:3037	0/1:-339.23,0,-332.309:268:131:137:4852:4752
+chr11	2608850	.	G	T	862.09	.	AB=0.45679;ABP=4.32391;AC=1;AF=0.5;AN=2;AO=37;CIGAR=1X;DP=81;DPB=81;DPRA=0;EPP=3.06899;EPPR=4.78696;GTI=0;LEN=1;MEANALT=1;MQM=41.8919;MQMR=42;NS=1;NUMALT=1;ODDS=198.504;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1341;QR=1649;RO=44;RPL=19;RPP=3.06899;RPPR=4.78696;RPR=18;RUN=1;SAF=19;SAP=3.06899;SAR=18;SF=9;SRF=22;SRP=3.0103;SRR=22;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	0/1:-92.065,0,-118.426:81:44:37:1341:1649:44,37	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr11	2683177	.	C	T	3266.14	.	AB=0.487365;ABP=3.39442;AC=1;AF=0.5;AN=2;AO=135;CIGAR=1X;DP=277;DPB=277;DPRA=0;EPP=7.65886;EPPR=16.7732;GTI=0;LEN=1;MEANALT=1;MQM=41.8148;MQMR=41.9859;NS=1;NUMALT=1;ODDS=752.057;PAIRED=1;PAIREDR=0.992958;PAO=0;PQA=0;PQR=0;PRO=0;QA=4975;QR=5215;RO=142;RPL=24;RPP=124.758;RPPR=116.11;RPR=111;RUN=1;SAF=77;SAP=8.81698;SAR=58;SF=8;SRF=80;SRP=7.96493;SRR=62;TYPE=snp	GT:GL:DP:RO:AO:QA:QR	.	.	.	.	.	.	.	.	0/1:-347.589,0,-370.096:277:142:135:4975:5215	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr11	2790163	.	T	C	5268.82	.	AB=0.487476;ABP=3.71739;AC=8;AF=0.5;AN=16;AO=253;CIGAR=1X;DP=3665;DPB=519;DPRA=0;EPP=9.26723;EPPR=7.71244;GTI=0;LEN=1;MEANALT=1;MQM=41.7708;MQMR=41.5414;NS=1;NUMALT=1;ODDS=1457.21;PAIRED=1;PAIREDR=0.981203;PAO=0;PQA=0;PQR=0;PRO=0;QA=9297;QR=9708;RO=266;RPL=169;RPP=65.0217;RPPR=66.2279;RPR=84;RUN=1;SAF=120;SAP=4.46081;SAR=133;SF=3,8,11,21,22,23,27,29;SRF=120;SRP=8.52878;SRR=146;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	0/1:-647.349,0,-680.858:519:266:253:9297:9708:266,253	.	.	.	.	0/1:-539.208,0,-622.299:444:233:211:7763:8741	.	.	0/1:-554.31,0,-821.396:542:312:230:8271:11417	.	.	.	.	.	.	.	.	.	0/1:-87.985,0,-381.027:185:140:45:1650:5055:140,45	0/1:-217.281,0,-271.651:193:106:87:3171:3805	0/1:-747.297,0,-843.497:609:317:291:10743:11892	.	.	.	0/1:-720.039,0,-601.936:518:242:276:10147:8760:242,276	.	0/1:-818.901,0,-830.454:655:322:330:11779:11854	.	.	.	.	.	.	.
+chr11	2797237	.	G	A	6459.81	.	AB=0.507937;ABP=3.25157;AC=13;AF=0.5;AN=24;AO=224;CIGAR=1X;DP=5519;DPB=441;DPRA=0;EPP=42.7172;EPPR=32.3252;GTI=0;LEN=1;MEANALT=2;MQM=42;MQMR=41.9028;NS=1;NUMALT=1;ODDS=1221.27;PAIRED=0.991071;PAIREDR=0.99537;PAO=0;PQA=0;PQR=0;PRO=0;QA=8139;QR=7749;RO=216;RPL=144;RPP=42.7172;RPPR=13.3047;RPR=80;RUN=1;SAF=114;SAP=3.16541;SAR=110;SF=0,1,2,6,8,10,19,23,24,25,26,29;SRF=109;SRP=3.05051;SRR=107;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	0/1:-574.668,0,-541.62:441:216:224:8139:7749:216,224	0/1:-207.821,0,-230.525:170:88:82:2985:3241	0/1:-579.839,0,-626.03:481:250:230:8377:8847	.	.	.	0/1:-368.983,0,-373.93:294:150:144:5269:5334:150,144	.	0/1:-515.835,0,-608.945:449:239:209:7519:8565	.	0/1:-643.134,0,-625.098:506:247:256:9238:8954:247,256	.	.	.	.	.	.	.	.	1/1:-1715.79,-160.811,0:554:2:549:19917:56	.	.	.	0/1:-841.66,0,-678.296:596:279:317:11830:9876	0/1:-215.785,0,-216.999:169:86:83:3073:3069:86,83	0/1:-816.213,0,-853.958:663:336:327:11734:12149:336,327	0/1:-645.674,0,-697.143:550:282:268:9374:9922	.	.	0/1:-760.177,0,-796.965:646:332:310:11018:11437	.	.	.	.	.	.	.
+chr11	2797320	.	A	G	4482.63	.	AB=0.51751;ABP=3.69469;AC=46;AF=0.5;AN=68;AO=133;CIGAR=1X;DP=8713;DPB=257;DPRA=0;EPP=36.0722;EPPR=66.053;GTI=0;LEN=1;MEANALT=1;MQM=41.6917;MQMR=42;NS=1;NUMALT=1;ODDS=696.637;PAIRED=0.992481;PAIREDR=0.983871;PAO=0;PQA=0;PQR=0;PRO=0;QA=4762;QR=4584;RO=124;RPL=90;RPP=39.0763;RPPR=36.9133;RPR=43;RUN=1;SAF=72;SAP=4.98585;SAR=61;SF=0,1,3,4,5,6,7,8,9,11,12,13,14,15,16,17,18,20,21,22,23,24,25,26,27,28,29,30,31,32,33,34,35,36;SRF=64;SRP=3.29049;SRR=60;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	0/1:-336.278,0,-319.337:257:124:133:4762:4584:124,133	0/1:-121.665,0,-161.545:110:61:49:1773:2245	.	0/1:-326.928,0,-259.778:226:102:124:4536:3801:102,124	1/1:-1064.46,-105.059,0:349:0:349:12248:0	1/1:-998.251,-92.1605,0:329:2:326:11573:74:2,326	0/1:-257.61,0,-243.918:199:94:105:3647:3510:94,105	0/1:-463.836,0,-470.886:369:181:188:6647:6764	0/1:-295.49,0,-328.516:242:126:116:4247:4642	1/1:-638.844,-60.9818,0:208:1:206:7397:15:1,206	.	1/1:-909.203,-88.8039,0:296:0:295:10498:0	0/1:-413.166,0,-532:370:202:168:6038:7437:202,168	0/1:-320.199,0,-337.701:261:132:129:4577:4875	1/1:-587.632,-55.9916,0:186:0:186:6771:0	0/1:-424.241,0,-489.505:361:187:174:6155:6915	0/1:-370.964,0,-329.809:274:127:145:5248:4763:127,145	1/1:-1141.95,-110.478,0:367:0:367:13159:0	1/1:-485.444,-44.3186,0:157:2:155:5611:31	.	0/1:-404.267,0,-521.429:368:201:166:5927:7357:201,166	1/1:-333.385,-32.5112,0:108:0:108:3834:0:0,108	1/1:-239.595,-24.0824,0:81:0:80:2760:0	0/1:-397.326,0,-481.587:343:183:160:5772:6815	0/1:-118.057,0,-136.121:99:51:47:1691:1917:51,47	0/1:-439.565,0,-584.544:408:223:184:6467:8205:223,184	0/1:-421.491,0,-426.976:351:173:176:6054:6175	1/1:-867.604,-85.1915,0:284:0:283:10017:0:0,283	1/1:-722.109,-74.0534,0:246:0:246:8291:0	0/1:-539.411,0,-438.804:409:184:222:7632:6507	0/1:-227.738,0,-306.251:211:117:94:3342:4267	0/1:-262.998,0,-183.624:181:75:106:3636:2764	0/1:-307.15,0,-364.169:265:140:125:4454:5130	0/1:-324.422,0,-307.662:249:120:129:4583:4414	1/1:-528.342,-48.8984,0:172:1:171:6119:29	0/1:-126.219,0,-139.797:103:53:50:1804:1973	0/1:-396.754,0,-294.914:274:121:152:5527:4380
+chr11	2798305	.	T	C	6751.47	.	AB=0.43908;ABP=17.0325;AC=18;AF=0.5;AN=32;AO=191;CIGAR=1X;DP=7490;DPB=435;DPRA=0;EPP=5.56832;EPPR=8.1364;GTI=0;LEN=1;MEANALT=1;MQM=41.9581;MQMR=41.5902;NS=1;NUMALT=1;ODDS=1071.06;PAIRED=1;PAIREDR=0.987705;PAO=0;PQA=0;PQR=0;PRO=0;QA=7089;QR=9061;RO=244;RPL=139;RPP=89.062;RPPR=167.615;RPR=52;RUN=1;SAF=81;SAP=12.5716;SAR=110;SF=3,4,5,6,9,11,20,21,22,24,25,26,27,28,29,36;SRF=114;SRP=5.28857;SRR=130;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	0/1:-483.781,0,-648.478:435:244:191:7089:9061:244,191	1/1:-1837.8,-171.85,0:578:1:575:21251:17	0/1:-955.608,0,-724.43:650:288:360:13307:10661:288,360	0/1:-519.158,0,-415.46:356:162:194:7230:6039:162,194	.	.	0/1:-576.451,0,-578.704:449:222:223:8208:8263:222,223	.	0/1:-576.813,0,-696.722:503:269:233:8397:9859	.	.	.	.	.	.	.	.	0/1:-769.403,0,-815.496:613:311:301:11007:11575:311,301	0/1:-259.241,0,-233.021:187:89:98:3636:3340:89,98	0/1:-231.197,0,-301.64:201:110:91:3363:4188	.	1/1:-658.246,-61.7112,0:205:0:205:7626:0:0,205	0/1:-874.872,0,-854.318:685:337:347:12475:12295:337,347	0/1:-734.258,0,-675.512:558:264:292:10429:9750	0/1:-765.114,0,-774.655:612:307:304:10974:11063:307,304	0/1:-407.958,0,-364.55:304:147:157:5774:5295	0/1:-779.871,0,-768.013:614:300:313:11129:10997	.	.	.	.	.	.	0/1:-744.939,0,-646.431:540:252:288:10594:9362
+chr11	2799299	.	G	T	2825.89	.	AB=0.474708;ABP=4.43823;AC=1;AF=0.5;AN=2;AO=122;CIGAR=1X;DP=257;DPB=257;DPRA=0;EPP=3.29508;EPPR=5.34382;GTI=0;LEN=1;MEANALT=2;MQM=40.8361;MQMR=41.6866;NS=1;NUMALT=1;ODDS=650.685;PAIRED=0.967213;PAIREDR=0.992537;PAO=0;PQA=0;PQR=0;PRO=0;QA=4341;QR=4913;RO=134;RPL=83;RPP=37.4691;RPPR=53.8292;RPR=39;RUN=1;SAF=52;SAP=8.77716;SAR=70;SF=8;SRF=60;SRP=6.18648;SRR=74;TYPE=snp	GT:GL:DP:RO:AO:QA:QR	.	.	.	.	.	.	.	.	0/1:-293.536,0,-346.639:257:134:122:4341:4913	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr11	6629665	.	C	T	7778.88	.	AB=0.470588;ABP=6.45911;AC=21;AF=0.5;AN=30;AO=216;CIGAR=1X;DP=5695;DPB=459;DPRA=0;EPP=52.2706;EPPR=32.0437;GTI=0;LEN=1;MEANALT=1;MQM=41.8889;MQMR=41.8436;NS=1;NUMALT=1;ODDS=1243.22;PAIRED=1;PAIREDR=0.995885;PAO=0;PQA=0;PQR=0;PRO=0;QA=8003;QR=9022;RO=243;RPL=125;RPP=14.6317;RPPR=21.1059;RPR=91;RUN=1;SAF=98;SAP=7.03155;SAR=118;SF=4,5,6,7,9,13,15,16,19,21,22,23,27,32,34;SRF=122;SRP=3.01924;SRR=121;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	0/1:-554.049,0,-642.613:459:243:216:8003:9022	0/1:-567.287,0,-585.169:446:224:221:8100:8294:224,221	1/1:-1049.84,-95.9865,0:331:1:330:12193:38:1,330	0/1:-785.907,0,-657.737:558:261:296:11039:9557	.	0/1:-389.649,0,-484.431:335:182:152:5679:6747:182,152	.	.	.	0/1:-641.084,0,-547.772:454:213:241:9002:7890	.	1/1:-1145.57,-108.371,0:362:0:360:13299:0	1/1:-1263.15,-114.802,0:393:1:392:14690:36:1,392	.	.	1/1:-1247.17,-113.747,0:390:1:389:14469:38	.	0/1:-99.5507,0,-330.85:175:126:49:1759:4421:126,49	0/1:-234.663,0,-238.687:187:94:93:3349:3394	1/1:-1422.61,-132.453,0:440:0:440:16452:0	.	.	.	1/1:-1632.45,-155.633,0:518:0:517:18929:0:0,517	.	.	.	.	0/1:-439.984,0,-455.227:344:175:169:6301:6436	.	0/1:-356.491,0,-430.12:303:164:138:5190:6026	.	.
+chr11	6630028	.	TCCCCCAT	TCCCCAT	10136.99	.	AB=0;ABP=0;AC=74;AF=1;AN=74;AO=312;CIGAR=1M1D6M;DP=12317;DPB=273.375;DPRA=0;EPP=10.1372;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=41.8622;MQMR=0;NS=1;NUMALT=1;ODDS=441.288;PAIRED=1;PAIREDR=0;PAO=1.5;PQA=42;PQR=42;PRO=1.5;QA=11271;QR=0;RO=0;RPL=140;RPP=10.1372;RPPR=0;RPR=172;RUN=1;SAF=150;SAP=4.01252;SAR=162;SF=0,1,2,3,4,5,6,7,8,9,10,11,12,13,14,15,16,17,18,19,20,21,22,23,24,25,26,27,28,29,30,31,32,33,34,35,36;SRF=0;SRP=0;SRR=0;TYPE=del	GT:GL:DP:RO:AO:QA:QR:AD	1/1:-978.774,-95.7275,0:312:0:312:11271:0:0,312	1/1:.,.,0:130:0:129:4700:0	1/1:.,.,0:329:0:322:11184:0	1/1:-1029.81,-100.243,0:339:0:333:11868:0:0,333	1/1:.,.,0:384:0:381:13745:0	1/1:-1160.02,-112.886,0:376:0:373:13376:0:0,373	1/1:-833.129,-82.7833,0:273:0:271:9579:0:0,271	1/1:.,.,0:414:0:411:14354:0	1/1:.,.,0:315:0:312:11030:0	1/1:-1073.6,-105.963,0:354:0:348:12361:0:0,348	1/1:-805.216,-77.6657,0:263:0:258:9279:0:0,258	1/1:.,.,0:458:0:451:15188:0	1/1:-1424.02,-137.872,0:461:0:458:16420:0:0,458	1/1:.,.,0:439:0:432:14760:0	1/1:.,.,0:294:0:290:10276:0	1/1:.,.,0:408:0:407:14162:0	1/1:-1095.21,-106.866,0:357:0:353:12624:0:0,353	1/1:.,.,0:314:0:312:11135:0	1/1:.,.,0:241:0:237:8471:0	1/1:.,.,0:360:0:356:12763:0	1/1:-1289.73,-125.831,0:430:0:418:14874:0:0,418	1/1:-520.49,-51.7772,0:175:0:172:5980:0:0,172	1/1:.,.,0:219:0:217:7527:0	1/1:.,.,0:397:0:392:14074:0	1/1:-543.192,-53.2823,0:178:0:177:6249:0:0,177	1/1:-1480.98,-147.806,0:493:0:487:17035:0:0,487	1/1:.,.,0:445:0:431:14631:0	1/1:-1283,-130.346,0:442:0:431:14761:0:0,431	1/1:.,.,0:243:0:238:7977:0	1/1:.,.,0:479:0:469:15710:0	1/1:.,.,0:274:0:273:9527:0	1/1:.,.,0:224:0:217:7278:0	1/1:.,.,0:348:0:343:12224:0	1/1:.,.,0:326:0:325:11359:0	1/1:.,.,0:259:0:258:9154:0	1/1:.,.,0:204:0:202:7260:0	1/1:.,.,0:360:0:358:12812:0
+chr11	6630223	.	G	C	5378.60	.	AB=0.532338;ABP=6.66183;AC=1;AF=0.5;AN=2;AO=214;CIGAR=1X;DP=402;DPB=402;DPRA=0;EPP=4.02501;EPPR=3.5793;GTI=0;LEN=1;MEANALT=2;MQM=41.4393;MQMR=41.7005;NS=1;NUMALT=1;ODDS=1075.07;PAIRED=0.990654;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=7779;QR=6889;RO=187;RPL=142;RPP=52.7309;RPPR=12.7761;RPR=72;RUN=1;SAF=108;SAP=3.05089;SAR=106;SF=15;SRF=99;SRP=4.41537;SRR=88;TYPE=snp	GT:GL:DP:RO:AO:QA:QR	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-550.59,0,-475.567:402:187:214:7779:6889	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr11	6630410	.	T	C	3732.22	.	AB=0.482456;ABP=3.31507;AC=12;AF=0.5;AN=22;AO=55;CIGAR=1X;DP=3169;DPB=114;DPRA=0;EPP=4.94488;EPPR=43.0905;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=42;NS=1;NUMALT=1;ODDS=292.611;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1962;QR=2229;RO=59;RPL=31;RPP=4.94488;RPPR=16.2968;RPR=24;RUN=1;SAF=41;SAP=31.7922;SAR=14;SF=1,3,10,18,20,21,26,29,31,33,36;SRF=34;SRP=5.99147;SRR=25;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	0/1:-136.476,0,-158.476:114:59:55:1962:2229	.	0/1:-393.53,0,-344.87:287:134:153:5520:4999:134,153	.	.	.	.	.	.	0/1:-371.67,0,-371.986:287:140:146:5264:5307:140,146	.	.	.	.	.	.	.	0/1:-250.082,0,-226.596:188:88:100:3538:3274	.	0/1:-475.538,0,-434.209:356:170:185:6701:6291:170,185	0/1:-84.0433,0,-362.05:172:129:43:1559:4794:129,43	.	.	.	.	0/1:-551.46,0,-599.98:472:239:231:7970:8587	.	.	0/1:-607.584,0,-608.962:481:237:242:8639:8715	.	1/1:-671.475,-66.2266,0:220:0:220:7711:0	.	0/1:-335.522,0,-358.77:268:135:132:4774:5094	.	.	0/1:-352.521,0,-480.008:324:180:144:5184:6685
+chr11	6630524	.	C	T	2418.58	.	AB=0.515152;ABP=3.40511;AC=1;AF=0.5;AN=2;AO=102;CIGAR=1X;DP=198;DPB=198;DPRA=0;EPP=3.7767;EPPR=3.37221;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=41.8125;NS=1;NUMALT=1;ODDS=508.933;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3808;QR=3526;RO=96;RPL=5;RPP=183.2;RPPR=155.104;RPR=97;RUN=1;SAF=47;SAP=4.37279;SAR=55;SF=34;SRF=51;SRP=3.8246;SRR=45;TYPE=snp	GT:GL:DP:RO:AO:QA:QR	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-270.347,0,-245.433:198:96:102:3808:3526	.	.
+chr11	6630833	.	G	A	9356.74	.	AB=0.460526;ABP=11.239;AC=21;AF=0.5;AN=30;AO=280;CIGAR=1X;DP=7100;DPB=608;DPRA=0;EPP=38.8706;EPPR=38.398;GTI=0;LEN=1;MEANALT=2;MQM=41.7857;MQMR=41.8869;NS=1;NUMALT=1;ODDS=1629.54;PAIRED=0.996429;PAIREDR=0.993884;PAO=0;PQA=0;PQR=0;PRO=0;QA=10453;QR=12055;RO=327;RPL=139;RPP=3.04132;RPPR=3.81381;RPR=141;RUN=1;SAF=151;SAP=6.76385;SAR=129;SF=4,5,6,7,9,13,15,16,19,21,22,23,27,32,34;SRF=169;SRP=3.81381;SRR=158;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	0/1:-719.934,0,-862.552:608:327:280:10453:12055	0/1:-768.131,0,-788.95:593:300:292:10975:11181:300,292	1/1:-1236.74,-100.241,0:393:6:387:14542:204:6,387	0/1:-714.525,0,-832.723:606:321:284:10417:11719	.	0/1:-521.013,0,-608.753:433:229:203:7524:8531:229,203	.	.	.	0/1:-681.39,0,-754.827:569:297:272:9858:10654	.	1/1:-1548.15,-144.494,0:480:0:480:17931:0	1/1:-1649.87,-154.428,0:514:0:513:19144:0:0,513	.	.	1/1:-1514.1,-142.086,0:473:0:472:17525:0	.	0/1:-122.973,0,-548.391:266:202:64:2334:7249:202,64	0/1:-282.731,0,-336.363:247:133:114:4115:4717	1/1:-1552.38,-138.895,0:483:2:480:18049:69	.	.	.	1/1:-1797.4,-169.486,0:568:1:567:20896:15:1,567	.	.	.	.	0/1:-539.518,0,-592.155:436:228:208:7785:8336	.	0/1:-570.941,0,-554.713:431:213:218:8101:7885	.	.
+chr11	6631016	.	C	T	5360.16	.	AB=0.530516;ABP=4.73321;AC=12;AF=0.5;AN=22;AO=113;CIGAR=1X;DP=4671;DPB=213;DPRA=0;EPP=32.2387;EPPR=22.5536;GTI=0;LEN=1;MEANALT=1;MQM=41.823;MQMR=42;NS=1;NUMALT=1;ODDS=566.5;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=4235;QR=3711;RO=100;RPL=60;RPP=3.95191;RPPR=13.5202;RPR=53;RUN=1;SAF=54;SAP=3.49071;SAR=59;SF=1,3,10,18,20,21,26,29,31,33,36;SRF=36;SRP=20.0346;SRR=64;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	0/1:-301.937,0,-257.481:213:100:113:4235:3711	.	0/1:-489.625,0,-553.096:410:216:191:7090:7845:216,191	.	.	.	.	.	.	0/1:-530.876,0,-576.462:430:224:206:7634:8189:224,206	.	.	.	.	.	.	.	0/1:-355.372,0,-493.018:331:190:141:5260:6857	.	0/1:-850.609,0,-836.658:656:330:325:12206:11937:330,325	0/1:-95.6641,0,-422.079:212:161:51:1832:5587:161,51	.	.	.	.	0/1:-739.263,0,-766.636:606:307:298:10663:10969	.	.	0/1:-760.371,0,-822.11:636:331:304:11017:11708	.	1/1:-972.41,-87.7319,0:316:3:312:11322:104	.	0/1:-488.042,0,-565.602:411:220:191:7107:7956	.	.	0/1:-508.907,0,-634.619:450:245:202:7483:8875
+chr11	6631300	.	G	A	3745.63	.	AB=0.477987;ABP=4.34869;AC=1;AF=0.5;AN=2;AO=152;CIGAR=1X;DP=318;DPB=318;DPRA=0;EPP=6.66752;EPPR=10.545;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=42;NS=1;NUMALT=1;ODDS=862.462;PAIRED=0.986842;PAIREDR=0.987952;PAO=0;PQA=0;PQR=0;PRO=0;QA=5585;QR=6167;RO=166;RPL=109;RPP=65.2401;RPPR=26.0855;RPR=43;RUN=1;SAF=71;SAP=4.4389;SAR=81;SF=34;SRF=83;SRP=3.0103;SRR=83;TYPE=snp	GT:GL:DP:RO:AO:QA:QR	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-388.511,0,-439.113:318:166:152:5585:6167	.	.
+chr11	19207841	.	C	T	5212.55	.	AB=0;ABP=0;AC=8;AF=1;AN=12;AO=135;CIGAR=1X;DP=1866;DPB=135;DPRA=0;EPP=4.31318;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=41.9852;MQMR=0;NS=1;NUMALT=1;ODDS=191.755;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=5145;QR=0;RO=0;RPL=43;RPP=41.6303;RPPR=0;RPR=92;RUN=1;SAF=73;SAP=4.95658;SAR=62;SF=1,2,11,23,26,35;SRF=0;SRP=0;SRR=0;TYPE=snp	GT:GL:DP:RO:AO:QA:QR	.	1/1:-444.032,-40.6391,0:135:0:135:5145:0	1/1:-1003.02,-93.3193,0:312:0:310:11612:0	.	.	.	.	.	.	.	.	0/1:-524.233,0,-625.043:446:237:209:7616:8759	.	.	.	.	.	.	.	.	.	.	.	0/1:-459.086,0,-525.913:376:197:178:6634:7394	.	.	0/1:-514.597,0,-472.646:392:188:203:7332:6825	.	.	.	.	.	.	.	.	0/1:-261.985,0,-279.374:205:105:100:3745:3939	.
+chr11	19209713	.	G	A	4129.35	.	AB=0.534653;ABP=6.17076;AC=1;AF=0.5;AN=2;AO=162;CIGAR=1X;DP=303;DPB=303;DPRA=0;EPP=3.0103;EPPR=3.39531;GTI=0;LEN=1;MEANALT=1;MQM=41.4321;MQMR=41.8723;NS=1;NUMALT=1;ODDS=796.139;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=5970;QR=5129;RO=141;RPL=70;RPP=9.49791;RPPR=8.56989;RPR=92;RUN=1;SAF=75;SAP=4.9405;SAR=87;SF=5;SRF=73;SRP=3.39531;SRR=68;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	0/1:-421.039,0,-353.563:303:141:162:5970:5129:141,162	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr11	47353498	.	G	A	4325.77	.	AB=0.54039;ABP=8.09723;AC=9;AF=0.5;AN=18;AO=194;CIGAR=1X;DP=3045;DPB=359;DPRA=0;EPP=22.755;EPPR=32.0817;GTI=0;LEN=1;MEANALT=1;MQM=41.9897;MQMR=41.8909;NS=1;NUMALT=1;ODDS=947.877;PAIRED=1;PAIREDR=0.993939;PAO=0;PQA=0;PQR=0;PRO=0;QA=7337;QR=6200;RO=165;RPL=145;RPP=106.166;RPPR=69.3521;RPR=49;RUN=1;SAF=97;SAP=3.0103;SAR=97;SF=0,4,5,24,26,31,33,34,35;SRF=85;SRP=3.33931;SRR=80;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	0/1:-525.649,0,-428.938:359:165:194:7337:6200:165,194	.	.	.	0/1:-711.895,0,-578.912:503:229:272:9975:8422	0/1:-619.67,0,-492.986:431:197:234:8704:7264:197,234	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-202.075,0,-242.404:171:94:77:2931:3376:94,77	.	0/1:-595.959,0,-631.316:495:254:241:8642:8975	.	.	.	.	0/1:-386.246,0,-288.094:268:118:148:5395:4237	.	0/1:-333.553,0,-431.184:297:165:132:4885:5999	0/1:-373.903,0,-479.331:326:179:147:5467:6653	0/1:-308.392,0,-201.275:195:81:114:4243:2994	.
+chr11	47353695	.	C	T	10699.30	.	AB=0.489842;ABP=3.80438;AC=1;AF=0.5;AN=2;AO=434;CIGAR=1X;DP=886;DPB=886;DPRA=0;EPP=3.99096;EPPR=3.40204;GTI=0;LEN=1;MEANALT=3;MQM=41.6014;MQMR=41.882;NS=1;NUMALT=1;ODDS=2463.6;PAIRED=1;PAIREDR=0.993318;PAO=0;PQA=0;PQR=0;PRO=0;QA=15666;QR=15988;RO=449;RPL=176;RPP=36.6531;RPPR=23.4434;RPR=258;RUN=1;SAF=248;SAP=22.2433;SAR=186;SF=29;SRF=271;SRP=44.839;SRR=178;TYPE=snp	GT:GL:DP:RO:AO:QA:QR	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-1083.2,0,-1125.23:886:449:434:15666:15988	.	.	.	.	.	.	.
+chr11	47354787	.	C	T	5513.65	.	AB=0.58642;ABP=24.028;AC=17;AF=0.5;AN=32;AO=190;CIGAR=1X;DP=5634;DPB=324;DPRA=0;EPP=6.71323;EPPR=8.26073;GTI=0;LEN=1;MEANALT=1;MQM=41.9789;MQMR=42;NS=1;NUMALT=1;ODDS=731.634;PAIRED=0.989474;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=6947;QR=4942;RO=134;RPL=64;RPP=46.9426;RPPR=28.9383;RPR=126;RUN=1;SAF=118;SAP=27.1936;SAR=72;SF=0,1,4,5,10,11,12,23,24,26,30,31,33,34,35,36;SRF=85;SRP=24.012;SRR=49;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	0/1:-505.565,0,-331.937:324:134:190:6947:4942:134,190	0/1:-207.873,0,-137.688:136:57:79:2905:2062	.	.	0/1:-767.185,0,-596.852:531:238:292:10676:8750	1/1:-1777.58,-168.826,0:567:1:564:20531:14:1,564	.	.	.	.	0/1:-557.223,0,-411.405:374:164:210:7720:6066:164,210	0/1:-662.171,0,-509.972:471:207:263:9242:7525	0/1:-802.71,0,-605.777:549:242:306:11165:8889:242,306	.	.	.	.	.	.	.	.	.	.	0/1:-591.499,0,-593.327:457:227:229:8404:8430	0/1:-236.608,0,-201.746:171:79:92:3315:2913:79,92	.	0/1:-594.678,0,-494.987:443:200:240:8380:7241	.	.	.	0/1:-453.762,0,-285.416:290:115:175:6227:4300	0/1:-319.924,0,-259.218:226:103:123:4489:3790	.	0/1:-389.764,0,-310.359:282:126:156:5471:4550	0/1:-413.257,0,-289.859:273:117:156:5699:4317	0/1:-262.385,0,-188.466:175:75:100:3627:2779	0/1:-561.06,0,-369.74:365:151:213:7730:5528
+chr11	47354905	.	T	C	3045.84	.	AB=0.461783;ABP=6.99364;AC=12;AF=0.5;AN=24;AO=145;CIGAR=1X;DP=3289;DPB=314;DPRA=0;EPP=13.9276;EPPR=8.67669;GTI=0;LEN=1;MEANALT=1;MQM=41.9862;MQMR=41.8639;NS=1;NUMALT=1;ODDS=784.637;PAIRED=0.986207;PAIREDR=0.988166;PAO=0;PQA=0;PQR=0;PRO=0;QA=5217;QR=6233;RO=169;RPL=111;RPP=91.8011;RPPR=118.972;RPR=34;RUN=1;SAF=76;SAP=3.74411;SAR=69;SF=2,3,7,9,14,15,28,30,31,32,34,35;SRF=92;SRP=5.90131;SRR=77;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	0/1:-358.49,0,-444.123:314:169:145:5217:6233	0/1:-395.196,0,-338.166:281:130:151:5533:4887:130,151	.	.	.	0/1:-575.289,0,-535.065:438:212:225:8151:7730	.	0/1:-350.388,0,-344.268:272:135:137:4979:4920:135,137	.	.	.	.	0/1:-288.626,0,-408.172:270:151:118:4270:5721	0/1:-395.386,0,-503.989:361:196:164:5896:7113	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-257.82,0,-300.991:221:117:104:3748:4236	.	0/1:-204.715,0,-384.169:230:143:86:3156:5230	0/1:-261.411,0,-316.742:229:123:106:3811:4467	0/1:-348.67,0,-385.013:284:147:137:5005:5435	.	0/1:-237.515,0,-368.648:233:136:97:3543:5068	0/1:-183.737,0,-219.263:156:82:74:2709:3072	.
+chr11	47356582	.	GGGGC	AGGGG	12.13	.	AB=0.6;ABP=3.44459;AC=1;AF=0.5;AN=2;AO=3;CIGAR=1X3M1X;DP=5;DPB=5;DPRA=0;EPP=3.73412;EPPR=5.18177;GTI=0;LEN=5;MEANALT=2;MQM=29.6667;MQMR=42;NS=1;NUMALT=1;ODDS=0.997754;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=64;QR=37;RO=1;RPL=1;RPP=3.73412;RPPR=5.18177;RPR=2;RUN=1;SAF=3;SAP=9.52472;SAR=0;SF=24;SRF=0;SRP=5.18177;SRR=1;TYPE=complex	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-4.01846,0,-2.11759:5:1:3:64:37:1,3	.	.	.	.	.	.	.	.	.	.	.	.
+chr11	47357416	.	G	A	156.89	.	AB=0.571429;ABP=3.32051;AC=2;AF=0.5;AN=4;AO=4;CIGAR=1X;DP=27;DPB=7;DPRA=0;EPP=11.6962;EPPR=9.52472;GTI=0;LEN=1;MEANALT=1;MQM=41.5;MQMR=42;NS=1;NUMALT=1;ODDS=3.66464;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=129;QR=88;RO=3;RPL=1;RPP=5.18177;RPPR=3.73412;RPR=3;RUN=1;SAF=3;SAP=5.18177;SAR=1;SF=1,10;SRF=2;SRP=3.73412;SRR=1;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	0/1:-9.32063,0,-5.9097:7:3:4:129:88	.	.	.	.	.	.	.	.	0/1:-33.5192,0,-11.4805:20:6:14:507:197:6,14	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr11	47358997	.	G	A	3246.11	.	AB=0.52439;ABP=3.8577;AC=2;AF=0.5;AN=4;AO=86;CIGAR=1X;DP=529;DPB=164;DPRA=0;EPP=3.41429;EPPR=4.01252;GTI=0;LEN=1;MEANALT=1;MQM=39.5698;MQMR=40.4487;NS=1;NUMALT=1;ODDS=382.168;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=3015;QR=2633;RO=78;RPL=27;RPP=28.866;RPPR=4.01252;RPR=59;RUN=1;SAF=52;SAP=11.1912;SAR=34;SF=1,10;SRF=54;SRP=28.0658;SRR=24;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	0/1:-199.397,0,-175.136:164:78:86:3015:2633	.	.	.	.	.	.	.	.	0/1:-477.316,0,-381.728:365:165:199:6992:5786:165,199	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr11	47360053	.	G	C	1432.90	.	AB=0.52381;ABP=3.21711;AC=2;AF=0.5;AN=4;AO=22;CIGAR=1X;DP=225;DPB=42;DPRA=0;EPP=4.58955;EPPR=6.91895;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=42;NS=1;NUMALT=1;ODDS=99.965;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=813;QR=715;RO=20;RPL=6;RPP=12.8806;RPPR=6.91895;RPR=16;RUN=1;SAF=15;SAP=9.32731;SAR=7;SF=1,10;SRF=14;SRP=9.95901;SRR=6;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	0/1:-58.1679,0,-50.0413:42:20:22:813:715	.	.	.	.	.	.	.	.	0/1:-250.955,0,-207.352:183:83:100:3511:3007:83,100	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr11	47360197	.	C	A	1383.02	.	AB=0.531532;ABP=3.96888;AC=1;AF=0.5;AN=2;AO=59;CIGAR=1X;DP=111;DPB=111;DPRA=0;EPP=3.34154;EPPR=13.7006;GTI=0;LEN=1;MEANALT=1;MQM=41.6949;MQMR=42;NS=1;NUMALT=1;ODDS=275.633;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=2097;QR=1857;RO=52;RPL=45;RPP=38.3795;RPPR=11.1951;RPR=14;RUN=1;SAF=23;SAP=9.23028;SAR=36;SF=1;SRF=19;SRP=11.1951;SRR=33;TYPE=snp	GT:GL:DP:RO:AO:QA:QR	.	0/1:-148.776,0,-128.487:111:52:59:2097:1857	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr11	47361280	.	A	T	429.01	.	AB=0.178571;ABP=279.408;AC=1;AF=0.5;AN=2;AO=55;CIGAR=1X;DP=308;DPB=308;DPRA=0;EPP=11.8936;EPPR=3.872;GTI=0;LEN=1;MEANALT=2;MQM=42;MQMR=41.8214;NS=1;NUMALT=1;ODDS=98.7833;PAIRED=0.0181818;PAIREDR=0.00396825;PAO=0;PQA=0;PQR=0;PRO=0;QA=1985;QR=9414;RO=252;RPL=26;RPP=3.36563;RPPR=3.14817;RPR=29;RUN=1;SAF=30;SAP=3.99733;SAR=25;SF=21;SRF=133;SRP=4.69922;SRR=119;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-79.7915,0,-718.736:308:252:55:1985:9414:252,55	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr11	47362642	.	C	T	3592.10	.	AB=0.488688;ABP=3.25594;AC=3;AF=0.5;AN=6;AO=108;CIGAR=1X;DP=892;DPB=221;DPRA=0;EPP=3.73412;EPPR=4.56684;GTI=0;LEN=1;MEANALT=1;MQM=41.963;MQMR=41.6637;NS=1;NUMALT=1;ODDS=614.729;PAIRED=0.962963;PAIREDR=0.982301;PAO=0;PQA=0;PQR=0;PRO=0;QA=3926;QR=3980;RO=113;RPL=66;RPP=14.5915;RPPR=29.3178;RPR=42;RUN=1;SAF=49;SAP=5.02092;SAR=59;SF=6,17,32;SRF=55;SRP=3.18325;SRR=58;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	0/1:-275.044,0,-279.404:221:113:108:3926:3980:113,108	.	.	.	.	.	.	.	.	.	.	0/1:-488.648,0,-483.876:386:194:190:6967:6890	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-345.301,0,-353.166:285:142:142:4964:5029	.	.	.	.
+chr11	47364259	.	G	C	5941.15	.	AB=0.467308;ABP=7.83765;AC=1;AF=0.5;AN=2;AO=243;CIGAR=1X;DP=520;DPB=520;DPRA=0;EPP=61.6401;EPPR=99.5977;GTI=0;LEN=1;MEANALT=1;MQM=41.9136;MQMR=41.9097;NS=1;NUMALT=1;ODDS=1368;PAIRED=0.983539;PAIREDR=0.99278;PAO=0;PQA=0;PQR=0;PRO=0;QA=8950;QR=10227;RO=277;RPL=162;RPP=61.6401;RPPR=121.61;RPR=81;RUN=1;SAF=153;SAP=38.4777;SAR=90;SF=2;SRF=163;SRP=21.8323;SRR=114;TYPE=snp	GT:GL:DP:RO:AO:QA:QR	.	.	0/1:-617.402,0,-728.236:520:277:243:8950:10227	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr11	47365199	.	G	A	754.75	.	AB=0.385965;ABP=9.44853;AC=22;AF=0.5;AN=38;AO=22;CIGAR=1X;DP=1154;DPB=57;DPRA=0;EPP=3.0103;EPPR=5.30951;GTI=0;LEN=1;MEANALT=2;MQM=42;MQMR=42;NS=1;NUMALT=1;ODDS=87.9368;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=726;QR=1208;RO=34;RPL=19;RPP=28.2783;RPPR=68.4099;RPR=3;RUN=1;SAF=8;SAP=6.56362;SAR=14;SF=0,3,4,6,7,8,9,14,17,18,19,20,21,22,23,26,29,32,36;SRF=13;SRP=7.09778;SRR=21;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	0/1:-47.0444,0,-88.4329:57:34:22:726:1208:34,22	.	.	0/1:-39.5113,0,-81.4225:51:31:20:663:1110:31,20	0/1:-65.4357,0,-111.368:74:44:30:998:1555	.	0/1:-68.1963,0,-39.5918:47:18:29:936:613:18,29	0/1:-107.854,0,-73.5465:78:32:46:1509:1140	1/1:-153.864,-14.9962,0:55:1:53:1770:14	0/1:-83.4655,0,-59.5157:59:25:34:1151:892:25,34	.	.	.	.	0/1:-75.1717,0,-44.1206:50:19:31:1029:676	.	.	0/1:-67.5188,0,-128.433:84:51:33:1054:1758	0/1:-47.4069,0,-60.15:46:25:21:696:845	1/1:-158.574,-15.6536,0:52:0:52:1809:0	1/1:-260.454,-25.5876,0:85:0:85:2980:0:0,85	0/1:-34.6224,0,-31.6002:33:16:17:534:472:16,17	0/1:-15.6044,0,-24.342:20:11:8:241:341	0/1:-71.32,0,-98.1612:71:39:32:1055:1368	.	.	0/1:-92.3329,0,-70.0178:69:31:37:1297:1031	.	.	0/1:-103.919,0,-68.2064:80:33:46:1452:1058	.	.	0/1:-97.953,0,-72.2095:74:33:41:1380:1086	.	.	.	0/1:-72.0417,0,-82.2719:69:35:34:1054:1181
+chr11	47367758	.	C	T	2186.79	.	AB=0.520958;ABP=3.64744;AC=1;AF=0.5;AN=2;AO=87;CIGAR=1X;DP=167;DPB=167;DPRA=0;EPP=3.23494;EPPR=6.91895;GTI=0;LEN=1;MEANALT=1;MQM=41.7586;MQMR=42;NS=1;NUMALT=1;ODDS=458.226;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3247;QR=3050;RO=80;RPL=27;RPP=30.1911;RPPR=65.5487;RPR=60;RUN=1;SAF=55;SAP=16.2139;SAR=32;SF=20;SRF=48;SRP=9.95901;SRR=32;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-229.256,0,-213.11:167:80:87:3247:3050:80,87	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr11	47369443	.	G	A	6348.98	.	AB=0.512456;ABP=3.76761;AC=10;AF=0.5;AN=18;AO=288;CIGAR=1X;DP=3764;DPB=562;DPRA=0;EPP=15.074;EPPR=3.1371;GTI=0;LEN=1;MEANALT=1;MQM=41.8403;MQMR=41.8686;NS=1;NUMALT=1;ODDS=1565.53;PAIRED=0.993056;PAIREDR=0.992701;PAO=0;PQA=0;PQR=0;PRO=0;QA=10561;QR=9851;RO=274;RPL=132;RPP=7.35324;RPPR=4.15151;RPR=156;RUN=1;SAF=140;SAP=3.49285;SAR=148;SF=5,6,11,12,23,24,28,30,36;SRF=144;SRP=4.56362;SRR=130;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	0/1:-744.598,0,-687.685:562:274:288:10561:9851:274,288	0/1:-399.551,0,-422.87:321:166:155:5732:5968:166,155	.	.	.	.	1/1:-1360.57,-131.55,0:437:0:437:15751:0	0/1:-880.949,0,-720.385:626:290:335:12384:10493:290,335	.	.	.	.	.	.	.	.	.	.	0/1:-765.287,0,-655.493:549:258:291:10782:9437	0/1:-209.913,0,-222.637:169:86:82:3009:3139:86,82	.	.	.	0/1:-393.502,0,-321.258:291:135:156:5575:4686	.	0/1:-431.093,0,-457.953:351:180:171:6201:6469	.	.	.	.	.	0/1:-602.592,0,-559.463:458:224:234:8609:8011
+chr11	47370041	.	T	C	4856.56	.	AB=0.494226;ABP=3.13567;AC=10;AF=0.5;AN=18;AO=214;CIGAR=1X;DP=2878;DPB=433;DPRA=0;EPP=3.65971;EPPR=3.25818;GTI=0;LEN=1;MEANALT=1;MQM=41.972;MQMR=41.8356;NS=1;NUMALT=1;ODDS=1258.94;PAIRED=0.985981;PAIREDR=0.995434;PAO=0;PQA=0;PQR=0;PRO=0;QA=7895;QR=8210;RO=219;RPL=115;RPP=5.60795;RPPR=3.49615;RPR=99;RUN=1;SAF=104;SAP=3.37559;SAR=110;SF=5,6,11,12,23,24,28,30,36;SRF=106;SRP=3.49615;SRR=113;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	0/1:-554.33,0,-577.55:433:219:214:7895:8210:219,214	0/1:-345.562,0,-308.497:258:120:135:4893:4456:120,135	.	.	.	.	1/1:-1178.06,-113.789,0:379:0:378:13620:0	0/1:-565.63,0,-511.585:420:197:221:7974:7374:197,221	.	.	.	.	.	.	.	.	.	.	0/1:-479.502,0,-443.027:354:169:184:6770:6363	0/1:-269.232,0,-207.449:185:82:103:3735:3042:82,103	.	.	.	0/1:-272.597,0,-252.205:204:98:106:3853:3633	.	0/1:-407.47,0,-350.967:297:138:159:5738:5090	.	.	.	.	.	0/1:-370.811,0,-537.644:348:199:149:5486:7424
+chr11	47371475	.	T	G	4206.83	.	AB=0.52071;ABP=4.2695;AC=2;AF=0.5;AN=4;AO=176;CIGAR=1X;DP=670;DPB=338;DPRA=0;EPP=12.6832;EPPR=12.0715;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=41.9753;NS=1;NUMALT=1;ODDS=917.036;PAIRED=0.994318;PAIREDR=0.993827;PAO=0;PQA=0;PQR=0;PRO=0;QA=6352;QR=5994;RO=162;RPL=140;RPP=136.457;RPPR=106.812;RPR=36;RUN=1;SAF=76;SAP=10.1169;SAR=100;SF=4,5;SRF=69;SRP=10.7311;SRR=93;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	0/1:-450.464,0,-417.924:338:162:176:6352:5994	0/1:-440.127,0,-400.503:332:156:176:6239:5782:156,176	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr11	47371484	.	AGGGGCGA	AGGGCGA	4998.69	.	AB=0;ABP=0;AC=50;AF=1;AN=66;AO=104;CIGAR=1M1D1M;DP=8497;DPB=80.6667;DPRA=0;EPP=3.34437;EPPR=26.8965;GTI=0;LEN=1;MEANALT=1;MQM=41.9615;MQMR=42;NS=1;NUMALT=1;ODDS=78.1621;PAIRED=0;PAIREDR=0;PAO=0.5;PQA=0;PQR=0;PRO=0.5;QA=3655;QR=374;RO=11;RPL=89;RPP=117.347;RPPR=26.8965;RPR=15;RUN=1;SAF=41;SAP=13.116;SAR=63;SF=1,2,3,4,6,7,8,9,10,12,13,14,15,16,17,18,19,20,21,22,23,25,26,27,28,29,30,31,32,33,34,35,36;SRF=11;SRP=26.8965;SRR=0;TYPE=del	GT:GL:DP:RO:AO:QA:QR:AD	.	1/1:.,.,0:115:11:104:3655:374	0/1:.,.,-13.9217:307:39:267:8849:1210	1/1:-661.545,-71.3441,0:226:0:223:7586:0:0,223	0/1:.,.,-491.794:327:190:137:4903:6794	.	0/1:-195.073,0,-203.937:171:81:88:2806:2922:81,88	1/1:.,.,0:398:33:358:11805:1105	1/1:.,.,0:254:24:227:7620:771	1/1:-619.625,-68.0328,0:216:0:212:7084:0:0,212	1/1:-661.568,-59.1097,0:239:4:232:7730:150:4,232	.	0/1:-392.818,0,-422.428:353:173:171:5761:6112:173,171	0/1:.,.,-0.384213:299:32:266:8840:1034	1/1:.,.,0:191:18:172:5917:620	1/1:.,.,0:297:31:264:8750:1025	0/1:-304.916,0,-303.688:265:123:136:4405:4389:123,136	1/1:.,.,0:312:27:284:9729:931	0/1:.,.,-1.59134:192:20:172:5663:674	1/1:.,.,0:305:29:274:9445:1019	1/1:-830.221,-87.2987,0:292:0:286:9517:0:0,286	1/1:-340.102,-37.0267,0:123:0:119:3885:0:0,119	1/1:.,.,0:104:6:97:3087:200	0/1:.,.,-442.002:323:175:148:5171:6178	.	1/1:-1104.6,-120.111,0:395:0:387:12653:0:0,387	0/1:.,.,-390.508:328:168:156:4831:5571	1/1:-828.508,-90.309,0:294:0:286:9473:0:0,286	0/1:.,.,-247.466:197:104:92:2787:3536	1/1:.,.,0:395:31:359:11659:1014	0/1:.,.,-338.214:253:137:116:3879:4768	0/1:.,.,-19.388:174:24:147:4717:812	1/1:.,.,0:278:23:254:8612:773	0/1:.,.,-327.017:236:131:105:3568:4548	0/1:.,.,-8.40779:210:26:183:6213:808	0/1:.,.,-180.753:132:70:62:2149:2521	0/1:.,.,-390.199:296:157:138:4651:5532
+chr11	47371578	.	G	A	1806.75	.	AB=0.436364;ABP=8.81405;AC=3;AF=0.5;AN=6;AO=72;CIGAR=1X;DP=498;DPB=165;DPRA=0;EPP=15.074;EPPR=17.6035;GTI=0;LEN=1;MEANALT=1;MQM=41.9722;MQMR=41.8065;NS=1;NUMALT=1;ODDS=382.785;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2614;QR=3370;RO=93;RPL=46;RPP=15.074;RPPR=8.26386;RPR=26;RUN=1;SAF=22;SAP=26.6552;SAR=50;SF=19,23,29;SRF=36;SRP=13.3073;SRR=57;TYPE=snp	GT:GL:DP:RO:AO:QA:QR	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-177.915,0,-241.546:165:93:72:2614:3370	.	.	.	0/1:-178.822,0,-172.104:140:68:71:2537:2470	.	.	.	.	.	0/1:-216.575,0,-247.684:193:100:93:3144:3533	.	.	.	.	.	.	.
+chr11	47371598	.	C	T	1001.16	.	AB=0.492857;ABP=3.07234;AC=4;AF=0.5;AN=8;AO=69;CIGAR=1X;DP=390;DPB=140;DPRA=0;EPP=10.0912;EPPR=19.1893;GTI=0;LEN=1;MEANALT=1;MQM=41.5072;MQMR=41.4366;NS=1;NUMALT=1;ODDS=379.466;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2517;QR=2589;RO=71;RPL=30;RPP=5.55942;RPPR=19.1893;RPR=39;RUN=1;SAF=24;SAP=16.8888;SAR=45;SF=13,15,21,22;SRF=28;SRP=9.89173;SRR=43;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-173.38,0,-179.959:140:71:69:2517:2589	.	0/1:-178.438,0,-210.046:153:80:73:2660:2971	.	.	.	.	.	0/1:-22.9761,0,-123.593:56:43:13:454:1623:43,13	0/1:-59.2276,0,-44.9405:41:18:23:821:659	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr11	47371697	.	T	C	1338.38	.	AB=0.523364;ABP=3.51765;AC=1;AF=0.5;AN=2;AO=56;CIGAR=1X;DP=107;DPB=107;DPRA=0;EPP=6.88793;EPPR=4.07475;GTI=0;LEN=1;MEANALT=1;MQM=41.9643;MQMR=40.6667;NS=1;NUMALT=1;ODDS=276.043;PAIRED=0.982143;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2036;QR=1909;RO=51;RPL=42;RPP=33.4109;RPPR=21.7871;RPR=14;RUN=1;SAF=19;SAP=15.5738;SAR=37;SF=4;SRF=19;SRP=10.206;SRR=32;TYPE=snp	GT:GL:DP:RO:AO:QA:QR	.	.	.	.	0/1:-144.682,0,-128.623:107:51:56:2036:1909	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr11	47372096	.	C	A	47.97	.	AB=0.666667;ABP=3.73412;AC=1;AF=0.5;AN=2;AO=2;CIGAR=1X;DP=3;DPB=3;DPRA=0;EPP=7.35324;EPPR=5.18177;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=42;NS=1;NUMALT=1;ODDS=6.52278;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=70;QR=14;RO=1;RPL=1;RPP=3.0103;RPPR=5.18177;RPR=1;RUN=1;SAF=1;SAP=3.0103;SAR=1;SF=7;SRF=0;SRP=5.18177;SRR=1;TYPE=snp	GT:GL:DP:RO:AO:QA:QR	.	.	.	.	.	.	.	0/1:-5.5938,0,-0.49625:3:1:2:70:14	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr11	74168411	.	A	G	6399.44	.	AB=0.445255;ABP=20.8417;AC=11;AF=0.5;AN=22;AO=305;CIGAR=1X;DP=7117;DPB=685;DPRA=0;EPP=3.35916;EPPR=44.4058;GTI=0;LEN=1;MEANALT=2;MQM=40.3377;MQMR=41.1794;NS=1;NUMALT=1;ODDS=1431.78;PAIRED=0.960656;PAIREDR=0.957784;PAO=0;PQA=0;PQR=0;PRO=0;QA=9942;QR=13558;RO=379;RPL=118;RPP=36.9066;RPPR=89.6916;RPR=187;RUN=1;SAF=193;SAP=49.7219;SAR=112;SF=2,9,10,12,13,15,17,27,30,34,35;SRF=217;SRP=20.342;SRR=162;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	0/1:-639.246,0,-958.264:685:379:305:9942:13558	.	.	.	.	.	.	0/1:-589.239,0,-631.085:530:257:273:8726:9290:257,273	0/1:-575.902,0,-774.732:582:312:267:8953:11210:312,267	.	0/1:-986.62,0,-1216.52:934:481:449:14907:17488:481,449	0/1:-676.153,0,-922.255:703:371:329:10474:13415	.	0/1:-723.897,0,-1011.64:742:402:339:11112:14542	.	0/1:-774.415,0,-957.728:725:374:350:11607:13699	.	.	.	.	.	.	.	.	.	0/1:-777.734,0,-956.401:736:383:350:11598:13831:383,350	.	.	0/1:-535.464,0,-770.643:557:304:253:8237:10928	.	.	.	0/1:-565.741,0,-800.527:592:315:275:8823:11381	0/1:-370.23,0,-416.674:331:167:164:5429:6029	.
+chr11	111781047	.	A	C	7358.03	.	AB=0.485714;ABP=3.38255;AC=22;AF=0.5;AN=40;AO=102;CIGAR=1X;DP=9884;DPB=210;DPRA=0;EPP=5.13919;EPPR=3.09072;GTI=0;LEN=1;MEANALT=1;MQM=41.6078;MQMR=42;NS=1;NUMALT=1;ODDS=591.461;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=3815;QR=3890;RO=108;RPL=53;RPP=3.35092;RPPR=8.15749;RPR=49;RUN=1;SAF=67;SAP=24.8102;SAR=35;SF=1,5,6,8,11,15,16,17,18,20,21,22,23,25,26,29,30,33,34,35;SRF=65;SRP=12.7417;SRR=43;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	0/1:-265.915,0,-274.179:210:108:102:3815:3890	.	.	.	0/1:-787.62,0,-960.395:666:361:305:11430:13424:361,305	0/1:-542.082,0,-598.775:442:231:211:7829:8469:231,211	.	0/1:-600.626,0,-592.68:464:227:236:8553:8474	.	.	1/1:-1929.33,-160.268,0:630:10:619:22650:333	.	.	.	0/1:-689.202,0,-789.616:575:305:270:10008:11161	0/1:-771.096,0,-727.378:571:279:292:10955:10427:279,292	0/1:-769.12,0,-750.426:582:288:294:10946:10713	0/1:-392.244,0,-518.404:351:196:155:5754:7212	.	0/1:-861.447,0,-838.152:658:329:329:12250:11987:329,329	0/1:-274.584,0,-357.39:247:138:109:4034:4967:138,109	0/1:-324.533,0,-357.87:267:140:127:4708:5056	0/1:-707.234,0,-704.313:539:270:269:10065:10033	.	0/1:-875.122,0,-1058.37:757:406:349:12759:14856:406,349	0/1:-638.812,0,-679.505:531:270:260:9249:9695	.	.	1/1:-2228.95,-208.08,0:720:3:715:25957:93	0/1:-621.604,0,-570.083:456:220:236:8767:8172	.	.	0/1:-506.614,0,-552.652:410:212:198:7280:7801	0/1:-685.425,0,-641.222:507:247:259:9694:9190	0/1:-406.726,0,-375.687:301:146:154:5744:5379	.
+chr11	111782284	.	C	T	3369.02	.	AB=0.520661;ABP=4.35625;AC=2;AF=0.5;AN=4;AO=189;CIGAR=1X;DP=589;DPB=363;DPRA=0;EPP=3.02179;EPPR=6.63779;GTI=0;LEN=1;MEANALT=2;MQM=41.2328;MQMR=41.5376;NS=1;NUMALT=1;ODDS=948.391;PAIRED=0.978836;PAIREDR=0.99422;PAO=0;PQA=0;PQR=0;PRO=0;QA=6420;QR=6121;RO=173;RPL=74;RPP=22.3238;RPPR=3.02285;RPR=115;RUN=1;SAF=108;SAP=11.386;SAR=81;SF=29,33;SRF=96;SRP=7.54152;SRR=77;TYPE=snp	GT:GL:DP:RO:AO:QA:QR	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-444.09,0,-419.879:363:173:189:6420:6121	.	.	.	0/1:-248.693,0,-304.113:226:121:105:3630:4280	.	.	.
+chr11	118015832	.	G	A	7026.68	.	AB=0.503676;ABP=3.07417;AC=2;AF=0.5;AN=4;AO=274;CIGAR=1X;DP=1101;DPB=544;DPRA=0;EPP=37.532;EPPR=50.8715;GTI=0;LEN=1;MEANALT=2;MQM=41.7774;MQMR=41.8662;NS=1;NUMALT=1;ODDS=1610.33;PAIRED=0.992701;PAIREDR=0.996283;PAO=0;PQA=0;PQR=0;PRO=0;QA=10117;QR=10192;RO=269;RPL=137;RPP=3.0103;RPPR=3.40585;RPR=137;RUN=1;SAF=133;SAP=3.51751;SAR=141;SF=5,20;SRF=136;SRP=3.08295;SRR=133;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	0/1:-710.309,0,-714.919:544:269:274:10117:10192:269,274	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-721.016,0,-755.367:557:281:276:10344:10699:281,276	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr11	118037813	.	G	T	5234.61	.	AB=0;ABP=0;AC=35;AF=1;AN=58;AO=296;CIGAR=1X;DP=9729;DPB=298;DPRA=0;EPP=11.4908;EPPR=7.35324;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=42;NS=1;NUMALT=1;ODDS=404.187;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=10815;QR=32;RO=2;RPL=216;RPP=138.698;RPPR=7.35324;RPR=80;RUN=1;SAF=81;SAP=134.737;SAR=215;SF=0,1,3,4,5,6,7,8,9,11,12,13,14,15,16,17,18,19,21,22,23,25,27,28,29,30,32,34,36;SRF=0;SRP=7.35324;SRR=2;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	1/1:-933.932,-86.669,0:298:2:296:10815:32:2,296	0/1:-144.116,0,-202.358:133:75:58:2125:2802	.	0/1:-366.308,0,-533.944:353:202:150:5472:7434:202,150	0/1:-514.18,0,-504.507:398:196:200:7338:7213	0/1:-602.997,0,-584.555:456:224:231:8572:8363:224,231	0/1:-333.188,0,-350.646:268:135:133:4785:5022:135,133	1/1:-1303.5,-122.819,0:419:1:417:15141:33	0/1:-343.188,0,-440.118:301:164:136:5012:6158	0/1:-301.734,0,-399.38:274:151:123:4434:5578:151,123	.	0/1:-509.587,0,-604.963:455:241:214:7538:8569	0/1:-716.737,0,-594.469:500:230:270:10039:8635:230,270	1/1:-1112.19,-101.793,0:367:3:362:13010:92	0/1:-357.493,0,-337.549:266:132:134:5061:4821	0/1:-549.942,0,-453.628:396:183:213:7788:6701	0/1:-419.832,0,-515.327:355:190:165:6090:7206:190,165	0/1:-536.555,0,-463.34:383:180:203:7564:6694	0/1:-205.016,0,-295.392:197:111:86:3046:4094	1/1:-1142.19,-107.769,0:359:0:358:13261:0	.	0/1:-311.119,0,-47.2651:149:33:116:4108:1078:33,116	0/1:-178.867,0,-171.047:148:72:76:2586:2487	0/1:-540.442,0,-572.523:424:217:207:7746:8115	.	0/1:-608.611,0,-635.986:501:255:244:8775:9104:255,244	.	0/1:-466.148,0,-481.117:388:195:191:6714:6912:195,191	1/1:-780.241,-74.3623,0:253:1:252:9057:18	0/1:-538.287,0,-691.405:507:277:227:7998:9787	0/1:-396.013,0,-366.597:294:142:151:5597:5274	.	0/1:-363.064,0,-437.819:309:166:142:5265:6141	.	1/1:-709.021,-64.9287,0:221:1:220:8234:16	.	0/1:-549.886,0,-365.542:357:149:206:7659:5473
+chr11	118047045	.	C	T	1450.35	.	AB=0.439716;ABP=7.46105;AC=1;AF=0.5;AN=2;AO=62;CIGAR=1X;DP=141;DPB=141;DPRA=0;EPP=4.27115;EPPR=6.42261;GTI=0;LEN=1;MEANALT=2;MQM=41.6613;MQMR=41.7662;NS=1;NUMALT=1;ODDS=333.955;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2364;QR=2871;RO=77;RPL=18;RPP=26.6864;RPPR=9.35551;RPR=44;RUN=1;SAF=52;SAP=64.7922;SAR=10;SF=16;SRF=64;SRP=76.3609;SRR=13;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-160.704,0,-206.248:141:77:62:2364:2871:77,62	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr11	123504945	.	G	A	2755.49	.	AB=0.45;ABP=8.65613;AC=1;AF=0.5;AN=2;AO=117;CIGAR=1X;DP=260;DPB=260;DPRA=0;EPP=3.02886;EPPR=13.3477;GTI=0;LEN=1;MEANALT=2;MQM=42;MQMR=42;NS=1;NUMALT=1;ODDS=634.475;PAIRED=1;PAIREDR=0.985915;PAO=0;PQA=0;PQR=0;PRO=0;QA=4316;QR=5258;RO=142;RPL=99;RPP=124.78;RPPR=143.942;RPR=18;RUN=1;SAF=56;SAP=3.47429;SAR=61;SF=11;SRF=73;SRP=3.25497;SRR=69;TYPE=snp	GT:GL:DP:RO:AO:QA:QR	.	.	.	.	.	.	.	.	.	.	.	0/1:-296.089,0,-376.711:260:142:117:4316:5258	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr11	123504959	.	C	G	3839.19	.	AB=0;ABP=0;AC=44;AF=1;AN=64;AO=79;CIGAR=1X;DP=6750;DPB=79;DPRA=0;EPP=3.03779;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=41.5063;MQMR=0;NS=1;NUMALT=1;ODDS=114.122;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=2864;QR=0;RO=0;RPL=68;RPP=92.3155;RPPR=0;RPR=11;RUN=1;SAF=29;SAP=15.1321;SAR=50;SF=1,2,3,4,5,6,7,8,9,10,11,13,14,15,16,17,18,19,20,21,22,24,25,26,27,28,29,30,33,34,35,36;SRF=0;SRP=0;SRR=0;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	1/1:-246.97,-23.7814,0:79:0:79:2864:0	0/1:-286.07,0,-262.587:218:103:114:4037:3805	1/1:-630.905,-62.0122,0:207:0:206:7268:0:0,206	1/1:-913.508,-87.5997,0:291:0:291:10507:0	0/1:-410.027,0,-360.734:300:141:159:5746:5198:141,159	1/1:-571.135,-55.0945,0:188:1:187:6565:15:1,187	1/1:-1048.61,-102.35,0:340:0:340:12072:0	1/1:-597.946,-55.3857,0:189:1:187:6891:14	0/1:-267.533,0,-281.395:215:110:105:3818:4006:110,105	1/1:-757.727,-73.4513,0:244:0:244:8706:0:0,244	0/1:-306.183,0,-348.741:260:135:124:4411:4911	.	0/1:-324.363,0,-272.854:240:111:129:4565:3967	0/1:-224.37,0,-195.175:168:78:89:3149:2826	0/1:-424.418,0,-251.162:270:106:164:5835:3825	0/1:-315.623,0,-274.267:231:110:121:4426:3957:110,121	0/1:-315.911,0,-392.487:273:146:127:4576:5473	0/1:-174.978,0,-126.786:120:52:68:2419:1868	0/1:-267.573,0,-218.466:187:86:101:3724:3164	1/1:-824.83,-80.074,0:266:0:266:9490:0:0,266	0/1:-124.261,0,-110.879:92:44:48:1757:1590:44,48	0/1:-94.1452,0,-121.377:84:46:38:1367:1684	.	1/1:-255.615,-24.0824,0:80:0:80:2933:0:0,80	0/1:-307.465,0,-465.979:308:177:129:4592:6430:177,129	1/1:-790.29,-77.4705,0:262:1:261:9119:14	0/1:-287.719,0,-400.392:275:151:124:4307:5563:151,124	0/1:-223.705,0,-171.713:154:69:85:3101:2509	0/1:-345.668,0,-382.54:298:153:145:4997:5461	1/1:-643.784,-61.0056,0:208:1:206:7425:15	.	.	0/1:-167.019,0,-237.77:162:90:70:2481:3295	0/1:-267.919,0,-290.317:223:115:108:3847:4159	0/1:-166.418,0,-83.6687:99:37:62:2252:1301	1/1:-685.292,-65.3235,0:219:0:217:7872:0
+chr11	123513161	.	G	A	4758.15	.	AB=0.479532;ABP=3.63253;AC=10;AF=0.5;AN=18;AO=82;CIGAR=1X;DP=2931;DPB=171;DPRA=0;EPP=3.11623;EPPR=3.23494;GTI=0;LEN=1;MEANALT=3;MQM=42;MQMR=42;NS=1;NUMALT=1;ODDS=459.183;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=3104;QR=3221;RO=87;RPL=11;RPP=98.3432;RPPR=128.831;RPR=71;RUN=1;SAF=51;SAP=13.6028;SAR=31;SF=1,4,6,12,14,15,18,21,28;SRF=53;SRP=12.0207;SRR=34;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	0/1:-217.383,0,-228.39:171:87:82:3104:3221	.	.	0/1:-595.628,0,-766.192:520:287:233:8753:10644	.	0/1:-388.024,0,-317.349:270:123:147:5419:4597:123,147	.	.	.	.	.	0/1:-767.762,0,-604.443:532:242:288:10733:8869:242,288	.	0/1:-450.952,0,-409.812:330:159:171:6364:5895	1/1:-1496.8,-141.484,0:471:0:470:17388:0	.	.	0/1:-276.113,0,-303.814:227:117:110:3976:4288	.	.	0/1:-89.7351,0,-295.423:151:107:43:1558:3919:107,43	.	.	.	.	.	.	0/1:-326.801,0,-316.063:259:126:131:4674:4530	.	.	.	.	.	.	.	.
+chr11	123524411	.	G	A	1860.21	.	AB=0.547297;ABP=5.88603;AC=3;AF=0.5;AN=6;AO=81;CIGAR=1X;DP=444;DPB=148;DPRA=0;EPP=3.25157;EPPR=17.3031;GTI=0;LEN=1;MEANALT=1;MQM=41.7284;MQMR=42;NS=1;NUMALT=1;ODDS=378.427;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3001;QR=2530;RO=67;RPL=21;RPP=43.7857;RPPR=20.1552;RPR=60;RUN=1;SAF=46;SAP=6.2541;SAR=35;SF=2,9,36;SRF=39;SRP=6.93191;SRR=28;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	0/1:-215.162,0,-174.399:148:67:81:3001:2530	.	.	.	.	.	.	0/1:-168.035,0,-211.165:144:78:65:2441:2944:78,65	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-208.13,0,-182.231:152:71:81:2948:2634
+chr11	128781339	.	T	C	9230.77	.	AB=0;ABP=0;AC=71;AF=1;AN=74;AO=307;CIGAR=1X;DP=11541;DPB=309;DPRA=0;EPP=14.9003;EPPR=0;GTI=0;LEN=1;MEANALT=2;MQM=41.9414;MQMR=0;NS=1;NUMALT=1;ODDS=430.198;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=11191;QR=0;RO=0;RPL=123;RPP=29.3297;RPPR=0;RPR=184;RUN=1;SAF=159;SAP=3.86616;SAR=148;SF=0,1,2,3,4,5,6,7,8,9,10,11,12,13,14,15,16,17,18,19,20,21,22,23,24,25,26,27,28,29,30,31,32,33,34,35,36;SRF=0;SRP=0;SRR=0;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	1/1:-970.267,-92.4162,0:309:0:307:11191:0:0,307	0/1:-145.815,0,-158.623:116:60:56:2083:2240	1/1:-1040.44,-100.544,0:337:0:334:12027:0	1/1:-1061.56,-99.7694,0:337:1:335:12302:16:1,335	1/1:-1090.69,-97.9048,0:354:3:349:12734:92	1/1:-1177.37,-112.585,0:374:0:374:13593:0:0,374	1/1:-844.263,-79.773,0:265:0:265:9736:0:0,265	1/1:-1383.81,-133.356,0:444:0:443:16032:0	1/1:-807.857,-76.1796,0:261:1:260:9342:24	1/1:-827.237,-78.5688,0:262:0:261:9595:0:0,261	1/1:-935.335,-89.1049,0:296:0:296:10850:0:0,296	1/1:-1295.16,-125.228,0:416:0:416:14941:0	1/1:-1399.67,-134.56,0:449:0:447:16154:0:0,447	1/1:-1005.5,-97.5337,0:324:0:324:11602:0	1/1:-846.582,-79.773,0:265:0:265:9764:0	1/1:-1142.41,-110.177,0:366:0:366:13211:0	1/1:-1052.33,-99.6409,0:333:0:331:12166:0:0,331	1/1:-1221.49,-114.9,0:387:1:386:14117:16	1/1:-617.234,-58.0988,0:193:0:193:7114:0	1/1:-1165.47,-110.779,0:368:0:368:13451:0	0/1:-439.996,0,-435.963:341:169:169:6245:6237:169,169	1/1:-474.519,-46.3586,0:154:0:154:5481:0:0,154	1/1:-503.997,-49.0679,0:163:0:163:5792:0	1/1:-1230.74,-115.596,0:386:0:384:14210:0	1/1:-593.277,-55.6906,0:185:0:185:6848:0:0,185	1/1:-1444.06,-139.377,0:463:0:463:16654:0:0,463	1/1:-1232.9,-118.097,0:410:2:405:14302:50	1/1:-1440,-131.924,0:462:2:459:16713:78:2,459	1/1:-797.443,-74.9507,0:260:1:256:9218:27	0/1:-563.484,0,-537.764:443:216:226:8050:7768	1/1:-910.285,-86.3956,0:287:0:287:10499:0	1/1:-775.017,-74.9565,0:249:0:249:8948:0	1/1:-981.822,-94.2224,0:314:0:313:11343:0	1/1:-840.794,-80.375,0:268:0:267:9691:0	1/1:-777.616,-73.7524,0:246:0:245:8983:0	1/1:-480.667,-45.1545,0:152:0:150:5546:0	1/1:-955.225,-90.9111,0:302:0:302:11041:0
+chr11	128781978	.	T	G	10029.54	.	AB=0;ABP=0;AC=71;AF=1;AN=74;AO=326;CIGAR=1X;DP=12735;DPB=327;DPRA=0;EPP=45.6404;EPPR=5.18177;GTI=0;LEN=1;MEANALT=1;MQM=41.6534;MQMR=23;NS=1;NUMALT=1;ODDS=450.902;PAIRED=0.993865;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=12023;QR=15;RO=1;RPL=138;RPP=19.6627;RPPR=5.18177;RPR=188;RUN=1;SAF=175;SAP=6.84701;SAR=151;SF=0,1,2,3,4,5,6,7,8,9,10,11,12,13,14,15,16,17,18,19,20,21,22,23,24,25,26,27,28,29,30,31,32,33,34,35,36;SRF=0;SRP=5.18177;SRR=1;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	1/1:-1036.64,-96.9988,0:327:1:326:12023:15:1,326	0/1:-162.466,0,-204.478:142:76:66:2494:2872	1/1:-1063.86,-102.35,0:341:0:340:12574:0	1/1:-1084.37,-104.758,0:348:0:348:12789:0:0,348	1/1:-1384.76,-131.41,0:442:1:440:16178:15	1/1:-1375.27,-131.758,0:443:1:442:16172:16:1,442	1/1:-823.694,-77.9732,0:264:1:263:9647:15:1,263	1/1:-1438.37,-139.716,0:478:3:475:17362:46	1/1:-900.836,-85.8607,0:290:1:289:10694:15	1/1:-929.369,-90.309,0:300:0:300:10963:0:0,300	1/1:-1115.44,-105.662,0:353:0:351:13109:0:0,351	1/1:-1451.49,-140.798,0:474:2:471:17032:48	1/1:-1473.79,-139.984,0:480:2:478:17667:48:2,478	1/1:-1255.9,-120.518,0:405:1:404:14748:14	1/1:-960.688,-91.8206,0:310:1:309:11324:15	1/1:-1031.27,-100.913,0:345:2:343:12478:31	1/1:-993.536,-93.5745,0:320:2:318:11715:30:2,318	1/1:-1228.26,-117.107,0:394:1:393:14492:15	1/1:-654.997,-65.3235,0:217:0:217:7796:0	1/1:-1058.24,-100.845,0:335:0:335:12354:0	0/1:-493.923,0,-415.145:356:169:187:7014:6174:169,187	1/1:-698.302,-66.8287,0:222:0:222:8109:0:0,222	1/1:-663.452,-64.4204,0:215:0:214:7761:0	1/1:-1228.29,-117.101,0:390:0:389:14394:0	1/1:-561.301,-54.7875,0:182:0:182:6677:0:0,182	1/1:-1852.33,-178.193,0:604:2:602:21733:46:2,602	1/1:-1414.14,-139.979,0:466:0:465:16633:0	1/1:-1476.65,-141.747,0:484:1:481:17531:39:1,481	1/1:-783.752,-76.7627,0:255:0:255:9365:0	0/1:-694.107,0,-694.696:554:272:280:10182:10051	1/1:-830.796,-80.375,0:268:0:267:9750:0	1/1:-879.934,-84.2884,0:280:0:280:10280:0	1/1:-1036.44,-99.942,0:332:0:332:12161:0	1/1:-933.362,-86.3618,0:299:1:298:10946:39	1/1:-920.929,-86.1263,0:298:1:297:10990:37	1/1:-548.281,-51.4761,0:171:0:171:6407:0	1/1:-1070.29,-102.872,0:351:2:349:12767:30
+chr11	128782002	.	T	C	11581.50	.	AB=0;ABP=0;AC=71;AF=1;AN=74;AO=388;CIGAR=1X;DP=14432;DPB=391;DPRA=0;EPP=46.3502;EPPR=5.18177;GTI=0;LEN=1;MEANALT=2;MQM=41.6753;MQMR=23;NS=1;NUMALT=1;ODDS=535.369;PAIRED=0.994845;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=14653;QR=37;RO=1;RPL=152;RPP=42.4998;RPPR=5.18177;RPR=236;RUN=1;SAF=182;SAP=6.23393;SAR=206;SF=0,1,2,3,4,5,6,7,8,9,10,11,12,13,14,15,16,17,18,19,20,21,22,23,24,25,26,27,28,29,30,31,32,33,34,35,36;SRF=1;SRP=5.18177;SRR=0;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	1/1:-1257.94,-115.094,0:391:1:388:14653:37:1,388	0/1:-183.652,0,-233.858:159:86:73:2798:3275	1/1:-1204.52,-114.993,0:382:0:382:14243:0	1/1:-1202.98,-113.488,0:378:0:377:14279:0:0,377	1/1:-1588.2,-149.311,0:496:0:496:18645:0	1/1:-1503.56,-142.67,0:480:1:478:17770:17:1,478	1/1:-936.703,-87.9008,0:292:0:292:10964:0:0,292	1/1:-1619.65,-157.138,0:522:0:522:19335:0	1/1:-1018.94,-94.8788,0:325:1:323:12111:29	1/1:-1094.04,-103.554,0:344:0:344:12888:0:0,344	1/1:-1319.57,-124.325,0:413:0:413:15514:0:0,413	1/1:-1704.41,-162.556,0:541:0:540:19981:0	1/1:-1662.62,-160.449,0:533:0:533:19950:0:0,533	1/1:-1510.08,-142.688,0:474:0:474:17715:0	1/1:-1049,-99.3399,0:331:0:330:12371:0	1/1:-1189,-115.897,0:385:0:385:14309:0	1/1:-1239.71,-115.048,0:392:1:390:14645:29:1,390	1/1:-1426.61,-135.464,0:451:0:450:16822:0	1/1:-750.202,-71.9462,0:239:0:239:8929:0	1/1:-1236.17,-116.499,0:387:0:387:14559:0	0/1:-600.88,0,-497.907:424:198:226:8506:7365:198,226	1/1:-763.143,-72.2472,0:241:0:240:8923:0:0,240	1/1:-789.299,-74.9565,0:249:0:249:9201:0	1/1:-1438.95,-135.464,0:451:0:450:16930:0	1/1:-662.636,-62.9153,0:211:0:209:7903:0:0,209	1/1:-2124.53,-202.593,0:673:0:673:25001:0:0,673	1/1:-1665.53,-159.703,0:533:1:532:19543:16	1/1:-1776.5,-170.289,0:571:1:570:21151:16:1,570	1/1:-880.265,-85.4925,0:284:0:284:10483:0	0/1:-748,0,-816.581:619:316:301:11068:11672	1/1:-972.073,-92.4162,0:310:0:307:11462:0	1/1:-1009.83,-94.8245,0:317:0:315:11821:0	1/1:-1180.99,-110.715,0:372:1:371:13931:13	1/1:-1047.48,-96.3036,0:333:1:330:12371:39	1/1:-1074.44,-98.4685,0:339:1:338:12804:37	1/1:-662.407,-62.0122,0:206:0:206:7743:0	1/1:-1196.05,-114.09,0:384:0:379:14272:0
+chr11	128782012	.	C	G	12007.32	.	AB=0;ABP=0;AC=73;AF=1;AN=74;AO=387;CIGAR=1X;DP=14496;DPB=388;DPRA=0;EPP=34.5724;EPPR=0;GTI=0;LEN=1;MEANALT=2;MQM=41.7235;MQMR=0;NS=1;NUMALT=1;ODDS=541.101;PAIRED=0.994832;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=14468;QR=0;RO=0;RPL=169;RPP=16.4824;RPPR=0;RPR=218;RUN=1;SAF=175;SAP=10.6918;SAR=212;SF=0,1,2,3,4,5,6,7,8,9,10,11,12,13,14,15,16,17,18,19,20,21,22,23,24,25,26,27,28,29,30,31,32,33,34,35,36;SRF=0;SRP=0;SRR=0;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	1/1:-1248.31,-116.499,0:388:0:387:14468:0:0,387	1/1:-530.556,-49.67,0:165:0:165:6237:0	1/1:-1187.59,-114.09,0:380:0:379:13995:0	1/1:-1190.18,-112.585,0:374:0:374:14073:0:0,374	1/1:-1548.97,-146.602,0:487:0:487:18141:0	1/1:-1519.03,-145.096,0:482:0:482:17892:0:0,482	1/1:-897.706,-85.1915,0:284:0:283:10504:0:0,283	1/1:-1606.39,-157.138,0:522:0:522:19204:0	1/1:-1042.09,-100.243,0:334:0:333:12342:0	1/1:-1067.94,-101.748,0:338:0:338:12541:0:0,338	1/1:-1294.22,-122.82,0:408:0:408:15218:0:0,408	1/1:-1696.92,-163.459,0:544:0:543:19853:0	1/1:-1664.28,-159.785,0:539:1:537:19895:35:1,537	1/1:-1505.18,-142.086,0:472:0:472:17620:0	1/1:-1059.91,-102.35,0:340:0:340:12456:0	1/1:-1187.71,-116.499,0:388:0:387:14216:0	1/1:-1240.69,-116.104,0:391:1:390:14577:16:1,390	1/1:-1418.29,-135.162,0:449:0:449:16729:0	1/1:-746.116,-71.6451,0:238:0:238:8832:0	1/1:-1264.73,-119.81,0:398:0:398:14851:0	0/1:-608.216,0,-556.217:445:215:230:8639:8107:215,230	1/1:-764.646,-72.5482,0:241:0:241:8900:0:0,241	1/1:-790.264,-75.8596,0:252:0:252:9232:0	1/1:-1435.89,-134.861,0:448:0:448:16861:0	1/1:-685.373,-65.6245,0:218:0:218:8123:0:0,218	1/1:-2112.3,-202.894,0:674:0:674:24797:0:0,674	1/1:-1615.54,-156.837,0:521:0:521:18920:0	1/1:-1739.55,-170.383,0:567:0:566:20629:0:0,566	1/1:-894.914,-87.9008,0:292:0:292:10612:0	1/1:-1948.19,-187.241,0:622:0:622:22906:0	1/1:-1014.71,-96.6306,0:321:0:321:11908:0	1/1:-1041.91,-98.4368,0:327:0:327:12162:0	1/1:-1176.09,-111.682,0:371:0:371:13821:0	1/1:-1076.82,-102.35,0:340:0:340:12658:0	1/1:-1066.34,-99.3716,0:342:1:341:12633:37	1/1:-660.228,-62.0122,0:206:0:206:7698:0	1/1:-1206.83,-116.8,0:388:0:388:14286:0
+chr11	128782112	.	C	T	4857.95	.	AB=0.526171;ABP=5.16981;AC=1;AF=0.5;AN=2;AO=191;CIGAR=1X;DP=363;DPB=363;DPRA=0;EPP=11.2983;EPPR=3.0608;GTI=0;LEN=1;MEANALT=1;MQM=41.7644;MQMR=41.8605;NS=1;NUMALT=1;ODDS=952.539;PAIRED=0.994764;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=7043;QR=6226;RO=172;RPL=120;RPP=30.3072;RPPR=61.3876;RPR=71;RUN=1;SAF=74;SAP=24.0315;SAR=117;SF=5;SRF=55;SRP=51.5402;SRR=117;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	0/1:-498.789,0,-431.828:363:172:191:7043:6226:172,191	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr11	128786294	.	G	A	2966.77	.	AB=0;ABP=0;AC=66;AF=1;AN=74;AO=162;CIGAR=1X;DP=4281;DPB=163;DPRA=0;EPP=20.3821;EPPR=5.18177;GTI=0;LEN=1;MEANALT=1;MQM=41.4198;MQMR=42;NS=1;NUMALT=1;ODDS=223.875;PAIRED=0.993827;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=5995;QR=16;RO=1;RPL=42;RPP=84.5612;RPPR=5.18177;RPR=120;RUN=1;SAF=105;SAP=33.8935;SAR=57;SF=0,1,2,3,4,5,6,7,8,9,10,11,12,13,14,15,16,17,18,19,20,21,22,23,24,25,26,27,28,29,30,31,32,33,34,35,36;SRF=1;SRP=5.18177;SRR=0;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	1/1:-510.765,-47.469,0:163:1:162:5995:16:1,162	0/1:-36.6546,0,-48.8553:33:18:15:535:674	1/1:-323.869,-30.711,0:107:1:106:3768:15	0/1:-142.757,0,-116.983:102:47:55:2007:1712:47,55	0/1:-148.586,0,-247.164:156:92:64:2348:3408	1/1:-323.212,-25.2667,0:107:2:105:3892:76:2,105	0/1:-195.659,0,-103.609:120:44:76:2720:1612:44,76	1/1:-468.53,-45.1545,0:150:0:150:5456:0	1/1:-365.069,-35.2205,0:120:0:117:4223:0	1/1:-362.519,-33.7154,0:113:0:112:4206:0:0,112	1/1:-303.44,-29.1999,0:97:0:97:3566:0:0,97	1/1:-509.991,-49.3689,0:165:0:164:5931:0	1/1:-361.468,-35.5215,0:118:0:118:4312:0:0,118	1/1:-462.055,-45.7001,0:156:1:155:5460:13	1/1:-306.464,-29.802,0:100:0:99:3600:0	1/1:-332,-32.2102,0:107:0:107:3927:0	1/1:-440.8,-40.5453,0:140:1:139:5163:16:1,139	1/1:-376.745,-36.4246,0:121:0:121:4423:0	1/1:-244.262,-23.4803,0:78:0:78:2855:0	1/1:-346.346,-32.8123,0:110:0:109:4073:0	0/1:-160.826,0,-191.131:140:75:64:2405:2706:75,64	1/1:-196.227,-19.2659,0:64:0:64:2255:0:0,64	1/1:-244.575,-23.7814,0:79:0:79:2828:0	1/1:-377.999,-36.1236,0:120:0:120:4397:0	1/1:-181.354,-17.7608,0:59:0:59:2148:0:0,59	1/1:-571.911,-56.2926,0:188:0:187:6795:0:0,187	1/1:-542.66,-53.2823,0:177:0:177:6434:0	1/1:-537.477,-46.989,0:178:2:174:6343:67:2,174	1/1:-221.31,-20.7711,0:69:0:69:2557:0	0/1:-259.34,0,-229.735:203:95:107:3868:3443	1/1:-262.783,-24.6845,0:82:0:82:3071:0	1/1:-328.862,-32.2102,0:107:0:107:3871:0	1/1:-316.177,-31.0061,0:103:0:103:3682:0	1/1:-337.998,-33.1133,0:110:0:110:3989:0	0/1:-77.3789,0,-144.422:90:57:32:1206:2069	1/1:-139.839,-14.1484,0:47:0:47:1692:0	0/1:-122.094,0,-129.61:102:52:47:1784:1858
+chr12	2224511	.	C	T	3355.30	.	AB=0.517685;ABP=3.85515;AC=2;AF=0.5;AN=4;AO=161;CIGAR=1X;DP=545;DPB=311;DPRA=0;EPP=5.28967;EPPR=3.0103;GTI=0;LEN=1;MEANALT=2;MQM=41.1553;MQMR=41.5878;NS=1;NUMALT=1;ODDS=750.246;PAIRED=0.993789;PAIREDR=0.993243;PAO=0;PQA=0;PQR=0;PRO=0;QA=5586;QR=5081;RO=148;RPL=22;RPP=187.639;RPPR=138.228;RPR=139;RUN=1;SAF=92;SAP=10.1451;SAR=69;SF=20,36;SRF=96;SRP=31.4155;SRR=52;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-389.542,0,-350.266:311:148:161:5586:5081:148,161	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-331.423,0,-220.203:234:97:136:4654:3328
+chr12	2229476	.	G	A	864.38	.	AB=0.402778;ABP=8.92153;AC=2;AF=0.5;AN=4;AO=29;CIGAR=1X;DP=165;DPB=72;DPRA=0;EPP=6.67934;EPPR=7.10075;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=41.5349;NS=1;NUMALT=1;ODDS=145.175;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1068;QR=1616;RO=43;RPL=8;RPP=15.6647;RPPR=9.12072;RPR=21;RUN=1;SAF=17;SAP=4.88226;SAR=12;SF=20,36;SRF=25;SRP=5.48477;SRR=18;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-70.9661,0,-117.107:72:43:29:1068:1616:43,29	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-120.813,0,-126.325:93:48:45:1719:1778
+chr12	2558186	.	G	A	2816.43	.	AB=0.517045;ABP=3.45446;AC=21;AF=0.5;AN=36;AO=91;CIGAR=1X;DP=3111;DPB=176;DPRA=0;EPP=9.90651;EPPR=3.64897;GTI=0;LEN=1;MEANALT=1;MQM=41.7363;MQMR=42;NS=1;NUMALT=1;ODDS=475.634;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3467;QR=3088;RO=85;RPL=54;RPP=9.90651;RPPR=6.10145;RPR=37;RUN=1;SAF=33;SAP=17.9243;SAR=58;SF=4,5,10,12,16,17,18,20,24,26,27,29,31,32,33,34,35,36;SRF=28;SRP=24.4951;SRR=57;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	0/1:-244.926,0,-215.558:176:85:91:3467:3088	0/1:-234.755,0,-222.696:180:89:90:3364:3185:89,90	.	.	.	.	1/1:-573.551,-53.5833,0:179:0:178:6650:0:0,178	.	0/1:-309.949,0,-307.175:238:120:118:4419:4364:120,118	.	.	.	0/1:-228.36,0,-230.879:176:90:85:3260:3260:90,85	1/1:-663.288,-61.7112,0:207:0:205:7687:0	0/1:-125.779,0,-94.2217:86:39:47:1767:1372	.	0/1:-258.666,0,-210.671:186:85:100:3679:3060:85,100	.	.	.	0/1:-114.84,0,-80.5353:74:32:42:1584:1178:32,42	.	0/1:-322.217,0,-230.891:220:96:124:4539:3402	0/1:-376.018,0,-276.93:262:116:145:5252:4111:116,145	.	0/1:-326.365,0,-402.416:289:158:131:4821:5639	.	0/1:-216.478,0,-182.116:155:72:82:3053:2624	0/1:-189.707,0,-175.648:140:69:71:2685:2500	0/1:-173.762,0,-172.486:133:66:67:2484:2443	0/1:-236.163,0,-164.335:154:66:88:3274:2420	0/1:-97.4559,0,-137.052:89:51:38:1436:1882	1/1:-535.226,-50.272,0:167:0:167:6225:0
+chr12	2558298	.	GTT	ATC	2248.76	.	AB=0.45098;ABP=6.20364;AC=22;AF=0.5;AN=36;AO=69;CIGAR=1X1M1X;DP=2587;DPB=153;DPRA=0;EPP=4.55236;EPPR=19.3617;GTI=0;LEN=3;MEANALT=2;MQM=41.913;MQMR=42;NS=1;NUMALT=1;ODDS=351.651;PAIRED=0.985507;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2457;QR=3145;RO=83;RPL=58;RPP=72.5289;RPPR=82.1513;RPR=11;RUN=1;SAF=27;SAP=10.0912;SAR=42;SF=4,5,10,12,16,17,18,20,24,26,27,29,31,32,33,34,35,36;SRF=44;SRP=3.66436;SRR=39;TYPE=complex	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	0/1:-167.592,0,-226.033:153:83:69:2457:3145	0/1:-223.61,0,-175.514:154:70:83:3015:2567:70,83	.	.	.	.	1/1:-431.449,-40.9401,0:132:0:131:4831:0:0,131	.	0/1:-292.804,0,-243.239:206:94:110:3996:3534:94,110	.	.	.	1/1:-494.887,-46.6597,0:154:0:149:5494:0:0,149	1/1:-445.134,-43.0473,0:139:0:138:4947:0	0/1:-101.223,0,-161.668:98:59:39:1435:2212	.	0/1:-211.102,0,-197.632:157:75:82:2971:2848:75,82	.	.	.	0/1:-133.23,0,-77.7401:80:32:48:1740:1177:32,48	.	0/1:-186.077,0,-254.658:174:95:79:2632:3519	0/1:-318.982,0,-229.056:222:95:123:4374:3430:95,123	.	0/1:-276.14,0,-297.536:227:116:110:3785:4260	.	0/1:-147.852,0,-176.337:127:67:56:1995:2472	0/1:-162.467,0,-167.071:126:63:62:2278:2369	0/1:-68.6518,0,-160.079:89:58:31:1057:2158	0/1:-156.663,0,-153.851:121:59:62:2167:2201	0/1:-122.496,0,-138.036:99:53:46:1683:1938	1/1:-403.153,-39.1339,0:129:0:128:4577:0
+chr12	2595358	.	C	T	4817.79	.	AB=0.460993;ABP=8.60069;AC=1;AF=0.5;AN=2;AO=195;CIGAR=1X;DP=423;DPB=423;DPRA=0;EPP=15.1371;EPPR=42.0206;GTI=0;LEN=1;MEANALT=1;MQM=41.6359;MQMR=41.8026;NS=1;NUMALT=1;ODDS=1109.34;PAIRED=0.989744;PAIREDR=0.986842;PAO=0;PQA=0;PQR=0;PRO=0;QA=7194;QR=8454;RO=228;RPL=105;RPP=5.51585;RPPR=4.877;RPR=90;RUN=1;SAF=106;SAP=6.22853;SAR=89;SF=12;SRF=119;SRP=3.9627;SRR=109;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-491.262,0,-603.829:423:228:195:7194:8454:228,195	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr12	2613589	.	T	G	2817.20	.	AB=0.454902;ABP=7.51504;AC=1;AF=0.5;AN=2;AO=116;CIGAR=1X;DP=255;DPB=255;DPRA=0;EPP=15.6647;EPPR=23.4033;GTI=0;LEN=1;MEANALT=2;MQM=41.9828;MQMR=42;NS=1;NUMALT=1;ODDS=648.684;PAIRED=1;PAIREDR=0.992754;PAO=0;PQA=0;PQR=0;PRO=0;QA=4293;QR=5050;RO=138;RPL=35;RPP=42.621;RPPR=30.7674;RPR=81;RUN=1;SAF=76;SAP=27.2709;SAR=40;SF=4;SRF=87;SRP=23.4033;SRR=51;TYPE=snp	GT:GL:DP:RO:AO:QA:QR	.	.	.	.	0/1:-296.572,0,-360.662:255:138:116:4293:5050	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr12	2613716	.	C	T	6160.80	.	AB=0.5;ABP=3.0103;AC=11;AF=0.5;AN=18;AO=152;CIGAR=1X;DP=3271;DPB=304;DPRA=0;EPP=6.66752;EPPR=5.44062;GTI=0;LEN=1;MEANALT=2;MQM=42;MQMR=42;NS=1;NUMALT=1;ODDS=860.437;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=5768;QR=5621;RO=151;RPL=116;RPP=94.4407;RPPR=132.795;RPR=36;RUN=1;SAF=64;SAP=11.239;SAR=88;SF=0,4,8,12,13,14,23,27,31;SRF=62;SRP=13.4938;SRR=89;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	0/1:-406.658,0,-395.776:304:151:152:5768:5621:151,152	.	.	.	0/1:-604.905,0,-500.337:428:198:229:8572:7262	.	.	.	0/1:-387.813,0,-351.129:287:136:150:5485:5048	.	.	.	1/1:-1621.47,-150.515,0:500:0:500:18773:0:0,500	0/1:-576.749,0,-484.529:422:197:224:8153:7082	1/1:-848.943,-79.773,0:265:0:265:9837:0	.	.	.	.	.	.	.	.	0/1:-478.235,0,-442.376:357:173:183:6796:6339	.	.	.	0/1:-528.655,0,-545.919:429:214:212:7593:7790:214,212	.	.	.	0/1:-348.475,0,-370.013:279:145:134:5002:5243	.	.	.	.	.
+chr12	2614070	.	G	T	3502.66	.	AB=0.566265;ABP=12.5072;AC=1;AF=0.5;AN=2;AO=141;CIGAR=1X;DP=249;DPB=249;DPRA=0;EPP=4.25774;EPPR=4.2971;GTI=0;LEN=1;MEANALT=1;MQM=41.8582;MQMR=42;NS=1;NUMALT=1;ODDS=608.165;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=5009;QR=4029;RO=108;RPL=74;RPP=3.76493;RPPR=4.2971;RPR=67;RUN=1;SAF=87;SAP=19.7815;SAR=54;SF=31;SRF=68;SRP=18.7736;SRR=40;TYPE=snp	GT:GL:DP:RO:AO:QA:QR	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-359.911,0,-273.55:249:108:141:5009:4029	.	.	.	.	.
+chr12	2659082	.	G	T	4409.23	.	AB=0.480769;ABP=4.01252;AC=23;AF=0.5;AN=40;AO=150;CIGAR=1X;DP=5964;DPB=312;DPRA=0;EPP=7.70068;EPPR=18.5055;GTI=0;LEN=1;MEANALT=1;MQM=41.3867;MQMR=41.9877;NS=1;NUMALT=1;ODDS=838.379;PAIRED=0.993333;PAIREDR=0.993827;PAO=0;PQA=0;PQR=0;PRO=0;QA=5607;QR=5999;RO=162;RPL=32;RPP=110.078;RPPR=48.1019;RPR=118;RUN=1;SAF=96;SAP=28.5468;SAR=54;SF=3,4,6,7,8,10,11,16,17,20,21,23,24,25,26,27,29,30,33,34;SRF=94;SRP=12.0715;SRR=68;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	0/1:-385.448,0,-424.679:312:162:150:5607:5999:162,150	0/1:-504.356,0,-505.718:389:192:197:7206:7232	.	0/1:-225.155,0,-285.609:195:107:88:3285:3994:107,88	1/1:-1404.42,-132.754,0:441:0:441:16372:0	0/1:-445.997,0,-240.625:261:99:162:6139:3694	.	1/1:-832.422,-77.0637,0:256:0:256:9647:0:0,256	0/1:-315.308,0,-430.554:297:167:130:4685:5997	.	.	.	.	0/1:-369.085,0,-399.064:293:150:143:5332:5659:150,143	0/1:-437.526,0,-461.226:350:179:171:6299:6552	.	.	0/1:-459.619,0,-470.715:358:179:178:6628:6695:179,178	0/1:-66.3402,0,-246.041:127:93:34:1204:3273:93,34	.	0/1:-356.199,0,-469.547:315:176:139:5234:6530	0/1:-153.562,0,-161.722:117:60:57:2183:2273:60,57	0/1:-465.453,0,-525.727:388:202:184:6773:7465:202,184	0/1:-430.736,0,-436.497:354:178:173:6253:6272	0/1:-421.106,0,-462.34:350:178:171:6143:6567:178,171	.	0/1:-389.836,0,-609.118:397:227:167:5922:8412	1/1:-819.449,-77.0637,0:256:0:256:9484:0	.	.	0/1:-299.833,0,-337.073:247:128:119:4335:4766	0/1:-381.719,0,-293.381:261:116:145:5363:4311	.	.
+chr12	2694638	.	C	T	999.79	.	AB=0;ABP=0;AC=9;AF=1;AN=16;AO=100;CIGAR=1X;DP=635;DPB=101;DPRA=0;EPP=10.0459;EPPR=0;GTI=0;LEN=1;MEANALT=2;MQM=41.05;MQMR=0;NS=1;NUMALT=1;ODDS=143.235;PAIRED=0.94;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=3336;QR=0;RO=0;RPL=54;RPP=4.40004;RPPR=0;RPR=46;RUN=1;SAF=35;SAP=22.5536;SAR=65;SF=4,7,14,16,17,25,32,34;SRF=0;SRP=0;SRR=0;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	1/1:-284.679,-30.103,0:101:0:100:3336:0	.	.	0/1:-107.478,0,-90.7889:85:39:44:1549:1328	.	.	.	.	.	.	0/1:-67.2837,0,-110.88:76:46:30:1032:1529	.	0/1:-82.3395,0,-105.689:82:44:37:1241:1492:44,37	0/1:-108.29,0,-70.2251:79:34:42:1512:1068	.	.	.	.	.	.	.	0/1:-100.252,0,-98.0582:93:45:45:1462:1430:45,45	.	.	.	.	.	.	0/1:-41.6888,0,-89.288:60:37:23:682:1230	.	0/1:-69.6602,0,-64.1514:59:29:29:1011:937	.	.
+chr12	2706687	.	C	T	2145.16	.	AB=0.541935;ABP=5.37791;AC=1;AF=0.5;AN=2;AO=84;CIGAR=1X;DP=155;DPB=155;DPRA=0;EPP=3.42391;EPPR=5.48761;GTI=0;LEN=1;MEANALT=1;MQM=41.75;MQMR=41.662;NS=1;NUMALT=1;ODDS=408.678;PAIRED=0.988095;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3121;QR=2680;RO=71;RPL=51;RPP=11.386;RPPR=4.50892;RPR=33;RUN=1;SAF=45;SAP=3.94093;SAR=39;SF=8;SRF=39;SRP=4.50892;SRR=32;TYPE=snp	GT:GL:DP:RO:AO:QA:QR	.	.	.	.	.	.	.	.	0/1:-222.097,0,-184.532:155:71:84:3121:2680	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr12	2706720	.	G	C	4598.91	.	AB=0;ABP=0;AC=73;AF=1;AN=74;AO=150;CIGAR=1X;DP=5557;DPB=150;DPRA=0;EPP=82.2835;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=41.88;MQMR=0;NS=1;NUMALT=1;ODDS=212.549;PAIRED=0.993333;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=5656;QR=0;RO=0;RPL=94;RPP=23.9143;RPPR=0;RPR=56;RUN=1;SAF=62;SAP=12.7964;SAR=88;SF=0,1,2,3,4,5,6,7,8,9,10,11,12,13,14,15,16,17,18,19,20,21,22,23,24,25,26,27,28,29,30,31,32,33,34,35,36;SRF=0;SRP=0;SRR=0;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	1/1:-488.659,-45.1545,0:150:0:150:5656:0:0,150	0/1:-63.297,0,-85.709:57:32:24:929:1182	1/1:-378.409,-34.9195,0:116:0:116:4392:0	1/1:-472.438,-43.6494,0:145:0:145:5468:0:0,145	1/1:-502.688,-47.2617,0:159:0:157:5817:0	1/1:-495.317,-46.6597,0:155:0:155:5732:0:0,155	1/1:-383.892,-35.8226,0:119:0:119:4440:0:0,119	1/1:-483.961,-46.6597,0:155:0:155:5592:0	1/1:-388.945,-36.1236,0:120:0:120:4501:0	1/1:-401.127,-37.3277,0:124:0:124:4651:0:0,124	1/1:-411.419,-38.5318,0:128:0:128:4777:0:0,128	1/1:-749.871,-71.9462,0:239:0:239:8676:0	1/1:-622.421,-57.4967,0:191:0:191:7219:0:0,191	1/1:-817.716,-77.0637,0:256:0:256:9466:0	1/1:-349.962,-32.8123,0:109:0:109:4062:0	1/1:-452.994,-42.0504,0:145:1:144:5259:16	1/1:-449.187,-42.1442,0:140:0:140:5220:0:0,140	1/1:-512.484,-48.4658,0:162:0:161:5927:0	1/1:-405.172,-37.9298,0:126:0:126:4690:0	1/1:-420.942,-40.338,0:136:0:134:4863:0	1/1:-527.012,-48.7669,0:162:0:162:6099:0:0,162	1/1:-338.677,-32.2102,0:108:0:107:3913:0:0,107	1/1:-352.229,-33.7154,0:113:0:112:4067:0	1/1:-399.983,-37.3277,0:124:0:124:4624:0	1/1:-171.494,-15.6536,0:52:0:52:1982:0:0,52	1/1:-872.619,-82.1812,0:273:0:273:10097:0:0,273	1/1:-731.066,-69.839,0:234:0:232:8478:0	1/1:-806.944,-76.7627,0:256:0:255:9346:0:0,255	1/1:-418.807,-40.338,0:134:0:134:4855:0	1/1:-728.835,-69.5379,0:231:0:231:8433:0	1/1:-502.702,-46.9607,0:156:0:156:5811:0	1/1:-496.061,-46.6597,0:156:0:155:5762:0	1/1:-520.711,-48.4658,0:161:0:161:6020:0	1/1:-430.328,-38.5378,0:133:1:132:4992:15	1/1:-370.854,-34.3174,0:114:0:114:4305:0	1/1:-326.366,-29.802,0:99:0:99:3775:0	1/1:-380.508,-35.8226,0:119:0:119:4440:0
+chr12	2715862	.	G	A	2769.83	.	AB=0.497797;ABP=3.01987;AC=1;AF=0.5;AN=2;AO=113;CIGAR=1X;DP=227;DPB=227;DPRA=0;EPP=17.0192;EPPR=17.0192;GTI=0;LEN=1;MEANALT=2;MQM=42;MQMR=42;NS=1;NUMALT=1;ODDS=637.778;PAIRED=0.99115;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=4084;QR=4102;RO=113;RPL=75;RPP=29.3178;RPPR=9.94748;RPR=38;RUN=1;SAF=56;SAP=3.02952;SAR=57;SF=24;SRF=59;SRP=3.49071;SRR=54;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-286.741,0,-289.224:227:113:113:4084:4102:113,113	.	.	.	.	.	.	.	.	.	.	.	.
+chr12	2721131	.	C	A	4949.76	.	AB=0.476744;ABP=5.03027;AC=1;AF=0.5;AN=2;AO=205;CIGAR=1X;DP=430;DPB=430;DPRA=0;EPP=3.27511;EPPR=9.09627;GTI=0;LEN=1;MEANALT=3;MQM=41.8;MQMR=41.6099;NS=1;NUMALT=1;ODDS=1139.73;PAIRED=0.995122;PAIREDR=0.991031;PAO=0;PQA=0;PQR=0;PRO=0;QA=7297;QR=8019;RO=223;RPL=105;RPP=3.27511;RPPR=3.25374;RPR=100;RUN=1;SAF=109;SAP=4.80044;SAR=96;SF=11;SRF=110;SRP=3.09794;SRR=113;TYPE=snp	GT:GL:DP:RO:AO:QA:QR	.	.	.	.	.	.	.	.	.	.	.	0/1:-502.549,0,-565.355:430:223:205:7297:8019	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr12	2721137	.	C	T	5169.18	.	AB=0;ABP=0;AC=19;AF=1;AN=32;AO=404;CIGAR=1X;DP=5335;DPB=404;DPRA=0;EPP=3.3543;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=41.7426;MQMR=0;NS=1;NUMALT=1;ODDS=564.668;PAIRED=0.997525;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=15001;QR=0;RO=0;RPL=176;RPP=17.5441;RPPR=0;RPR=228;RUN=1;SAF=224;SAP=13.4162;SAR=180;SF=4,7,10,14,16,17,21,23,24,25,26,29,30,31,32,34;SRF=0;SRP=0;SRR=0;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	1/1:-1293.59,-121.616,0:404:0:404:15001:0	.	.	0/1:-508.954,0,-616.788:439:237:202:7420:8649	.	.	0/1:-489.716,0,-450.376:364:176:188:6921:6462:176,188	.	.	.	1/1:-769.647,-70.0288,0:245:1:244:8987:39	.	0/1:-419.584,0,-523.829:365:199:166:6147:7320:199,166	1/1:-1318.38,-122.519,0:408:0:407:15323:0	.	.	.	0/1:-101.056,0,-266.913:145:101:44:1670:3590:101,44	.	0/1:-453.499,0,-557.694:392:210:179:6590:7818	0/1:-188.074,0,-191.719:147:75:72:2684:2718:75,72	0/1:-638.084,0,-724.239:533:281:252:9252:10209:281,252	0/1:-487.81,0,-467.294:397:196:199:7022:6804	.	.	0/1:-554.122,0,-644.231:480:254:226:8048:9126	0/1:-295.487,0,-367.282:255:140:115:4305:5146	0/1:-268.583,0,-282.611:223:113:109:3863:4041	0/1:-340.572,0,-409.479:291:157:134:4941:5746	.	0/1:-279.998,0,-359.936:247:137:110:4105:5041	.	.
+chr12	2757752	.	AGAGTCCCT	AGAGCCCCT	724.61	.	AB=0;ABP=0;AC=2;AF=1;AN=2;AO=32;CIGAR=4M1X4M;DP=42;DPB=42;DPRA=0;EPP=16.3106;EPPR=0;GTI=0;LEN=1;MEANALT=7;MQM=37.8125;MQMR=0;NS=1;NUMALT=1;ODDS=32.6753;PAIRED=0.90625;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=976;QR=0;RO=0;RPL=28;RPP=42.0968;RPPR=0;RPR=4;RUN=1;SAF=5;SAP=35.8538;SAR=27;SF=24;SRF=0;SRP=0;SRR=0;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	1/1:-84.0518,-9.63296,0:42:0:32:976:0:0,32	.	.	.	.	.	.	.	.	.	.	.	.
+chr12	2757755	.	GTCCCT	GCCCCT	1819.84	.	AB=0;ABP=0;AC=4;AF=1;AN=4;AO=69;CIGAR=1M1X4M;DP=182;DPB=94.1667;DPRA=0;EPP=3.04177;EPPR=0;GTI=0;LEN=1;MEANALT=8;MQM=38.1304;MQMR=0;NS=1;NUMALT=1;ODDS=53.0789;PAIRED=0.971014;PAIREDR=0;PAO=3.16667;PQA=67.6667;PQR=61.6667;PRO=2.66667;QA=2104;QR=0;RO=0;RPL=51;RPP=37.2818;RPPR=0;RPR=18;RUN=1;SAF=16;SAP=46.0936;SAR=53;SF=6,9;SRF=0;SRP=0;SRR=0;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	1/1:-181.485,-28.5978,0:92:0:69:2104:0:0,69	.	.	1/1:-205.539,-33.7154,0:90:0:74:2389:0:0,74	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr12	2760898	.	C	T	4564.55	.	AB=0.523669;ABP=4.65497;AC=3;AF=0.5;AN=6;AO=177;CIGAR=1X;DP=1183;DPB=338;DPRA=0;EPP=7.43912;EPPR=4.6628;GTI=0;LEN=1;MEANALT=2;MQM=41.3672;MQMR=41.7421;NS=1;NUMALT=1;ODDS=847.572;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=6182;QR=5596;RO=159;RPL=104;RPP=14.8;RPPR=17.8828;RPR=73;RUN=1;SAF=49;SAP=79.5762;SAR=128;SF=13,23,29;SRF=40;SRP=88.244;SRR=119;TYPE=snp	GT:GL:DP:RO:AO:QA:QR	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-434.683,0,-385.77:338:159:177:6182:5596	.	.	.	.	.	.	.	.	.	0/1:-439.7,0,-459.435:354:181:172:6309:6508	.	.	.	.	.	0/1:-551.987,0,-624.029:491:260:230:8057:8861	.	.	.	.	.	.	.
+chr12	2774833	.	T	C	6608.27	.	AB=0.521385;ABP=4.96064;AC=1;AF=0.5;AN=2;AO=256;CIGAR=1X;DP=491;DPB=491;DPRA=0;EPP=29.6108;EPPR=25.1963;GTI=0;LEN=1;MEANALT=1;MQM=41.8438;MQMR=42;NS=1;NUMALT=1;ODDS=1410.45;PAIRED=1;PAIREDR=0.995745;PAO=0;PQA=0;PQR=0;PRO=0;QA=9486;QR=8929;RO=235;RPL=107;RPP=17.9731;RPPR=8.78549;RPR=149;RUN=1;SAF=131;SAP=3.31566;SAR=125;SF=17;SRF=118;SRP=3.01954;SRR=117;TYPE=snp	GT:GL:DP:RO:AO:QA:QR	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-672.572,0,-622.843:491:235:256:9486:8929	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr12	2778210	.	G	A	3495.63	.	AB=0.481967;ABP=3.87177;AC=1;AF=0.5;AN=2;AO=147;CIGAR=1X;DP=305;DPB=305;DPRA=0;EPP=4.20683;EPPR=5.70403;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=42;NS=1;NUMALT=1;ODDS=804.898;PAIRED=1;PAIREDR=0.993671;PAO=0;PQA=0;PQR=0;PRO=0;QA=5198;QR=5605;RO=158;RPL=99;RPP=41.4321;RPPR=13.7852;RPR=48;RUN=1;SAF=66;SAP=6.33398;SAR=81;SF=0;SRF=73;SRP=4.98936;SRR=85;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	0/1:-360.882,0,-396.841:305:158:147:5198:5605:158,147	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr12	2786236	.	CTC	CC	56.48	.	AB=0.236842;ABP=25.8679;AC=1;AF=0.5;AN=2;AO=9;CIGAR=1M1D1M;DP=38;DPB=35;DPRA=0;EPP=9.04217;EPPR=3.09716;GTI=0;LEN=1;MEANALT=3;MQM=40;MQMR=42;NS=1;NUMALT=1;ODDS=13.004;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=273;QR=857;RO=25;RPL=1;RPP=14.8328;RPPR=28.1125;RPR=8;RUN=1;SAF=3;SAP=5.18177;SAR=6;SF=1;SRF=17;SRP=10.0459;SRR=8;TYPE=del	GT:GL:DP:RO:AO:QA:QR	.	0/1:-13.8558,0,-64.9362:38:25:9:273:857	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr12	2788615	.	C	T	1895.73	.	AB=0.519481;ABP=3.51792;AC=1;AF=0.5;AN=2;AO=80;CIGAR=1X;DP=154;DPB=154;DPRA=0;EPP=11.8048;EPPR=5.94472;GTI=0;LEN=1;MEANALT=1;MQM=41.7625;MQMR=42;NS=1;NUMALT=1;ODDS=381.38;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2988;QR=2644;RO=74;RPL=21;RPP=42.2054;RPPR=29.4201;RPR=59;RUN=1;SAF=70;SAP=100.727;SAR=10;SF=16;SRF=64;SRP=88.5781;SRR=10;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-211.687,0,-184.333:154:74:80:2988:2644:74,80	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr12	2788668	.	C	G	3296.19	.	AB=0.545098;ABP=7.51504;AC=1;AF=0.5;AN=2;AO=139;CIGAR=1X;DP=255;DPB=255;DPRA=0;EPP=3.02592;EPPR=3.68421;GTI=0;LEN=1;MEANALT=1;MQM=41.9424;MQMR=42;NS=1;NUMALT=1;ODDS=584.222;PAIRED=1;PAIREDR=0.991379;PAO=0;PQA=0;PQR=0;PRO=0;QA=4898;QR=4010;RO=116;RPL=46;RPP=37.5195;RPPR=39.2514;RPR=93;RUN=1;SAF=107;SAP=90.8846;SAR=32;SF=32;SRF=91;SRP=84.5528;SRR=25;TYPE=snp	GT:GL:DP:RO:AO:QA:QR	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-349.575,0,-273.198:255:116:139:4898:4010	.	.	.	.
+chr12	2788810	.	C	T	6097.68	.	AB=0.518868;ABP=4.64915;AC=6;AF=0.5;AN=12;AO=275;CIGAR=1X;DP=3243;DPB=530;DPRA=0;EPP=57.4077;EPPR=33.1254;GTI=0;LEN=1;MEANALT=3;MQM=41.9564;MQMR=41.9203;NS=1;NUMALT=1;ODDS=1437.15;PAIRED=1;PAIREDR=0.996016;PAO=0;PQA=0;PQR=0;PRO=0;QA=10203;QR=9187;RO=251;RPL=160;RPP=19.0002;RPPR=16.1689;RPR=115;RUN=1;SAF=116;SAP=17.6105;SAR=159;SF=6,11,12,21,22,31;SRF=101;SRP=23.782;SRR=150;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	0/1:-724.714,0,-638.161:530:251:275:10203:9187:251,275	.	.	.	.	0/1:-800.194,0,-868.321:690:352:336:11662:12403	0/1:-1257.09,0,-1244.21:993:496:497:18134:17795:496,497	.	.	.	.	.	.	.	.	0/1:-163.922,0,-685.881:338:253:85:3058:9054:253,85	0/1:-373.849,0,-378.196:303:152:151:5365:5388	.	.	.	.	.	.	.	.	0/1:-445.618,0,-532.086:389:207:182:6487:7472	.	.	.	.	.
+chr12	2788879	.	G	A	7172.06	.	AB=0;ABP=0;AC=44;AF=1;AN=62;AO=361;CIGAR=1X;DP=12025;DPB=362;DPRA=0;EPP=64.3709;EPPR=0;GTI=0;LEN=1;MEANALT=2;MQM=41.8753;MQMR=0;NS=1;NUMALT=1;ODDS=505.057;PAIRED=0.99723;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=13349;QR=0;RO=0;RPL=262;RPP=162.827;RPPR=0;RPR=99;RUN=1;SAF=105;SAP=140.162;SAR=256;SF=0,1,2,3,4,6,8,9,11,12,13,14,15,16,17,18,19,20,21,22,24,25,26,28,29,30,31,32,34,35,36;SRF=0;SRP=0;SRR=0;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	1/1:-1155.53,-108.672,0:362:0:361:13349:0:0,361	0/1:-164.656,0,-191.739:140:74:65:2379:2685	0/1:-544.188,0,-613.643:461:241:220:7898:8706	0/1:-568.288,0,-514.184:425:201:221:8057:7388:201,221	0/1:-737.027,0,-764.388:591:302:288:10568:10892	.	1/1:-972.18,-89.4546,0:309:1:307:11255:36:1,307	.	1/1:-1061.72,-102.35,0:340:0:340:12267:0	1/1:-1076.82,-103.253,0:344:0:343:12423:0:0,343	.	0/1:-623.973,0,-564.403:473:226:245:8907:8195	0/1:-790.47,0,-783.968:622:310:309:11296:11181:310,309	0/1:-493.415,0,-493.401:393:197:194:7042:7052	1/1:-931.927,-86.5483,0:298:1:297:10785:32	1/1:-1409.68,-135.765,0:451:0:451:16298:0	1/1:-1146.13,-106.169,0:366:1:363:13295:39:1,363	0/1:-721.067,0,-598.467:516:240:274:10123:8677	1/1:-832.44,-80.074,0:266:0:266:9606:0	1/1:-1450.54,-133.298,0:467:2:463:16865:76	0/1:-684.722,0,-801.311:587:314:271:9977:11387:314,271	0/1:-209.559,0,-276.295:189:105:84:3072:3828:105,84	0/1:-216.363,0,-248.113:182:96:86:3134:3481	.	1/1:-646.406,-60.8081,0:202:0:202:7463:0:0,202	0/1:-817.298,0,-737.558:614:292:319:11594:10606:292,319	0/1:-635.231,0,-609.33:526:253:270:9199:8842	.	0/1:-314.681,0,-345.1:271:142:129:4582:4933	0/1:-652.861,0,-873.296:616:343:273:9657:12196	0/1:-479.805,0,-483.513:368:186:182:6813:6848	0/1:-366.825,0,-350.935:286:141:144:5240:5030	0/1:-506.317,0,-512.319:412:207:203:7311:7344	.	1/1:-1111.7,-105.963,0:352:0:352:12856:0	1/1:-699.889,-65.0225,0:217:0:216:8076:0	1/1:-1181.22,-113.187,0:379:0:376:13637:0
+chr12	2789641	.	G	A	5059.32	.	AB=0.493716;ABP=3.20133;AC=1;AF=0.5;AN=2;AO=275;CIGAR=1X;DP=557;DPB=557;DPRA=0;EPP=3.96575;EPPR=5.81998;GTI=0;LEN=1;MEANALT=2;MQM=31.5455;MQMR=35.0036;NS=1;NUMALT=1;ODDS=1164.95;PAIRED=0.996364;PAIREDR=0.996416;PAO=0;PQA=0;PQR=0;PRO=0;QA=10219;QR=10327;RO=279;RPL=181;RPP=62.7771;RPPR=33.9012;RPR=94;RUN=1;SAF=117;SAP=16.2839;SAR=158;SF=17;SRF=130;SRP=5.81998;SRR=149;TYPE=snp	GT:GL:DP:RO:AO:QA:QR	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-520.843,0,-619.146:557:279:275:10219:10327	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr12	2789686	.	TC	CG	167.79	.	AB=0.241071;ABP=133.454;AC=1;AF=0.5;AN=2;AO=54;CIGAR=2X;DP=224;DPB=226;DPRA=0;EPP=55.1256;EPPR=26.768;GTI=0;LEN=2;MEANALT=2;MQM=29.8704;MQMR=32.3609;NS=1;NUMALT=1;ODDS=38.6352;PAIRED=1;PAIREDR=0.390533;PAO=0;PQA=0;PQR=100;PRO=4;QA=1921;QR=6230;RO=169;RPL=9;RPP=55.1256;RPPR=13.8163;RPR=45;RUN=1;SAF=54;SAP=120.27;SAR=0;SF=1;SRF=89;SRP=4.05106;SRR=80;TYPE=mnp	GT:GL:DP:RO:AO:QA:QR	.	0/1:-62.8201,0,-393.422:224:169:54:1921:6230	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr12	2789697	.	AGGAG	GGGAC	296.02	.	AB=0.259615;ABP=107.408;AC=1;AF=0.5;AN=2;AO=54;CIGAR=1X3M1X;DP=208;DPB=209.8;DPRA=0;EPP=30.1939;EPPR=15.7007;GTI=0;LEN=5;MEANALT=1;MQM=29.537;MQMR=31.8506;NS=1;NUMALT=1;ODDS=68.1621;PAIRED=1;PAIREDR=0.448052;PAO=0;PQA=0;PQR=65;PRO=3;QA=1925;QR=5590;RO=154;RPL=14;RPP=30.1939;RPPR=5.77399;RPR=40;RUN=1;SAF=54;SAP=120.27;SAR=0;SF=1;SRF=88;SRP=9.83493;SRR=66;TYPE=complex	GT:GL:DP:RO:AO:QA:QR	.	0/1:-67.432,0,-346.135:208:154:54:1925:5590	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr12	2789718	.	CT	TG	344.00	.	AB=0.278689;ABP=80.8629;AC=1;AF=0.5;AN=2;AO=51;CIGAR=2X;DP=183;DPB=183;DPRA=0;EPP=3.05288;EPPR=5.41562;GTI=0;LEN=2;MEANALT=3;MQM=29.1961;MQMR=31.1462;NS=1;NUMALT=1;ODDS=79.2093;PAIRED=1;PAIREDR=0.530769;PAO=0;PQA=0;PQR=0;PRO=0;QA=1751;QR=4727;RO=130;RPL=26;RPP=3.05288;RPPR=3.27756;RPR=25;RUN=1;SAF=51;SAP=113.755;SAR=0;SF=1;SRF=78;SRP=14.302;SRR=52;TYPE=mnp	GT:GL:DP:RO:AO:QA:QR	.	0/1:-62.5961,0,-279.171:183:130:51:1751:4727	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr12	2789737	.	G	C	39.24	.	AB=0.22191;ABP=242.141;AC=1;AF=0.5;AN=2;AO=79;CIGAR=1X;DP=356;DPB=356;DPRA=0;EPP=112.106;EPPR=11.5472;GTI=0;LEN=1;MEANALT=1;MQM=29.8861;MQMR=30.7509;NS=1;NUMALT=1;ODDS=9.03415;PAIRED=1;PAIREDR=0.509025;PAO=0;PQA=0;PQR=0;PRO=0;QA=2860;QR=9833;RO=277;RPL=71;RPP=112.106;RPPR=6.46741;RPR=8;RUN=1;SAF=79;SAP=174.557;SAR=0;SF=28;SRF=141;SRP=3.20628;SRR=136;TYPE=snp	GT:GL:DP:RO:AO:QA:QR	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-83.0585,0,-582.828:356:277:79:2860:9833	.	.	.	.	.	.	.	.
+chr12	2789755	.	TC	CT	122.49	.	AB=0.316176;ABP=42.9271;AC=1;AF=0.5;AN=2;AO=43;CIGAR=2X;DP=136;DPB=136;DPRA=0;EPP=96.3836;EPPR=28.9964;GTI=0;LEN=2;MEANALT=2;MQM=27.9302;MQMR=28.3297;NS=1;NUMALT=1;ODDS=28.2046;PAIRED=1;PAIREDR=0.56044;PAO=0;PQA=0;PQR=0;PRO=0;QA=1522;QR=3259;RO=91;RPL=43;RPP=96.3836;RPPR=35.6778;RPR=0;RUN=1;SAF=43;SAP=96.3836;SAR=0;SF=1;SRF=51;SRP=5.89764;SRR=40;TYPE=mnp	GT:GL:DP:RO:AO:QA:QR	.	0/1:-58.0326,0,-171.923:136:91:43:1522:3259	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr12	2791130	.	CGA	TGG,CGG	11791.42	.	AB=0;ABP=0;AC=62,1;AF=1;AN=72;AO=486;CIGAR=1X1M1X;DP=16477;DPB=493;DPRA=0;EPP=10.1592;EPPR=5.18177;GTI=0;LEN=3;MEANALT=3;MQM=39.7675;MQMR=42;NS=1;NUMALT=1;ODDS=676.458;PAIRED=1;PAIREDR=1;PAO=12;PQA=228;PQR=0;PRO=0;QA=17940;QR=37;RO=1;RPL=248;RPP=3.4571;RPPR=5.18177;RPR=238;RUN=1;SAF=267;SAP=13.3047;SAR=219;SF=0,1,2,3,4,5,6,7,8,9,10,11,12,13,14,15,16,17,18,19,20,21,22,23,24,25,26,27,28,29,30,31,32,34,35,36;SRF=1;SRP=5.18177;SRR=0;TYPE=complex	GT:GL:DP:RO:AO:QA:QR:AD	1/1:-1503.84,-146.965,0,.,.,.:489:1:486,.:17940,.:37:1,486	0/1:-225.971,0,-195.816,.,.,.:179:78:99,.:3566,.:2926	1/1:-1498.65,-153.224,0,.,.,.:510:0:506,.:18351,.:0	1/1:-1746.25,-177.608,0,.,.,.:572:0:567,.:20897,.:0:0,567	1/1:-1835.35,-186.338,0,.,.,.:614:0:613,.:22322,.:0	1/1:-1903.49,-197.476,0,.,.,.:636:0:634,.:23396,.:0:0,634	1/1:-1155.54,-117.703,0,.,.,.:387:0:385,.:14201,.:0:0,385	0/1:-827.556,0,-642.756,.,.,.:613:263:346,.:12450,.:9589	1/1:-1193.15,-119.553,0,.,.,.:405:1:403,.:14751,.:29	1/1:-1350.33,-136.367,0,.,.,.:445:0:445,.:16484,.:0:0,445	0/1:-779.781,0,-473.121,.,.,.:512:201:310,.:11435,.:7354:201,310	0/1:-671.198,0,-506.335,.,.,.:485:213:269,.:9632,.:7601	1/1:-2232.94,-230.89,0,.,.,.:742:0:739,.:27296,.:0:0,739	1/1:-1586.12,-164.663,0,.,.,.:534:0:532,.:18960,.:0	1/1:-1122.88,-111.983,0,.,.,.:372:0:372,.:13614,.:0	1/1:-1635.91,-173.092,0,.,.,.:563:0:561,.:20265,.:0	1/1:-1542.23,-159.847,0,.,.,.:520:0:520,.:19107,.:0:0,520	1/2:-1600.85,-783.54,-685.705,-822.221,0,-733.418:594:0:311,281:11339,10372:0	1/1:-814.97,-85.1915,0,.,.,.:278:0:275,.:9824,.:0	1/1:-1523.71,-157.74,0,.,.,.:522:0:519,.:18677,.:0	1/1:-1666.89,-166.169,0,.,.,.:553:0:552,.:20460,.:0:0,552	1/1:-520.405,-53.5833,0,.,.,.:176:0:176,.:6408,.:0:0,176	1/1:-629.3,-64.1194,0,.,.,.:212:0:211,.:7493,.:0	0/1:-701.463,0,-592.779,.,.,.:538:235:302,.:10790,.:8668	1/1:-672.544,-69.839,0,.,.,.:225:0:224,.:8214,.:0:0,224	1/1:-1867.47,-189.348,0,.,.,.:629:0:625,.:22702,.:0:0,625	1/1:-1544.97,-164.362,0,.,.,.:547:0:542,.:18794,.:0	0/1:-671.435,0,-458.003,.,.,.:466:195:267,.:9689,.:7023:195,267	1/1:-866.972,-98.1358,0,.,.,.:321:0:320,.:11107,.:0	1/1:-1781.75,-183.026,0,.,.,.:606:0:604,.:21410,.:0	0/1:-475.816,0,-385.333,.,.,.:357:158:198,.:7283,.:5783	0/1:-342.581,0,-215.009,.,.,.:225:91:134,.:4817,.:3232	0/1:-572.368,0,-412.762,.,.,.:402:168:230,.:8267,.:6161	.	1/1:-1324.36,-134.259,0,.,.,.:442:0:441,.:16121,.:0	1/1:-850.966,-86.3956,0,.,.,.:283:0:283,.:10380,.:0	1/1:-1518.93,-154.87,0,.,.,.:523:1:518,.:18613,.:36
+chr12	2791205	.	A	G	11147.39	.	AB=0;ABP=0;AC=74;AF=1;AN=74;AO=413;CIGAR=1X;DP=14427;DPB=413;DPRA=0;EPP=3.26793;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=38.1622;MQMR=0;NS=1;NUMALT=1;ODDS=577.145;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=15244;QR=0;RO=0;RPL=231;RPP=15.6343;RPPR=0;RPR=182;RUN=1;SAF=208;SAP=3.05762;SAR=205;SF=0,1,2,3,4,5,6,7,8,9,10,11,12,13,14,15,16,17,18,19,20,21,22,23,24,25,26,27,28,29,30,31,32,33,34,35,36;SRF=0;SRP=0;SRR=0;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	1/1:-1223.72,-124.325,0:413:0:413:15244:0:0,413	1/1:-472.345,-48.1648,0:160:0:160:5956:0	1/1:-1168.11,-123.723,0:411:0:411:14957:0	1/1:-1296.74,-131.508,0:449:1:448:16461:38:1,448	1/1:-1378.19,-143.591,0:478:0:477:17573:0	1/1:-1372.26,-148.408,0:496:0:493:18028:0:0,493	1/1:-999.89,-103.253,0:343:0:343:12698:0:0,343	1/1:-1491.56,-154.428,0:513:0:513:18986:0	1/1:-986.798,-103.726,0:350:1:348:12809:15	1/1:-1032.2,-108.07,0:360:0:359:13266:0:0,359	1/1:-1298.06,-130.256,0:439:1:436:16163:15:1,436	1/1:-1370.25,-138.173,0:459:0:459:16535:0	1/1:-1658.12,-173.995,0:578:0:578:21390:0:0,578	1/1:-1347.67,-140.28,0:467:0:466:16927:0	1/1:-1068.34,-109.575,0:365:0:364:13506:0	1/1:-1422.42,-153.525,0:512:0:510:18751:0	1/1:-1337.97,-142.688,0:476:0:474:17524:0:0,474	1/1:-1538.87,-157.138,0:523:0:522:19282:0	1/1:-770.961,-80.337,0:273:1:270:9844:14	1/1:-1171.35,-123.422,0:410:0:410:15092:0	1/1:-1399.19,-144.795,0:481:0:481:17854:0:0,481	1/1:-377.689,-40.338,0:134:0:134:4920:0:0,134	1/1:-554.507,-55.6906,0:185:0:185:6801:0	1/1:-1389.43,-141.861,0:485:2:483:17922:71	1/1:-578.194,-59.6039,0:199:0:198:7328:0:0,198	1/1:-1579.3,-162.556,0:541:0:540:19692:0:0,540	1/1:-1296.24,-138.474,0:460:0:460:16252:0	1/1:-1250.57,-126.734,0:423:0:421:15400:0:0,421	1/1:-813.784,-94.2224,0:314:0:313:11115:0	1/1:-1554.75,-160.148,0:534:0:532:19250:0	1/1:-779.733,-80.676,0:269:0:268:9840:0	1/1:-581.932,-59.6039,0:199:0:198:7052:0	1/1:-1100.12,-109.876,0:366:0:365:13596:0	1/1:-1021.54,-102.388,0:345:1:344:12686:15	1/1:-972.429,-100.544,0:334:0:334:12363:0	1/1:-664.944,-69.5379,0:231:0:231:8554:0	1/1:-1266.78,-136.066,0:452:0:452:16359:0
+chr12	2794977	.	G	A	533.43	.	AB=0.50104;ABP=3.01481;AC=1;AF=0.5;AN=2;AO=241;CIGAR=1X;DP=481;DPB=481;DPRA=0;EPP=10.5879;EPPR=11.1533;GTI=0;LEN=1;MEANALT=1;MQM=9.64315;MQMR=25.9042;NS=1;NUMALT=1;ODDS=122.827;PAIRED=1;PAIREDR=0.995833;PAO=0;PQA=0;PQR=0;PRO=0;QA=8678;QR=8886;RO=240;RPL=112;RPP=5.61426;RPPR=14.7363;RPR=129;RUN=1;SAF=118;SAP=3.23556;SAR=123;SF=11;SRF=111;SRP=5.94179;SRR=129;TYPE=snp	GT:GL:DP:RO:AO:QA:QR	.	.	.	.	.	.	.	.	.	.	.	0/1:-61.69,0,-401.717:481:240:241:8678:8886	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr12	5153694	.	C	T	1275.75	.	AB=0.53271;ABP=4.00471;AC=1;AF=0.5;AN=2;AO=57;CIGAR=1X;DP=107;DPB=107;DPRA=0;EPP=26.8203;EPPR=3.18402;GTI=0;LEN=1;MEANALT=1;MQM=40.8246;MQMR=41.92;NS=1;NUMALT=1;ODDS=282.754;PAIRED=0.982456;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2057;QR=1871;RO=50;RPL=12;RPP=44.4969;RPPR=9.26414;RPR=45;RUN=1;SAF=41;SAP=26.8203;SAR=16;SF=4;SRF=31;SRP=9.26414;SRR=19;TYPE=snp	GT:GL:DP:RO:AO:QA:QR	.	.	.	.	0/1:-142.889,0,-130.115:107:50:57:2057:1871	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr12	5154462	.	T	C	6469.80	.	AB=0;ABP=0;AC=74;AF=1;AN=74;AO=228;CIGAR=1X;DP=8947;DPB=238;DPRA=0;EPP=15.3534;EPPR=3.73412;GTI=0;LEN=1;MEANALT=2;MQM=38.5175;MQMR=1;NS=1;NUMALT=1;ODDS=313.829;PAIRED=0.947368;PAIREDR=0.666667;PAO=0;PQA=0;PQR=0;PRO=0;QA=8002;QR=96;RO=3;RPL=152;RPP=58.0209;RPPR=9.52472;RPR=76;RUN=1;SAF=114;SAP=3.0103;SAR=114;SF=0,1,2,3,4,5,6,7,8,9,10,11,12,13,14,15,16,17,18,19,20,21,22,23,24,25,26,27,28,29,30,31,32,33,34,35,36;SRF=2;SRP=3.73412;SRR=1;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	1/1:-655.864,-69.3083,0:238:3:228:8002:96:3,228	1/1:-252.053,-26.7917,0:89:0:89:3170:0	1/1:-665.903,-70.3373,0:252:3:236:8122:82	1/1:-743.89,-74.0534,0:259:0:246:8880:0:0,246	1/1:-839.751,-90.1903,0:313:5:296:10480:167	1/1:-773.193,-80.9771,0:279:0:269:9566:0:0,269	1/1:-528.59,-53.8844,0:187:0:179:6415:0:0,179	1/1:-958.403,-103.064,0:364:3:344:12060:82	1/1:-467.887,-48.5313,0:169:3:159:5719:107	1/1:-622.959,-64.4204,0:217:0:214:7579:0:0,214	1/1:-728.295,-76.1512,0:264:4:250:8994:126:4,250	1/1:-790.117,-84.5049,0:297:1:280:9666:33	1/1:-937.878,-99.6409,0:345:0:331:11591:0:0,331	1/1:-709.348,-76.5975,0:270:2:253:8870:67	1/1:-499.568,-50.272,0:171:0:167:5949:0	1/1:-783.026,-82.9172,0:292:2:274:9610:65	1/1:-617.785,-63.4354,0:222:1:210:7612:33:1,210	1/1:-871.246,-89.7561,0:319:3:296:10675:104	1/1:-623.788,-63.8184,0:216:0:212:7559:0	1/1:-632.518,-64.4204,0:217:0:214:7664:0	1/1:-833.712,-85.4839,0:292:4:281:10210:139:4,281	1/1:-327.397,-33.7154,0:114:0:112:3918:0:0,112	1/1:-332.644,-36.7257,0:126:0:122:4096:0	1/1:-778.201,-79.0245,0:278:1:265:9413:12	1/1:-422.718,-43.2897,0:148:1:143:5116:33:1,143	1/1:-1101.04,-114.386,0:399:3:381:13581:78:3,381	1/1:-749.099,-81.2781,0:277:0:270:9131:0	1/1:-869.707,-92.1922,0:325:2:309:10916:47:2,309	1/1:-585.366,-63.6226,0:214:6:207:7261:171	1/1:-1006.23,-108.633,0:376:3:362:12541:65	1/1:-635.126,-65.3235,0:222:0:217:7641:0	1/1:-464.827,-48.7669,0:168:0:162:5629:0	1/1:-635.566,-67.2791,0:229:2:222:7701:67	1/1:-562.581,-59.6576,0:207:3:196:7035:82	1/1:-574.918,-57.3756,0:219:4:201:7141:134	1/1:-388.39,-39.963,0:139:1:132:4674:16	1/1:-651.412,-69.0944,0:234:2:228:7974:61
+chr12	21926288	.	G	C	7135.56	.	AB=0.492091;ABP=3.31942;AC=1;AF=0.5;AN=2;AO=280;CIGAR=1X;DP=569;DPB=569;DPRA=0;EPP=7.47733;EPPR=3.01781;GTI=0;LEN=1;MEANALT=1;MQM=41.6679;MQMR=41.9792;NS=1;NUMALT=1;ODDS=1643.02;PAIRED=1;PAIREDR=0.99654;PAO=0;PQA=0;PQR=0;PRO=0;QA=10390;QR=10601;RO=289;RPL=125;RPP=9.99003;RPPR=24.1164;RPR=155;RUN=1;SAF=169;SAP=29.099;SAR=111;SF=5;SRF=175;SRP=30.9689;SRR=114;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	0/1:-724.79,0,-747.605:569:289:280:10390:10601:289,280	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr12	21958998	.	CAAAAAAAAAAAAGTGT	CAAAAAAAAAAAGTGT	17.99	.	AB=0.121212;ABP=85.263;AC=1;AF=0.5;AN=2;AO=8;CIGAR=1M1D15M;DP=66;DPB=63.8824;DPRA=0;EPP=4.09604;EPPR=26.3669;GTI=0;LEN=1;MEANALT=9;MQM=42;MQMR=41.0732;NS=1;NUMALT=1;ODDS=4.12746;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=299;QR=1398;RO=41;RPL=2;RPP=7.35324;RPPR=3.48696;RPR=6;RUN=1;SAF=5;SAP=4.09604;SAR=3;SF=24;SRF=17;SRP=5.60547;SRR=24;TYPE=del	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-11.2158,0,-105.83:66:41:8:299:1398:41,8	.	.	.	.	.	.	.	.	.	.	.	.
+chr12	21965027	.	A	C	1896.45	.	AB=0.637168;ABP=21.4774;AC=1;AF=0.5;AN=2;AO=72;CIGAR=1X;DP=113;DPB=113;DPRA=0;EPP=23.398;EPPR=7.30028;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=42;NS=1;NUMALT=1;ODDS=214.409;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2722;QR=1579;RO=41;RPL=33;RPP=4.09604;RPPR=3.06326;RPR=39;RUN=1;SAF=48;SAP=20.3821;SAR=24;SF=14;SRF=28;SRP=14.9269;SRR=13;TYPE=snp	GT:GL:DP:RO:AO:QA:QR	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-201.617,0,-102.433:113:41:72:2722:1579	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr12	21995312	.	C	T	4771.55	.	AB=0.524217;ABP=4.79821;AC=1;AF=0.5;AN=2;AO=184;CIGAR=1X;DP=351;DPB=351;DPRA=0;EPP=4.70971;EPPR=3.12874;GTI=0;LEN=1;MEANALT=2;MQM=42;MQMR=41.5515;NS=1;NUMALT=1;ODDS=953.249;PAIRED=0.994565;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=6858;QR=6111;RO=165;RPL=116;RPP=30.2009;RPPR=4.60271;RPR=68;RUN=1;SAF=96;SAP=3.76559;SAR=88;SF=12;SRF=80;SRP=3.33931;SRR=85;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-487.421,0,-421.41:351:165:184:6858:6111:165,184	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr12	21995409	.	T	G	2540.53	.	AB=0.474886;ABP=4.21006;AC=1;AF=0.5;AN=2;AO=104;CIGAR=1X;DP=219;DPB=219;DPRA=0;EPP=73.2491;EPPR=85.9834;GTI=0;LEN=1;MEANALT=2;MQM=41.9231;MQMR=41.8421;NS=1;NUMALT=1;ODDS=584.978;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3889;QR=4202;RO=114;RPL=67;RPP=21.8019;RPPR=10.6295;RPR=37;RUN=1;SAF=46;SAP=6.01695;SAR=58;SF=25;SRF=49;SRP=7.88659;SRR=65;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-270.291,0,-297.477:219:114:104:3889:4202:114,104	.	.	.	.	.	.	.	.	.	.	.
+chr12	22005167	.	C	T	1346.92	.	AB=0.54717;ABP=5.05886;AC=1;AF=0.5;AN=2;AO=58;CIGAR=1X;DP=106;DPB=106;DPRA=0;EPP=5.40641;EPPR=21.1059;GTI=0;LEN=1;MEANALT=1;MQM=41.9655;MQMR=41.9583;NS=1;NUMALT=1;ODDS=243.656;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1997;QR=1683;RO=48;RPL=28;RPP=3.16006;RPPR=3.19126;RPR=30;RUN=1;SAF=37;SAP=12.5947;SAR=21;SF=26;SRF=31;SRP=11.8771;SRR=17;TYPE=snp	GT:GL:DP:RO:AO:QA:QR	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-142.157,0,-114.68:106:48:58:1997:1683	.	.	.	.	.	.	.	.	.	.
+chr12	22016003	.	AGAAAAAAAAAAACACCAGG	AGAAAAAAAAAACACCAGG	368.38	.	AB=0.555556;ABP=3.9754;AC=1;AF=0.5;AN=2;AO=20;CIGAR=2M1D17M;DP=36;DPB=34.95;DPRA=0;EPP=18.6449;EPPR=3.17734;GTI=0;LEN=1;MEANALT=4;MQM=42;MQMR=42;NS=1;NUMALT=1;ODDS=54.668;PAIRED=1;PAIREDR=0.923077;PAO=0;PQA=0;PQR=0;PRO=0;QA=671;QR=460;RO=13;RPL=19;RPP=38.1882;RPPR=11.1951;RPR=1;RUN=1;SAF=5;SAP=13.8677;SAR=15;SF=0;SRF=3;SRP=11.1951;SRR=10;TYPE=del	GT:GL:DP:RO:AO:QA:QR:AD	0/1:-48.899,0,-30.5106:36:13:20:671:460:13,20	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr12	22016004	.	GAAAAAAAAAAACACCAGG	GAAAAAAAAAACACCAGG	670.95	.	AB=0;ABP=0;AC=23;AF=1;AN=36;AO=32;CIGAR=1M1D11M;DP=896;DPB=32.4615;DPRA=0;EPP=12.7819;EPPR=5.18177;GTI=0;LEN=1;MEANALT=2;MQM=41.9375;MQMR=42;NS=1;NUMALT=1;ODDS=45.0231;PAIRED=1;PAIREDR=1;PAO=1;PQA=36.5;PQR=36.5;PRO=1;QA=1082;QR=33;RO=1;RPL=28;RPP=42.0968;RPPR=5.18177;RPR=4;RUN=1;SAF=8;SAP=20.3821;SAR=24;SF=2,4,5,7,8,9,15,16,17,19,20,21,23,25,28,30,31,32;SRF=0;SRP=5.18177;SRR=1;TYPE=del	GT:GL:DP:RO:AO:QA:QR:AD	.	.	1/1:.,.,0:34:1:32:1082:33	.	0/1:.,.,-33.9872:40:14:21:729:509	0/1:-27.759,0,-57.0827:42:22:13:438:773:22,13	.	0/1:.,.,-55.9643:55:23:31:1060:851	0/1:.,.,-51.149:44:20:23:772:738	0/1:-46.2432,0,-39.5377:37:16:19:648:572:16,19	.	.	.	.	.	0/1:.,.,-78.502:58:31:24:768:1137	0/1:-56.7804,0,-65.5304:50:25:25:823:922:25,25	0/1:.,.,-43.1509:41:17:21:699:625	.	1/1:.,.,0:49:2:46:1545:76	0/1:-69.0235,0,-69.309:59:27:29:992:998:27,29	0/1:-46.4452,0,-49.8355:47:20:22:672:714:20,22	.	0/1:.,.,-58.751:53:23:28:966:850	.	1/1:-270.679,-26.4849,0:100:1:96:3134:38:1,96	.	.	1/1:.,.,0:46:0:45:1397:0	.	0/1:.,.,-48.0302:55:20:30:989:729	0/1:.,.,-46.8206:44:19:24:771:674	1/1:.,.,0:42:0:41:1246:0	.	.	.	.
+chr12	22017410	.	C	T	824.95	.	AB=0.464789;ABP=3.7749;AC=2;AF=0.5;AN=4;AO=33;CIGAR=1X;DP=149;DPB=71;DPRA=0;EPP=3.60252;EPPR=3.23888;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=42;NS=1;NUMALT=1;ODDS=181.31;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1241;QR=1440;RO=38;RPL=24;RPP=17.8158;RPPR=5.06748;RPR=9;RUN=1;SAF=15;SAP=3.60252;SAR=18;SF=3,30;SRF=18;SRP=3.23888;SRR=20;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	0/1:-86.0266,0,-103.176:71:38:33:1241:1440:38,33	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-92.8848,0,-114.606:78:43:35:1346:1590	.	.	.	.	.	.
+chr12	22017422	.	A	G	2167.70	.	AB=0;ABP=0;AC=74;AF=1;AN=74;AO=58;CIGAR=1X;DP=2556;DPB=59;DPRA=0;EPP=6.75422;EPPR=0;GTI=0;LEN=1;MEANALT=2;MQM=41.6897;MQMR=0;NS=1;NUMALT=1;ODDS=85.0102;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=2186;QR=0;RO=0;RPL=40;RPP=21.1309;RPPR=0;RPR=18;RUN=1;SAF=26;SAP=4.35811;SAR=32;SF=0,1,2,3,4,5,6,7,8,9,10,11,12,13,14,15,16,17,18,19,20,21,22,23,24,25,26,27,28,29,30,31,32,33,34,35,36;SRF=0;SRP=0;SRR=0;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	1/1:-187.643,-17.4597,0:59:0:58:2186:0:0,58	1/1:-96.4711,-8.72987,0:29:0:29:1115:0	1/1:-161.57,-15.0515,0:50:0:50:1868:0	1/1:-224.198,-20.47,0:68:0:68:2596:0:0,68	1/1:-206.355,-18.9649,0:63:0:63:2401:0	1/1:-167.321,-15.6536,0:52:0:52:1936:0:0,52	1/1:-223.324,-20.7711,0:69:0:69:2582:0:0,69	1/1:-253.828,-23.7814,0:79:0:79:2939:0	1/1:-126.7,-12.0412,0:40:0:40:1473:0	1/1:-115.863,-10.5361,0:35:0:35:1338:0:0,35	1/1:-170.087,-15.3525,0:51:0:51:1971:0:0,51	1/1:-358.821,-34.6185,0:115:0:115:4169:0	1/1:-369.571,-34.0164,0:113:0:113:4278:0:0,113	1/1:-327.069,-29.802,0:99:0:99:3786:0	1/1:-161.555,-15.0515,0:50:0:50:1868:0	1/1:-301.857,-28.8989,0:97:0:96:3545:0	1/1:-295.323,-26.7917,0:89:0:89:3428:0:0,89	1/1:-249.788,-23.1793,0:77:0:77:2890:0	1/1:-149.193,-13.5464,0:45:0:45:1726:0	1/1:-211.281,-19.567,0:65:0:65:2444:0	1/1:-245.814,-22.5773,0:75:0:75:2846:0:0,75	1/1:-226.029,-22.2762,0:74:0:74:2603:0:0,74	1/1:-227.254,-21.9752,0:73:0:73:2619:0	1/1:-267.671,-24.3834,0:81:0:81:3104:0	1/1:-109.794,-9.93399,0:33:0:33:1269:0:0,33	1/1:-376.923,-35.5215,0:118:0:118:4360:0:0,118	1/1:-288.253,-28.5979,0:96:0:95:3326:0	1/1:-296.714,-27.9958,0:93:0:93:3424:0:0,93	1/1:-206.987,-19.2659,0:64:0:64:2390:0	1/1:-337.279,-33.1133,0:110:0:110:3897:0	1/1:-230.511,-21.3731,0:71:0:71:2666:0	1/1:-255.876,-23.7814,0:79:0:79:2956:0	1/1:-186.177,-17.1587,0:57:0:57:2163:0	1/1:-177.234,-16.5567,0:56:0:55:2048:0	1/1:-183.917,-16.8577,0:56:0:56:2126:0	1/1:-100.19,-9.0309,0:30:0:30:1159:0	1/1:-146.818,-13.5464,0:45:0:45:1708:0
+chr12	22017486	.	C	G	1020.00	.	AB=0;ABP=0;AC=74;AF=1;AN=74;AO=26;CIGAR=1X;DP=1282;DPB=26;DPRA=0;EPP=3.0103;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=41.3077;MQMR=0;NS=1;NUMALT=1;ODDS=40.6488;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=949;QR=0;RO=0;RPL=20;RPP=19.3799;RPPR=0;RPR=6;RUN=1;SAF=7;SAP=15.0369;SAR=19;SF=0,1,2,3,4,5,6,7,8,9,10,11,12,13,14,15,16,17,18,19,20,21,22,23,24,25,26,27,28,29,30,31,32,33,34,35,36;SRF=0;SRP=0;SRR=0;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	1/1:-81.5382,-7.82678,0:26:0:26:949:0:0,26	1/1:-59.0537,-5.41854,0:18:0:18:678:0	1/1:-78.9104,-7.82678,0:26:0:26:905:0	1/1:-91.8927,-8.72987,0:29:0:29:1057:0:0,29	1/1:-102.254,-9.63296,0:32:0:32:1191:0	1/1:-96.356,-9.33193,0:31:0:31:1110:0:0,31	1/1:-98.4347,-9.0309,0:30:0:30:1133:0:0,30	1/1:-127.14,-12.3422,0:41:0:41:1463:0	1/1:-87.5484,-8.12781,0:27:0:27:1009:0	1/1:-65.3787,-6.0206,0:20:0:20:751:0:0,20	1/1:-79.8581,-7.52575,0:25:0:25:917:0:0,25	1/1:-186.546,-18.0618,0:61:0:60:2175:0	1/1:-184.584,-17.1587,0:57:0:57:2133:0:0,57	1/1:-137.6,-13.2453,0:44:0:44:1585:0	1/1:-78.9697,-7.22472,0:24:0:24:909:0	1/1:-145.993,-13.8474,0:46:0:46:1679:0	1/1:-153.546,-14.4494,0:48:0:48:1768:0:0,48	1/1:-114.49,-10.8371,0:36:0:36:1325:0	1/1:-86.367,-8.42884,0:28:0:28:991:0	1/1:-95.7292,-9.0309,0:30:0:30:1100:0	1/1:-127.944,-12.0412,0:40:0:40:1473:0:0,40	1/1:-100.756,-9.93399,0:33:0:33:1153:0:0,33	1/1:-135.61,-12.9443,0:43:0:43:1559:0	1/1:-108.098,-9.93399,0:33:0:33:1245:0	1/1:-52.2906,-4.81648,0:16:0:16:600:0:0,16	1/1:-161.066,-15.3525,0:51:0:51:1854:0:0,51	1/1:-175.641,-17.7608,0:59:0:59:2028:0	1/1:-158.949,-14.7505,0:49:0:49:1834:0:0,49	1/1:-102.708,-9.63296,0:32:0:32:1182:0	1/1:-185.096,-17.7608,0:59:0:59:2130:0	1/1:-122.169,-11.1381,0:38:0:37:1413:0	1/1:-98.0529,-9.33193,0:31:0:31:1127:0	1/1:-96.8408,-9.0309,0:30:0:30:1115:0	1/1:-71.029,-7.22472,0:24:0:24:811:0	1/1:-88.03,-8.12781,0:27:0:27:1012:0	1/1:-46.8464,-4.21442,0:14:0:14:539:0	1/1:-73.7364,-7.22472,0:24:0:24:855:0
+chr12	22059054	.	A	G	372.41	.	AB=0.486486;ABP=3.06899;AC=1;AF=0.5;AN=2;AO=18;CIGAR=1X;DP=37;DPB=37;DPRA=0;EPP=3.49285;EPPR=3.12459;GTI=0;LEN=1;MEANALT=1;MQM=40.9444;MQMR=42;NS=1;NUMALT=1;ODDS=85.7514;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=632;QR=707;RO=19;RPL=4;RPP=15.074;RPPR=16.8392;RPR=14;RUN=1;SAF=12;SAP=7.35324;SAR=6;SF=5;SRF=14;SRP=12.2676;SRR=5;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	0/1:-43.9923,0,-50.5463:37:19:18:632:707:19,18	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr12	22061007	.	T	G	796.20	.	AB=0.432099;ABP=6.2541;AC=1;AF=0.5;AN=2;AO=35;CIGAR=1X;DP=81;DPB=81;DPRA=0;EPP=16.9698;EPPR=9.80795;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=42;NS=1;NUMALT=1;ODDS=183.332;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1312;QR=1772;RO=46;RPL=8;RPP=25.4075;RPPR=15.095;RPR=27;RUN=1;SAF=14;SAP=6.05036;SAR=21;SF=17;SRF=22;SRP=3.19912;SRR=24;TYPE=snp	GT:GL:DP:RO:AO:QA:QR	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-89.6024,0,-128.66:81:46:35:1312:1772	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr12	22063115	.	A	G	4173.59	.	AB=0;ABP=0;AC=74;AF=1;AN=74;AO=89;CIGAR=1X;DP=4988;DPB=89;DPRA=0;EPP=3.0347;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=41.9775;MQMR=0;NS=1;NUMALT=1;ODDS=127.985;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=3336;QR=0;RO=0;RPL=37;RPP=8.49998;RPPR=0;RPR=52;RUN=1;SAF=46;SAP=3.22989;SAR=43;SF=0,1,2,3,4,5,6,7,8,9,10,11,12,13,14,15,16,17,18,19,20,21,22,23,24,25,26,27,28,29,30,31,32,33,34,35,36;SRF=0;SRP=0;SRR=0;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	1/1:-288.914,-26.7917,0:89:0:89:3336:0:0,89	1/1:-227.802,-21.0721,0:70:0:70:2630:0	1/1:-436.686,-39.9432,0:138:1:137:5064:16	1/1:-416.029,-39.4349,0:131:0:131:4834:0:0,131	1/1:-401.263,-37.6288,0:125:0:125:4648:0	1/1:-410.08,-37.8366,0:131:1:130:4769:16:1,130	1/1:-287.844,-26.7917,0:89:0:89:3327:0:0,89	1/1:-521.257,-47.7721,0:165:1:164:6045:19	1/1:-390.799,-37.9298,0:128:0:126:4546:0	1/1:-260.743,-24.9855,0:83:0:83:3003:0:0,83	1/1:-390.004,-35.328,0:123:1:122:4547:17:1,122	1/1:-535.874,-51.0813,0:175:1:174:6227:16	1/1:-724.193,-67.7318,0:226:0:225:8399:0:0,225	1/1:-635.474,-61.1091,0:204:0:203:7361:0	1/1:-273.644,-25.8886,0:86:0:86:3160:0	1/1:-496.071,-47.2617,0:157:0:157:5745:0	1/1:-503.353,-46.6384,0:162:1:160:5845:20:1,160	1/1:-498.755,-46.9607,0:157:0:156:5796:0	1/1:-270.369,-26.1896,0:88:0:87:3120:0	1/1:-363.052,-34.6185,0:115:0:115:4204:0	1/1:-562.745,-53.2823,0:177:0:177:6549:0:0,177	1/1:-247.589,-23.7814,0:80:0:79:2850:0:0,79	1/1:-336.238,-32.5112,0:109:0:108:3870:0	1/1:-484.117,-46.6597,0:155:0:155:5592:0	1/1:-283.514,-26.4906,0:88:0:88:3274:0:0,88	1/1:-601.071,-58.0988,0:193:0:193:6982:0:0,193	1/1:-521.769,-50.8741,0:170:0:169:6043:0	1/1:-591.803,-56.5936,0:188:0:188:6932:0:0,188	1/1:-351.06,-33.1133,0:110:0:110:4060:0	1/1:-722.926,-69.839,0:234:0:232:8403:0	1/1:-387.649,-37.0267,0:123:0:123:4484:0	1/1:-369.902,-36.4246,0:121:0:121:4297:0	1/1:-359.678,-35.2205,0:117:0:117:4159:0	1/1:-403.87,-38.2308,0:127:0:127:4689:0	1/1:-389.019,-36.7257,0:123:0:122:4512:0	1/1:-185.376,-18.0618,0:60:0:60:2136:0	1/1:-538.232,-51.4761,0:171:0:171:6214:0
+chr12	22063251	.	CAAAAAAAAAAAAAAGAGTAC	CAAAAAAAAAAAAAGAGTAC,CAAAAAAAAAAAAAAAGAGTAC	311.71	.	AB=0.541667;ABP=3.73412;AC=23,1;AF=0.5;AN=44;AO=26;CIGAR=1M1D19M;DP=1032;DPB=45.9048;DPRA=0;EPP=8.35546;EPPR=3.0103;GTI=0;LEN=1;MEANALT=14;MQM=41.1923;MQMR=42;NS=1;NUMALT=1;ODDS=12.7432;PAIRED=1;PAIREDR=1;PAO=0.333333;PQA=4.66667;PQR=4.66667;PRO=0.333333;QA=857;QR=150;RO=4;RPL=19;RPP=15.0369;RPPR=3.0103;RPR=7;RUN=1;SAF=10;SAP=6.01695;SAR=16;SF=3,7,9,10,11,12,13,14,16,17,18,19,20,21,22,24,26,27,29,30,33,36;SRF=0;SRP=11.6962;SRR=4;TYPE=del	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	0/1:-65.0963,0,-3.11484,.,.,.:48:4:26,.:857,.:150:4,26	.	.	.	0/1:.,.,-7.54623,.,.,.:46:8:26,.:831,.:285	.	0/1:-20.8792,0,-27.9776,.,.,.:30:11:10,.:309,.:391:11,10	0/1:-31.5172,0,-41.0515,.,.,.:52:16:13,.:459,.:583:16,13	0/1:.,.,-15.5131,.,.,.:57:11:26,.:757,.:399	0/1:-51.6369,0,-14.8002,.,.,.:63:12:25,.:854,.:431:12,25	0/1:.,.,-59.36,.,.,.:76:30:30,.:841,.:1034	1/1:.,.,0,.,.,.:18:0:15,.:355,.:0	.	0/1:-33.667,0,-42.0877,.,.,.:49:17:16,.:497,.:591:17,16	0/1:.,.,-18.9216,.,.,.:42:12:23,.:744,.:431	0/1:.,.,-16.4015,.,.,.:27:10:10,.:339,.:325	0/2:.,.,.,.,.,-21.8994:47:13:.,15:.,407:464	0/1:-30.2816,0,-18.499,.,.,.:39:8:14,.:423,.:287:8,14	0/1:-13.5305,0,-13.4496,.,.,.:32:9:12,.:319,.:321:9,12	0/1:.,.,-18.6361,.,.,.:51:13:21,.:562,.:465	.	0/1:-19.5762,0,-4.50706,.,.,.:25:3:12,.:276,.:102:3,12	.	0/1:.,.,-31.6209,.,.,.:65:18:33,.:1017,.:612	0/1:-30.303,0,-64.5421,.,.,.:74:26:16,.:503,.:906:26,16	.	0/1:.,.,-39.4965,.,.,.:79:21:41,.:1258,.:743	0/1:.,.,-16.3976,.,.,.:36:10:16,.:476,.:355	.	.	0/1:.,.,-26.5767,.,.,.:33:12:12,.:345,.:428	.	.	1/1:.,.,0,.,.,.:43:6:27,.:839,.:211
+chr12	22063749	.	T	C	1458.09	.	AB=0;ABP=0;AC=74;AF=1;AN=74;AO=48;CIGAR=1X;DP=1876;DPB=49;DPRA=0;EPP=11.8771;EPPR=0;GTI=0;LEN=1;MEANALT=2;MQM=41.5625;MQMR=0;NS=1;NUMALT=1;ODDS=71.1473;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1762;QR=0;RO=0;RPL=12;RPP=29.068;RPPR=0;RPR=36;RUN=1;SAF=33;SAP=17.6677;SAR=15;SF=0,1,2,3,4,5,6,7,8,9,10,11,12,13,14,15,16,17,18,19,20,21,22,23,24,25,26,27,28,29,30,31,32,33,34,35,36;SRF=0;SRP=0;SRR=0;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	1/1:-152.679,-14.4494,0:49:0:48:1762:0:0,48	1/1:-47.0681,-4.51545,0:15:0:15:538:0	1/1:-150.579,-14.7505,0:49:0:49:1731:0	1/1:-162.993,-15.6536,0:52:0:52:1878:0:0,52	1/1:-125.026,-11.7402,0:39:0:39:1443:0	1/1:-135.913,-13.2453,0:44:0:44:1579:0:0,44	1/1:-105.226,-10.5361,0:35:0:35:1233:0:0,35	1/1:-218.374,-20.7711,0:70:0:69:2539:0	1/1:-83.183,-7.82678,0:26:0:26:957:0	1/1:-121.149,-11.4391,0:38:0:38:1408:0:0,38	1/1:-153.672,-14.4494,0:48:0:48:1781:0:0,48	1/1:-191.625,-18.3628,0:61:0:61:2216:0	1/1:-258.686,-24.0824,0:80:0:80:2999:0:0,80	1/1:-195.858,-19.2659,0:64:0:64:2263:0	1/1:-119.806,-11.4391,0:38:0:38:1377:0	1/1:-203.325,-19.567,0:65:0:65:2342:0	1/1:-152.465,-14.1484,0:47:0:47:1759:0:0,47	1/1:-184.62,-17.1587,0:58:0:57:2136:0	1/1:-116.662,-11.1381,0:37:0:37:1342:0	1/1:-127.805,-12.0412,0:40:0:40:1468:0	1/1:-191.3,-18.6639,0:62:0:62:2197:0:0,62	1/1:-101.656,-9.63296,0:32:0:32:1168:0:0,32	1/1:-134.835,-13.2453,0:44:0:44:1548:0	1/1:-172.251,-16.8577,0:56:0:56:1981:0	1/1:-95.9927,-9.0309,0:30:0:30:1104:0:0,30	1/1:-269.19,-23.8323,0:87:2:84:3133:30:2,84	1/1:-271.06,-26.1896,0:87:0:87:3135:0	1/1:-282.412,-27.0927,0:92:0:90:3257:0:0,90	1/1:-145.847,-14.4494,0:48:0:48:1684:0	1/1:-233.089,-22.5773,0:76:0:75:2685:0	1/1:-154.072,-15.3525,0:51:0:51:1786:0	1/1:-130.424,-12.9443,0:43:0:43:1494:0	1/1:-119.827,-11.1381,0:37:0:37:1383:0	1/1:-138.514,-13.5464,0:45:0:45:1591:0	1/1:-142.309,-13.2453,0:45:0:44:1645:0	1/1:-77.752,-7.22472,0:24:0:24:893:0	1/1:-195.564,-18.6639,0:62:0:62:2248:0
+chr12	22066006	.	GAAAAAAAAAAGAAAAAAAAAACAGATGT	GAAAAAAAAAGAAAAAAAAAACAGATGT	945.08	.	AB=0.4125;ABP=8.33041;AC=3;AF=0.5;AN=6;AO=33;CIGAR=1M1D27M;DP=297;DPB=78.6897;DPRA=0;EPP=10.9724;EPPR=5.18177;GTI=0;LEN=1;MEANALT=10;MQM=42;MQMR=41.5;NS=1;NUMALT=1;ODDS=156.52;PAIRED=1;PAIREDR=1;PAO=0.5;PQA=19.5;PQR=19.5;PRO=0.5;QA=1116;QR=1320;RO=36;RPL=15;RPP=3.60252;RPPR=3.9754;RPR=18;RUN=1;SAF=24;SAP=17.8158;SAR=9;SF=9,20,33;SRF=13;SRP=9.04217;SRR=23;TYPE=del	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	0/1:-75.936,0,-92.511:80:36:33:1116:1320:36,33	.	.	.	.	.	.	.	.	.	.	0/1:-110.18,0,-133.305:124:51:47:1615:1876:51,47	.	.	.	.	.	.	.	.	.	.	.	.	0/1:.,.,-84.6482:93:36:47:1715:1320	.	.	.
+chr12	22068849	.	G	T	2045.23	.	AB=0;ABP=0;AC=49;AF=1;AN=70;AO=104;CIGAR=1X;DP=3723;DPB=104;DPRA=0;EPP=5.09825;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=41.8269;MQMR=0;NS=1;NUMALT=1;ODDS=148.78;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=3937;QR=0;RO=0;RPL=86;RPP=99.5573;RPPR=0;RPR=18;RUN=1;SAF=45;SAP=7.10269;SAR=59;SF=0,1,2,4,5,6,7,8,9,10,11,12,13,14,15,16,17,18,19,20,21,22,23,24,25,26,27,28,29,30,31,32,33,34,35;SRF=0;SRP=0;SRR=0;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	1/1:-340.151,-31.3071,0:104:0:104:3937:0:0,104	1/1:-163.671,-15.0515,0:50:0:50:1893:0	1/1:-310.032,-29.1999,0:97:0:97:3596:0	.	1/1:-268.655,-24.3834,0:81:0:81:3114:0	1/1:-355.866,-33.4143,0:111:0:111:4121:0:0,111	1/1:-223.476,-20.47,0:68:0:68:2586:0:0,68	0/1:-130.712,0,-139.517:103:53:50:1870:1967	0/1:-155.54,0,-92.8988:93:37:56:2124:1397	0/1:-85.3826,0,-115.932:79:44:35:1273:1612:44,35	0/1:-149.809,0,-76.4992:85:31:54:2037:1177:31,54	0/1:-229.96,0,-169.151:158:69:89:3202:2495	0/1:-223.679,0,-219.877:168:83:85:3173:3159:83,85	0/1:-220.158,0,-206.746:165:80:85:3118:2961	0/1:-76.3291,0,-119.394:74:44:30:1136:1635	1/1:-429.615,-32.7362,0:141:4:137:5101:109	0/1:-156.415,0,-114.412:103:46:57:2183:1688:46,57	0/1:-174.136,0,-169.333:131:64:67:2502:2418	0/1:-97.0833,0,-87.4022:75:37:38:1378:1263	0/1:-139.565,0,-114.048:97:44:52:1952:1655	0/1:-213.157,0,-130.509:129:53:76:2920:1959:53,76	0/1:-103.865,0,-90.5801:78:37:41:1464:1310:37,41	0/1:-120.953,0,-89.6393:83:37:46:1680:1318	1/1:-366.244,-34.3174,0:114:0:114:4271:0	0/1:-89.1875,0,-63.1469:57:25:32:1229:925:25,32	1/1:-645.845,-61.4101,0:204:0:204:7481:0:0,204	0/1:-136.045,0,-184.252:130:72:58:2016:2571	0/1:-200.061,0,-224.384:162:84:77:2874:3159:84,77	1/1:-250.565,-23.7814,0:79:0:79:2894:0	0/1:-237.731,0,-251.402:185:94:91:3386:3562	0/1:-120.978,0,-100.301:86:39:45:1698:1452	1/1:-368.72,-28.6566,0:118:2:116:4344:75	1/1:-266.014,-25.2865,0:84:0:84:3097:0	0/1:-96.2726,0,-125.029:87:47:40:1409:1743	1/1:-279.259,-25.5876,0:85:0:85:3249:0	1/1:-191.132,-17.7608,0:59:0:59:2208:0	.
+chr12	32945486	.	G	T	2147.50	.	AB=0.57732;ABP=8.04722;AC=3;AF=0.5;AN=6;AO=56;CIGAR=1X;DP=561;DPB=97;DPRA=0;EPP=21.778;EPPR=41.6201;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=42;NS=1;NUMALT=1;ODDS=208.394;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=2097;QR=1501;RO=41;RPL=43;RPP=37.909;RPPR=5.60547;RPR=13;RUN=1;SAF=28;SAP=3.0103;SAR=28;SF=1,3,36;SRF=21;SRP=3.06326;SRR=20;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	0/1:-152.546,0,-101.162:97:41:56:2097:1501	.	0/1:-238.823,0,-329.907:218:123:95:3512:4568:123,95	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-289.571,0,-342.274:246:132:114:4195:4804
+chr12	32945495	.	C	T	5085.08	.	AB=0.478632;ABP=3.93828;AC=43;AF=0.5;AN=60;AO=112;CIGAR=1X;DP=7654;DPB=234;DPRA=0;EPP=47.6806;EPPR=46.0988;GTI=0;LEN=1;MEANALT=2;MQM=42;MQMR=41.9835;NS=1;NUMALT=1;ODDS=636.665;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=4179;QR=4349;RO=121;RPL=76;RPP=34.0313;RPPR=24.9942;RPR=36;RUN=1;SAF=48;SAP=7.97367;SAR=64;SF=0,1,2,3,4,5,6,8,10,11,12,13,14,15,17,18,20,24,25,26,27,28,29,30,31,32,33,34,35,36;SRF=56;SRP=4.46393;SRR=65;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	0/1:-291.436,0,-307.455:234:121:112:4179:4349:121,112	0/1:-155.019,0,-95.102:96:39:57:2118:1425	0/1:-341.472,0,-313.628:270:133:136:4900:4554	0/1:-233.65,0,-328.311:216:123:93:3453:4533:123,93	1/1:-801.757,-76.1606,0:256:0:253:9317:0	0/1:-367.907,0,-411.869:304:158:145:5348:5838:158,145	0/1:-237.893,0,-260.408:193:100:93:3420:3666:100,93	.	0/1:-267.201,0,-237.936:196:94:102:3771:3425	.	0/1:-296.882,0,-300.805:233:119:113:4243:4304:119,113	1/1:-1155.67,-109.29,0:376:1:373:13422:38	1/1:-1030.63,-96.6306,0:323:0:321:11984:0:0,321	1/1:-1079.15,-100.734,0:347:1:346:12538:39	1/1:-638.529,-60.206,0:200:0:200:7377:0	0/1:-308.958,0,-340.308:258:133:125:4483:4818	.	0/1:-334.437,0,-341.293:264:135:128:4800:4855	0/1:-171.352,0,-229.124:157:87:70:2511:3185	.	1/1:-936.41,-86.9977,0:289:0:289:10855:0:0,289	.	.	.	1/1:-294.265,-27.9958,0:93:0:93:3394:0:0,93	0/1:-494.5,0,-636.559:450:249:196:7264:8919:249,196	0/1:-406.621,0,-504.961:372:202:168:5979:7086	0/1:-546.612,0,-510.784:416:205:211:7763:7323:205,211	0/1:-246.098,0,-300.752:217:117:100:3598:4221	1/1:-1325.86,-124.494,0:432:2:427:15540:53	1/1:-728.619,-68.3338,0:228:0:227:8423:0	1/1:-676.092,-62.7204,0:213:1:212:7830:14	1/1:-723.164,-68.3338,0:227:0:227:8352:0	1/1:-639.118,-59.6039,0:198:0:198:7386:0	0/1:-340.301,0,-239.59:224:98:126:4707:3548	1/1:-409.339,-38.2308,0:127:0:127:4726:0	0/1:-285.98,0,-340.301:245:131:113:4151:4770
+chr12	32949029	.	ACT	AGCT	3343.41	.	AB=0.516949;ABP=3.30474;AC=8;AF=0.5;AN=14;AO=61;CIGAR=1M1I1M;DP=1790;DPB=149.5;DPRA=0;EPP=4.7546;EPPR=3.19126;GTI=0;LEN=1;MEANALT=2;MQM=41.6721;MQMR=42;NS=1;NUMALT=1;ODDS=256.113;PAIRED=0;PAIREDR=0;PAO=1;PQA=0;PQR=0;PRO=1;QA=2135;QR=1796;RO=48;RPL=23;RPP=11.0198;RPPR=24.906;RPR=38;RUN=1;SAF=38;SAP=11.0198;SAR=23;SF=1,3,7,17,21,34,36;SRF=34;SRP=21.1059;SRR=14;TYPE=ins	GT:GL:DP:RO:AO:QA:QR:AD	.	0/1:.,.,-121.57:118:48:61:2135:1796	.	1/1:-794.76,-75.2728,0:272:1:260:9209:38:1,260	.	.	.	0/1:.,.,-428.676:345:170:165:5974:6199	.	.	.	.	.	.	.	.	.	0/1:.,.,-380.348:305:147:146:5164:5455	.	.	.	0/1:-55.5702,0,-351.488:164:125:36:1196:4613:125,36	.	.	.	.	.	.	.	.	.	.	.	.	0/1:.,.,-370.297:265:142:116:4227:5246	.	0/1:.,.,-407.629:321:156:155:5541:5833
+chr12	32949251	.	AACA	AAA,AAAA	4252.72	.	AB=0.614634,0.239024;ABP=26.4092,124.284;AC=1,1;AF=0.5,0.5;AN=2;AO=126,49;CIGAR=2M1D1M,2M1X1M;DP=205;DPB=160.25;DPRA=0,0;EPP=25.3454,45.5977;EPPR=3.0103;GTI=0;LEN=1,1;MEANALT=4,4;MQM=40.7302,39.0408;MQMR=42;NS=1;NUMALT=2;ODDS=152.343;PAIRED=0.960317,1;PAIREDR=1;PAO=0,0;PQA=0,0;PQR=0;PRO=0;QA=4229,1693;QR=75;RO=2;RPL=55,15;RPP=7.42218,19.0083;RPPR=7.35324;RPR=71,34;RUN=1,1;SAF=62,18;SAP=3.07924,10.4997;SAR=64,31;SF=3;SRF=1;SRP=3.0103;SRR=1;TYPE=del,snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	1/2:-450.675,-124.962,-92.9344,-320.426,0,-311.578:205:2:126,49:4229,1693:75:2,126,49	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr12	32949252	.	ACA	AA	1402.90	.	AB=0.315789;ABP=25.4108;AC=5;AF=0.5;AN=10;AO=24;CIGAR=1M1D1M;DP=1101;DPB=68;DPRA=0;EPP=8.80089;EPPR=39.7082;GTI=0;LEN=1;MEANALT=2;MQM=41.75;MQMR=42;NS=1;NUMALT=1;ODDS=107.15;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=839;QR=1494;RO=40;RPL=10;RPP=4.45795;RPPR=8.43898;RPR=14;RUN=1;SAF=14;SAP=4.45795;SAR=10;SF=1,7,17,34,36;SRF=20;SRP=3.0103;SRR=20;TYPE=del	GT:GL:DP:RO:AO:QA:QR	.	0/1:-53.624,0,-110.236:76:40:24:839:1494	.	.	.	.	.	0/1:-211.152,0,-392.175:273:149:98:3314:5403	.	.	.	.	.	.	.	.	.	0/1:-203.276,0,-323.69:248:121:91:3097:4481	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-136.653,0,-336.574:211:125:68:2358:4516	.	0/1:-165.077,0,-498.995:293:181:85:2815:6692
+chr12	32955330	.	G	A	2833.35	.	AB=0.519824;ABP=3.78514;AC=1;AF=0.5;AN=2;AO=118;CIGAR=1X;DP=227;DPB=227;DPRA=0;EPP=3.08391;EPPR=10.2021;GTI=0;LEN=1;MEANALT=1;MQM=41.8475;MQMR=41.633;NS=1;NUMALT=1;ODDS=547.22;PAIRED=0.991525;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=4306;QR=3804;RO=109;RPL=26;RPP=83.1708;RPPR=127.342;RPR=92;RUN=1;SAF=86;SAP=56.6714;SAR=32;SF=11;SRF=75;SRP=36.4988;SRR=34;TYPE=snp	GT:GL:DP:RO:AO:QA:QR	.	.	.	.	.	.	.	.	.	.	.	0/1:-304.037,0,-262.166:227:109:118:4306:3804	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr12	32974352	.	G	A	2248.19	.	AB=0.471366;ABP=4.62695;AC=1;AF=0.5;AN=2;AO=107;CIGAR=1X;DP=227;DPB=227;DPRA=0;EPP=4.65412;EPPR=3.29983;GTI=0;LEN=1;MEANALT=1;MQM=36.243;MQMR=40;NS=1;NUMALT=1;ODDS=517.665;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3887;QR=4461;RO=120;RPL=40;RPP=17.8047;RPPR=3.66174;RPR=67;RUN=1;SAF=56;SAP=3.51765;SAR=51;SF=14;SRF=61;SRP=3.08268;SRR=59;TYPE=snp	GT:GL:DP:RO:AO:QA:QR	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-233.292,0,-307.543:227:120:107:3887:4461	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr12	32974391	.	CAA	CA	2711.55	.	AB=0.540541;ABP=6.70767;AC=1;AF=0.5;AN=2;AO=140;CIGAR=1M1D1M;DP=259;DPB=217.333;DPRA=0;EPP=6.05036;EPPR=5.21827;GTI=0;LEN=1;MEANALT=1;MQM=35.0143;MQMR=37.4202;NS=1;NUMALT=1;ODDS=599.176;PAIRED=0.985714;PAIREDR=0.991597;PAO=6.5;PQA=215;PQR=215;PRO=6.5;QA=4827;QR=4385;RO=119;RPL=79;RPP=8.03571;RPPR=3.17453;RPR=61;RUN=1;SAF=72;SAP=3.25847;SAR=68;SF=8;SRF=64;SRP=4.48836;SRR=55;TYPE=del	GT:GL:DP:RO:AO:QA:QR	.	.	.	.	.	.	.	.	0/1:-279.172,0,-267.685:259:119:140:4827:4385	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr12	32996137	.	GAA	AAT	32.00	.	AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X1M1X;DP=2;DPB=2;DPRA=0;EPP=3.0103;EPPR=0;GTI=0;LEN=3;MEANALT=1;MQM=42;MQMR=0;NS=1;NUMALT=1;ODDS=7.36761;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=47;QR=0;RO=0;RPL=0;RPP=7.35324;RPPR=0;RPR=2;RUN=1;SAF=1;SAP=3.0103;SAR=1;SF=34;SRF=0;SRP=0;SRR=0;TYPE=complex	GT:GL:DP:RO:AO:QA:QR	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	1/1:-4.40383,-0.60206,0:2:0:2:47:0	.	.
+chr12	33021934	.	A	G	3972.65	.	AB=0.557554;ABP=11.0088;AC=21;AF=0.5;AN=38;AO=155;CIGAR=1X;DP=5424;DPB=278;DPRA=0;EPP=3.36054;EPPR=3.65106;GTI=0;LEN=1;MEANALT=2;MQM=39.329;MQMR=41.6066;NS=1;NUMALT=1;ODDS=697.15;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=5694;QR=4599;RO=122;RPL=113;RPP=73.6322;RPPR=13.2625;RPR=42;RUN=1;SAF=79;SAP=3.13639;SAR=76;SF=0,1,3,9,10,11,12,13,17,20,21,22,24,25,27,30,31,32,33;SRF=59;SRP=3.29508;SRR=63;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	0/1:-385.312,0,-311.482:278:122:155:5694:4599:122,155	0/1:-122.294,0,-184.349:120:68:52:1940:2586	.	1/1:-986.755,-96.3296,0:320:0:320:11768:0:0,320	.	.	.	.	.	0/1:-311.057,0,-274.279:235:109:125:4620:4041:109,125	0/1:-372.863,0,-414.232:312:158:154:5698:5964:158,154	0/1:-505.833,0,-452.869:387:183:204:7388:6605	0/1:-512.536,0,-547.791:430:213:217:7973:7929:213,217	1/1:-1046.56,-95.989,0:350:3:347:12578:103	.	.	.	0/1:-468.544,0,-470.128:370:180:190:6980:6861	.	.	0/1:-365.64,0,-540.051:352:200:152:5644:7607:200,152	0/1:-43.2885,0,-253.662:117:92:25:926:3356:92,25	0/1:-141.773,0,-237.855:151:90:61:2170:3299	.	0/1:-168.813,0,-238.215:159:88:71:2625:3353:88,71	0/1:-572.405,0,-524.923:446:208:238:8639:7676:208,238	.	0/1:-459.311,0,-435.633:359:172:186:6762:6304:172,186	.	.	0/1:-297.634,0,-334.617:253:127:125:4520:4766	0/1:-244.613,0,-243.287:190:92:98:3530:3507	0/1:-353.325,0,-373.811:290:143:147:5328:5371	0/1:-388.571,0,-363.936:305:144:161:5874:5334	.	.	.
+chr12	33030802	.	T	C	3005.45	.	AB=0.505837;ABP=3.08634;AC=1;AF=0.5;AN=2;AO=130;CIGAR=1X;DP=257;DPB=257;DPRA=0;EPP=4.68066;EPPR=5.94613;GTI=0;LEN=1;MEANALT=3;MQM=38.2692;MQMR=41.392;NS=1;NUMALT=1;ODDS=692.031;PAIRED=1;PAIREDR=0.992;PAO=0;PQA=0;PQR=0;PRO=0;QA=4751;QR=4664;RO=125;RPL=49;RPP=20.1148;RPPR=8.03074;RPR=81;RUN=1;SAF=81;SAP=20.1148;SAR=49;SF=3;SRF=74;SRP=12.2;SRR=51;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	0/1:-310.931,0,-323.496:257:125:130:4751:4664:125,130	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr12	33030841	.	CCGCCTGGCCGACAGT	CCAGG	2292.25	.	AB=0.3875;ABP=46.9826;AC=1;AF=0.5;AN=2;AO=155;CIGAR=1M11D3M1X;DP=400;DPB=293.125;DPRA=0;EPP=5.37791;EPPR=15.9917;GTI=0;LEN=5;MEANALT=13;MQM=27.4774;MQMR=38.5328;NS=1;NUMALT=1;ODDS=527.81;PAIRED=0.987097;PAIREDR=0.9869;PAO=8;PQA=142;PQR=0;PRO=2;QA=5774;QR=8123;RO=229;RPL=102;RPP=36.6471;RPPR=4.61283;RPR=53;RUN=1;SAF=85;SAP=6.16244;SAR=70;SF=25;SRF=133;SRP=15.9917;SRR=96;TYPE=complex	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-243.254,0,-559.791:400:229:155:5774:8123:229,155	.	.	.	.	.	.	.	.	.	.	.
+chr12	33031884	.	G	T	1240.14	.	AB=0.293233;ABP=52.3991;AC=2;AF=0.5;AN=4;AO=39;CIGAR=1X;DP=292;DPB=133;DPRA=0;EPP=12.42;EPPR=22.6469;GTI=0;LEN=1;MEANALT=2;MQM=41.9487;MQMR=41.3548;NS=1;NUMALT=1;ODDS=153.408;PAIRED=0;PAIREDR=0.0107527;PAO=0;PQA=0;PQR=0;PRO=0;QA=1375;QR=3314;RO=93;RPL=15;RPP=7.52028;RPPR=11.4393;RPR=24;RUN=1;SAF=27;SAP=15.538;SAR=12;SF=21,22;SRF=50;SRP=4.15441;SRR=43;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-80.0027,0,-244.657:133:93:39:1375:3314:93,39	0/1:-191.643,0,-189.302:159:80:78:2754:2720	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr12	33049457	.	C	A	407.39	.	AB=0.517857;ABP=3.16541;AC=1;AF=0.5;AN=2;AO=29;CIGAR=1X;DP=56;DPB=56;DPRA=0;EPP=15.6647;EPPR=12.7417;GTI=0;LEN=1;MEANALT=1;MQM=30.3793;MQMR=32.7778;NS=1;NUMALT=1;ODDS=83.86;PAIRED=1;PAIREDR=0.925926;PAO=0;PQA=0;PQR=0;PRO=0;QA=978;QR=864;RO=27;RPL=9;RPP=12.0706;RPPR=38.4777;RPR=20;RUN=1;SAF=20;SAP=12.0706;SAR=9;SF=10;SRF=20;SRP=16.6021;SRR=7;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	0/1:-49.2835,0,-48.0318:56:27:29:978:864:27,29	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr12	33049590	.	C	T	1204.01	.	AB=0.608108;ABP=10.5224;AC=2;AF=0.5;AN=4;AO=45;CIGAR=1X;DP=338;DPB=74;DPRA=0;EPP=4.21667;EPPR=3.08518;GTI=0;LEN=1;MEANALT=1;MQM=23.7556;MQMR=32.2414;NS=1;NUMALT=1;ODDS=120.105;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1606;QR=1090;RO=29;RPL=31;RPP=16.956;RPPR=3.08518;RPR=14;RUN=1;SAF=20;SAP=4.21667;SAR=25;SF=1,5;SRF=10;SRP=9.07545;SRR=19;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	0/1:-66.448,0,-59.0508:74:29:45:1606:1090	.	.	.	0/1:-193.148,0,-269.592:264:134:130:4775:4942:134,130	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr12	98927830	.	C	G	5656.41	.	AB=0.52967;ABP=6.48943;AC=7;AF=0.5;AN=14;AO=241;CIGAR=1X;DP=3078;DPB=455;DPRA=0;EPP=36.5375;EPPR=47.2109;GTI=0;LEN=1;MEANALT=1;MQM=41.5768;MQMR=41.8131;NS=1;NUMALT=1;ODDS=1244.55;PAIRED=0.987552;PAIREDR=0.995327;PAO=0;PQA=0;PQR=0;PRO=0;QA=8841;QR=8012;RO=214;RPL=144;RPP=22.914;RPPR=7.92148;RPR=97;RUN=1;SAF=136;SAP=11.6692;SAR=105;SF=2,10,12,15,17,23,24;SRF=128;SRP=20.9097;SRR=86;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	0/1:-623.986,0,-554.822:455:214:241:8841:8012	.	.	.	.	.	.	.	0/1:-593.22,0,-510.862:417:195:222:8317:7377:195,222	.	0/1:-627.82,0,-793.742:535:292:243:9128:11062:292,243	.	.	0/1:-622.012,0,-575.072:451:218:233:8787:8257	.	0/1:-646.645,0,-687.357:511:259:250:9270:9747	.	.	.	.	.	0/1:-648.349,0,-609.477:479:230:247:9175:8743	0/1:-298.916,0,-302.117:230:116:113:4285:4294:116,113	.	.	.	.	.	.	.	.	.	.	.	.
+chr12	98940228	.	ATTCA	ATTTCA	1063.43	.	AB=0.5625;ABP=5.18177;AC=5;AF=0.5;AN=10;AO=36;CIGAR=1M1I4M;DP=529;DPB=71.2;DPRA=0;EPP=11.6962;EPPR=7.97367;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=42;NS=1;NUMALT=1;ODDS=146.361;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1308;QR=1043;RO=28;RPL=19;RPP=3.25157;RPPR=5.80219;RPR=17;RUN=1;SAF=13;SAP=9.04217;SAR=23;SF=6,13,21,22,31;SRF=7;SRP=18.2106;SRR=21;TYPE=ins	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	0/1:-94.608,0,-71.5442:64:28:36:1308:1043:28,36	.	.	.	.	.	.	0/1:.,.,-183.743:149:70:77:2842:2636	.	.	.	.	.	.	.	0/1:-40.6902,0,-212.925:100:76:23:812:2792:76,23	0/1:.,.,-118.744:92:46:45:1587:1688	.	.	.	.	.	.	.	.	0/1:.,.,-179.846:124:68:56:2003:2512	.	.	.	.	.
+chr12	98941637	.	A	G	889.95	.	AB=0.534653;ABP=4.06379;AC=1;AF=0.5;AN=2;AO=54;CIGAR=1X;DP=101;DPB=101;DPRA=0;EPP=4.45795;EPPR=4.16534;GTI=0;LEN=1;MEANALT=1;MQM=30.0741;MQMR=36.0426;NS=1;NUMALT=1;ODDS=204.919;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2010;QR=1732;RO=47;RPL=43;RPP=44.1879;RPPR=31.8863;RPR=11;RUN=1;SAF=13;SAP=34.5369;SAR=41;SF=23;SRF=10;SRP=36.6912;SRR=37;TYPE=snp	GT:GL:DP:RO:AO:QA:QR	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-102.795,0,-109.044:101:47:54:2010:1732	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr12	111350901	.	T	G	3340.04	.	AB=0.507143;ABP=3.13438;AC=1;AF=0.5;AN=2;AO=142;CIGAR=1X;DP=280;DPB=280;DPRA=0;EPP=6.92507;EPPR=7.03854;GTI=0;LEN=1;MEANALT=1;MQM=41.9577;MQMR=41.6087;NS=1;NUMALT=1;ODDS=742.487;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=4920;QR=4831;RO=138;RPL=49;RPP=32.6157;RPPR=39.2644;RPR=93;RUN=1;SAF=86;SAP=16.7732;SAR=56;SF=28;SRF=80;SRP=10.6262;SRR=58;TYPE=snp	GT:GL:DP:RO:AO:QA:QR	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-345.617,0,-334.133:280:138:142:4920:4831	.	.	.	.	.	.	.	.
+chr12	111350999	.	G	A,T	5082.45	.	AB=0.436364;ABP=8.81405;AC=14,1;AF=0.5;AN=28;AO=72;CIGAR=1X;DP=5411;DPB=165;DPRA=0;EPP=3.49285;EPPR=5.3706;GTI=0;LEN=1;MEANALT=2;MQM=41.7222;MQMR=41.7717;NS=1;NUMALT=1;ODDS=382.181;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=2632;QR=3281;RO=92;RPL=56;RPP=51.2652;RPPR=24.253;RPR=16;RUN=1;SAF=36;SAP=3.0103;SAR=36;SF=1,2,4,5,7,11,13,19,21,26,27,31,33,35;SRF=52;SRP=6.40913;SRR=40;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	0/1:-177.877,0,-234.882,.,.,.:165:92:72,.:2632,.:3281	0/1:-548.629,0,-470.615,.,.,.:408:191:217,.:7779,.:6836	.	0/1:-684.986,0,-599.761,.,.,.:507:239:268,.:9665,.:8696	0/1:-537.397,0,-618.063,.,.,.:462:243:219,.:7821,.:8781:243,219	.	0/1:-684.532,0,-512.463,.,.,.:477:212:264,.:9588,.:7597	.	.	.	0/1:-627.953,0,-577.181,.,.,.:500:243:256,.:8958,.:8348	.	0/1:-478.693,0,-659.969,.,.,.:460:259:201,.:7108,.:9182	.	.	.	.	.	0/1:-613.642,0,-431.997,.,.,.:420:180:238,.:8574,.:6419	.	0/1:-60.8106,0,-397.309,.,.,.:192:153:39,.:1361,.:5218:153,39	.	.	.	.	0/1:-644.161,0,-576.671,.,.,.:513:245:266,.:9267,.:8411	0/1:-665.85,0,-574.714,.,.,.:506:239:266,.:9417,.:8412:239,266	.	.	.	0/1:-366.969,0,-232.918,.,.,.:247:100:147,.:5066,.:3553	.	1/2:-971.479,-488.314,-442.877,-477.701,0,-428.651:356:2:171,183:6164,6301:77	.	0/1:-233.321,0,-263.433,.,.,.:198:105:93,.:3408,.:3712	.
+chr12	111351003	.	AGGGGGCA	AGGGGGGCA	2811.97	.	AB=0.520362;ABP=3.80618;AC=4;AF=0.5;AN=8;AO=115;CIGAR=1M1I6M;DP=1201;DPB=260.429;DPRA=0;EPP=8.4673;EPPR=4.71796;GTI=0;LEN=1;MEANALT=4;MQM=41.7391;MQMR=42;NS=1;NUMALT=1;ODDS=519.927;PAIRED=0.991304;PAIREDR=1;PAO=18.5;PQA=618;PQR=618;PRO=18.5;QA=3989;QR=3691;RO=103;RPL=72;RPP=18.8904;RPPR=18.3793;RPR=43;RUN=1;SAF=59;SAP=3.18024;SAR=56;SF=18,20,30,31;SRF=56;SRP=4.71796;SRR=47;TYPE=ins	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:.,.,-234.407:221:103:115:3989:3691	.	0/1:-413.263,0,-619.615:431:240:185:6226:8578:240,185	.	.	.	.	.	.	.	.	.	0/1:.,.,-379.556:319:161:153:5235:5727	0/1:.,.,-303.742:230:128:92:3019:4603	.	.	.	.	.
+chr12	111351029	.	TCCCCCACAG	TCCCCACAG	4164.27	.	AB=0.492424;ABP=3.0761;AC=18;AF=0.5;AN=34;AO=65;CIGAR=1M1D5M;DP=5988;DPB=129.714;DPRA=0;EPP=4.64726;EPPR=7.05258;GTI=0;LEN=1;MEANALT=3;MQM=41.6923;MQMR=41.7077;NS=1;NUMALT=1;ODDS=324.741;PAIRED=0;PAIREDR=0;PAO=7.5;PQA=239;PQR=306;PRO=9.5;QA=2270;QR=2365;RO=65;RPL=33;RPP=3.04371;RPPR=10.5269;RPR=32;RUN=1;SAF=21;SAP=20.6827;SAR=44;SF=1,2,4,5,7,11,13,18,19,20,21,26,27,30,31,33,35;SRF=34;SRP=3.31097;SRR=31;TYPE=del	GT:GL:DP:RO:AO:QA:QR:AD	.	0/1:.,.,-162.522:132:65:65:2270:2365	0/1:.,.,-421.389:376:181:189:6477:6426	.	0/1:.,.,-518.034:469:213:246:8804:7741	0/1:-471.367,0,-540.099:421:212:197:6915:7669:212,197	.	0/1:.,.,-470.063:442:201:233:8078:7230	.	.	.	0/1:.,.,-542.158:479:229:239:8198:8029	.	0/1:.,.,-550.698:403:221:176:6002:7839	.	.	.	.	0/1:.,.,-217.038:210:94:113:3883:3281	0/1:.,.,-402.387:411:181:224:7860:6399	0/1:-431.608,0,-569.171:416:224:184:6403:7955:224,184	0/1:-52.5225,0,-317.376:161:122:37:1160:4166:122,37	.	.	.	.	0/1:.,.,-507.36:489:225:255:8485:7662	0/1:-619.652,0,-596.285:521:242:263:8867:8589:242,263	.	.	0/1:.,.,-346.524:291:142:147:4990:5040	1/1:.,.,0:256:1:249:8371:33	.	0/1:.,.,-418.094:332:167:164:5796:5976	.	0/1:.,.,-210.972:179:87:90:3140:3105	.
+chr12	111351186	.	C	T	1605.00	.	AB=0.666667;ABP=28.3441;AC=4;AF=0.5;AN=8;AO=70;CIGAR=1X;DP=523;DPB=105;DPRA=0;EPP=3.0103;EPPR=4.56135;GTI=0;LEN=1;MEANALT=1;MQM=41.9714;MQMR=42;NS=1;NUMALT=1;ODDS=163.018;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2540;QR=1313;RO=35;RPL=61;RPP=86.8912;RPPR=10.5174;RPR=9;RUN=1;SAF=26;SAP=13.0611;SAR=44;SF=18,20,30,31;SRF=8;SRP=25.4075;SRR=27;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-188.866,0,-82.2682:105:35:70:2540:1313	.	0/1:-214.177,0,-224.136:168:85:81:3057:3165:85,81	.	.	.	.	.	.	.	.	.	0/1:-151.357,0,-134.998:111:53:58:2132:1954	0/1:-153.651,0,-187.486:139:77:62:2253:2638	.	.	.	.	.
+chr12	111351963	.	GACACACACACACACACACG	GACACACACACACACACACACG	534.27	.	AB=0.325926;ABP=38.542;AC=2;AF=0.5;AN=4;AO=44;CIGAR=1M2I19M;DP=216;DPB=139.05;DPRA=0;EPP=3.0103;EPPR=11.6962;GTI=0;LEN=2;MEANALT=13;MQM=41.9091;MQMR=41.1562;NS=1;NUMALT=1;ODDS=204.416;PAIRED=0.977273;PAIREDR=1;PAO=0.333333;PQA=9;PQR=9;PRO=0.333333;QA=1534;QR=2297;RO=64;RPL=9;RPP=36.372;RPPR=94.755;RPR=35;RUN=1;SAF=29;SAP=12.6832;SAR=15;SF=20,31;SRF=44;SRP=22.5536;SRR=20;TYPE=ins	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-99.8944,0,-164.666:135:64:44:1534:2297:64,44	.	.	.	.	.	.	.	.	.	.	0/1:-27.2507,0,-53.7034:81:34:31:923:1224	.	.	.	.	.
+chr12	111351973	.	CA	CAGA	1200.08	.	AB=0.360947;ABP=31.3936;AC=1;AF=0.5;AN=2;AO=61;CIGAR=1M2I1M;DP=169;DPB=233.5;DPRA=0;EPP=3.0459;EPPR=4.26209;GTI=0;LEN=2;MEANALT=3;MQM=41.3279;MQMR=42;NS=1;NUMALT=1;ODDS=276.328;PAIRED=1;PAIREDR=1;PAO=2.5;PQA=0;PQR=0;PRO=2.5;QA=2115;QR=2991;RO=85;RPL=6;RPP=88.4809;RPPR=110.945;RPR=55;RUN=1;SAF=35;SAP=5.89373;SAR=26;SF=33;SRF=49;SRP=7.3277;SRR=36;TYPE=ins	GT:GL:DP:RO:AO:QA:QR	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-136.935,0,-214.167:169:85:61:2115:2991	.	.	.
+chr12	111353556	.	A	G	2685.26	.	AB=0.466292;ABP=4.767;AC=5;AF=0.5;AN=10;AO=83;CIGAR=1X;DP=1123;DPB=178;DPRA=0;EPP=6.17594;EPPR=19.6735;GTI=0;LEN=1;MEANALT=1;MQM=41.9518;MQMR=41.6;NS=1;NUMALT=1;ODDS=469.947;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3051;QR=3589;RO=95;RPL=38;RPP=4.29225;RPPR=3.21602;RPR=45;RUN=1;SAF=41;SAP=3.03646;SAR=42;SF=18,20,30,31,33;SRF=53;SRP=5.77607;SRR=42;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-211.114,0,-255.231:178:95:83:3051:3589	.	0/1:-413.225,0,-500.143:347:186:161:5969:7014:186,161	.	.	.	.	.	.	.	.	.	0/1:-213.943,0,-315.151:199:114:84:3159:4340	0/1:-253.326,0,-216.094:180:84:96:3545:3131	.	0/1:-293.98,0,-288.53:219:109:110:4152:4090	.	.	.
+chr12	111358266	.	C	T	682.75	.	AB=0.461538;ABP=3.84548;AC=1;AF=0.5;AN=2;AO=30;CIGAR=1X;DP=65;DPB=65;DPRA=0;EPP=10.2485;EPPR=6.05036;GTI=0;LEN=1;MEANALT=1;MQM=41.4;MQMR=42;NS=1;NUMALT=1;ODDS=157.209;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1119;QR=1304;RO=35;RPL=7;RPP=21.5402;RPPR=41.7866;RPR=23;RUN=1;SAF=17;SAP=4.16842;SAR=13;SF=33;SRF=19;SRP=3.56868;SRR=16;TYPE=snp	GT:GL:DP:RO:AO:QA:QR	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-76.5915,0,-93.955:65:35:30:1119:1304	.	.	.
+chr14	23854155	.	G	A	4662.58	.	AB=0.470588;ABP=4.03217;AC=9;AF=0.5;AN=16;AO=64;CIGAR=1X;DP=2691;DPB=136;DPRA=0;EPP=4.23175;EPPR=3.49285;GTI=0;LEN=1;MEANALT=1;MQM=39.3906;MQMR=41.3472;NS=1;NUMALT=1;ODDS=345.638;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=2385;QR=2640;RO=72;RPL=37;RPP=6.40323;RPPR=3.49285;RPR=27;RUN=1;SAF=30;SAP=3.55317;SAR=34;SF=1,4,7,12,13,16,20,28;SRF=34;SRP=3.49285;SRR=38;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	0/1:-156.893,0,-187.336:136:72:64:2385:2640	.	.	0/1:-485.446,0,-531.513:410:209:201:7362:7571	.	.	0/1:-445.518,0,-630.708:430:241:187:6888:8807	.	.	.	.	1/1:-1227.41,-118.935,0:403:1:401:14869:34:1,401	0/1:-428.249,0,-501.862:369:195:174:6373:7066	.	.	0/1:-443.248,0,-455.64:354:178:176:6600:6539:178,176	.	.	.	0/1:-358.687,0,-503.173:340:191:149:5480:7015:191,149	.	.	.	.	.	.	.	0/1:-253.811,0,-346.846:249:137:111:3988:4935	.	.	.	.	.	.	.	.
+chr14	23854272	.	T	C	2493.41	.	AB=0.393258;ABP=20.6261;AC=4;AF=0.5;AN=8;AO=70;CIGAR=1X;DP=812;DPB=178;DPRA=0;EPP=3.0103;EPPR=6.44001;GTI=0;LEN=1;MEANALT=2;MQM=41.4857;MQMR=41.6542;NS=1;NUMALT=1;ODDS=345.173;PAIRED=1;PAIREDR=0.990654;PAO=0;PQA=0;PQR=0;PRO=0;QA=2559;QR=4051;RO=107;RPL=61;RPP=86.8912;RPPR=105.313;RPR=9;RUN=1;SAF=26;SAP=13.0611;SAR=44;SF=3,27,31,35;SRF=44;SRP=10.3365;SRR=63;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	0/1:-168.117,0,-295.734:178:107:70:2559:4051:107,70	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-408.395,0,-308.073:285:124:161:5703:4624:124,161	.	.	.	0/1:-304.369,0,-222.021:203:86:116:4198:3272	.	.	.	0/1:-194.029,0,-169.066:146:69:77:2762:2456	.
+chr14	23855233	.	C	T	5803.53	.	AB=0.502288;ABP=3.05005;AC=1;AF=0.5;AN=2;AO=439;CIGAR=1X;DP=874;DPB=874;DPRA=0;EPP=53.4686;EPPR=46.1852;GTI=0;LEN=1;MEANALT=1;MQM=24.1071;MQMR=32.7655;NS=1;NUMALT=1;ODDS=1336.31;PAIRED=0.997722;PAIREDR=0.997701;PAO=0;PQA=0;PQR=0;PRO=0;QA=15968;QR=15822;RO=435;RPL=222;RPP=3.13396;RPPR=3.61432;RPR=217;RUN=1;SAF=237;SAP=9.06965;SAR=202;SF=23;SRF=215;SRP=3.1351;SRR=220;TYPE=snp	GT:GL:DP:RO:AO:QA:QR	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-593.882,0,-890.562:874:435:439:15968:15822	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr14	23855320	.	G	A	4785.46	.	AB=0.495614;ABP=3.0484;AC=9;AF=0.5;AN=16;AO=113;CIGAR=1X;DP=4547;DPB=228;DPRA=0;EPP=3.49071;EPPR=3.18024;GTI=0;LEN=1;MEANALT=1;MQM=20.531;MQMR=31.6174;NS=1;NUMALT=1;ODDS=296.853;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=4245;QR=4300;RO=115;RPL=60;RPP=3.95191;RPPR=14.8118;RPR=53;RUN=1;SAF=47;SAP=9.94748;SAR=66;SF=1,4,7,12,13,16,20,28;SRF=52;SRP=5.29507;SRR=63;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	0/1:-136.411,0,-243.583:228:115:113:4245:4300	.	.	0/1:-379.947,0,-799.785:663:362:299:11027:13471	.	.	0/1:-471.524,0,-820.41:728:388:340:12493:14294	.	.	.	.	1/1:-1479.1,-223.966,0:744:0:744:27704:0:0,744	0/1:-534.742,0,-559.763:638:290:347:12790:10395	.	.	0/1:-362.869,0,-625.221:529:285:244:9133:10518:285,244	.	.	.	0/1:-389.815,0,-786.843:683:365:318:11656:13599:365,318	.	.	.	.	.	.	.	0/1:-185.501,0,-323.566:334:166:168:5797:6124	.	.	.	.	.	.	.	.
+chr14	23855569	.	A	G	3525.40	.	AB=0.50565;ABP=3.10845;AC=38;AF=0.5;AN=56;AO=179;CIGAR=1X;DP=10482;DPB=354;DPRA=0;EPP=5.7398;EPPR=15.7895;GTI=0;LEN=1;MEANALT=2;MQM=21.3687;MQMR=33.6897;NS=1;NUMALT=1;ODDS=453.687;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=6384;QR=6364;RO=174;RPL=74;RPP=14.6683;RPPR=31.7636;RPR=105;RUN=1;SAF=116;SAP=37.0866;SAR=63;SF=0,1,3,4,5,6,7,8,11,12,13,14,15,16,17,20,24,25,26,27,28,29,30,31,32,33,34,35;SRF=110;SRP=29.4174;SRR=64;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	0/1:-208.973,0,-376.059:354:174:179:6384:6364:174,179	1/1:-253.733,-49.67,0:165:0:165:5873:0	.	0/1:-137.954,0,-336.336:326:169:155:5500:6159:169,155	0/1:-247.646,0,-424.099:407:205:202:7112:7422	0/1:-196.823,0,-439.874:384:204:180:6434:7393:204,180	0/1:-165.221,0,-289.914:291:142:146:5091:5140:142,146	1/1:-806.126,-135.537,0:461:1:458:16397:34	0/1:-134.712,0,-322.361:282:155:127:4484:5634	.	.	0/1:-264.446,0,-496.965:492:248:244:8339:8812	1/1:-836.611,-144.494,0:483:0:480:17249:0:0,480	0/1:-284.79,0,-456.137:455:223:232:8161:8079	0/1:-184.955,0,-254.571:281:131:149:5385:4678	1/1:-718.516,-123.89,0:417:1:415:14525:15	0/1:-230.759,0,-332.692:344:165:179:6405:6029:165,179	0/1:-186.921,0,-470.722:382:215:165:5843:7892	.	.	1/1:-705.051,-117.703,0:392:0:391:14214:0:0,391	.	.	.	0/1:-113.774,0,-226.558:207:108:99:3425:3885:108,99	0/1:-342.373,0,-637.297:634:324:308:11118:11598:324,308	0/1:-247.007,0,-519.1:495:261:229:7779:9018	1/1:-891.548,-149.311,0:498:0:496:17254:0:0,496	1/1:-411.556,-79.1709,0:264:0:263:8849:0	1/1:-1036.17,-175.11,0:591:1:589:20442:30	0/1:-172.671,0,-331.566:338:168:168:5871:6023	0/1:-211.912,0,-304.77:327:152:174:6055:5377	0/1:-104.244,0,-393.737:312:183:128:4320:6651	0/1:-180.426,0,-309.704:305:153:151:5490:5480	1/1:-564.078,-93.1572,0:338:3:333:11761:112	1/1:-430.889,-77.3647,0:257:0:257:9112:0	.
+chr14	23855849	.	C	T	1183.73	.	AB=0.48125;ABP=3.49888;AC=21;AF=0.5;AN=38;AO=77;CIGAR=1X;DP=3166;DPB=160;DPRA=0;EPP=7.77626;EPPR=10.5712;GTI=0;LEN=1;MEANALT=1;MQM=27.2338;MQMR=35.0482;NS=1;NUMALT=1;ODDS=208.307;PAIRED=1;PAIREDR=0.987952;PAO=0;PQA=0;PQR=0;PRO=0;QA=2588;QR=2919;RO=83;RPL=65;RPP=82.2267;RPPR=82.1513;RPR=12;RUN=1;SAF=20;SAP=41.6174;SAR=57;SF=0,5,6,7,11,14,15,17,20,24,25,26,27,28,29,30,32,34,35;SRF=19;SRP=55.989;SRR=64;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	0/1:-109.857,0,-180.924:160:83:77:2588:2919:83,77	.	.	.	.	0/1:-126.861,0,-199.093:187:97:90:3179:3337:97,90	0/1:-125.159,0,-143.614:149:72:77:2705:2523:72,77	0/1:-147.052,0,-242.127:211:115:96:3349:3964	.	.	.	0/1:-135.873,0,-170.979:176:88:88:3070:2937	.	.	0/1:-99.9281,0,-147.823:142:71:71:2531:2442	1/1:-363.702,-49.5236,0:169:1:168:5890:14	.	0/1:-125.639,0,-163.636:173:81:89:3111:2855	.	.	0/1:-140.222,0,-181.587:201:98:101:3560:3407:98,101	.	.	.	0/1:-70.3182,0,-79.7951:90:42:46:1649:1382:42,46	0/1:-129.951,0,-282.073:248:143:102:3602:4825:143,102	0/1:-151.348,0,-238.328:236:126:106:3538:4028	0/1:-118.949,0,-208.641:188:104:83:2898:3505:104,83	0/1:-133.716,0,-101.063:135:57:77:2726:1891	1/1:-487.091,-68.7844,0:248:3:244:8433:62	0/1:-84.8898,0,-92.8616:115:47:68:2367:1680	.	0/1:-107.115,0,-163.113:144:79:64:2250:2651	.	0/1:-85.499,0,-129.108:131:64:65:2248:2188	0/1:-45.2696,0,-55.7358:63:29:34:1192:1009	.
+chr14	23856714	.	G	A	2658.02	.	AB=0.58871;ABP=19.9618;AC=3;AF=0.5;AN=6;AO=146;CIGAR=1X;DP=640;DPB=248;DPRA=0;EPP=11.5772;EPPR=5.61177;GTI=0;LEN=1;MEANALT=2;MQM=41.8219;MQMR=41.2376;NS=1;NUMALT=1;ODDS=465.777;PAIRED=0.993151;PAIREDR=0.980198;PAO=0;PQA=0;PQR=0;PRO=0;QA=5117;QR=3412;RO=101;RPL=38;RPP=75.8885;RPPR=58.9311;RPR=108;RUN=1;SAF=93;SAP=26.8073;SAR=53;SF=11,27,28;SRF=77;SRP=63.403;SRR=24;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	.	0/1:-369.88,0,-223.002:248:101:146:5117:3412	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-255.874,0,-261.275:221:111:109:3749:3781:111,109	0/1:-226.235,0,-200.671:171:82:89:3201:2907	.	.	.	.	.	.	.	.
+chr14	23857351	.	G	A	3650.71	.	AB=0.476526;ABP=5.04924;AC=26;AF=0.5;AN=46;AO=203;CIGAR=1X;DP=10975;DPB=426;DPRA=0;EPP=4.81808;EPPR=3.1668;GTI=0;LEN=1;MEANALT=2;MQM=23.0197;MQMR=34.2928;NS=1;NUMALT=1;ODDS=576.056;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=7188;QR=8032;RO=222;RPL=77;RPP=28.6936;RPPR=23.7078;RPR=126;RUN=1;SAF=124;SAP=24.6715;SAR=79;SF=0,1,4,8,11,12,13,15,16,17,19,20,24,25,26,27,28,29,30,32,33,34,35;SRF=131;SRP=18.6606;SRR=91;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	0/1:-262.466,0,-490.8:426:222:203:7188:8032:222,203	1/1:-320.831,-61.1091,0:204:0:203:7219:0	.	.	0/1:-361.783,0,-619.294:578:293:284:9842:10656	.	.	.	0/1:-260.418,0,-392.094:382:187:195:6965:6894	.	.	0/1:-379.036,0,-665.992:598:317:278:9357:11148	1/1:-1157.41,-178.249,0:625:6:616:21781:108:6,616	0/1:-335.274,0,-595.264:534:281:251:8678:9909	.	1/1:-1029.55,-164.746,0:561:3:555:19355:47	0/1:-264.539,0,-507.434:430:229:201:7210:8388:229,201	0/1:-415.525,0,-594.937:580:276:301:10711:10186	.	0/1:-248.496,0,-484.146:418:221:197:7106:8015	0/1:-329.626,0,-628.926:560:286:272:9610:10455:286,272	.	.	.	0/1:-137.02,0,-322.553:246:143:102:3607:5199:143,102	0/1:-459.726,0,-738.149:716:364:348:11966:12713:364,348	0/1:-403.63,0,-680.579:655:338:317:10710:11642	0/1:-459.051,0,-539.612:569:268:301:10279:9527:268,301	0/1:-145.795,0,-318.676:313:161:151:5088:5739	0/1:-383.807,0,-615.172:600:305:294:10178:10580	0/1:-284.236,0,-485.599:439:226:212:7569:8228	.	0/1:-279.378,0,-484.316:450:229:221:7770:8232	0/1:-305.767,0,-440.073:435:208:225:7817:7542	0/1:-285.883,0,-384.213:404:184:219:7679:6690	0/1:-188.535,0,-216.919:252:111:141:4996:3917	.
+chr14	23858099	.	T	C	5028.06	.	AB=0.483592;ABP=4.36419;AC=1;AF=0.5;AN=2;AO=280;CIGAR=1X;DP=579;DPB=579;DPRA=0;EPP=14.2089;EPPR=3.19308;GTI=0;LEN=1;MEANALT=2;MQM=31.4393;MQMR=32.6498;NS=1;NUMALT=1;ODDS=1157.75;PAIRED=0.989286;PAIREDR=0.986532;PAO=0;PQA=0;PQR=0;PRO=0;QA=10165;QR=10889;RO=297;RPL=115;RPP=22.3984;RPPR=60.9235;RPR=165;RUN=1;SAF=128;SAP=7.47733;SAR=152;SF=36;SRF=145;SRP=3.36856;SRR=152;TYPE=snp	GT:GL:DP:RO:AO:QA:QR	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-513.867,0,-596.718:579:297:280:10165:10889
+chr14	23858232	.	C	T	4912.84	.	AB=0.476923;ABP=3.9123;AC=8;AF=0.5;AN=14;AO=93;CIGAR=1X;DP=3359;DPB=195;DPRA=0;EPP=9.75821;EPPR=3.54779;GTI=0;LEN=1;MEANALT=2;MQM=19.3118;MQMR=30.7822;NS=1;NUMALT=1;ODDS=186.664;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=3362;QR=3499;RO=101;RPL=64;RPP=31.613;RPPR=18.6836;RPR=29;RUN=1;SAF=48;SAP=3.22044;SAR=45;SF=1,4,12,13,16,20,28;SRF=47;SRP=4.06379;SRR=54;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	0/1:-91.2226,0,-189.019:195:101:93:3362:3499	.	.	0/1:-502.821,0,-445.102:560:248:309:11207:8138	.	.	.	.	.	.	.	1/1:-1424.84,-213.601,0:739:4:734:26553:106:4,734	0/1:-450.627,0,-302.715:441:179:256:9217:5806	.	.	0/1:-387.611,0,-387.382:470:212:256:9363:7117:212,256	.	.	.	0/1:-533.922,0,-526.484:653:305:343:12659:10351:305,343	.	.	.	.	.	.	.	0/1:-156.221,0,-207.167:301:134:164:5805:4399	.	.	.	.	.	.	.	.
+chr14	23858271	.	AGGGGGGGGGGCACC	AGGGGGGGGGCACC,AGGGGGGGGCACC	2398.45	.	AB=0.494737,0.473684;ABP=3.03316,3.58174;AC=13,8;AF=0.5,0.5;AN=36;AO=47,45;CIGAR=1M1D10M,1M2D9M;DP=3641;DPB=87.75;DPRA=0,0;EPP=4.16534,8.84915;EPPR=5.18177;GTI=0;LEN=1,2;MEANALT=4,4;MQM=32.8723,31.2889;MQMR=42;NS=1;NUMALT=2;ODDS=124.149;PAIRED=0,0;PAIREDR=0;PAO=3.5,3;PQA=117.667,99.6667;PQR=117.667;PRO=3.5;QA=1245,1168;QR=32;RO=1;RPL=34,31;RPP=23.3852,16.956;RPPR=5.18177;RPR=13,14;RUN=1,1;SAF=18,20;SAP=8.60069,4.21667;SAR=29,25;SF=1,4,8,11,12,13,16,19,20,21,22,27,28,29,32,34,35,36;SRF=1;SRP=5.18177;SRR=0;TYPE=del,del	GT:GL:DP:RO:AO:QA:QR:AD	.	1/2:.,.,-61.8806,.,0,-69.0706:95:1:47,45:1245,1168:32	.	.	0/2:.,.,.,.,.,-175.883:290:93:.,150:.,4495:3141	.	.	.	0/1:.,.,-54.2371,.,.,.:173:45:107,.:2978,.:1468	.	.	0/1:.,.,-149.932,.,.,.:280:86:151,.:4405,.:2815	2/2:-751.891,.,.,-90.61,.,0:321:0:.,301:.,8838:0:0,301	0/2:.,.,.,.,.,-117.064:242:72:.,142:.,4099:2290	.	.	0/2:-246.759,.,.,0,.,-129.037:212:65:.,118:.,3542:2216:65,118	.	.	0/1:.,.,-95.8192,.,.,.:236:65:140,.:4039,.:2051	0/2:-344.94,.,.,0,.,-124.785:276:71:.,169:.,4928:2453:71,169	0/1:-59.3542,0,-57.9423,.,.,.:91:29:34,.:923,.:916:29,34	0/1:.,.,-23.2291,.,.,.:96:21:57,.:1613,.:648	.	.	.	.	0/1:-385.473,0,-118.296,.,.,.:292:70:168,.:5257,.:2285:70,168	0/2:.,.,.,.,.,-64.0168:139:45:.,67:.,1705:1391	0/1:.,.,-122.07,.,.,.:298:85:171,.:4817,.:2758	.	.	0/1:.,.,-71.5848,.,.,.:197:47:117,.:3208,.:1543	.	0/1:.,.,-68.5221,.,.,.:142:43:83,.:2175,.:1404	0/1:.,.,-39.9619,.,.,.:119:32:75,.:2083,.:1035	1/1:.,.,0,.,.,.:142:2:122,.:3518,.:62
+chr14	23858272	.	G	A	2112.83	.	AB=0.675676;ABP=42.6837;AC=1;AF=0.5;AN=2;AO=100;CIGAR=1X;DP=148;DPB=148;DPRA=0;EPP=3.79203;EPPR=4.16534;GTI=0;LEN=1;MEANALT=2;MQM=36.09;MQMR=35.9574;NS=1;NUMALT=1;ODDS=167.025;PAIRED=1;PAIREDR=0.851064;PAO=0;PQA=0;PQR=0;PRO=0;QA=3501;QR=1639;RO=47;RPL=59;RPP=10.0459;RPPR=6.75262;RPR=41;RUN=1;SAF=30;SAP=37.7539;SAR=70;SF=14;SRF=19;SRP=6.75262;SRR=28;TYPE=snp	GT:GL:DP:RO:AO:QA:QR	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-226.291,0,-83.5944:148:47:100:3501:1639	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr14	23859610	.	C	T	1087.15	.	AB=0.365011;ABP=76.2916;AC=11;AF=0.5;AN=20;AO=169;CIGAR=1X;DP=4780;DPB=463;DPRA=0;EPP=5.18177;EPPR=3.077;GTI=0;LEN=1;MEANALT=2;MQM=15.8521;MQMR=13.273;NS=1;NUMALT=1;ODDS=114.216;PAIRED=0.988166;PAIREDR=0.976109;PAO=0;PQA=0;PQR=0;PRO=0;QA=5994;QR=10633;RO=293;RPL=97;RPP=11.0409;RPPR=19.3816;RPR=72;RUN=1;SAF=77;SAP=5.90131;SAR=92;SF=0,15,17,19,24,25,26,29,30,32;SRF=119;SRP=25.4291;SRR=174;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	0/1:-65.2772,0,-181.601:463:293:169:5994:10633:293,169	.	.	.	.	.	.	.	.	.	.	.	.	.	.	1/1:-356.985,-55.9268,0:547:173:371:13225:6226	.	0/1:-51.8723,0,-168.691:507:324:181:6451:11945	.	0/1:-93.4232,0,-210.517:484:296:186:6630:10598	.	.	.	.	0/1:-57.7262,0,-83.9815:174:86:88:3075:3045:86,88	0/1:-158.344,0,-196.654:665:362:301:10723:12928:362,301	0/1:-108.99,0,-177.547:608:369:237:8120:12838	.	.	0/1:-197.414,0,-236.55:640:347:289:10009:12265	0/1:-54.1815,0,-110.103:304:182:119:4198:6661	.	0/1:-50.3032,0,-157.283:388:234:153:5540:8412	.	.	.	.
+chr14	23861811	.	A	G	5075.62	.	AB=0;ABP=0;AC=31;AF=1;AN=44;AO=273;CIGAR=1X;DP=6603;DPB=278;DPRA=0;EPP=27.0715;EPPR=0;GTI=0;LEN=1;MEANALT=3;MQM=40.7326;MQMR=0;NS=1;NUMALT=1;ODDS=383.064;PAIRED=0.879121;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=9619;QR=0;RO=0;RPL=164;RPP=27.0715;RPPR=0;RPR=109;RUN=1;SAF=166;SAP=30.6986;SAR=107;SF=0,1,2,4,8,11,12,13,15,16,20,23,24,25,27,28,29,30,32,33,34,35;SRF=0;SRP=0;SRR=0;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	1/1:-822.012,-82.1812,0:278:0:273:9619:0:0,273	1/1:-346.816,-34.0164,0:113:0:113:3983:0	0/1:-316.715,0,-382.274:292:154:133:4722:5478	.	0/1:-329.551,0,-439.815:324:175:142:5017:6316	.	.	.	0/1:-305.767,0,-360.069:282:146:131:4607:5307	.	.	1/1:-1018.81,-107.063,0:367:1:359:12129:15	1/1:-1126.7,-113.553,0:389:1:380:13397:13:1,380	0/1:-357.284,0,-367.13:315:156:152:5345:5418	.	0/1:-330.355,0,-378.025:300:154:143:5006:5485	0/1:-392.16,0,-395.313:330:163:162:5740:5817:163,162	.	.	.	1/1:-1000.28,-102.952,0:347:0:342:11963:0:0,342	.	.	0/1:-322.97,0,-553.832:368:216:148:5247:7827	1/1:-408.777,-39.6357,0:139:1:135:4783:15:1,135	0/1:-559.597,0,-597.981:492:245:243:8359:8740:245,243	.	0/1:-474.595,0,-499.04:421:204:203:7019:7348:204,203	1/1:-608.34,-62.0122,0:206:0:206:6960:0	1/1:-1281.04,-132.547,0:458:1:445:15198:19	0/1:-270.396,0,-353.792:267:145:116:4087:5144	.	0/1:-314.624,0,-354.598:283:142:138:4774:5210	0/1:-263.054,0,-285.362:233:115:109:3889:4162	0/1:-332.296,0,-359.872:286:143:139:4882:5231	1/1:-318.455,-27.2687,0:113:2:110:3838:72	.
+chr14	23862710	.	C	T	2991.43	.	AB=0.512397;ABP=3.33333;AC=1;AF=0.5;AN=2;AO=124;CIGAR=1X;DP=242;DPB=242;DPRA=0;EPP=23.254;EPPR=24.2834;GTI=0;LEN=1;MEANALT=1;MQM=38.9194;MQMR=40.7966;NS=1;NUMALT=1;ODDS=683.25;PAIRED=0.991935;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=4705;QR=4466;RO=118;RPL=80;RPP=25.7057;RPPR=10.3712;RPR=44;RUN=1;SAF=59;SAP=3.64073;SAR=65;SF=0;SRF=53;SRP=5.66023;SRR=65;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	0/1:-310.282,0,-306.595:242:118:124:4705:4466:118,124	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr14	23865885	.	G	A	3668.73	.	AB=0;ABP=0;AC=30;AF=1;AN=44;AO=189;CIGAR=1X;DP=4707;DPB=189;DPRA=0;EPP=3.02179;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=39.6614;MQMR=0;NS=1;NUMALT=1;ODDS=266.615;PAIRED=0.989418;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=6981;QR=0;RO=0;RPL=33;RPP=176.831;RPPR=0;RPR=156;RUN=1;SAF=111;SAP=15.5221;SAR=78;SF=0,1,2,4,8,11,12,13,15,16,20,23,24,25,27,28,29,30,32,33,34,35;SRF=0;SRP=0;SRR=0;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	1/1:-584.137,-56.8947,0:189:0:189:6981:0:0,189	1/1:-269.508,-23.9712,0:92:1:91:3291:39	0/1:-358.089,0,-260.503:246:106:140:5119:3889	.	0/1:-311.134,0,-322.618:255:128:127:4527:4657	.	.	.	0/1:-143.243,0,-214.711:144:82:62:2273:2999	.	.	1/1:-769.95,-76.7627,0:256:0:255:9159:0	1/1:-824.303,-79.773,0:265:0:265:9751:0:0,265	0/1:-287.732,0,-319.594:242:123:118:4302:4572	.	0/1:-358.739,0,-302.029:265:120:145:5221:4414	0/1:-279.858,0,-246.856:206:97:109:4015:3621:97,109	.	.	.	0/1:-325.129,0,-404.642:287:157:129:4816:5702:157,129	.	.	0/1:-257.803,0,-337.092:232:127:105:3936:4701	1/1:-334.16,-31.6082,0:105:0:105:3909:0:0,105	0/1:-378.224,0,-412.211:316:162:153:5597:5871:162,153	.	0/1:-328.981,0,-305.571:257:123:132:4782:4450:123,132	1/1:-449.53,-43.9738,0:152:1:150:5357:16	1/1:-1057.09,-102.85,0:348:1:345:12506:15	0/1:-178.529,0,-247.419:170:94:75:2725:3482	.	0/1:-234.164,0,-244.735:196:97:99:3527:3527	0/1:-212.29,0,-242.496:182:93:89:3194:3445	0/1:-237.239,0,-221.558:183:89:94:3480:3211	1/1:-373.935,-35.8226,0:119:0:119:4432:0	.
+chr14	23866146	.	G	C	1002.26	.	AB=0.519608;ABP=3.69155;AC=2;AF=0.5;AN=4;AO=106;CIGAR=1X;DP=427;DPB=204;DPRA=0;EPP=21.4473;EPPR=3.09893;GTI=0;LEN=1;MEANALT=1;MQM=19.283;MQMR=33.5306;NS=1;NUMALT=1;ODDS=215.892;PAIRED=0.95283;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=4058;QR=3724;RO=98;RPL=21;RPP=86.9193;RPPR=117.877;RPR=85;RUN=1;SAF=57;SAP=4.32138;SAR=49;SF=30,32;SRF=59;SRP=11.8735;SRR=39;TYPE=snp	GT:GL:DP:RO:AO:QA:QR	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-111.294,0,-212.826:204:98:106:4058:3724	.	0/1:-127.367,0,-192.226:223:98:125:4697:3712	.	.	.	.
+chr14	23866189	.	G	A	2815.59	.	AB=0.507246;ABP=3.19912;AC=2;AF=0.5;AN=4;AO=210;CIGAR=1X;DP=865;DPB=414;DPRA=0;EPP=3.17575;EPPR=6.49326;GTI=0;LEN=1;MEANALT=3;MQM=24.2476;MQMR=34.2525;NS=1;NUMALT=1;ODDS=616.218;PAIRED=0.980952;PAIREDR=0.99505;PAO=0;PQA=0;PQR=0;PRO=0;QA=7796;QR=7458;RO=202;RPL=63;RPP=75.9718;RPPR=71.8094;RPR=147;RUN=1;SAF=116;SAP=8.01503;SAR=94;SF=30,32;SRF=115;SRP=11.4382;SRR=87;TYPE=snp	GT:GL:DP:RO:AO:QA:QR	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-282.821,0,-443.255:414:202:210:7796:7458	.	0/1:-310.16,0,-436.751:451:208:243:9087:7736	.	.	.	.
+chr14	23869993	.	G	A	4820.99	.	AB=0.486583;ABP=3.88433;AC=4;AF=0.5;AN=8;AO=272;CIGAR=1X;DP=2484;DPB=559;DPRA=0;EPP=3.2977;EPPR=16.4036;GTI=0;LEN=1;MEANALT=2;MQM=31.7426;MQMR=36.1224;NS=1;NUMALT=1;ODDS=1110.93;PAIRED=0.992647;PAIREDR=0.98951;PAO=0;PQA=0;PQR=0;PRO=0;QA=9953;QR=10306;RO=286;RPL=92;RPP=64.8334;RPPR=25.1502;RPR=180;RUN=1;SAF=141;SAP=3.80864;SAR=131;SF=14,18,20,36;SRF=136;SRP=4.49844;SRR=150;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-496.347,0,-643.321:559:286:272:9953:10306	.	.	.	0/1:-313.774,0,-567.073:450:245:204:7259:8788	.	0/1:-735.017,0,-990.595:842:445:395:14524:16129:445,395	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-435.12,0,-830.583:633:363:267:9615:12983
+chr14	23871692	.	C	T	4575.45	.	AB=0.521368;ABP=4.40227;AC=1;AF=0.5;AN=2;AO=183;CIGAR=1X;DP=351;DPB=351;DPRA=0;EPP=14.4135;EPPR=4.87156;GTI=0;LEN=1;MEANALT=1;MQM=40.2077;MQMR=40.5238;NS=1;NUMALT=1;ODDS=938.067;PAIRED=0.983607;PAIREDR=0.994048;PAO=0;PQA=0;PQR=0;PRO=0;QA=6874;QR=6118;RO=168;RPL=57;RPP=59.5042;RPPR=25.8108;RPR=126;RUN=1;SAF=99;SAP=5.68014;SAR=84;SF=19;SRF=91;SRP=5.54368;SRR=77;TYPE=snp	GT:GL:DP:RO:AO:QA:QR	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-471.908,0,-417.269:351:168:183:6874:6118	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr14	23871840	.	G	T	3299.80	.	AB=0.542636;ABP=7.08391;AC=1;AF=0.5;AN=2;AO=140;CIGAR=1X;DP=258;DPB=258;DPRA=0;EPP=4.00297;EPPR=3.02886;GTI=0;LEN=1;MEANALT=2;MQM=41.8143;MQMR=42;NS=1;NUMALT=1;ODDS=648.633;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=4752;QR=4277;RO=117;RPL=57;RPP=13.4954;RPPR=55.1442;RPR=83;RUN=1;SAF=73;SAP=3.56868;SAR=67;SF=32;SRF=66;SRP=7.18621;SRR=51;TYPE=snp	GT:GL:DP:RO:AO:QA:QR	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-338.446,0,-294.622:258:117:140:4752:4277	.	.	.	.
+chr14	23871909	.	G	A	1878.37	.	AB=0.458333;ABP=5.54368;AC=1;AF=0.5;AN=2;AO=77;CIGAR=1X;DP=168;DPB=168;DPRA=0;EPP=11.1604;EPPR=41.6143;GTI=0;LEN=1;MEANALT=2;MQM=42;MQMR=41.9778;NS=1;NUMALT=1;ODDS=432.51;PAIRED=1;PAIREDR=0.977778;PAO=0;PQA=0;PQR=0;PRO=0;QA=2847;QR=3298;RO=90;RPL=36;RPP=3.71532;RPPR=12.6613;RPR=41;RUN=1;SAF=30;SAP=11.1604;SAR=47;SF=35;SRF=36;SRP=10.8276;SRR=54;TYPE=snp	GT:GL:DP:RO:AO:QA:QR	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-196.085,0,-235.589:168:90:77:2847:3298	.
+chr14	23872666	.	T	C	5975.70	.	AB=0;ABP=0;AC=62;AF=1;AN=72;AO=195;CIGAR=1X;DP=8743;DPB=198;DPRA=0;EPP=12.3755;EPPR=5.18177;GTI=0;LEN=1;MEANALT=2;MQM=41.8923;MQMR=23;NS=1;NUMALT=1;ODDS=268.546;PAIRED=0.958974;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=6951;QR=33;RO=1;RPL=126;RPP=39.1904;RPPR=5.18177;RPR=69;RUN=1;SAF=81;SAP=15.1371;SAR=114;SF=0,1,2,3,4,5,6,7,8,9,10,11,12,13,14,15,16,17,19,20,21,22,23,24,25,26,27,28,29,30,31,32,33,34,35,36;SRF=1;SRP=5.18177;SRR=0;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	1/1:-602.985,-57.0154,0:198:1:195:6951:33:1,195	1/1:-270.628,-26.4906,0:88:0:88:3100:0	1/1:-818.229,-79.8078,0:285:2:281:9487:60	0/1:-284.139,0,-200.328:206:91:114:3978:3003:91,114	1/1:-821.339,-81.8802,0:272:0:272:9417:0	1/1:-921.203,-89.4059,0:298:0:297:10597:0:0,297	0/1:-196.933,0,-258.523:191:108:83:2911:3617:108,83	1/1:-895.77,-88.3365,0:299:1:296:10299:12	1/1:-587.938,-58.7009,0:195:0:195:6756:0	0/1:-236.86,0,-373.578:258:153:103:3613:5169:153,103	1/1:-786.629,-76.1606,0:253:0:253:9082:0:0,253	1/1:-976.03,-100.243,0:335:0:333:11179:0	1/1:-901.6,-89.1049,0:296:0:296:10365:0:0,296	1/1:-820.337,-82.1812,0:278:0:273:9409:0	1/1:-620.725,-61.7112,0:205:0:205:7109:0	1/1:-809.155,-80.074,0:266:0:266:9293:0	0/1:-242.911,0,-434.696:280:172:108:3752:5972:172,108	1/1:-779.059,-75.2575,0:252:0:250:8975:0	.	1/1:-778.662,-77.0312,0:261:1:260:8985:16	0/1:-380.892,0,-319.177:295:138:153:5421:4673:138,153	0/1:-297.501,0,-51.6009:151:36:114:3935:1120:36,114	1/1:-463.133,-46.4379,0:161:1:158:5317:16	0/1:-289.307,0,-381.364:275:153:121:4268:5323	1/1:-332.459,-32.8123,0:109:0:109:3808:0:0,109	1/1:-1171.45,-116.499,0:388:0:387:13447:0:0,387	1/1:-891.74,-91.6619,0:311:1:308:10254:15	1/1:-955.021,-93.4044,0:319:1:315:11025:19:1,315	1/1:-467.768,-47.5627,0:158:0:158:5351:0	1/1:-1063.83,-106.866,0:358:0:355:12257:0	1/1:-733.936,-71.6451,0:238:0:238:8444:0	1/1:-636.364,-65.0225,0:218:0:216:7299:0	0/1:-281.74,0,-242.218:219:104:115:3983:3546	1/1:-749.99,-75.5585,0:252:0:251:8615:0	0/1:-202.21,0,-291.37:209:120:89:3063:4054	1/1:-405.179,-40.6391,0:135:0:135:4641:0	0/1:-253.473,0,-307.758:231:126:105:3702:4340
+chr14	23873021	.	C	T	4400.07	.	AB=0.463576;ABP=4.75035;AC=3;AF=0.5;AN=6;AO=70;CIGAR=1X;DP=1062;DPB=151;DPRA=0;EPP=10.9517;EPPR=35.8505;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=41.5556;NS=1;NUMALT=1;ODDS=379.226;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2516;QR=2960;RO=81;RPL=48;RPP=23.9805;RPPR=4.32391;RPR=22;RUN=1;SAF=33;SAP=3.50664;SAR=37;SF=24,25,29;SRF=33;SRP=9.04217;SRR=48;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-173.124,0,-211.068:151:81:70:2516:2960:81,70	0/1:-537.586,0,-526.39:420:208:211:7662:7508:208,211	.	.	.	0/1:-652.453,0,-583.232:491:233:254:9212:8468	.	.	.	.	.	.	.
+chr14	23873940	.	C	T	3663.41	.	AB=0.533333;ABP=5.61607;AC=1;AF=0.5;AN=2;AO=144;CIGAR=1X;DP=270;DPB=270;DPRA=0;EPP=7.89611;EPPR=24.2907;GTI=0;LEN=1;MEANALT=2;MQM=41.8681;MQMR=41.952;NS=1;NUMALT=1;ODDS=691.748;PAIRED=1;PAIREDR=0.992;PAO=0;PQA=0;PQR=0;PRO=0;QA=5299;QR=4508;RO=125;RPL=94;RPP=32.2045;RPPR=4.41741;RPR=50;RUN=1;SAF=79;SAP=5.96592;SAR=65;SF=18;SRF=65;SRP=3.44459;SRR=60;TYPE=snp	GT:GL:DP:RO:AO:QA:QR	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-377.205,0,-309.79:270:125:144:5299:4508	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr14	23874507	.	G	T	3636.12	.	AB=0.514085;ABP=3.49965;AC=9;AF=0.5;AN=18;AO=146;CIGAR=1X;DP=2914;DPB=284;DPRA=0;EPP=13.0645;EPPR=8.10854;GTI=0;LEN=1;MEANALT=1;MQM=37.9247;MQMR=38.942;NS=1;NUMALT=1;ODDS=748.075;PAIRED=1;PAIREDR=0.992754;PAO=0;PQA=0;PQR=0;PRO=0;QA=5545;QR=5152;RO=138;RPL=83;RPP=8.95954;RPPR=3.07324;RPR=63;RUN=1;SAF=49;SAP=37.2779;SAR=97;SF=0,9,11,15,17,19,26,27,29;SRF=52;SRP=21.2003;SRR=86;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	0/1:-354.034,0,-334.103:284:138:146:5545:5152:138,146	.	.	.	.	.	.	.	.	0/1:-252.071,0,-309.991:230:121:109:4011:4436:121,109	.	0/1:-398.627,0,-431.934:352:181:171:6122:6648	.	.	.	0/1:-333.483,0,-340.314:280:142:138:5153:5204	.	0/1:-419.477,0,-395.134:328:157:171:6401:5862	.	0/1:-314.185,0,-418.751:302:164:138:5008:6133	.	.	.	.	.	.	0/1:-398.468,0,-438.935:352:182:170:6086:6492	0/1:-419.633,0,-527.686:396:213:183:6777:7723:213,183	.	0/1:-474.384,0,-450.741:390:187:203:7311:6728	.	.	.	.	.	.	.
+chr14	23874523	.	C	T	3674.92	.	AB=0;ABP=0;AC=22;AF=1;AN=38;AO=288;CIGAR=1X;DP=5688;DPB=288;DPRA=0;EPP=13.8978;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=38.5799;MQMR=0;NS=1;NUMALT=1;ODDS=403.858;PAIRED=0.989583;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=10382;QR=0;RO=0;RPL=160;RPP=10.7311;RPPR=0;RPR=128;RUN=1;SAF=99;SAP=64.083;SAR=189;SF=0,1,4,8,9,11,12,13,15,16,17,19,20,26,27,28,29,33,34;SRF=0;SRP=0;SRR=0;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	1/1:-840.501,-86.6966,0:288:0:288:10382:0:0,288	1/1:-252.631,-29.5009,0:100:0:98:3461:0	.	.	0/1:-339.577,0,-572.373:389:229:160:5680:8186	.	.	.	0/1:-297.607,0,-301.588:250:124:126:4489:4430	0/1:-225.172,0,-323.33:242:134:108:3751:4580:134,108	.	0/1:-331.12,0,-439.741:342:188:152:5263:6686	0/1:-439.377,0,-386.697:355:162:193:6771:5866:162,193	0/1:-377.224,0,-371.117:318:153:164:5686:5498	.	1/1:-761.853,-75.8174,0:264:1:263:9358:38	0/1:-355.102,0,-295.536:282:124:157:5579:4489:124,157	0/1:-386.867,0,-378.027:321:155:165:5995:5590	.	0/1:-308.898,0,-447.386:324:181:142:4929:6522	0/1:-442.736,0,-449.092:383:190:193:7016:6720:190,193	.	.	.	.	.	0/1:-366.698,0,-367.214:332:164:166:5651:5542	0/1:-388.294,0,-512.718:402:215:186:6301:7554:215,186	0/1:-162.547,0,-211.316:213:109:103:3290:3728	0/1:-424.819,0,-454.99:399:198:198:6636:6734	.	.	.	0/1:-240.414,0,-361.843:248:142:106:3731:5066	0/1:-267.254,0,-288.086:236:116:120:4321:4205	.	.
+chr14	23874541	.	C	T	2370.15	.	AB=0.388889;ABP=26.1727;AC=7;AF=0.5;AN=12;AO=84;CIGAR=1X;DP=1171;DPB=216;DPRA=0;EPP=5.59539;EPPR=10.3204;GTI=0;LEN=1;MEANALT=2;MQM=38.2143;MQMR=41.1756;NS=1;NUMALT=1;ODDS=368.85;PAIRED=0.964286;PAIREDR=0.984733;PAO=0;PQA=0;PQR=0;PRO=0;QA=2980;QR=4574;RO=131;RPL=61;RPP=40.3389;RPPR=7.8008;RPR=23;RUN=1;SAF=26;SAP=29.4816;SAR=58;SF=2,11,23,24,28,35;SRF=50;SRP=18.94;SRR=81;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	0/1:-175.637,0,-331.109:216:131:84:2980:4574	.	.	.	.	.	.	.	.	0/1:-330.344,0,-307.188:286:138:146:5173:4825	.	.	.	.	.	.	.	.	.	.	.	0/1:-362.331,0,-216.649:248:96:152:5571:3401	0/1:-128.524,0,-171.708:126:68:58:2012:2442:68,58	.	.	.	0/1:-156.741,0,-145.537:173:87:85:3024:3043	.	.	.	.	.	.	1/1:-333.27,-36.7257,0:122:0:122:4140:0	.
+chr14	23876216	.	G	A	3701.63	.	AB=0.530612;ABP=4.20683;AC=3;AF=0.5;AN=6;AO=78;CIGAR=1X;DP=1039;DPB=147;DPRA=0;EPP=3.45573;EPPR=9.26925;GTI=0;LEN=1;MEANALT=2;MQM=41.7692;MQMR=42;NS=1;NUMALT=1;ODDS=356.718;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2618;QR=2408;RO=68;RPL=15;RPP=67.1523;RPPR=35.7101;RPR=63;RUN=1;SAF=52;SAP=21.8297;SAR=26;SF=24,25,29;SRF=45;SRP=18.4661;SRR=23;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-183.732,0,-165.863:147:68:78:2618:2408:68,78	0/1:-483.977,0,-614.365:463:252:208:7128:8646:252,208	.	.	.	0/1:-506.029,0,-498.111:429:214:214:7291:7248	.	.	.	.	.	.	.
+chr14	23876267	.	C	T	5306.24	.	AB=0.5;ABP=3.0103;AC=7;AF=0.5;AN=12;AO=227;CIGAR=1X;DP=2284;DPB=454;DPRA=0;EPP=8.98902;EPPR=12.2032;GTI=0;LEN=1;MEANALT=1;MQM=41.6211;MQMR=41.7489;NS=1;NUMALT=1;ODDS=1259.78;PAIRED=0.977974;PAIREDR=0.995595;PAO=0;PQA=0;PQR=0;PRO=0;QA=8075;QR=8071;RO=227;RPL=73;RPP=65.7725;RPPR=59.7269;RPR=154;RUN=1;SAF=122;SAP=5.77486;SAR=105;SF=2,11,23,24,28,35;SRF=131;SRP=14.7286;SRR=96;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	0/1:-562.261,0,-562.219:454:227:227:8075:8071	.	.	.	.	.	.	.	.	0/1:-605.636,0,-707.551:533:278:253:8817:10001	.	.	.	.	.	.	.	.	.	.	.	0/1:-519.963,0,-713.229:478:266:212:7646:9895	0/1:-311.029,0,-302.68:238:115:123:4398:4335:115,123	.	.	.	0/1:-457.847,0,-338.47:324:143:180:6397:5022	.	.	.	.	.	.	1/1:-808.84,-74.3229,0:257:1:255:9348:30	.
+chr14	23882144	.	T	C	2271.56	.	AB=0;ABP=0;AC=32;AF=1;AN=48;AO=149;CIGAR=1X;DP=3228;DPB=149;DPRA=0;EPP=3.37464;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=41.9866;MQMR=0;NS=1;NUMALT=1;ODDS=211.163;PAIRED=0.993289;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=5430;QR=0;RO=0;RPL=125;RPP=151.676;RPPR=0;RPR=24;RUN=1;SAF=48;SAP=43.9477;SAR=101;SF=0,1,2,4,8,9,11,12,13,15,16,17,19,20,24,25,26,28,29,30,32,33,34,35;SRF=0;SRP=0;SRR=0;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	1/1:-472.662,-44.8535,0:149:0:149:5430:0:0,149	1/1:-179.965,-17.1587,0:57:0:57:2058:0	0/1:-185.705,0,-157.412:137:63:74:2598:2290	.	0/1:-237.998,0,-177.351:166:71:95:3302:2624	.	.	.	0/1:-97.7029,0,-170.248:103:63:40:1489:2344	0/1:-120.531,0,-138.617:100:52:48:1725:1947:52,48	.	1/1:-666.591,-65.6245,0:219:0:218:7638:0	0/1:-307.825,0,-165.476:191:71:119:4202:2564:71,119	0/1:-195.65,0,-162.378:145:65:79:2743:2373	.	1/1:-399.342,-38.8329,0:130:0:129:4605:0	1/1:-371.709,-35.8226,0:119:0:119:4276:0:0,119	0/1:-151.599,0,-238.497:155:88:67:2271:3297	.	0/1:-267.208,0,-77.43:142:39:102:3552:1382	0/1:-178.183,0,-292.196:181:106:73:2688:4000:106,73	.	.	.	1/1:-244.713,-23.7814,0:79:0:79:2803:0:0,79	0/1:-209.888,0,-317.273:209:120:88:3138:4406:120,88	0/1:-206.25,0,-154.698:149:64:83:2896:2291	.	1/1:-282.903,-28.2968,0:94:0:94:3246:0	0/1:-232.202,0,-211.987:181:86:95:3291:3069	0/1:-116.29,0,-189.437:119:71:48:1741:2591	.	0/1:-191.386,0,-102.658:119:43:74:2597:1592	0/1:-178.821,0,-131.045:121:51:70:2465:1932	0/1:-153.313,0,-82.5041:91:34:57:2069:1266	1/1:-215.124,-18.0935,0:72:1:71:2506:37	.
+chr14	23883184	.	C	T	3862.87	.	AB=0.468531;ABP=5.47029;AC=13;AF=0.5;AN=24;AO=134;CIGAR=1X;DP=3655;DPB=286;DPRA=0;EPP=3.07512;EPPR=10.0169;GTI=0;LEN=1;MEANALT=2;MQM=41.8582;MQMR=42;NS=1;NUMALT=1;ODDS=731.924;PAIRED=1;PAIREDR=0.993333;PAO=0;PQA=0;PQR=0;PRO=0;QA=4753;QR=5376;RO=150;RPL=60;RPP=6.18648;RPPR=14.3599;RPR=74;RUN=1;SAF=80;SAP=13.9649;SAR=54;SF=0,1,4,8,12,13,15,16,20,28,33,34;SRF=93;SRP=21.7718;SRR=57;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	0/1:-326.295,0,-382.09:286:150:134:4753:5376:150,134	1/1:-402.437,-40.338,0:134:0:134:4625:0	.	.	0/1:-435.314,0,-474.414:367:190:176:6290:6724	.	.	.	0/1:-382.733,0,-293.279:282:124:155:5381:4330	.	.	.	0/1:-540.532,0,-546.065:433:217:215:7742:7788:217,215	0/1:-409.093,0,-484.215:361:190:171:5986:6828	.	0/1:-401.965,0,-465.753:355:186:168:5894:6603	0/1:-424.77,0,-395.327:328:157:171:6057:5691:157,171	.	.	.	0/1:-459.36,0,-460.184:371:184:184:6599:6589:184,184	.	.	.	.	.	.	.	0/1:-271.119,0,-248.77:229:106:121:3913:3638	.	.	.	.	0/1:-351.881,0,-273.628:257:116:139:4944:4024	0/1:-330.022,0,-281.758:252:115:137:4669:4116	.	.
+chr14	23884353	.	C	T	3921.61	.	AB=0.503526;ABP=3.08687;AC=1;AF=0.5;AN=2;AO=357;CIGAR=1X;DP=709;DPB=709;DPRA=0;EPP=44.913;EPPR=54.5345;GTI=0;LEN=1;MEANALT=2;MQM=22.3361;MQMR=32.106;NS=1;NUMALT=1;ODDS=902.983;PAIRED=0.994398;PAIREDR=0.997135;PAO=0;PQA=0;PQR=0;PRO=0;QA=11937;QR=12579;RO=349;RPL=218;RPP=40.9715;RPPR=15.6098;RPR=139;RUN=1;SAF=173;SAP=3.74629;SAR=184;SF=2;SRF=164;SRP=5.75419;SRR=185;TYPE=snp	GT:GL:DP:RO:AO:QA:QR	.	.	0/1:-407.934,0,-701.697:709:349:357:11937:12579	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr14	23884476	.	C	T	4009.95	.	AB=0.494505;ABP=3.12961;AC=1;AF=0.5;AN=2;AO=225;CIGAR=1X;DP=455;DPB=455;DPRA=0;EPP=4.64132;EPPR=3.61984;GTI=0;LEN=1;MEANALT=3;MQM=32.0311;MQMR=35.9868;NS=1;NUMALT=1;ODDS=923.326;PAIRED=1;PAIREDR=0.995614;PAO=0;PQA=0;PQR=0;PRO=0;QA=8227;QR=8444;RO=228;RPL=169;RPP=126.244;RPPR=114.098;RPR=56;RUN=1;SAF=104;SAP=5.79944;SAR=121;SF=17;SRF=90;SRP=24.9536;SRR=138;TYPE=snp	GT:GL:DP:RO:AO:QA:QR	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-421.529,0,-513.975:455:228:225:8227:8444	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr14	23884889	.	C	T	8251.25	.	AB=0.497494;ABP=3.05384;AC=10;AF=0.5;AN=16;AO=397;CIGAR=1X;DP=5736;DPB=798;DPRA=0;EPP=65.6329;EPPR=36.9756;GTI=0;LEN=1;MEANALT=3;MQM=31.9018;MQMR=34.7243;NS=1;NUMALT=1;ODDS=1701.95;PAIRED=0.989924;PAIREDR=0.994987;PAO=0;PQA=0;PQR=0;PRO=0;QA=14622;QR=14442;RO=399;RPL=186;RPP=6.42886;RPPR=4.23481;RPR=211;RUN=1;SAF=215;SAP=8.96681;SAR=182;SF=2,11,16,24,25,28,29,35;SRF=220;SRP=12.1588;SRR=179;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	0/1:-754.152,0,-853.427:798:399:397:14622:14442	.	.	.	.	.	.	.	.	0/1:-799.974,0,-990.721:879:446:430:15923:16260	.	.	.	.	0/1:-688.546,0,-705.471:692:325:366:13538:12246:325,366	.	.	.	.	.	.	.	1/1:-1009.52,-121.405,0:411:1:409:15305:39:1,409	0/1:-1032.9,0,-1100.86:1081:516:564:20728:18662:516,564	.	.	0/1:-347.53,0,-467.07:445:221:223:8194:8069	0/1:-1004.53,0,-1022.81:981:475:500:18223:17168	.	.	.	.	.	1/1:-1099.17,-129.411,0:449:2:447:16710:69	.
+chr14	23886226	.	G	A	4138.19	.	AB=0.546075;ABP=8.41304;AC=1;AF=0.5;AN=2;AO=160;CIGAR=1X;DP=293;DPB=293;DPRA=0;EPP=6.48466;EPPR=4.98585;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=41.7143;NS=1;NUMALT=1;ODDS=735.019;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=5943;QR=4895;RO=133;RPL=106;RPP=39.7082;RPPR=80.7425;RPR=54;RUN=1;SAF=76;SAP=3.87889;SAR=84;SF=10;SRF=58;SRP=7.72876;SRR=75;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	0/1:-425.438,0,-335.332:293:133:160:5943:4895:133,160	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr14	23886383	.	G	A	645.55	.	AB=0.245098;ABP=60.5756;AC=2;AF=0.5;AN=4;AO=25;CIGAR=1X;DP=221;DPB=102;DPRA=0;EPP=3.09716;EPPR=3.0385;GTI=0;LEN=1;MEANALT=1;MQM=36.96;MQMR=39.9351;NS=1;NUMALT=1;ODDS=57.5773;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=847;QR=2760;RO=77;RPL=11;RPP=3.79203;RPPR=6.42261;RPR=14;RUN=1;SAF=15;SAP=5.18177;SAR=10;SF=21,22;SRF=36;SRP=3.71532;SRR=41;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-36.778,0,-201.48:102:77:25:847:2760:77,25	0/1:-111.749,0,-169.211:119:67:52:1812:2406	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr14	23888685	.	G	A	6540.41	.	AB=0.516068;ABP=4.19661;AC=1;AF=0.5;AN=2;AO=273;CIGAR=1X;DP=529;DPB=529;DPRA=0;EPP=3.08189;EPPR=8.33254;GTI=0;LEN=1;MEANALT=2;MQM=40.7619;MQMR=41.1647;NS=1;NUMALT=1;ODDS=1412.58;PAIRED=0.981685;PAIREDR=0.988235;PAO=0;PQA=0;PQR=0;PRO=0;QA=9733;QR=9186;RO=255;RPL=73;RPP=131.302;RPPR=53.4992;RPR=200;RUN=1;SAF=163;SAP=25.3534;SAR=110;SF=25;SRF=151;SRP=21.8212;SRR=104;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-677.115,0,-628.497:529:255:273:9733:9186:255,273	.	.	.	.	.	.	.	.	.	.	.
+chr14	23889445	.	TGGTC	TGGGTC	514.97	.	AB=0.245399;ABP=94.785;AC=6;AF=0.5;AN=12;AO=40;CIGAR=1M1I4M;DP=1156;DPB=171;DPRA=0;EPP=16.9077;EPPR=3.08268;GTI=0;LEN=1;MEANALT=3;MQM=29.25;MQMR=20.5417;NS=1;NUMALT=1;ODDS=56.5329;PAIRED=1;PAIREDR=0.991667;PAO=0;PQA=0;PQR=0;PRO=0;QA=1072;QR=4392;RO=120;RPL=25;RPP=8.43898;RPPR=124.685;RPR=15;RUN=1;SAF=23;SAP=4.96463;SAR=17;SF=0,9,11,15,17,26;SRF=54;SRP=5.61607;SRR=66;TYPE=ins	GT:GL:DP:RO:AO:QA:QR:AD	0/1:-41.6042,0,-149.033:163:120:40:1072:4392:120,40	.	.	.	.	.	.	.	.	0/1:-38.5421,0,-136.412:146:105:36:954:3836:105,36	.	0/1:.,.,-233.442:265:167:94:2604:6013	.	.	.	0/1:.,.,-193.002:192:147:40:1071:5302	.	0/1:.,.,-172.788:182:127:53:1392:4712	.	.	.	.	.	.	.	.	0/1:.,.,-191.266:208:144:62:1836:5026	.	.	.	.	.	.	.	.	.	.
+chr14	23891481	.	C	T	4555.48	.	AB=0.5;ABP=3.0103;AC=1;AF=0.5;AN=2;AO=213;CIGAR=1X;DP=426;DPB=426;DPRA=0;EPP=3.83607;EPPR=5.01789;GTI=0;LEN=1;MEANALT=2;MQM=37.77;MQMR=40.816;NS=1;NUMALT=1;ODDS=1048.94;PAIRED=0.985915;PAIREDR=0.990566;PAO=0;PQA=0;PQR=0;PRO=0;QA=7487;QR=7548;RO=212;RPL=146;RPP=66.6355;RPPR=47.6279;RPR=67;RUN=1;SAF=97;SAP=6.69059;SAR=116;SF=11;SRF=102;SRP=3.66584;SRR=110;TYPE=snp	GT:GL:DP:RO:AO:QA:QR	.	.	.	.	.	.	.	.	.	.	.	0/1:-469.683,0,-517.968:426:212:213:7487:7548	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr14	23892888	.	A	G	4396.90	.	AB=0;ABP=0;AC=28;AF=1;AN=42;AO=265;CIGAR=1X;DP=5602;DPB=267;DPRA=0;EPP=4.0018;EPPR=3.0103;GTI=0;LEN=1;MEANALT=1;MQM=37.6377;MQMR=42;NS=1;NUMALT=1;ODDS=350.902;PAIRED=0.992453;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=9850;QR=77;RO=2;RPL=135;RPP=3.21516;RPPR=7.35324;RPR=130;RUN=1;SAF=127;SAP=4.0018;SAR=138;SF=0,1,2,4,8,9,11,13,15,16,17,19,20,24,26,28,30,32,33,34,35;SRF=1;SRP=3.0103;SRR=1;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	1/1:-776.189,-73.3659,0:267:2:265:9850:77:2,265	1/1:-273.863,-28.2968,0:94:0:94:3502:0	0/1:-349.123,0,-298.85:288:125:161:5875:4594	.	0/1:-317.192,0,-473.204:319:176:143:5282:6696	.	.	.	0/1:-240.87,0,-280.182:214:107:106:3921:4076	0/1:-253.892,0,-303.296:234:118:116:4234:4410:118,116	.	1/1:-1051.23,-106.003,0:359:1:356:12928:17	.	0/1:-464.697,0,-481.039:386:189:197:7199:7099	.	1/1:-865.927,-90.309,0:300:0:300:11062:0	1/1:-868.256,-91.8142,0:306:0:305:11090:0:0,305	0/1:-430.633,0,-422.394:351:166:185:6851:6238	.	0/1:-369.868,0,-379.928:310:149:161:5961:5632	0/1:-400.565,0,-433:346:170:176:6344:6383:170,176	.	.	.	0/1:-169.038,0,-135.147:122:54:68:2552:2028:54,68	.	0/1:-434.572,0,-369.36:345:154:191:6774:5600	.	1/1:-616.863,-62.7276,0:220:1:219:7806:38	.	0/1:-241.528,0,-342.348:240:132:108:3997:4954	.	0/1:-307.744,0,-376.944:275:141:134:4910:5388	0/1:-282.1,0,-342.784:254:131:123:4493:4926	0/1:-261.773,0,-274.284:225:108:117:4265:4128	1/1:-412.635,-44.2514,0:147:0:147:5287:0	.
+chr14	23895233	.	C	T	3862.35	.	AB=0.549145;ABP=12.8283;AC=1;AF=0.5;AN=2;AO=257;CIGAR=1X;DP=468;DPB=468;DPRA=0;EPP=30.4621;EPPR=18.8132;GTI=0;LEN=1;MEANALT=2;MQM=26.9689;MQMR=33.177;NS=1;NUMALT=1;ODDS=889.339;PAIRED=1;PAIREDR=0.995215;PAO=0;PQA=0;PQR=0;PRO=0;QA=9215;QR=7323;RO=209;RPL=155;RPP=26.7444;RPPR=27.9563;RPR=102;RUN=1;SAF=112;SAP=12.2116;SAR=145;SF=27;SRF=87;SRP=15.7378;SRR=122;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-399.805,0,-407.054:468:209:257:9215:7323:209,257	.	.	.	.	.	.	.	.	.
+chr14	23898507	.	G	A	5987.73	.	AB=0.473098;ABP=6.39844;AC=1;AF=0.5;AN=2;AO=255;CIGAR=1X;DP=539;DPB=539;DPRA=0;EPP=8.33254;EPPR=3.28556;GTI=0;LEN=1;MEANALT=1;MQM=39.4471;MQMR=41.3204;NS=1;NUMALT=1;ODDS=1378.73;PAIRED=0.988235;PAIREDR=0.996479;PAO=0;PQA=0;PQR=0;PRO=0;QA=9348;QR=10565;RO=284;RPL=129;RPP=3.08694;RPPR=5.48761;RPR=126;RUN=1;SAF=113;SAP=10.1719;SAR=142;SF=20;SRF=130;SRP=7.41441;SRR=154;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-607.734,0,-745.008:539:284:255:9348:10565:284,255	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr14	23898994	.	G	A	2001.55	.	AB=0.430939;ABP=10.5085;AC=7;AF=0.5;AN=12;AO=78;CIGAR=1X;DP=967;DPB=181;DPRA=0;EPP=3.12166;EPPR=3.03269;GTI=0;LEN=1;MEANALT=3;MQM=40.2308;MQMR=41.2062;NS=1;NUMALT=1;ODDS=370.882;PAIRED=0.948718;PAIREDR=0.989691;PAO=0;PQA=0;PQR=0;PRO=0;QA=2703;QR=3207;RO=97;RPL=14;RPP=72.6088;RPPR=11.0918;RPR=64;RUN=1;SAF=40;SAP=3.12166;SAR=38;SF=2,11,16,24,28,35;SRF=51;SRP=3.56996;SRR=46;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	0/1:-175.322,0,-224.626:181:97:78:2703:3207	.	.	.	.	.	.	.	.	0/1:-304.502,0,-276.968:265:124:130:4560:4146	.	.	.	.	0/1:-175.337,0,-209.98:174:91:79:2745:3071:91,79	.	.	.	.	.	.	.	0/1:-87.0619,0,-101.176:80:41:37:1289:1462:41,37	.	.	.	0/1:-159.265,0,-160.574:139:71:68:2313:2313	.	.	.	.	.	.	1/1:-362.299,-36.7257,0:128:0:122:4195:0	.
+chr14	23899027	.	C	T	2716.69	.	AB=0.541436;ABP=5.70964;AC=12;AF=0.5;AN=22;AO=98;CIGAR=1X;DP=2453;DPB=181;DPRA=0;EPP=6.20103;EPPR=16.8502;GTI=0;LEN=1;MEANALT=1;MQM=38.7959;MQMR=41.1807;NS=1;NUMALT=1;ODDS=473.06;PAIRED=1;PAIREDR=0.975904;PAO=0;PQA=0;PQR=0;PRO=0;QA=3617;QR=3169;RO=83;RPL=42;RPP=7.35324;RPPR=16.8502;RPR=56;RUN=1;SAF=49;SAP=3.0103;SAR=49;SF=0,1,4,8,13,15,16,20,28,33,34;SRF=44;SRP=3.66436;SRR=39;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	0/1:-239.464,0,-214.955:181:83:98:3617:3169:83,98	1/1:-210.393,-18.4727,0:68:1:67:2479:20	.	.	0/1:-371.503,0,-422.483:313:162:151:5616:6079	.	.	.	0/1:-230.371,0,-239.984:184:93:91:3415:3505	.	.	.	.	0/1:-350.285,0,-401.831:305:156:148:5386:5806	.	0/1:-318.724,0,-428.086:295:166:129:4904:6213	0/1:-274.339,0,-298.095:225:117:108:4026:4363:117,108	.	.	.	0/1:-313.827,0,-398.569:279:149:130:4863:5669:149,130	.	.	.	.	.	.	.	0/1:-220.135,0,-198.345:164:78:86:3125:2863	.	.	.	.	0/1:-259.536,0,-288.103:209:108:101:3801:4077	0/1:-283.654,0,-313.672:230:119:111:4160:4440	.	.
+chr14	23899060	.	G	A	3653.45	.	AB=0.479452;ABP=3.81345;AC=7;AF=0.5;AN=14;AO=105;CIGAR=1X;DP=2074;DPB=219;DPRA=0;EPP=4.02365;EPPR=4.22937;GTI=0;LEN=1;MEANALT=1;MQM=41.3714;MQMR=39.5877;NS=1;NUMALT=1;ODDS=609.498;PAIRED=0.980952;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3944;QR=4033;RO=114;RPL=57;RPP=4.68544;RPPR=3.08649;RPR=48;RUN=1;SAF=55;SAP=3.52732;SAR=50;SF=0,9,11,15,17,19,26;SRF=59;SRP=3.31507;SRR=55;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	0/1:-271.697,0,-273.308:219:114:105:3944:4033:114,105	.	.	.	.	.	.	.	.	0/1:-282.821,0,-239.683:209:98:111:4084:3493:98,111	.	0/1:-477.495,0,-365.334:353:164:188:6775:5547	.	.	.	0/1:-456.784,0,-383.736:341:157:182:6581:5702	.	0/1:-405.47,0,-380.672:316:153:163:5849:5555	.	0/1:-335.799,0,-440.019:307:172:134:5019:6154	.	.	.	.	.	.	0/1:-385.099,0,-391.812:329:165:160:5619:5646	.	.	.	.	.	.	.	.	.	.
+chr14	23899793	.	G	A	4482.42	.	AB=0.464692;ABP=7.7638;AC=6;AF=0.5;AN=12;AO=204;CIGAR=1X;DP=2303;DPB=439;DPRA=0;EPP=13.9102;EPPR=10.2857;GTI=0;LEN=1;MEANALT=2;MQM=41.8039;MQMR=41.8462;NS=1;NUMALT=1;ODDS=1142.83;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=7423;QR=8524;RO=234;RPL=74;RPP=36.3914;RPPR=65.4077;RPR=130;RUN=1;SAF=112;SAP=7.26809;SAR=92;SF=4,10,17,23,30,31;SRF=131;SRP=10.2857;SRR=103;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	0/1:-508.827,0,-607.099:439:234:204:7423:8524	.	.	.	.	.	0/1:-468.942,0,-503.56:376:196:178:6732:7098:196,178	.	.	.	.	.	.	0/1:-543.139,0,-742.63:498:280:216:8031:10299	.	.	.	.	.	0/1:-559.713,0,-650.714:467:252:215:8105:9123	.	.	.	.	.	.	0/1:-393.246,0,-389.4:302:151:151:5596:5527	0/1:-283.376,0,-269.388:221:109:111:4033:3856	.	.	.	.	.
+chr14	23900093	.	C	T	1844.42	.	AB=0.5;ABP=3.0103;AC=2;AF=0.5;AN=4;AO=71;CIGAR=1X;DP=323;DPB=142;DPRA=0;EPP=3.28556;EPPR=9.89173;GTI=0;LEN=1;MEANALT=1;MQM=41.9718;MQMR=42;NS=1;NUMALT=1;ODDS=408.265;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2628;QR=2636;RO=71;RPL=36;RPP=3.04088;RPPR=4.50892;RPR=35;RUN=1;SAF=46;SAP=16.4979;SAR=25;SF=30,32;SRF=44;SRP=11.8491;SRR=27;TYPE=snp	GT:GL:DP:RO:AO:QA:QR	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-184.938,0,-186.012:142:71:71:2628:2636	.	0/1:-200.317,0,-268.858:181:100:81:2942:3728	.	.	.	.
+chr14	23900794	.	G	A	6744.91	.	AB=0.522976;ABP=5.10575;AC=14;AF=0.5;AN=24;AO=239;CIGAR=1X;DP=5307;DPB=457;DPRA=0;EPP=6.29022;EPPR=8.74777;GTI=0;LEN=1;MEANALT=1;MQM=40.3096;MQMR=41.4312;NS=1;NUMALT=1;ODDS=1264.86;PAIRED=0.991632;PAIREDR=0.995413;PAO=0;PQA=0;PQR=0;PRO=0;QA=8844;QR=8088;RO=218;RPL=110;RPP=6.29022;RPPR=4.00639;RPR=129;RUN=1;SAF=93;SAP=28.5319;SAR=146;SF=0,2,9,11,15,16,17,19,24,26,28,35;SRF=93;SRP=13.2102;SRR=125;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	0/1:-605.835,0,-558.454:457:218:239:8844:8088:218,239	.	0/1:-740.321,0,-577.414:516:234:282:10540:8489	.	.	.	.	.	.	0/1:-597.054,0,-633.035:477:244:232:8694:8968:244,232	.	1/1:-1792.01,-173.995,0:579:0:578:21010:0	.	.	.	0/1:-587.203,0,-591.069:469:231:238:8688:8484	0/1:-588.144,0,-602.23:464:231:233:8632:8623:231,233	0/1:-743.671,0,-781.367:600:303:297:11022:11219	.	0/1:-559.275,0,-584.853:453:227:226:8383:8324	.	.	.	.	0/1:-272.633,0,-292.914:218:111:107:3997:4147:111,107	.	0/1:-689.34,0,-642.1:540:262:277:10099:9303	.	0/1:-408.997,0,-411.184:328:162:165:5960:5874	.	.	.	.	.	.	1/1:-628.931,-54.9316,0:206:2:203:7476:77	.
+chr14	23901012	.	T	C	3067.73	.	AB=0.48062;ABP=3.85196;AC=1;AF=0.5;AN=2;AO=124;CIGAR=1X;DP=258;DPB=258;DPRA=0;EPP=3.08035;EPPR=3.26958;GTI=0;LEN=1;MEANALT=1;MQM=41.9677;MQMR=42;NS=1;NUMALT=1;ODDS=706.371;PAIRED=0.991935;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=4530;QR=5027;RO=134;RPL=48;RPP=16.7396;RPPR=3.59368;RPR=76;RUN=1;SAF=51;SAP=11.486;SAR=73;SF=18;SRF=53;SRP=15.715;SRR=81;TYPE=snp	GT:GL:DP:RO:AO:QA:QR	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-315.824,0,-356.646:258:134:124:4530:5027	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr14	23901996	.	C	T	1531.27	.	AB=0.527559;ABP=3.84811;AC=1;AF=0.5;AN=2;AO=67;CIGAR=1X;DP=127;DPB=127;DPRA=0;EPP=3.30199;EPPR=3.0471;GTI=0;LEN=1;MEANALT=2;MQM=37.7164;MQMR=41.2034;NS=1;NUMALT=1;ODDS=312.683;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2489;QR=2098;RO=59;RPL=43;RPP=14.7103;RPPR=5.99147;RPR=24;RUN=1;SAF=35;SAP=3.30199;SAR=32;SF=4;SRF=26;SRP=4.81373;SRR=33;TYPE=snp	GT:GL:DP:RO:AO:QA:QR	.	.	.	.	0/1:-160.649,0,-142.487:127:59:67:2489:2098	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr14	23902753	.	G	A	7510.16	.	AB=0.580488;ABP=26.0809;AC=35;AF=0.5;AN=56;AO=238;CIGAR=1X;DP=11468;DPB=410;DPRA=0;EPP=6.65983;EPPR=7.59452;GTI=0;LEN=1;MEANALT=2;MQM=41.9034;MQMR=41.9766;NS=1;NUMALT=1;ODDS=903.122;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=8911;QR=6173;RO=171;RPL=75;RPP=73.6653;RPPR=47.2144;RPR=163;RUN=1;SAF=170;SAP=97.9347;SAR=68;SF=0,1,2,3,6,8,9,11,13,15,16,17,18,19,20,21,23,24,25,26,27,28,29,32,33,34,35,36;SRF=122;SRP=70.6815;SRR=49;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	0/1:-646.44,0,-413.546:410:171:238:8911:6173:171,238	0/1:-246.975,0,-200.162:169:78:91:3448:2887	0/1:-707.938,0,-508.927:473:207:266:9844:7488	0/1:-601.534,0,-438.341:403:176:227:8420:6450:176,227	.	.	0/1:-475.934,0,-371.6:326:150:176:6644:5390:150,176	.	0/1:-543.643,0,-388.508:361:157:204:7544:5716	1/1:-1271.46,-118.004,0:392:0:392:14728:0:0,392	.	1/1:-1762.36,-162.778,0:557:2:555:20435:53	.	0/1:-843.219,0,-605.488:556:244:310:11715:8888	.	0/1:-725.013,0,-370.931:422:158:264:9922:5723	0/1:-546.821,0,-519.167:407:202:205:7754:7378:202,205	0/1:-841.268,0,-513.05:522:212:309:11586:7735	1/1:-955.914,-87.7055,0:296:1:295:11084:14	0/1:-620.074,0,-435.919:405:177:228:8591:6437	0/1:-743.271,0,-550.709:499:225:274:10365:8082:225,274	0/1:-123.682,0,-379.154:198:141:56:2116:5046:141,56	.	0/1:-683.168,0,-435.468:424:176:248:9395:6504	1/1:-726.2,-67.4307,0:224:0:224:8403:0:0,224	0/1:-963.696,0,-690.246:639:282:357:13401:10141:282,357	0/1:-660.655,0,-573.426:491:235:256:9412:8314	0/1:-726.194,0,-680.75:554:271:282:10360:9745:271,282	0/1:-446.098,0,-394.028:335:158:177:6345:5696	1/1:-2187.89,-199.018,0:695:3:691:25503:112	.	.	0/1:-565.181,0,-351.018:352:144:207:7778:5248	0/1:-499.26,0,-384.359:339:154:184:6965:5582	1/1:-1146.46,-107.167,0:357:0:356:13322:0	1/1:-732.63,-68.0328,0:226:0:226:8488:0	0/1:-702.872,0,-428.642:436:177:259:9642:6471
+chr14	73664718	.	T	C	1070.14	.	AB=0.468354;ABP=4.38465;AC=7;AF=0.5;AN=14;AO=74;CIGAR=1X;DP=684;DPB=158;DPRA=0;EPP=5.94472;EPPR=3.42391;GTI=0;LEN=1;MEANALT=1;MQM=40.8649;MQMR=41.0714;NS=1;NUMALT=1;ODDS=407.769;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2808;QR=3219;RO=84;RPL=13;RPP=70.6194;RPPR=15.5221;RPR=61;RUN=1;SAF=35;SAP=3.47981;SAR=39;SF=12,14,18,19,20,21,24;SRF=43;SRP=3.1137;SRR=41;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-191.088,0,-225.088:158:84:74:2808:3219:84,74	.	0/1:-119.666,0,-96.6495:83:38:45:1696:1437	.	.	.	0/1:-68.9578,0,-103.224:65:37:28:1069:1420	0/1:-99.3736,0,-153.338:100:56:41:1558:2137	0/1:-186.261,0,-143.389:125:56:69:2635:2119:56,69	0/1:-73.3368,0,-158.333:89:58:31:1154:2142:58,31	.	.	0/1:-70.5765,0,-94.1492:64:35:29:1078:1311:35,29	.	.	.	.	.	.	.	.	.	.	.	.
+chr14	73664853	.	G	T	3258.02	.	AB=0;ABP=0;AC=42;AF=1;AN=56;AO=139;CIGAR=1X;DP=4224;DPB=139;DPRA=0;EPP=8.64988;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=41.7626;MQMR=0;NS=1;NUMALT=1;ODDS=197.3;PAIRED=0.985612;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=5269;QR=0;RO=0;RPL=88;RPP=24.397;RPPR=0;RPR=51;RUN=1;SAF=69;SAP=3.02592;SAR=70;SF=0,1,2,4,5,6,7,8,9,11,13,14,15,16,19,20,21,22,23,24,27,28,29,30,31,34,35,36;SRF=0;SRP=0;SRR=0;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	1/1:-453.197,-41.8432,0:139:0:139:5269:0:0,139	0/1:-51.6397,0,-114.703:64:42:22:817:1547	0/1:-132.871,0,-196.071:127:73:54:2008:2712	.	0/1:-207.562,0,-185.102:149:71:78:2938:2674	1/1:-493.228,-42.635,0:154:1:153:5795:39:1,153	1/1:-503.944,-46.3586,0:154:0:154:5870:0:0,154	0/1:-224.303,0,-266.049:187:98:89:3258:3738	1/1:-445.598,-41.8432,0:140:0:139:5212:0	1/1:-305.21,-28.2968,0:94:0:94:3546:0:0,94	.	1/1:-853.146,-80.375,0:268:0:267:9916:0	.	1/1:-657.477,-58.2733,0:210:2:208:7743:54	0/1:-152.454,0,-219.612:138:79:59:2247:3042	1/1:-406.335,-37.6288,0:126:0:125:4742:0	0/1:-222.341,0,-197.541:163:76:86:3158:2897:76,86	.	.	0/1:-173.488,0,-181.399:139:72:67:2494:2595	0/1:-208.183,0,-278.781:185:104:81:3057:3885:104,81	0/1:-235.566,0,-61.2242:118:32:86:3159:1111:32,86	1/1:-377.758,-36.4246,0:122:0:121:4387:0	1/1:-604.633,-55.3895,0:184:0:184:7026:0	0/1:-95.5184,0,-101.403:80:41:39:1442:1465:41,39	.	.	0/1:-292.286,0,-283.513:224:109:115:4205:4084:109,115	1/1:-386.529,-37.3277,0:124:0:124:4500:0	0/1:-221.154,0,-352.638:226:131:95:3461:4910	0/1:-142.849,0,-220.619:139:81:58:2149:3067	0/1:-126.235,0,-235.41:138:85:52:1953:3203	.	.	1/1:-543.126,-50.573,0:168:0:168:6303:0	1/1:-300.553,-28.2968,0:94:0:94:3536:0	1/1:-536.517,-51.1751,0:170:0:170:6315:0
+chr14	73673178	.	A	G	2684.85	.	AB=0.4689;ABP=4.76618;AC=2;AF=0.5;AN=4;AO=98;CIGAR=1X;DP=432;DPB=209;DPRA=0;EPP=4.4284;EPPR=5.3774;GTI=0;LEN=1;MEANALT=1;MQM=41.6327;MQMR=41.8378;NS=1;NUMALT=1;ODDS=575.453;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3725;QR=4108;RO=111;RPL=60;RPP=13.7347;RPPR=29.7918;RPR=38;RUN=1;SAF=43;SAP=6.20103;SAR=55;SF=5,36;SRF=47;SRP=8.66395;SRR=64;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	0/1:-258.162,0,-290.666:209:111:98:3725:4108:111,98	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-296.226,0,-281.124:223:110:113:4205:4025
+chr14	73673219	.	G	A	2063.58	.	AB=0.413146;ABP=16.9669;AC=1;AF=0.5;AN=2;AO=88;CIGAR=1X;DP=213;DPB=213;DPRA=0;EPP=14.9534;EPPR=3.16665;GTI=0;LEN=1;MEANALT=1;MQM=41.7159;MQMR=41.856;NS=1;NUMALT=1;ODDS=475.158;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3302;QR=4735;RO=125;RPL=59;RPP=25.2185;RPPR=111.428;RPR=29;RUN=1;SAF=26;SAP=34.9902;SAR=62;SF=20;SRF=38;SRP=44.7199;SRR=87;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-220.919,0,-345.185:213:125:88:3302:4735:125,88	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr14	76425702	.	T	G	13.63	.	AB=0.4;ABP=3.44459;AC=1;AF=0.5;AN=2;AO=2;CIGAR=1X;DP=5;DPB=5;DPRA=0;EPP=3.0103;EPPR=3.73412;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=42;NS=1;NUMALT=1;ODDS=3.09338;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=71;QR=116;RO=3;RPL=2;RPP=7.35324;RPPR=3.73412;RPR=0;RUN=1;SAF=1;SAP=3.0103;SAR=1;SF=3;SRF=0;SRP=9.52472;SRR=3;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	0/1:-5.05271,0,-8.85639:5:3:2:71:116:3,2	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr14	76432050	.	G	C	2330.19	.	AB=0.487047;ABP=3.29158;AC=1;AF=0.5;AN=2;AO=94;CIGAR=1X;DP=193;DPB=193;DPRA=0;EPP=8.9241;EPPR=6.71716;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=42;NS=1;NUMALT=1;ODDS=536.546;PAIRED=1;PAIREDR=0.989899;PAO=0;PQA=0;PQR=0;PRO=0;QA=3505;QR=3756;RO=99;RPL=68;RPP=43.7601;RPPR=16.7191;RPR=26;RUN=1;SAF=37;SAP=12.2506;SAR=57;SF=35;SRF=43;SRP=6.71716;SRR=56;TYPE=snp	GT:GL:DP:RO:AO:QA:QR	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-245.23,0,-266.349:193:99:94:3505:3756	.
+chr14	90863489	.	G	A	542.86	.	AB=0;ABP=0;AC=62;AF=1;AN=74;AO=26;CIGAR=1X;DP=1028;DPB=26;DPRA=0;EPP=15.0369;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=0;NS=1;NUMALT=1;ODDS=40.6488;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=949;QR=0;RO=0;RPL=0;RPP=59.4686;RPPR=0;RPR=26;RUN=1;SAF=19;SAP=15.0369;SAR=7;SF=0,1,2,3,4,5,6,7,8,9,10,11,12,13,14,15,16,17,18,19,20,21,22,23,24,25,26,27,28,29,30,31,32,33,34,35,36;SRF=0;SRP=0;SRR=0;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	1/1:-82.6617,-7.82678,0:26:0:26:949:0:0,26	0/1:-15.7023,0,-24.8125:15:9:6:230:333	1/1:-92.8361,-9.63296,0:32:0:32:1078:0	0/1:-36.5563,0,-44.1539:32:17:15:527:612:17,15	1/1:-118.527,-11.1381,0:37:0:37:1367:0	1/1:-118.033,-11.7402,0:39:0:39:1365:0:0,39	0/1:-22.5808,0,-15.363:14:6:8:306:221:6,8	1/1:-59.8992,-6.0206,0:20:0:20:689:0	1/1:-100.583,-10.5361,0:36:0:35:1153:0	0/1:-8.59583,0,-35.1873:17:13:4:155:457:13,4	1/1:-80.3938,-7.52575,0:25:0:25:940:0:0,25	1/1:-86.3208,-8.72987,0:30:0:29:991:0	0/1:-56.3398,0,-43.3766:40:17:23:784:634:17,23	0/1:-60.3436,0,-55.2756:47:24:23:854:789	0/1:-19.4895,0,-24.3449:17:9:8:280:335	1/1:-126.06,-11.7402,0:39:0:39:1455:0	1/1:-105.484,-9.93399,0:33:0:33:1215:0:0,33	0/1:-71.2496,0,-75.1728:56:29:27:1013:1052	1/1:-26.5552,-2.40824,0:8:0:8:303:0	1/1:-94.9663,-9.33193,0:31:0:31:1092:0	1/1:-79.92,-7.82678,0:26:0:26:918:0:0,26	1/1:-33.3547,-0.276228,0:12:1:11:421:34:1,11	1/1:-54.6552,-5.11751,0:17:0:17:629:0	1/1:-82.9527,-7.52575,0:25:0:25:957:0	1/1:-48.596,-4.51545,0:15:0:15:556:0:0,15	1/1:-197.204,-18.6639,0:62:0:62:2284:0:0,62	0/1:-52.0415,0,-34.9477:35:15:20:719:517	1/1:-114.435,-11.1381,0:37:0:37:1318:0:0,37	1/1:-53.6109,-5.11751,0:17:0:17:616:0	0/1:-42.2437,0,-45.8194:37:19:18:611:650	1/1:-80.6865,-7.82678,0:26:0:26:926:0	1/1:-79.0199,-7.52575,0:25:0:25:908:0	1/1:-47.5887,-4.51545,0:15:0:15:546:0	1/1:-68.3474,-6.32163,0:21:0:21:786:0	0/1:-32.5579,0,-32.1473:26:13:13:461:455	1/1:-26.2631,-2.70927,0:9:0:9:300:0	0/1:-32.144,0,-38.5003:29:16:13:481:538
+chr14	90863643	.	TTTTGTTTGT	TTTTGT	1887.95	.	AB=0.583942;ABP=11.395;AC=1;AF=0.5;AN=2;AO=80;CIGAR=1M4D5M;DP=137;DPB=107;DPRA=0;EPP=5.72464;EPPR=10.6105;GTI=0;LEN=4;MEANALT=2;MQM=41.075;MQMR=42;NS=1;NUMALT=1;ODDS=302.592;PAIRED=0;PAIREDR=0;PAO=2;PQA=60.5;PQR=95.5;PRO=3;QA=2798;QR=2071;RO=56;RPL=34;RPP=6.91895;RPPR=5.49198;RPR=46;RUN=1;SAF=51;SAP=16.1477;SAR=29;SF=28;SRF=29;SRP=3.16541;SRR=27;TYPE=del	GT:GL:DP:RO:AO:QA:QR	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-198.002,0,-139.434:137:56:80:2798:2071	.	.	.	.	.	.	.	.
+chr14	90866346	.	C	T	1218.89	.	AB=0;ABP=0;AC=41;AF=1;AN=62;AO=90;CIGAR=1X;DP=2181;DPB=90;DPRA=0;EPP=63.329;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=41.8;MQMR=0;NS=1;NUMALT=1;ODDS=129.372;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=3347;QR=0;RO=0;RPL=24;RPP=45.5712;RPPR=0;RPR=66;RUN=1;SAF=44;SAP=3.10681;SAR=46;SF=0,1,4,5,7,8,9,10,11,12,13,14,15,16,17,18,19,20,21,22,23,24,25,26,27,28,29,30,32,33,35;SRF=0;SRP=0;SRR=0;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	1/1:-288.406,-27.0927,0:90:0:90:3347:0:0,90	0/1:-43.678,0,-46.083:33:17:16:618:644	.	.	1/1:-229.978,-21.0721,0:70:0:70:2665:0	0/1:-92.6165,0,-101.001:74:38:36:1325:1422:38,36	.	0/1:-101.653,0,-88.8937:72:34:38:1440:1276	0/1:-61.0358,0,-100.766:61:37:24:915:1384	0/1:-62.668,0,-95.4191:61:36:25:934:1314:36,25	1/1:-201.643,-18.6639,0:62:0:62:2332:0:0,62	0/1:-132.181,0,-129.892:100:50:50:1875:1862	0/1:-151.037,0,-98.1955:94:38:56:2085:1463:38,56	0/1:-125.25,0,-135.845:98:51:47:1792:1907	0/1:-56.6712,0,-91.9717:55:33:22:845:1252	1/1:-236.602,-22.5773,0:75:0:75:2759:0	1/1:-208.307,-18.9649,0:63:0:63:2410:0:0,63	0/1:-105.529,0,-87.832:72:33:39:1480:1265	0/1:-81.7341,0,-71.4826:59:27:32:1146:1029	1/1:-213.506,-20.169,0:67:0:67:2468:0	1/1:-215.646,-20.47,0:69:0:68:2508:0:0,68	0/1:-116.06,0,-21.4524:52:11:41:1519:427:11,41	1/1:-196.016,-18.3628,0:61:0:61:2265:0	0/1:-75.8238,0,-104.846:67:38:29:1108:1443	1/1:-119.069,-11.1381,0:37:0:37:1373:0:0,37	0/1:-186,0,-164.034:135:64:70:2633:2372:64,70	0/1:-112.527,0,-136.021:95:51:44:1627:1900	0/1:-134.083,0,-136.454:104:52:52:1910:1936:52,52	0/1:-58.8777,0,-101.246:62:38:24:893:1383	0/1:-181.457,0,-92.2727:111:39:70:2513:1443	0/1:-46.1895,0,-72.1595:45:26:19:686:988	.	0/1:-95.3338,0,-38.2552:49:16:33:1274:610	1/1:-143.271,-13.2453,0:45:0:44:1657:0	.	0/1:-49.9052,0,-66.758:43:24:19:723:919	.
+chr15	35083508	.	TCACACACACACACACACACACACACACACACACACACACACACACAT	TCACACACACACACACACACACACACACAT,TCACACACACACACACACACACACACACACACACACACACACACAT,TCACACACACACACACACACACACACACACACACACACACACACACACAT,TCACACACACACACACACACACACACACACACACACAT,TCACACACACACACACACACACACACACACACACACACACACAT,TCACACACACACACACACACACACACACACAT	425.19	.	AB=0.516129,0.215054;ABP=3.22044,68.5981;AC=6,2,3,1,3,1;AF=0.5,0.5;AN=20;AO=48,20;CIGAR=1M16D31M,1M2D45M;DP=795;DPB=72.4792;DPRA=0,0;EPP=3.19126,3.0103;EPPR=0;GTI=0;LEN=16,2;MEANALT=16,16;MQM=23.0833,42;MQMR=0;NS=1;NUMALT=2;ODDS=3.9372;PAIRED=1,1;PAIREDR=0;PAO=3.25,3.58333;PQA=71.75,78.4167;PQR=78.4167;PRO=3.58333;QA=931,545;QR=0;RO=0;RPL=31,13;RPP=11.8771,6.91895;RPPR=0;RPR=17,7;RUN=1,1;SAF=22,7;SAP=3.73412,6.91895;SAR=26,13;SF=0,3,6,9,10,12,16,21,24,25;SRF=0;SRP=0;SRR=0;TYPE=del,del	GT:GL:DP:RO:AO:QA:QR:AD	6/2:-86.9783,.,.,-61.3116,.,-38.7344,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,-42.2486,.,0,.,.,.,-10.2819:93:0:.,20,.,.,.,48:.,545,.,.,.,931:0:0,48,20	.	.	2/3:-51.9265,.,.,-24.0651,.,-22.3346,-24.1642,.,0,-23.0361,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.:78:6:.,24,22,.,.,.:.,554,550,.,.,.:222:6,24,22	.	.	1/1:-55.0258,-27.4606,0,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.:81:0:38,.,.,.,.,.:711,.,.,.,.,.:0:0,38	.	.	5/5:-103.126,.,.,.,.,.,.,.,.,.,.,.,.,.,.,-19.2759,.,.,.,.,0,.,.,.,.,.,.,.:65:0:.,.,.,.,43,.:.,.,.,.,1199,.:0:0,43	0/4:-30.1105,.,.,.,.,.,.,.,.,.,0,.,.,.,-44.6163,.,.,.,.,.,.,.,.,.,.,.,.,.:105:24:.,.,.,29,.,.:.,.,.,689,.,.:856:24,29	.	0/5:-33.3556,.,.,.,.,.,.,.,.,.,.,.,.,.,.,0,.,.,.,.,-19.0759,.,.,.,.,.,.,.:104:18:.,.,.,.,30,.:.,.,.,.,756,.:625:18,30	.	.	.	1/1:-80.8549,-27.7003,0,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.:95:0:82,.,.,.,.,.:1092,.,.,.,.,.:0:0,82	.	.	.	.	0/1:-9.45557,0,-15.9271,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.:38:9:13,.,.,.,.,.:251,.,.,.,.,.:307:9,13	.	.	3/3:-13.6166,.,.,.,.,.,-4.51545,.,.,0,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.:18:0:.,.,6,.,.,.:.,.,154,.,.,.:0:0,6	0/1:-31.5305,0,-8.10667,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.:118:13:49,.,.,.,.,.:795,.,.,.,.,.:461:13,49	.	.	.	.	.	.	.	.	.	.	.
+chr15	35084392	.	G	A	5656.72	.	AB=0.523148;ABP=5.02092;AC=1;AF=0.5;AN=2;AO=226;CIGAR=1X;DP=432;DPB=432;DPRA=0;EPP=35.3326;EPPR=13.9102;GTI=0;LEN=1;MEANALT=2;MQM=40.5575;MQMR=40.4363;NS=1;NUMALT=1;ODDS=1096.09;PAIRED=1;PAIREDR=0.990196;PAO=0;PQA=0;PQR=0;PRO=0;QA=8397;QR=7311;RO=204;RPL=137;RPP=25.1478;RPPR=21.7871;RPR=89;RUN=1;SAF=133;SAP=18.3836;SAR=93;SF=18;SRF=135;SRP=49.3776;SRR=69;TYPE=snp	GT:GL:DP:RO:AO:QA:QR	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-580.171,0,-491.112:432:204:226:8397:7311	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr15	63351840	.	C	A	4681.66	.	AB=0;ABP=0;AC=38;AF=1;AN=60;AO=225;CIGAR=1X;DP=7654;DPB=225;DPRA=0;EPP=16.2225;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=41.9822;MQMR=0;NS=1;NUMALT=1;ODDS=316.521;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=8492;QR=0;RO=0;RPL=136;RPP=24.3293;RPPR=0;RPR=89;RUN=1;SAF=84;SAP=34.3664;SAR=141;SF=0,1,2,3,4,5,7,8,9,10,12,13,15,16,20,21,22,23,24,25,26,27,28,29,31,32,33,34,35,36;SRF=0;SRP=0;SRR=0;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	1/1:-734.473,-67.7318,0:225:0:225:8492:0:0,225	0/1:-162.752,0,-118.565:106:47:59:2248:1734	0/1:-322.307,0,-358.431:264:136:128:4664:5067	0/1:-315.747,0,-329.786:250:128:121:4518:4684:128,121	0/1:-302.044,0,-462.917:294:173:121:4511:6395	0/1:-413.16,0,-393.236:307:151:156:5863:5611:151,156	.	1/1:-1090.8,-102.952,0:343:0:342:12616:0	0/1:-255.986,0,-281.572:207:107:99:3670:3965	0/1:-237.122,0,-247.181:186:94:92:3426:3499:94,92	1/1:-647.329,-59.905,0:199:0:199:7495:0:0,199	.	1/1:-1254.6,-113.551,0:388:1:387:14533:33:1,387	0/1:-422.504,0,-498.587:359:192:165:6120:7010	.	1/1:-916.94,-86.6966,0:288:0:288:10632:0	0/1:-333.348,0,-329.378:251:126:125:4729:4677:126,125	.	.	.	0/1:-422.611,0,-421.233:319:160:159:5994:5974:160,159	0/1:-300.667,0,-75.8933:147:38:109:3975:1390:38,109	0/1:-189.846,0,-215.8:157:83:74:2734:3024	0/1:-322.375,0,-423.692:283:157:125:4708:5876	0/1:-152.724,0,-143.87:114:54:59:2152:2054:54,59	1/1:-1413.62,-133.958,0:445:0:445:16340:0:0,445	0/1:-379.225,0,-400.558:307:155:152:5435:5721	0/1:-510.368,0,-369.057:345:151:194:7092:5465:151,194	0/1:-239.251,0,-245.42:185:93:92:3403:3472	1/1:-1128.97,-107.468,0:357:0:357:13045:0	.	0/1:-287.674,0,-230.505:200:91:109:4013:3351	0/1:-326.908,0,-401.374:279:151:128:4743:5599	1/1:-641.515,-59.6039,0:198:0:198:7408:0	0/1:-264.392,0,-434.018:268:159:109:4001:5939	0/1:-173.677,0,-166.11:128:63:65:2450:2360	0/1:-304.064,0,-364.262:255:138:117:4399:5103
+chr15	63351873	.	T	C	1835.44	.	AB=0.41791;ABP=6.93191;AC=11;AF=0.5;AN=22;AO=28;CIGAR=1X;DP=1617;DPB=67;DPRA=0;EPP=3.32051;EPPR=5.73856;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=42;NS=1;NUMALT=1;ODDS=143.94;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1063;QR=1495;RO=39;RPL=17;RPP=5.80219;RPPR=9.74743;RPR=11;RUN=1;SAF=4;SAP=34.0313;SAR=24;SF=1,2,3,5,6,20,21,22,23,30,32;SRF=10;SRP=23.1103;SRR=29;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	0/1:-71.9834,0,-109.191:67:39:28:1063:1495	0/1:-244.389,0,-226.335:179:87:92:3454:3252	0/1:-210.083,0,-176.042:148:68:80:2945:2546:68,80	.	0/1:-300.817,0,-255.618:209:97:112:4221:3693:97,112	0/1:-147.378,0,-164.59:118:63:55:2118:2306:63,55	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-266.946,0,-290.731:210:109:101:3820:4093:109,101	0/1:-49.4899,0,-201.718:96:71:25:899:2661:71,25	0/1:-144.241,0,-128.936:105:50:55:2027:1848	0/1:-264.198,0,-212.365:181:82:98:3688:3080	.	.	.	.	.	.	0/1:-180.558,0,-169.707:129:63:66:2541:2413	.	0/1:-287.482,0,-171.116:175:69:105:3932:2584	.	.	.	.
+chr15	63354009	.	G	C	1384.01	.	AB=0.377049;ABP=19.0294;AC=2;AF=0.5;AN=4;AO=46;CIGAR=1X;DP=296;DPB=122;DPRA=0;EPP=7.73089;EPPR=12.2676;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=40.9868;NS=1;NUMALT=1;ODDS=223.899;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1681;QR=2650;RO=76;RPL=37;RPP=40.0197;RPPR=86.3263;RPR=9;RUN=1;SAF=17;SAP=9.80795;SAR=29;SF=8,26;SRF=30;SRP=10.3247;SRR=46;TYPE=snp	GT:GL:DP:RO:AO:QA:QR	.	.	.	.	.	.	.	.	0/1:-109.792,0,-192.005:122:76:46:1681:2650	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-193.434,0,-228.688:174:92:81:2817:3222	.	.	.	.	.	.	.	.	.	.
+chr15	63358032	.	CTTTTTTTTTTTTTTCTCATTGTG	CTTTTTTTTTTTTTCTCATTGTG	1410.55	.	AB=0.139706;ABP=156.355;AC=7;AF=0.5;AN=14;AO=19;CIGAR=1M1D22M;DP=1563;DPB=136;DPRA=0;EPP=22.325;EPPR=12.5178;GTI=0;LEN=1;MEANALT=16;MQM=40.8421;MQMR=41.973;NS=1;NUMALT=1;ODDS=23.196;PAIRED=0.894737;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=613;QR=2586;RO=74;RPL=9;RPP=3.12459;RPPR=29.4201;RPR=10;RUN=1;SAF=12;SAP=5.8675;SAR=7;SF=0,6,8,12,24,25,26;SRF=42;SRP=5.94472;SRR=32;TYPE=del	GT:GL:DP:RO:AO:QA:QR:AD	0/1:-25.1156,0,-199.133:136:74:19:613:2586:74,19	.	.	.	.	.	0/1:-21.792,0,-146.652:103:57:14:499:1968:57,14	.	0/1:.,.,-146.999:146:60:50:1551:2140	.	.	.	0/1:-241.427,0,-200.026:280:88:117:3507:3087:88,117	.	.	.	.	.	.	.	.	.	.	.	0/1:-66.4643,0,-55.0967:86:24:35:973:840:24,35	0/1:-361.783,0,-391.681:475:160:171:5326:5633:160,171	0/1:.,.,-339.938:337:139:138:4076:4859	.	.	.	.	.	.	.	.	.	.
+chr15	63362179	.	G	A	1112.71	.	AB=0.5;ABP=3.0103;AC=1;AF=0.5;AN=2;AO=47;CIGAR=1X;DP=94;DPB=94;DPRA=0;EPP=3.0565;EPPR=3.42611;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=42;NS=1;NUMALT=1;ODDS=256.212;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1728;QR=1768;RO=47;RPL=37;RPP=36.6912;RPPR=36.6912;RPR=10;RUN=1;SAF=17;SAP=10.8184;SAR=30;SF=35;SRF=23;SRP=3.0565;SRR=24;TYPE=snp	GT:GL:DP:RO:AO:QA:QR	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-121.443,0,-124.988:94:47:47:1728:1768	.
+chr15	63363401	.	CGT	CATTTTGTTTTGT,CATTTTGT	2089.70	.	AB=0;ABP=0;AC=31,22;AF=1;AN=74;AO=136;CIGAR=1M10I2M;DP=5865;DPB=613.333;DPRA=0;EPP=95.234;EPPR=0;GTI=0;LEN=10;MEANALT=4;MQM=29.6618;MQMR=0;NS=1;NUMALT=1;ODDS=193.141;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=3465;QR=0;RO=0;RPL=87;RPP=26.0662;RPPR=0;RPR=49;RUN=1;SAF=67;SAP=3.07417;SAR=69;SF=0,1,2,3,4,5,6,7,8,9,10,11,12,13,14,15,16,17,18,19,20,21,22,23,24,25,26,27,28,29,30,31,32,33,34,35,36;SRF=0;SRP=0;SRR=0;TYPE=ins	GT:GL:DP:RO:AO:QA:QR:AD	1/1:-289.586,-40.9401,0,.,.,.:150:0:136,.:3465,.:0:0,136	0/1:.,.,-48.222,.,.,.:41:21:18,.:652,.:773	0/1:.,.,-133.968,.,.,.:121:58:54,.:1770,.:2052	0/1:-118.635,0,-203.302,.,.,.:157:80:72,.:1973,.:2940:80,72	1/2:.,.,-140.255,.,0,-126.833:163:0:71,76:2476,2694:0	0/1:-154.419,0,-245.441,.,.,.:200:99:86,.:2162,.:3576:99,86	0/2:-148.334,.,.,0,.,-159.346:141:64:.,65:.,2188:2333:64,65	1/2:.,.,-189.322,.,0,-116.484:174:1:68,88:2385,3128:38	1/2:.,.,-167.419,.,0,-77.3834:137:0:47,77:1711,2790:0	0/1:-68.7096,0,-218.95,.,.,.:131:83:37,.:1231,.:3017:83,37	1/2:-255.44,-142.262,-125.705,-113.161,0,-94.7984:128:0:55,61:1531,1886:0:0,55,61	2/2:.,.,.,.,.,0:217:0:.,197:.,6632:0	2/2:-494.368,.,.,-55.3895,.,0:210:0:.,184:.,5827:0:0,184	1/2:.,.,-204.413,.,0,-185.117:224:0:105,97:3525,3399:0	0/2:.,.,.,.,.,-191.381:148:78:.,65:.,2345:2887	1/1:.,.,0,.,.,.:117:0:98,.:3330,.:0	1/2:-301.067,-198.77,-182.815,-102.271,0,-73.0715:168:0:53,97:1411,2733:0:0,53,97	2/2:.,.,.,.,.,0:185:0:.,159:.,5671:0	0/2:.,.,.,.,.,-156.365:144:64:.,76:.,2616:2333	0/2:.,.,.,.,.,-218.998:173:88:.,74:.,2608:3137	0/1:-98.7578,0,-285.956,.,.,.:187:111:68,.:1832,.:4040:111,68	0/1:-55.1508,0,-72.2533,.,.,.:76:34:35,.:900,.:1191:34,35	0/1:.,.,-189.612,.,.,.:156:77:67,.:2220,.:2695	0/1:.,.,-212.522,.,.,.:162:84:66,.:2441,.:3078	0/2:-74.9367,.,.,0,.,-97.7419:73:38:.,34:.,1024:1399:38,34	1/2:-547.341,-292.906,-256.782,-254.441,0,-218.92:258:0:120,118:3432,3850:0:0,120,118	1/2:.,.,-270.889,.,0,-141.077:243:0:93,130:2836,4286:0	0/1:-182.255,0,-300.44,.,.,.:242:118:115,.:3008,.:4283:118,115	0/1:.,.,-155.772,.,.,.:116:64:44,.:1350,.:2301	1/1:.,.,0,.,.,.:235:0:195,.:6158,.:0	0/2:.,.,.,.,.,-219.551:180:88:.,79:.,2749:3170	1/2:.,.,-150.327,.,0,-103.962:147:0:61,79:2035,2677:0	0/1:.,.,-276.601,.,.,.:176:105:57,.:1905,.:3799	1/1:.,.,0,.,.,.:82:0:79,.:2677,.:0	0/1:.,.,-201.947,.,.,.:151:79:61,.:2180,.:2871	0/2:.,.,.,.,.,-149.04:120:59:.,47:.,1717:2159	0/1:.,.,-168.826,.,.,.:132:67:55,.:1781,.:2465
+chr15	73614834	.	T	C	5645.41	.	AB=0;ABP=0;AC=68;AF=1;AN=74;AO=170;CIGAR=1X;DP=7415;DPB=170;DPRA=0;EPP=3.06139;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=41.6529;MQMR=0;NS=1;NUMALT=1;ODDS=240.275;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=6270;QR=0;RO=0;RPL=104;RPP=21.455;RPPR=0;RPR=66;RUN=1;SAF=92;SAP=5.51388;SAR=78;SF=0,1,2,3,4,5,6,7,8,9,10,11,12,13,14,15,16,17,18,19,20,21,22,23,24,25,26,27,28,29,30,31,32,33,34,35,36;SRF=0;SRP=0;SRR=0;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	1/1:-541.058,-51.1751,0:170:0:170:6270:0:0,170	1/1:-228.883,-21.3731,0:71:0:71:2634:0	1/1:-793.716,-75.5585,0:253:0:251:9184:0	1/1:-642.301,-59.6039,0:198:0:198:7430:0:0,198	1/1:-736.397,-70.441,0:234:0:234:8524:0	1/1:-838.966,-80.074,0:266:0:266:9710:0:0,266	1/1:-524.9,-49.67,0:165:0:165:6113:0:0,165	1/1:-889.228,-84.8905,0:283:0:282:10310:0	1/1:-499.104,-47.2617,0:157:0:157:5753:0	1/1:-549.985,-53.2823,0:177:0:177:6357:0:0,177	1/1:-716.234,-67.7318,0:225:0:225:8269:0:0,225	1/1:-667.299,-62.9153,0:209:0:209:7721:0	1/1:-785.137,-74.9565,0:250:0:249:9136:0:0,249	1/1:-729.094,-69.839,0:232:0:232:8430:0	1/1:-522.279,-48.7669,0:162:0:162:6024:0	1/1:-796.425,-76.7627,0:256:0:255:9241:0	1/1:-646.625,-61.4101,0:205:0:204:7474:0:0,204	1/1:-813.382,-76.7627,0:255:0:255:9400:0	1/1:-435.438,-40.338,0:134:0:134:5020:0	1/1:-814.869,-76.4616,0:254:0:254:9401:0	1/1:-732.075,-69.5379,0:232:0:231:8458:0:0,231	1/1:-316.067,-30.7051,0:102:0:102:3648:0:0,102	1/1:-345.803,-33.1133,0:110:0:110:3980:0	1/1:-843.412,-80.074,0:266:0:266:9778:0	0/1:-201.094,0,-135.493:127:53:74:2761:2007:53,74	0/1:-374.667,0,-424.735:312:164:148:5412:6055:164,148	0/1:-299.597,0,-250.926:223:101:122:4224:3665	0/1:-316.792,0,-288.412:236:115:121:4473:4153:115,121	1/1:-437.977,-41.2411,0:137:0:137:5066:0	1/1:-858.279,-80.8854,0:275:1:274:9929:19	1/1:-553.18,-52.6803,0:175:0:175:6379:0	1/1:-460.535,-43.2566,0:150:1:149:5348:19	0/1:-251.334,0,-277.063:203:105:98:3598:3909	0/1:-208.123,0,-170.899:144:65:79:2897:2477	1/1:-646.207,-61.4101,0:204:0:204:7495:0	1/1:-472.278,-43.9504,0:146:0:146:5447:0	1/1:-691.192,-65.0225,0:217:0:216:7972:0
+chr15	73615097	.	T	C	311.06	.	AB=0.5;ABP=3.0103;AC=1;AF=0.5;AN=2;AO=20;CIGAR=1X;DP=40;DPB=40;DPRA=0;EPP=38.1882;EPPR=24.2907;GTI=0;LEN=1;MEANALT=1;MQM=41.1;MQMR=42;NS=1;NUMALT=1;ODDS=71.6255;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=704;QR=700;RO=20;RPL=19;RPP=38.1882;RPPR=24.2907;RPR=1;RUN=1;SAF=0;SAP=46.4397;SAR=20;SF=32;SRF=0;SRP=46.4397;SRR=20;TYPE=snp	GT:GL:DP:RO:AO:QA:QR	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-49.4681,0,-49.1415:40:20:20:704:700	.	.	.	.
+chr15	73615205	.	C	T	103.10	.	AB=0.615385;ABP=4.51363;AC=1;AF=0.5;AN=2;AO=8;CIGAR=1X;DP=13;DPB=13;DPRA=0;EPP=3.0103;EPPR=9.52472;GTI=0;LEN=1;MEANALT=2;MQM=36.75;MQMR=41.3333;NS=1;NUMALT=1;ODDS=1.0394;PAIRED=0.875;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=214;QR=87;RO=3;RPL=3;RPP=4.09604;RPPR=3.73412;RPR=5;RUN=1;SAF=3;SAP=4.09604;SAR=5;SF=29;SRF=1;SRP=3.73412;SRR=2;TYPE=snp	GT:GL:DP:RO:AO:QA:QR	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-14.7043,0,-4.39747:13:3:8:214:87	.	.	.	.	.	.	.
+chr15	73615786	.	G	C	2003.72	.	AB=0.511111;ABP=3.20332;AC=1;AF=0.5;AN=2;AO=92;CIGAR=1X;DP=180;DPB=180;DPRA=0;EPP=27.1797;EPPR=26.9963;GTI=0;LEN=1;MEANALT=2;MQM=41.9783;MQMR=41.954;NS=1;NUMALT=1;ODDS=461.375;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3050;QR=3113;RO=87;RPL=66;RPP=40.775;RPPR=24.0012;RPR=26;RUN=1;SAF=50;SAP=4.52089;SAR=42;SF=6;SRF=42;SRP=3.23494;SRR=45;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	0/1:-213.322,0,-217.669:180:87:92:3050:3113:87,92	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr15	73615878	.	C	T	1494.84	.	AB=0.48855;ABP=3.15949;AC=4;AF=0.5;AN=8;AO=64;CIGAR=1X;DP=569;DPB=131;DPRA=0;EPP=11.6962;EPPR=10.3026;GTI=0;LEN=1;MEANALT=1;MQM=41.1562;MQMR=42;NS=1;NUMALT=1;ODDS=343.706;PAIRED=0.953125;PAIREDR=0.985075;PAO=0;PQA=0;PQR=0;PRO=0;QA=2293;QR=2432;RO=67;RPL=41;RPP=14.0034;RPPR=14.7103;RPR=23;RUN=1;SAF=31;SAP=3.14602;SAR=33;SF=18,24,26,32;SRF=26;SRP=10.3026;SRR=41;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-157.425,0,-172.582:131:67:64:2293:2432	.	.	.	.	.	0/1:-110.05,0,-97.0406:82:38:44:1559:1400:38,44	.	0/1:-207.828,0,-316.913:216:126:89:3151:4410	.	.	.	.	.	0/1:-158.093,0,-192.051:140:75:65:2301:2690	.	.	.	.
+chr15	73615912	.	G	A	1418.27	.	AB=0.536;ABP=4.41741;AC=1;AF=0.5;AN=2;AO=67;CIGAR=1X;DP=125;DPB=125;DPRA=0;EPP=6.93191;EPPR=5.40641;GTI=0;LEN=1;MEANALT=1;MQM=41.2836;MQMR=41.6379;NS=1;NUMALT=1;ODDS=292.712;PAIRED=1;PAIREDR=0.948276;PAO=0;PQA=0;PQR=0;PRO=0;QA=2207;QR=2013;RO=58;RPL=53;RPP=52.306;RPPR=36.7056;RPR=14;RUN=1;SAF=28;SAP=6.93191;SAR=39;SF=15;SRF=29;SRP=3.0103;SRR=29;TYPE=snp	GT:GL:DP:RO:AO:QA:QR	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-154.094,0,-137.064:125:58:67:2207:2013	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr15	73617804	.	G	T	807.94	.	AB=0.527027;ABP=3.47981;AC=1;AF=0.5;AN=2;AO=39;CIGAR=1X;DP=74;DPB=74;DPRA=0;EPP=3.06598;EPPR=3.07234;GTI=0;LEN=1;MEANALT=1;MQM=41.8462;MQMR=42;NS=1;NUMALT=1;ODDS=168.557;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1287;QR=1190;RO=35;RPL=26;RPP=12.42;RPPR=20.9405;RPR=13;RUN=1;SAF=8;SAP=32.4644;SAR=31;SF=6;SRF=10;SRP=16.9698;SRR=25;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	0/1:-90.5575,0,-82.1224:74:35:39:1287:1190:35,39	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr15	73621946	.	G	A	3190.28	.	AB=0.51074;ABP=3.43008;AC=4;AF=0.5;AN=8;AO=214;CIGAR=1X;DP=1333;DPB=419;DPRA=0;EPP=7.06913;EPPR=9.14152;GTI=0;LEN=1;MEANALT=2;MQM=36.4907;MQMR=39.1225;NS=1;NUMALT=1;ODDS=1039.97;PAIRED=0.990654;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=7650;QR=7647;RO=204;RPL=67;RPP=67.9515;RPPR=81.7368;RPR=147;RUN=1;SAF=134;SAP=32.5991;SAR=80;SF=2,10,14,21;SRF=133;SRP=43.9277;SRR=71;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	0/1:-468.91,0,-510.361:419:204:214:7650:7647	.	.	.	.	.	.	.	0/1:-495.353,0,-625.6:457:243:213:7777:9164:243,213	.	.	.	0/1:-345.427,0,-434.913:316:168:148:5535:6326	.	.	.	.	.	.	0/1:-31.9392,0,-315.144:141:116:25:850:4227:116,25	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr15	73660505	.	C	T	1167.66	.	AB=0.455556;ABP=4.55446;AC=6;AF=0.5;AN=8;AO=41;CIGAR=1X;DP=250;DPB=90;DPRA=0;EPP=3.06326;EPPR=3.05462;GTI=0;LEN=1;MEANALT=1;MQM=41.9024;MQMR=42;NS=1;NUMALT=1;ODDS=210.904;PAIRED=0.97561;PAIREDR=0.979592;PAO=0;PQA=0;PQR=0;PRO=0;QA=1458;QR=1729;RO=49;RPL=9;RPP=31.0276;RPPR=70.4146;RPR=32;RUN=1;SAF=20;SAP=3.06326;SAR=21;SF=7,23,27,28;SRF=24;SRP=3.05462;SRR=25;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	0/1:-100.446,0,-123.907:90:49:41:1458:1729	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	1/1:-201.609,-19.2659,0:64:0:64:2314:0	.	.	.	0/1:-82.9839,0,-50.1429:57:24:33:1145:821:24,33	1/1:-116.671,-11.7402,0:39:0:39:1354:0	.	.	.	.	.	.	.	.
+chr17	8192202	.	C	G	407.33	.	AB=0.444444;ABP=4.21667;AC=1;AF=0.5;AN=2;AO=20;CIGAR=1X;DP=45;DPB=45;DPRA=0;EPP=4.74748;EPPR=3.09716;GTI=0;LEN=1;MEANALT=1;MQM=41.9;MQMR=42;NS=1;NUMALT=1;ODDS=93.7911;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=690;QR=914;RO=25;RPL=6;RPP=9.95901;RPPR=17.6895;RPR=14;RUN=1;SAF=12;SAP=4.74748;SAR=8;SF=30;SRF=18;SRP=13.5202;SRR=7;TYPE=snp	GT:GL:DP:RO:AO:QA:QR	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-47.0512,0,-66.3493:45:25:20:690:914	.	.	.	.	.	.
+chr17	8192377	.	G	T	1959.34	.	AB=0.46;ABP=5.78978;AC=1;AF=0.5;AN=2;AO=92;CIGAR=1X;DP=200;DPB=200;DPRA=0;EPP=10.6577;EPPR=25.1106;GTI=0;LEN=1;MEANALT=2;MQM=41.1739;MQMR=41.9626;NS=1;NUMALT=1;ODDS=451.154;PAIRED=0.956522;PAIREDR=0.962617;PAO=0;PQA=0;PQR=0;PRO=0;QA=3218;QR=3904;RO=107;RPL=81;RPP=118.665;RPPR=117.165;RPR=11;RUN=1;SAF=34;SAP=16.6056;SAR=58;SF=25;SRF=37;SRP=25.1106;SRR=70;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-217.675,0,-279.847:200:107:92:3218:3904:107,92	.	.	.	.	.	.	.	.	.	.	.
+chr17	8192922	.	C	T	2147.95	.	AB=0.474026;ABP=3.91273;AC=5;AF=0.5;AN=8;AO=73;CIGAR=1X;DP=506;DPB=154;DPRA=0;EPP=4.46786;EPPR=5.18177;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=41.5556;NS=1;NUMALT=1;ODDS=395.385;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2624;QR=2924;RO=81;RPL=48;RPP=18.746;RPPR=35.8505;RPR=25;RUN=1;SAF=23;SAP=24.6953;SAR=50;SF=12,13,14,20;SRF=28;SRP=19.7655;SRR=53;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-182.001,0,-207.636:154:81:73:2624:2924:81,73	0/1:-215.808,0,-146.262:145:59:85:3010:2179	0/1:-109.003,0,-91.4044:81:38:42:1531:1340	.	.	.	.	.	1/1:-394.342,-37.9298,0:126:0:126:4573:0:0,126	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr17	37822311	.	A	C	7548.14	.	AB=0;ABP=0;AC=56;AF=1;AN=70;AO=327;CIGAR=1X;DP=11710;DPB=328;DPRA=0;EPP=32.8199;EPPR=5.18177;GTI=0;LEN=1;MEANALT=1;MQM=41.8838;MQMR=42;NS=1;NUMALT=1;ODDS=448.535;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=11716;QR=31;RO=1;RPL=239;RPP=154.422;RPPR=5.18177;RPR=88;RUN=1;SAF=123;SAP=46.5792;SAR=204;SF=0,1,2,3,4,5,6,7,8,9,10,11,12,13,14,15,16,17,18,19,20,21,22,23,24,26,27,28,29,30,31,32,33,34,36;SRF=1;SRP=5.18177;SRR=0;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	1/1:-1014.59,-95.671,0:328:1:327:11716:31:1,327	1/1:-347.022,-33.4143,0:111:0:111:3993:0	1/1:-1097.56,-108.371,0:361:0:360:12662:0	0/1:-470.527,0,-330.064:315:135:180:6516:4917:135,180	0/1:-584.565,0,-598.81:464:234:230:8346:8500	1/1:-1321.05,-124.999,0:421:1:419:15264:16:1,419	1/1:-828.171,-80.074,0:266:0:266:9526:0:0,266	0/1:-638.765,0,-640.262:508:254:254:9151:9131	1/1:-907.455,-86.6966,0:288:0:288:10479:0	1/1:-1059.39,-101.146,0:336:0:336:12214:0:0,336	1/1:-1226.25,-115.362,0:393:2:391:14182:31:2,391	1/1:-1155.31,-116.198,0:386:0:386:13313:0	1/1:-1505.36,-144.249,0:485:1:483:17410:16:1,483	0/1:-434.56,0,-497.298:378:199:177:6309:7017	1/1:-847.009,-77.9789,0:279:2:276:9836:64	1/1:-1277.12,-125.53,0:417:0:417:14749:0	0/1:-473.261,0,-374.741:332:151:181:6618:5485:151,181	1/1:-1329.87,-127.938,0:426:0:425:15361:0	1/1:-573.323,-55.6906,0:185:0:185:6642:0	1/1:-1239.95,-119.114,0:401:1:400:14363:16	1/1:-1298.31,-125.228,0:416:0:416:15021:0:0,416	1/1:-366.022,-34.0482,0:126:2:124:4241:41:2,124	1/1:-372.282,-35.6274,0:123:1:122:4293:14	0/1:-564.179,0,-606.067:454:233:221:8082:8554	0/1:-148.797,0,-142.735:115:56:59:2107:2038:56,59	.	0/1:-452.217,0,-469.51:399:197:198:6648:6802	1/1:-1245.75,-122.09,0:412:1:410:14360:18:1,410	1/1:-609.393,-59.6039,0:198:0:198:7018:0	1/1:-1726.2,-170.985,0:569:0:568:19961:0	0/1:-335.591,0,-378.065:284:148:136:4844:5328	0/1:-228.349,0,-216.397:182:88:94:3250:3111	0/1:-417.369,0,-506.639:369:199:169:6085:7110	0/1:-328.198,0,-418.116:296:163:132:4805:5830	0/1:-373.716,0,-413.96:314:165:149:5393:5908	.	0/1:-538.321,0,-390.563:373:164:208:7510:5795
+chr17	39912145	.	T	A	2732.90	.	AB=0.367816;ABP=16.2139;AC=61;AF=0.5;AN=72;AO=32;CIGAR=1X;DP=3967;DPB=87;DPRA=0;EPP=7.35324;EPPR=3.36563;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=42;NS=1;NUMALT=1;ODDS=148.458;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1179;QR=2051;RO=55;RPL=28;RPP=42.0968;RPPR=57.0602;RPR=4;RUN=1;SAF=16;SAP=3.0103;SAR=16;SF=0,1,2,3,4,5,6,7,8,9,10,11,12,13,14,15,16,17,18,19,20,21,22,23,24,25,26,27,29,30,31,32,33,34,35,36;SRF=22;SRP=7.78754;SRR=33;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	0/1:-76.0745,0,-151.509:87:55:32:1179:2051:55,32	1/1:-96.6763,-9.0309,0:30:0:30:1120:0	1/1:-337.52,-33.1133,0:110:0:110:3956:0	1/1:-405.976,-37.9298,0:127:0:126:4699:0:0,126	1/1:-576.917,-53.2823,0:178:0:177:6697:0	0/1:-187.913,0,-210.114:152:79:73:2711:2959:79,73	1/1:-294.651,-27.0927,0:90:0:90:3411:0:0,90	1/1:-520.876,-48.7669,0:162:0:162:6063:0	1/1:-340.263,-31.9092,0:106:0:106:3951:0	1/1:-299.565,-27.9958,0:94:0:93:3470:0:0,93	1/1:-393.625,-37.0267,0:123:0:123:4591:0:0,123	0/1:-182.875,0,-112.835:118:47:71:2519:1742	1/1:-509.622,-47.5627,0:158:0:158:5900:0:0,158	0/1:-171.018,0,-162.411:131:64:67:2428:2333	1/1:-260.662,-24.0824,0:80:0:80:3014:0	1/1:-393.978,-38.5318,0:129:0:128:4585:0	0/1:-142.738,0,-153.301:113:59:54:2048:2172:59,54	1/1:-394.595,-35.6298,0:124:1:123:4621:17	1/1:-255.697,-24.9855,0:83:0:83:2981:0	0/1:-166.527,0,-147.952:119:56:63:2337:2127	1/1:-454.623,-42.4452,0:141:0:141:5294:0:0,141	0/1:-88.2417,0,-32.597:46:14:32:1176:534:14,32	1/1:-151.911,-14.4494,0:48:0:48:1751:0	0/1:-134.955,0,-234.179:139:84:55:2044:3194	1/1:-230.948,-21.0721,0:70:0:70:2671:0:0,70	0/1:-207.496,0,-232.861:168:89:79:2986:3278:89,79	1/1:-391.319,-39.4349,0:131:0:131:4527:0	1/1:-434.289,-40.6391,0:135:0:135:5026:0:0,135	.	1/1:-529.065,-50.573,0:168:0:168:6156:0	1/1:-315.126,-29.5009,0:98:0:98:3635:0	0/1:-84.5607,0,-67.0675:60:28:32:1181:978	1/1:-389.945,-36.1236,0:120:0:120:4515:0	0/1:-88.2119,0,-132.644:85:48:37:1350:1832	1/1:-265.294,-24.9855,0:83:0:83:3077:0	1/1:-175.787,-16.5567,0:55:0:55:2027:0	1/1:-335.745,-31.6082,0:106:0:105:3935:0
+chr17	39913645	.	T	C	5007.04	.	AB=0.491228;ABP=3.16268;AC=61;AF=0.5;AN=72;AO=112;CIGAR=1X;DP=7331;DPB=228;DPRA=0;EPP=4.25114;EPPR=6.67934;GTI=0;LEN=1;MEANALT=1;MQM=41.9464;MQMR=42;NS=1;NUMALT=1;ODDS=604.207;PAIRED=0.991071;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=4128;QR=4367;RO=116;RPL=9;RPP=174.324;RPPR=154.639;RPR=103;RUN=1;SAF=65;SAP=9.29206;SAR=47;SF=0,1,2,3,4,5,6,7,8,9,10,11,12,13,14,15,16,17,18,19,20,21,22,23,24,25,26,27,29,30,31,32,33,34,35,36;SRF=72;SRP=17.6865;SRR=44;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	0/1:-289.667,0,-309.53:228:116:112:4128:4367:116,112	0/1:-72.4616,0,-121.809:73:44:29:1085:1660	1/1:-611.073,-59.0019,0:197:0:196:7073:0	1/1:-606.914,-57.1957,0:190:0:190:6997:0:0,190	1/1:-890.394,-83.9874,0:279:0:279:10274:0	0/1:-290.438,0,-294.22:223:112:111:4125:4178:112,111	1/1:-405.021,-38.8329,0:131:0:129:4692:0:0,129	1/1:-922.627,-87.5997,0:291:0:291:10711:0	1/1:-606.93,-55.8804,0:198:1:197:7056:39	1/1:-600.865,-56.8947,0:189:0:189:6955:0:0,189	1/1:-580.484,-54.4864,0:182:0:181:6714:0:0,181	0/1:-344.453,0,-245.096:231:98:132:4765:3628	0/1:-306.539,0,-376.342:265:143:121:4449:5279:143,121	0/1:-250.982,0,-283.37:215:111:104:3651:4015	1/1:-583.665,-55.9916,0:186:0:186:6734:0	1/1:-679.312,-64.7215,0:216:0:215:7861:0	0/1:-262.613,0,-310.284:223:118:105:3867:4404:118,105	1/1:-693.395,-65.6245,0:218:0:218:8011:0	1/1:-439.174,-41.8432,0:140:0:139:5064:0	0/1:-271.396,0,-284.947:215:108:107:3873:4035	1/1:-794.434,-75.5585,0:251:0:251:9167:0:0,251	0/1:-219.41,0,-65.7632:111:31:80:2910:1139:31,80	1/1:-386.637,-38.2308,0:128:0:127:4464:0	1/1:-620.615,-58.3998,0:194:0:194:7160:0	1/1:-314.075,-30.404,0:101:0:101:3609:0:0,101	1/1:-988.133,-95.4265,0:318:0:317:11389:0:0,317	1/1:-785.905,-73.375,0:258:1:254:9098:39	1/1:-861.426,-73.2473,0:281:4:276:10059:125:4,276	.	1/1:-915.96,-88.1665,0:298:1:296:10586:14	1/1:-613.475,-57.7978,0:192:0:192:7071:0	0/1:-161.155,0,-182.711:135:70:65:2328:2573	1/1:-709.9,-66.8287,0:223:0:222:8187:0	0/1:-236.951,0,-259.496:189:99:90:3389:3652	1/1:-644.177,-60.8081,0:202:0:202:7431:0	1/1:-474.977,-44.8535,0:149:0:149:5473:0	1/1:-665.358,-61.6299,0:211:1:208:7702:15
+chr17	39913995	.	G	A	807.48	.	AB=0.514706;ABP=3.13803;AC=1;AF=0.5;AN=2;AO=35;CIGAR=1X;DP=68;DPB=68;DPRA=0;EPP=8.03571;EPPR=3.0761;GTI=0;LEN=1;MEANALT=1;MQM=41.4286;MQMR=41.8788;NS=1;NUMALT=1;ODDS=175.574;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1259;QR=1208;RO=33;RPL=20;RPP=4.56135;RPPR=10.9724;RPR=15;RUN=1;SAF=9;SAP=20.9405;SAR=26;SF=3;SRF=8;SRP=22.0271;SRR=25;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	0/1:-88.8545,0,-84.585:68:33:35:1259:1208:33,35	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr17	39919361	.	G	A	12508.80	.	AB=0.527719;ABP=9.27007;AC=1;AF=0.5;AN=2;AO=495;CIGAR=1X;DP=938;DPB=938;DPRA=0;EPP=3.36563;EPPR=8.71535;GTI=0;LEN=1;MEANALT=3;MQM=41.4162;MQMR=41.6523;NS=1;NUMALT=1;ODDS=2474.71;PAIRED=0.983838;PAIREDR=0.972727;PAO=0;PQA=0;PQR=0;PRO=0;QA=17992;QR=15863;RO=440;RPL=179;RPP=85.3464;RPPR=69.4179;RPR=316;RUN=1;SAF=260;SAP=5.75206;SAR=235;SF=15;SRF=237;SRP=8.71535;SRR=203;TYPE=snp	GT:GL:DP:RO:AO:QA:QR	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-1268.13,0,-1091.14:938:440:495:17992:15863	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr17	39923614	.	A	G	7221.34	.	AB=0;ABP=0;AC=67;AF=1;AN=72;AO=274;CIGAR=1X;DP=10171;DPB=274;DPRA=0;EPP=149.593;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=41.927;MQMR=0;NS=1;NUMALT=1;ODDS=384.45;PAIRED=0.992701;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=9744;QR=0;RO=0;RPL=20;RPP=436.956;RPPR=0;RPR=254;RUN=1;SAF=223;SAP=237.466;SAR=51;SF=0,1,2,3,4,5,6,7,8,9,10,11,12,13,14,15,16,17,18,19,20,21,22,23,24,25,26,27,29,30,31,32,33,34,35,36;SRF=0;SRP=0;SRR=0;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	1/1:-849.388,-82.4822,0:274:0:274:9744:0:0,274	1/1:-277.225,-26.7917,0:90:0:89:3182:0	1/1:-818.941,-81.5791,0:271:0:271:9410:0	1/1:-818.2,-78.8699,0:262:0:262:9434:0:0,262	1/1:-955.596,-92.1152,0:306:0:306:10979:0	1/1:-1180.83,-114.993,0:382:0:382:13581:0:0,382	1/1:-737.759,-71.6451,0:238:0:238:8474:0:0,238	1/1:-1228.68,-120.111,0:399:0:399:14152:0	1/1:-731.136,-70.441,0:234:0:234:8402:0	1/1:-721.647,-70.441,0:234:0:234:8315:0:0,234	1/1:-964.172,-93.6203,0:312:0:311:11088:0:0,311	1/1:-1098.48,-109.72,0:369:1:368:12670:14	1/1:-1317.86,-127.336,0:424:0:423:15141:0:0,423	1/1:-936.146,-93.6203,0:311:0:311:10740:0	1/1:-651.77,-63.2163,0:210:0:210:7480:0	1/1:-895.952,-87.9008,0:293:0:292:10339:0	0/1:-376.517,0,-328.973:284:137:147:5301:4767:137,147	1/1:-1125.03,-108.371,0:360:0:360:12923:0	1/1:-627.226,-60.8081,0:202:0:202:7196:0	1/1:-1008.55,-97.5337,0:324:0:324:11610:0	1/1:-978.822,-94.3799,0:316:1:315:11264:16:1,315	0/1:-333.719,0,-46.0982:156:31:124:4348:1060:31,124	1/1:-506.549,-50.272,0:167:0:167:5790:0	1/1:-1014.36,-100.243,0:333:0:333:11666:0	1/1:-394.609,-38.5318,0:129:0:128:4521:0:0,128	0/1:-523.504,0,-632.022:481:259:222:7683:8919:259,222	1/1:-1072.25,-108.07,0:359:0:359:12314:0	1/1:-1173.68,-115.897,0:385:0:385:13488:0:0,385	.	1/1:-1337.45,-132.754,0:441:0:441:15439:0	1/1:-677.61,-65.3235,0:217:0:217:7769:0	0/1:-260.2,0,-250.174:215:109:106:3720:3653	1/1:-907.009,-88.5028,0:294:0:294:10452:0	0/1:-351.572,0,-303.756:256:121:135:4922:4368	1/1:-679.24,-67.1297,0:223:0:223:7821:0	1/1:-474.273,-46.0576,0:153:0:153:5443:0	1/1:-813.11,-80.074,0:267:0:266:9334:0
+chr17	39925713	.	C	T	7714.98	.	AB=0.500506;ABP=3.0125;AC=12;AF=0.5;AN=22;AO=495;CIGAR=1X;DP=6649;DPB=989;DPRA=0;EPP=16.2804;EPPR=27.9889;GTI=0;LEN=1;MEANALT=3;MQM=41.5657;MQMR=41.6892;NS=1;NUMALT=1;ODDS=2597.95;PAIRED=0.981818;PAIREDR=0.989775;PAO=0;PQA=0;PQR=0;PRO=0;QA=17127;QR=17018;RO=489;RPL=110;RPP=334.763;RPPR=329.135;RPR=385;RUN=1;SAF=325;SAP=108.403;SAR=170;SF=7,8,12,21,22,23,27,30,31,35,36;SRF=317;SRP=96.3747;SRR=172;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	0/1:-1188.24,0,-1182.62:989:489:495:17127:17018	0/1:-697.713,0,-651.452:547:263:283:9893:9412	.	.	.	0/1:-1256.11,0,-1100.31:961:449:511:17792:15967:449,511	.	.	.	.	.	.	.	.	0/1:-108.742,0,-576.56:281:216:65:2208:7571:216,65	0/1:-349.827,0,-390.223:306:157:149:5056:5523	0/1:-941.291,0,-960.89:763:384:377:13452:13740	.	.	.	0/1:-963.083,0,-1051.34:849:432:413:14012:14996:432,413	.	.	1/1:-1701.86,-152.955,0:582:9:573:19834:249	0/1:-508.823,0,-541.422:432:217:215:7317:7714	.	.	.	0/1:-395.052,0,-378.505:310:151:158:5596:5417	0/1:-758.718,0,-778.188:629:313:315:10871:11102
+chr17	39925925	.	A	G	11303.28	.	AB=0;ABP=0;AC=61;AF=1;AN=74;AO=472;CIGAR=1X;DP=16812;DPB=472;DPRA=0;EPP=20.6949;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=41.8475;MQMR=0;NS=1;NUMALT=1;ODDS=658.936;PAIRED=0.989407;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=17527;QR=0;RO=0;RPL=371;RPP=338.392;RPPR=0;RPR=101;RUN=1;SAF=158;SAP=114.97;SAR=314;SF=0,1,2,3,4,5,6,7,8,9,10,11,12,13,14,15,16,17,18,19,20,21,22,23,24,25,26,27,28,29,30,31,32,33,34,35,36;SRF=0;SRP=0;SRR=0;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	1/1:-1512.13,-142.086,0:472:0:472:17527:0:0,472	0/1:-229.444,0,-201.686:163:77:85:3219:2898	1/1:-1588.65,-150.214,0:499:0:499:18488:0	1/1:-1505.03,-141.484,0:471:0:470:17543:0:0,470	1/1:-1989.42,-186.007,0:622:1:619:23051:15	0/1:-720.546,0,-782.539:573:295:276:10390:11050:295,276	0/1:-462.741,0,-463.455:351:176:175:6602:6572:176,175	0/1:-969.367,0,-868.489:715:339:373:13749:12552	0/1:-563.948,0,-482.965:408:192:216:7967:7021	1/1:-1246.67,-117.703,0:392:0:391:14441:0:0,391	0/1:-587.92,0,-512.337:430:201:227:8321:7452:201,227	1/1:-1629.46,-155.934,0:519:0:518:18887:0	1/1:-2428.3,-229.385,0:763:0:762:28205:0:0,762	1/1:-1417.59,-135.765,0:451:0:451:16449:0	1/1:-992.315,-94.5234,0:314:0:314:11486:0	1/1:-1770.86,-170.082,0:567:0:565:20693:0	0/1:-572.66,0,-421.275:375:166:209:7955:6200:166,209	1/1:-1756.67,-165.567,0:551:0:550:20363:0	1/1:-864.076,-79.8805,0:271:1:270:10024:17	1/1:-1755.9,-167.674,0:558:0:557:20364:0	1/1:-1841.35,-174.296,0:580:0:579:21393:0:0,579	0/1:-366.511,0,-124.638:197:59:138:4909:2117:59,138	1/1:-662.195,-63.8184,0:212:0:212:7682:0	1/1:-1887.6,-177.608,0:590:0:590:21876:0	1/1:-660.107,-62.0122,0:206:0:206:7644:0:0,206	0/1:-980.731,0,-958.878:760:372:387:14005:13733:372,387	0/1:-690.144,0,-552.377:508:228:279:9812:8172	1/1:-1850.33,-177.909,0:591:0:591:21477:0:0,591	1/1:-1045.81,-101.146,0:336:0:336:12116:0	1/1:-2432.87,-237.814,0:790:0:790:28214:0	1/1:-1296.88,-121.917,0:405:0:405:15035:0	0/1:-395.994,0,-407.179:315:158:157:5688:5823	0/1:-606.043,0,-557.165:450:219:230:8617:8011	0/1:-495.492,0,-469.472:372:180:191:7082:6716	1/1:-1071.82,-99.942,0:332:0:332:12398:0	1/1:-733.632,-68.5573,0:231:1:229:8497:37	1/1:-1518.26,-142.086,0:472:0:472:17602:0
+chr17	68172326	.	C	T	5389.00	.	AB=0.461538;ABP=5.51585;AC=10;AF=0.5;AN=20;AO=90;CIGAR=1X;DP=4422;DPB=195;DPRA=0;EPP=45.5712;EPPR=37.7745;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=42;NS=1;NUMALT=1;ODDS=516.241;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=3424;QR=3939;RO=105;RPL=58;RPP=19.3205;RPPR=28.3441;RPR=32;RUN=1;SAF=40;SAP=5.42305;SAR=50;SF=1,2,6,7,10,11,20,27,31,36;SRF=46;SRP=6.50534;SRR=59;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	0/1:-237.171,0,-282.109:195:105:90:3424:3939	0/1:-496.098,0,-660.55:454:254:199:7333:9221	.	.	.	0/1:-453.528,0,-503.155:364:190:174:6515:7085:190,174	0/1:-690.075,0,-623.179:506:244:261:9789:8972	.	.	0/1:-592.811,0,-461.37:396:177:218:8249:6727:177,218	0/1:-680.431,0,-797.599:579:310:269:9887:11225	.	.	.	.	.	.	.	.	0/1:-695.62,0,-684.267:525:262:261:9914:9750:262,261	.	.	.	.	.	.	0/1:-689.017,0,-726.066:554:279:271:9887:10311:279,271	.	.	.	0/1:-450.825,0,-431.358:338:167:171:6388:6157	.	.	.	.	0/1:-584.806,0,-764.586:511:283:227:8569:10649
+chr18	9117867	.	T	C	1375.73	.	AB=0.340426;ABP=13.4056;AC=58;AF=0.5;AN=68;AO=16;CIGAR=1X;DP=1928;DPB=47;DPRA=0;EPP=3.55317;EPPR=3.08035;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=42;NS=1;NUMALT=1;ODDS=69.1676;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=585;QR=1138;RO=31;RPL=4;RPP=11.6962;RPPR=14.8483;RPR=12;RUN=1;SAF=7;SAP=3.55317;SAR=9;SF=0,2,3,4,5,6,7,8,9,10,11,12,13,14,15,16,17,18,19,20,21,22,23,24,25,26,27,28,29,30,31,32,35,36;SRF=17;SRP=3.64073;SRR=14;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	0/1:-37.083,0,-84.8841:47:31:16:585:1138:31,16	.	1/1:-184.195,-18.0618,0:60:0:60:2141:0	1/1:-144.648,-13.2453,0:44:0:44:1669:0:0,44	0/1:-46.1476,0,-71.5191:45:26:19:684:978	1/1:-174.132,-16.5567,0:56:0:55:2004:0:0,55	1/1:-76.9403,-7.22472,0:24:0:24:882:0:0,24	1/1:-183.877,-17.7608,0:59:0:59:2112:0	0/1:-59.9583,0,-68.7428:48:25:23:854:961	1/1:-130.672,-12.3422,0:41:0:41:1502:0:0,41	1/1:-165.251,-15.9546,0:53:0:53:1896:0:0,53	0/1:-94.3764,0,-119.635:86:47:39:1379:1681	0/1:-78.4602,0,-133.058:82:49:33:1184:1818:49,33	0/1:-114.636,0,-108.391:90:42:47:1626:1560	1/1:-130.743,-12.6433,0:42:0:42:1501:0	1/1:-146.045,-14.7505,0:49:0:49:1715:0	1/1:-134.092,-12.6433,0:42:0:42:1542:0:0,42	1/1:-237.633,-23.1793,0:77:0:77:2791:0	0/1:-38.2049,0,-40.8215:30:15:15:541:573	1/1:-162.157,-16.5567,0:55:0:55:1858:0	1/1:-178.155,-17.1587,0:57:0:57:2048:0:0,57	0/1:-90.6839,0,-29.1456:47:13:34:1216:497:13,34	1/1:-153.422,-15.0515,0:50:0:50:1758:0	0/1:-77.5528,0,-32.1284:45:14:31:1044:523	1/1:-117.83,-11.1381,0:37:0:37:1353:0:0,37	1/1:-292.474,-28.8989,0:96:0:96:3361:0:0,96	1/1:-225.424,-23.4803,0:78:0:78:2583:0	1/1:-237.26,-23.4803,0:78:0:78:2727:0:0,78	1/1:-159.419,-15.9546,0:53:0:53:1840:0	1/1:-252.974,-24.6845,0:82:0:82:2908:0	0/1:-38.8087,0,-73.8596:45:28:17:597:1003	1/1:-228.555,-22.2762,0:75:0:74:2623:0	1/1:-166.878,-16.5567,0:56:0:55:1924:0	.	.	1/1:-106.006,-10.235,0:34:0:34:1215:0	1/1:-193.968,-15.9125,0:65:1:64:2268:38
+chr18	9119489	.	A	T	2658.33	.	AB=0.432432;ABP=10.3464;AC=6;AF=0.5;AN=12;AO=80;CIGAR=1X;DP=1399;DPB=185;DPRA=0;EPP=3.11887;EPPR=5.51266;GTI=0;LEN=1;MEANALT=1;MQM=38.2;MQMR=39.8857;NS=1;NUMALT=1;ODDS=398.26;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2954;QR=3960;RO=105;RPL=35;RPP=5.72464;RPPR=20.4028;RPR=45;RUN=1;SAF=38;SAP=3.44459;SAR=42;SF=4,15,18,25,27,29;SRF=47;SRP=5.51266;SRR=58;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	0/1:-180.401,0,-272.129:185:105:80:2954:3960	.	.	.	.	.	.	.	.	.	.	0/1:-209.068,0,-227.521:180:91:89:3320:3409	.	.	0/1:-172.752,0,-173.161:144:74:70:2651:2749	.	.	.	.	.	.	0/1:-391.226,0,-383.206:314:155:159:5945:5704:155,159	.	0/1:-372.227,0,-389.74:313:157:156:5639:5827:157,156	.	0/1:-322.014,0,-324.535:263:130:133:4782:4782	.	.	.	.	.	.	.
+chr18	28648200	.	C	T	2396.65	.	AB=0.571429;ABP=10.7656;AC=6;AF=0.5;AN=12;AO=100;CIGAR=1X;DP=1156;DPB=175;DPRA=0;EPP=66.3304;EPPR=61.6401;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=41.7467;NS=1;NUMALT=1;ODDS=404.771;PAIRED=1;PAIREDR=0.986667;PAO=0;PQA=0;PQR=0;PRO=0;QA=3671;QR=2791;RO=75;RPL=47;RPP=3.79203;RPPR=4.429;RPR=53;RUN=1;SAF=44;SAP=6.13722;SAR=56;SF=5,7,11,16,24,27;SRF=41;SRP=4.429;SRR=34;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	0/1:-264.799,0,-189.357:175:75:100:3671:2791:75,100	.	0/1:-195.756,0,-261.794:178:101:77:2881:3640	.	.	.	0/1:-344.76,0,-316.497:264:131:133:4906:4570	.	.	.	.	0/1:-209.466,0,-214.009:163:83:80:2991:3037:83,80	.	.	.	.	.	.	.	0/1:-115.527,0,-143.084:98:53:45:1675:1985:53,45	.	.	0/1:-381.652,0,-327.162:278:133:145:5389:4715:133,145	.	.	.	.	.	.	.	.	.
+chr18	28648975	.	C	T	3133.48	.	AB=0.505017;ABP=3.07566;AC=7;AF=0.5;AN=14;AO=151;CIGAR=1X;DP=2233;DPB=299;DPRA=0;EPP=7.1663;EPPR=23.2331;GTI=0;LEN=1;MEANALT=2;MQM=36.1854;MQMR=37.4694;NS=1;NUMALT=1;ODDS=747.915;PAIRED=1;PAIREDR=0.993197;PAO=0;PQA=0;PQR=0;PRO=0;QA=5511;QR=5412;RO=147;RPL=69;RPP=5.44062;RPPR=9.52472;RPR=82;RUN=1;SAF=90;SAP=15.1044;SAR=61;SF=14,18,19,21,22,23,32;SRF=87;SRP=13.779;SRR=60;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-333.591,0,-350.004:299:147:151:5511:5412	.	.	.	0/1:-244.686,0,-284.801:231:116:115:4083:4234	0/1:-448.979,0,-504.113:423:208:215:7855:7536	.	0/1:-79.5935,0,-214.884:148:92:54:1950:3204:92,54	0/1:-259.011,0,-261.896:233:115:116:4221:3982	0/1:-437.296,0,-686.49:482:273:209:7687:9923	.	.	.	.	.	.	.	.	0/1:-462.227,0,-499.344:417:205:211:7762:7481	.	.	.	.
+chr18	28649042	.	T	C	3521.88	.	AB=0.540541;ABP=7.76406;AC=2;AF=0.5;AN=4;AO=180;CIGAR=1X;DP=571;DPB=333;DPRA=0;EPP=24.2907;EPPR=6.66752;GTI=0;LEN=1;MEANALT=2;MQM=40.3222;MQMR=40.8947;NS=1;NUMALT=1;ODDS=855.504;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=6642;QR=5703;RO=152;RPL=112;RPP=26.3657;RPPR=47.8112;RPR=68;RUN=1;SAF=81;SAP=6.91895;SAR=99;SF=10,31;SRF=78;SRP=3.23888;SRR=74;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	0/1:-458.581,0,-383.923:333:152:180:6642:5703:152,180	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-266.668,0,-332.366:238:129:109:3955:4704	.	.	.	.	.
+chr18	28666526	.	TTG	TTAATG	5649.49	.	AB=0;ABP=0;AC=74;AF=1;AN=74;AO=189;CIGAR=1M3I2M;DP=7482;DPB=396;DPRA=0;EPP=5.59539;EPPR=0;GTI=0;LEN=3;MEANALT=2;MQM=41.8413;MQMR=0;NS=1;NUMALT=1;ODDS=266.615;PAIRED=0.994709;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=6809;QR=0;RO=0;RPL=27;RPP=212.402;RPPR=0;RPR=162;RUN=1;SAF=114;SAP=20.4855;SAR=75;SF=0,1,2,3,4,5,6,7,8,9,10,11,12,13,14,15,16,17,18,19,20,21,22,23,24,25,26,27,28,29,30,31,32,33,34,35,36;SRF=0;SRP=0;SRR=0;TYPE=ins	GT:GL:DP:RO:AO:QA:QR:AD	1/1:-590.275,-56.8947,0:207:0:189:6809:0:0,189	1/1:.,.,0:89:2:83:2974:78	1/1:.,.,0:240:2:229:8188:63	1/1:-637.176,-60.8081,0:208:0:200:7270:0:0,200	1/1:.,.,0:243:2:228:8418:78	1/1:-713.961,-68.3338,0:240:0:227:8254:0:0,227	1/1:-549.201,-53.8844,0:184:0:179:6332:0:0,179	1/1:.,.,0:279:1:260:9602:39	1/1:.,.,0:155:2:147:5283:78	1/1:-466.232,-45.1545,0:161:0:150:5376:0:0,150	1/1:-619.777,-60.8081,0:210:0:198:7061:0:0,198	1/1:.,.,0:304:3:291:10169:112	1/1:-766.261,-75.8596,0:263:0:252:8849:0:0,252	1/1:.,.,0:275:1:267:9512:35	1/1:.,.,0:143:1:136:4992:39	1/1:.,.,0:227:2:220:7873:78	1/1:-524.293,-50.272,0:176:0:167:6057:0:0,167	1/1:.,.,0:218:4:205:7424:134	1/1:.,.,0:125:3:118:4090:115	1/1:.,.,0:208:2:197:7162:77	1/1:-729.848,-71.0431,0:242:0:236:8435:0:0,236	1/1:-280.883,-29.1999,0:102:0:97:3222:0:0,97	1/1:.,.,0:112:1:103:3499:39	1/1:.,.,0:248:0:235:8459:0	1/1:-304.215,-29.1999,0:99:0:97:3510:0:0,97	1/1:-908.034,-88.8039,0:308:0:295:10480:0:0,295	1/1:.,.,0:274:6:263:8969:203	1/1:-863.716,-84.2884,0:293:0:278:9882:0:0,278	1/1:.,.,0:152:0:150:5208:0	1/1:.,.,0:289:3:277:9639:110	1/1:.,.,0:155:1:146:5132:38	1/1:.,.,0:164:2:156:5485:63	1/1:.,.,0:189:2:170:6099:78	1/1:.,.,0:167:0:163:5901:0	1/1:.,.,0:186:2:173:6288:65	1/1:.,.,0:91:0:87:3163:0	1/1:.,.,0:256:1:242:8738:39
+chr18	28672067	.	T	C	5486.05	.	AB=0.5;ABP=3.0103;AC=1;AF=0.5;AN=2;AO=222;CIGAR=1X;DP=444;DPB=444;DPRA=0;EPP=33.6848;EPPR=23.7078;GTI=0;LEN=1;MEANALT=1;MQM=41.9189;MQMR=41.8333;NS=1;NUMALT=1;ODDS=1263.21;PAIRED=0.995495;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=8033;QR=8337;RO=222;RPL=97;RPP=10.6789;RPPR=31.5329;RPR=125;RUN=1;SAF=138;SAP=31.5329;SAR=84;SF=25;SRF=134;SRP=23.7078;SRR=88;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-562.562,0,-584.653:444:222:222:8033:8337:222,222	.	.	.	.	.	.	.	.	.	.	.
+chr18	28673565	.	T	C	1307.20	.	AB=0.565217;ABP=4.70971;AC=8;AF=0.5;AN=16;AO=26;CIGAR=1X;DP=901;DPB=46;DPRA=0;EPP=6.01695;EPPR=9.95901;GTI=0;LEN=1;MEANALT=1;MQM=41.9231;MQMR=40.05;NS=1;NUMALT=1;ODDS=98.77;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=962;QR=739;RO=20;RPL=16;RPP=6.01695;RPPR=6.91895;RPR=10;RUN=1;SAF=16;SAP=6.01695;SAR=10;SF=1,2,11,13,26,32,35,36;SRF=9;SRP=3.44459;SRR=11;TYPE=snp	GT:GL:DP:RO:AO:QA:QR	.	0/1:-69.7144,0,-49.3526:46:20:26:962:739	0/1:-96.0101,0,-185.123:107:67:40:1476:2509	.	.	.	.	.	.	.	.	0/1:-214.175,0,-204.058:169:80:87:3063:2932	.	0/1:-164.554,0,-197.297:141:76:65:2385:2760	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-173.672,0,-181.528:145:73:72:2506:2591	.	.	.	.	.	0/1:-181.792,0,-116.553:116:48:68:2530:1745	.	.	0/1:-77.3523,0,-58.3719:52:23:29:1069:850	0/1:-131.358,0,-191.704:125:70:55:1947:2651
+chr18	29078304	.	G	T	1559.12	.	AB=0.577982;ABP=8.76769;AC=1;AF=0.5;AN=2;AO=63;CIGAR=1X;DP=109;DPB=109;DPRA=0;EPP=3.32051;EPPR=3.0103;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=40.5217;NS=1;NUMALT=1;ODDS=227.739;PAIRED=1;PAIREDR=0.956522;PAO=0;PQA=0;PQR=0;PRO=0;QA=2309;QR=1645;RO=46;RPL=50;RPP=50.1967;RPPR=18.305;RPR=13;RUN=1;SAF=32;SAP=3.04477;SAR=31;SF=12;SRF=23;SRP=3.0103;SRR=23;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-167.58,0,-106.927:109:46:63:2309:1645:46,63	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr18	29078333	.	C	G	228.43	.	AB=0.571429;ABP=3.94093;AC=1;AF=0.5;AN=2;AO=12;CIGAR=1X;DP=21;DPB=21;DPRA=0;EPP=3.0103;EPPR=5.18177;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=42;NS=1;NUMALT=1;ODDS=38.4252;PAIRED=1;PAIREDR=0.888889;PAO=0;PQA=0;PQR=0;PRO=0;QA=422;QR=330;RO=9;RPL=12;RPP=29.068;RPPR=14.8328;RPR=0;RUN=1;SAF=6;SAP=3.0103;SAR=6;SF=15;SRF=5;SRP=3.25157;SRR=4;TYPE=snp	GT:GL:DP:RO:AO:QA:QR	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-30.6024,0,-22.6901:21:9:12:422:330	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr18	29101215	.	CTTTTTTTTTTTTTTTAATAAATAAATAC	CTTTTTTTTTTTTTTAAATAAATAAATAC,CTTTTTTTTTTTTTTAATAAATAAATAC	162.20	.	AB=0.473684;ABP=3.23888;AC=2,8;AF=0.5;AN=20;AO=18;CIGAR=15M1X13M;DP=577;DPB=38.1379;DPRA=0;EPP=7.35324;EPPR=16.0391;GTI=0;LEN=1;MEANALT=11;MQM=41.8889;MQMR=42;NS=1;NUMALT=1;ODDS=2.10907;PAIRED=0.888889;PAIREDR=1;PAO=0.333333;PQA=12.8333;PQR=12.8333;PRO=0.333333;QA=661;QR=213;RO=6;RPL=15;RPP=20.3821;RPPR=3.0103;RPR=3;RUN=1;SAF=9;SAP=3.0103;SAR=9;SF=0,5,10,19,21,22,25,27,33,34;SRF=3;SRP=3.0103;SRR=3;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	0/1:-46.5873,0,-7.82813,.,.,.:38:6:18,.:661,.:213:6,18	.	.	.	.	0/2:-11.5587,.,.,0,.,-95.6219:56:35:.,11:.,289:1250:35,11	.	.	.	.	0/2:-22.4468,.,.,0,.,-73.4342:50:28:.,12:.,394:999:28,12	.	.	.	.	.	.	.	.	0/2:.,.,.,.,.,-38.3548:47:19:.,12:.,267:682	.	0/2:-16.6636,.,.,0,.,-56.8715:44:21:.,10:.,335:719:21,10	0/2:.,.,.,.,.,-94.4676:60:37:.,13:.,397:1287	.	.	0/2:-24.6985,.,.,0,.,-118.456:98:45:.,17:.,534:1617:45,17	.	0/1:-64.3101,0,-63.6641,.,.,.:97:26:25,.:958,.:939:26,25	.	.	.	.	.	0/2:.,.,.,.,.,-40.8729:41:16:.,11:.,322:559	0/2:.,.,.,.,.,-52.9742:46:22:.,11:.,328:774	.	.
+chr18	29104564	.	C	A	2038.71	.	AB=0.502994;ABP=3.0233;AC=13;AF=0.5;AN=26;AO=84;CIGAR=1X;DP=2401;DPB=167;DPRA=0;EPP=3.42391;EPPR=3.11623;GTI=0;LEN=1;MEANALT=2;MQM=41.7024;MQMR=42;NS=1;NUMALT=1;ODDS=470.732;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3134;QR=3041;RO=82;RPL=41;RPP=3.1137;RPPR=3.434;RPR=43;RUN=1;SAF=65;SAP=57.7107;SAR=19;SF=5,8,11,13,15,19,20,21,22,23,25,27,30;SRF=57;SRP=30.1272;SRR=25;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	0/1:-221.252,0,-213.621:167:82:84:3134:3041:82,84	.	.	0/1:-186.555,0,-144.427:124:56:68:2589:2093	.	.	0/1:-411.904,0,-326.165:284:130:153:5758:4743	.	0/1:-293.868,0,-351.145:252:136:115:4268:4926	.	0/1:-167.889,0,-228.037:154:84:70:2486:3166	.	.	.	0/1:-148.586,0,-293.252:169:107:62:2299:4002	0/1:-183.817,0,-264.809:169:97:72:2711:3643:97,72	0/1:-52.1689,0,-285.026:132:102:30:1085:3758:102,30	0/1:-132.368,0,-166.672:116:64:52:1927:2324	0/1:-148.125,0,-168.112:121:63:57:2130:2375	.	0/1:-345.084,0,-471.581:316:178:138:5153:6534:178,138	.	0/1:-334.369,0,-312.108:249:122:127:4735:4458:122,127	.	.	0/1:-175.33,0,-215.499:148:81:67:2541:2996	.	.	.	.	.	.
+chr18	29104698	.	C	T	3577.30	.	AB=0.518018;ABP=3.63631;AC=25;AF=0.5;AN=38;AO=115;CIGAR=1X;DP=3735;DPB=222;DPRA=0;EPP=3.02918;EPPR=11.96;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=42;NS=1;NUMALT=1;ODDS=606.573;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=4230;QR=3898;RO=107;RPL=52;RPP=5.29507;RPPR=4.65412;RPR=63;RUN=1;SAF=69;SAP=12.9991;SAR=46;SF=0,4,5,8,11,13,15,19,20,21,22,23,25,27,29,30,31,32,35;SRF=66;SRP=15.6941;SRR=41;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	0/1:-300.329,0,-272.43:222:107:115:4230:3898:107,115	.	.	.	1/1:-405.797,-38.5318,0:128:0:128:4681:0	0/1:-362.041,0,-291.811:254:116:137:5095:4233:116,137	.	.	0/1:-153.377,0,-157.016:120:61:59:2187:2218	.	.	1/1:-777.459,-72.3822,0:253:2:250:9015:48	.	0/1:-294.441,0,-288.05:231:115:116:4190:4104	.	1/1:-569.956,-50.0403,0:185:2:183:6652:72	.	.	.	0/1:-174.587,0,-257.942:170:97:73:2604:3559	0/1:-323.82,0,-291.822:241:118:123:4591:4219:118,123	0/1:-48.2616,0,-291.293:134:105:29:1018:3821:105,29	0/1:-125.011,0,-129.251:100:50:50:1799:1831	0/1:-173.665,0,-216.697:152:83:69:2543:3019	.	0/1:-458.348,0,-527.395:386:204:181:6656:7411:204,181	.	1/1:-1084.04,-102.952,0:342:0:342:12524:0:0,342	.	1/1:-805.257,-77.3378,0:264:1:261:9306:17	1/1:-503.578,-47.5627,0:159:0:158:5823:0	0/1:-176.862,0,-177.796:136:68:67:2510:2515	0/1:-155.788,0,-238.166:154:90:64:2323:3270	.	.	0/1:-114.084,0,-152.263:104:58:46:1673:2108	.
+chr18	29104714	.	A	G	2381.79	.	AB=0.491039;ABP=3.20488;AC=9;AF=0.5;AN=18;AO=137;CIGAR=1X;DP=1983;DPB=279;DPRA=0;EPP=11.395;EPPR=20.6879;GTI=0;LEN=1;MEANALT=1;MQM=41.7226;MQMR=41.8662;NS=1;NUMALT=1;ODDS=772.681;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=4980;QR=5241;RO=142;RPL=44;RPP=41.0665;RPPR=38.2432;RPR=93;RUN=1;SAF=71;SAP=3.40655;SAR=66;SF=3,7,8,10,16,18,24,28,33;SRF=65;SRP=5.21236;SRR=77;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	0/1:-347.151,0,-369.776:279:142:137:4980:5241:142,137	.	.	.	0/1:-324.189,0,-429.761:299:167:132:4778:6035	0/1:-247.45,0,-250.98:192:97:95:3513:3560	.	0/1:-339.417,0,-311.358:251:122:129:4784:4453:122,129	.	.	.	.	.	0/1:-300.646,0,-415.277:275:155:119:4415:5755:155,119	.	0/1:-149.735,0,-240.098:151:89:62:2243:3287	.	.	.	.	.	0/1:-172.569,0,-180.485:135:70:65:2459:2541:70,65	.	.	.	0/1:-151.617,0,-324.133:190:122:68:2389:4418	.	.	.	.	0/1:-226.44,0,-310.369:211:120:91:3335:4303	.	.	.
+chr18	29122618	.	G	A	9311.44	.	AB=0.491391;ABP=3.49636;AC=1;AF=0.5;AN=2;AO=371;CIGAR=1X;DP=755;DPB=755;DPRA=0;EPP=80.4166;EPPR=72.8659;GTI=0;LEN=1;MEANALT=2;MQM=41.7925;MQMR=41.7598;NS=1;NUMALT=1;ODDS=2144.04;PAIRED=0.973046;PAIREDR=0.968668;PAO=0;PQA=0;PQR=0;PRO=0;QA=13636;QR=14007;RO=383;RPL=158;RPP=20.7157;RPPR=3.15204;RPR=213;RUN=1;SAF=166;SAP=11.9128;SAR=205;SF=25;SRF=171;SRP=12.541;SRR=212;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-949.381,0,-982.739:755:383:371:13636:14007:383,371	.	.	.	.	.	.	.	.	.	.	.
+chr18	29122799	.	G	A	1005.33	.	AB=0.57732;ABP=8.04722;AC=13;AF=0.5;AN=26;AO=56;CIGAR=1X;DP=1343;DPB=97;DPRA=0;EPP=6.88793;EPPR=11.961;GTI=0;LEN=1;MEANALT=1;MQM=39.9464;MQMR=40.9756;NS=1;NUMALT=1;ODDS=186.561;PAIRED=0.946429;PAIREDR=0.853659;PAO=0;PQA=0;PQR=0;PRO=0;QA=1912;QR=1497;RO=41;RPL=52;RPP=92.3509;RPPR=83.5666;RPR=4;RUN=1;SAF=19;SAP=15.5738;SAR=37;SF=5,8,11,13,14,15,19,20,21,22,23,25,27;SRF=13;SRP=14.9269;SRR=28;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	0/1:-133.479,0,-99.2365:97:41:56:1912:1497:41,56	.	.	0/1:-60.9403,0,-132.498:80:51:29:1027:1841	.	.	0/1:-173.729,0,-179.123:150:75:74:2602:2674	.	0/1:-137.209,0,-142.816:124:59:63:2141:2129	0/1:-111.645,0,-73.2677:77:32:45:1674:1125	0/1:-71.4702,0,-138.656:91:54:36:1204:1963	.	.	.	0/1:-77.7247,0,-82.391:68:33:35:1157:1226	0/1:-130.553,0,-87.1496:94:39:54:1899:1362:39,54	0/1:-41.1454,0,-97.4337:56:38:18:668:1337:38,18	0/1:-62.2059,0,-95.421:69:40:28:1025:1391	0/1:-120.098,0,-126.582:114:56:55:1903:1950	.	0/1:-238.459,0,-190.852:179:81:98:3481:2909:81,98	.	0/1:-144.87,0,-191.189:144:75:69:2329:2760:75,69	.	.	.	.	.	.	.	.	.
+chr18	29125854	.	A	G	3194.56	.	AB=0.494444;ABP=3.05855;AC=12;AF=0.5;AN=20;AO=89;CIGAR=1X;DP=2059;DPB=180;DPRA=0;EPP=20.7969;EPPR=58.6;GTI=0;LEN=1;MEANALT=2;MQM=42;MQMR=41.9556;NS=1;NUMALT=1;ODDS=468.662;PAIRED=0.988764;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3196;QR=3127;RO=90;RPL=39;RPP=5.96253;RPPR=21.9262;RPR=50;RUN=1;SAF=42;SAP=3.62026;SAR=47;SF=0,4,11,15,27,29,30,31,32,35;SRF=40;SRP=5.42305;SRR=50;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	0/1:-223.737,0,-217.919:180:90:89:3196:3127:90,89	.	.	.	1/1:-595.69,-55.7274,0:195:1:194:6904:30	.	.	.	.	.	.	0/1:-390.655,0,-320.88:302:138:161:5527:4727	.	.	.	0/1:-167.57,0,-226.836:161:91:69:2481:3167	.	.	.	.	.	.	.	.	.	.	.	0/1:-354.461,0,-291.575:275:127:147:5024:4309:127,147	.	1/1:-873.72,-85.7489,0:302:2:299:10159:55	0/1:-161.699,0,-220.042:160:89:71:2409:3083	0/1:-219.146,0,-230.172:192:96:94:3168:3318	0/1:-202.844,0,-259.347:190:102:88:2982:3643	.	.	0/1:-139.297,0,-110.808:102:47:55:1951:1622	.
+chr18	29126670	.	T	C	7598.02	.	AB=0.496278;ABP=3.05879;AC=26;AF=0.5;AN=40;AO=200;CIGAR=1X;DP=8241;DPB=403;DPRA=0;EPP=32.3686;EPPR=34.3569;GTI=0;LEN=1;MEANALT=2;MQM=41.98;MQMR=42;NS=1;NUMALT=1;ODDS=1122.49;PAIRED=1;PAIREDR=0.990099;PAO=0;PQA=0;PQR=0;PRO=0;QA=7252;QR=7363;RO=202;RPL=133;RPP=50.305;RPPR=71.8094;RPR=67;RUN=1;SAF=61;SAP=69.0665;SAR=139;SF=0,4,5,8,11,13,14,15,19,20,21,22,23,25,27,29,30,31,32,35;SRF=59;SRP=78.8613;SRR=143;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	0/1:-509.139,0,-516.672:403:202:200:7252:7363:202,200	.	.	.	1/1:-1368.64,-130.045,0:432:0:432:15782:0	0/1:-713.258,0,-572.603:503:227:275:10015:8360:227,275	.	.	0/1:-403.963,0,-387.075:299:145:154:5693:5521	.	.	1/1:-1736.91,-161.865,0:561:2:558:20099:78	.	0/1:-623.238,0,-688.615:514:267:247:8949:9768	0/1:-404.191,0,-435.64:325:164:160:5776:6171	1/1:-1369.96,-128.97,0:440:1:438:15882:35	.	.	.	0/1:-489.93,0,-545.535:398:205:193:7021:7709	0/1:-738.499,0,-738.748:568:280:288:10491:10522:280,288	0/1:-138.239,0,-385.424:205:142:63:2297:5150:142,63	0/1:-352.665,0,-220.526:227:92:135:4837:3330	0/1:-573.892,0,-605.641:453:231:222:8192:8584	.	0/1:-897.38,0,-751.9:644:296:348:12576:10954:296,348	.	1/1:-1629.47,-158.342,0:527:0:526:18768:0:0,526	.	1/1:-1759.97,-170.082,0:566:0:565:20259:0	1/1:-984.994,-90.2045,0:311:2:309:11380:36	0/1:-375.226,0,-440.498:317:167:150:5415:6196	0/1:-420.541,0,-458.868:339:173:166:6015:6504	.	.	0/1:-295.991,0,-243.567:209:96:113:4127:3535	.
+chr18	29172865	.	G	A	1993.86	.	AB=0.441989;ABP=8.30101;AC=1;AF=0.5;AN=2;AO=80;CIGAR=1X;DP=181;DPB=181;DPRA=0;EPP=3.98746;EPPR=3.0318;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=42;NS=1;NUMALT=1;ODDS=459.104;PAIRED=1;PAIREDR=0.990099;PAO=0;PQA=0;PQR=0;PRO=0;QA=3024;QR=3798;RO=101;RPL=35;RPP=5.72464;RPPR=26.4235;RPR=45;RUN=1;SAF=44;SAP=4.74748;SAR=36;SF=30;SRF=52;SRP=3.2038;SRR=49;TYPE=snp	GT:GL:DP:RO:AO:QA:QR	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-206.831,0,-274.821:181:101:80:3024:3798	.	.	.	.	.	.
+chr18	29178513	.	GTCTG	CTCTG	349.91	.	AB=0.410714;ABP=6.88793;AC=3;AF=0.5;AN=6;AO=23;CIGAR=1X4M;DP=158;DPB=56.6;DPRA=0;EPP=7.63648;EPPR=5.8675;GTI=0;LEN=1;MEANALT=10;MQM=33.913;MQMR=39.6842;NS=1;NUMALT=1;ODDS=61.6631;PAIRED=0.869565;PAIREDR=0.789474;PAO=0;PQA=0;PQR=0;PRO=0;QA=558;QR=676;RO=19;RPL=4;RPP=24.253;RPPR=12.2676;RPR=19;RUN=1;SAF=12;SAP=3.10471;SAR=11;SF=3,18,34;SRF=17;SRP=28.7251;SRR=2;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	0/1:-34.7755,0,-43.7794:56:19:23:558:676:19,23	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:.,.,-43.1933:45:24:19:544:688	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:.,.,-29.2844:57:19:35:1003:553	.	.
+chr18	29178610	.	C	T	1604.91	.	AB=0.452703;ABP=5.88603;AC=1;AF=0.5;AN=2;AO=67;CIGAR=1X;DP=148;DPB=148;DPRA=0;EPP=3.82055;EPPR=10.7579;GTI=0;LEN=1;MEANALT=1;MQM=41.3731;MQMR=40.358;NS=1;NUMALT=1;ODDS=369.543;PAIRED=1;PAIREDR=0.938272;PAO=0;PQA=0;PQR=0;PRO=0;QA=2502;QR=3005;RO=81;RPL=17;RPP=38.3048;RPPR=35.8505;RPR=50;RUN=1;SAF=39;SAP=6.93191;SAR=28;SF=24;SRF=46;SRP=6.2541;SRR=35;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-170.141,0,-207.77:148:81:67:2502:3005:81,67	.	.	.	.	.	.	.	.	.	.	.	.
+chr18	32335915	.	A	G	1819.88	.	AB=0.522989;ABP=3.809;AC=4;AF=0.5;AN=8;AO=91;CIGAR=1X;DP=642;DPB=174;DPRA=0;EPP=4.17955;EPPR=6.82362;GTI=0;LEN=1;MEANALT=2;MQM=41.4945;MQMR=41.9756;NS=1;NUMALT=1;ODDS=470.012;PAIRED=0.978022;PAIREDR=0.987805;PAO=0;PQA=0;PQR=0;PRO=0;QA=3253;QR=3117;RO=82;RPL=17;RPP=80.539;RPPR=59.0449;RPR=74;RUN=1;SAF=53;SAP=8.37933;SAR=38;SF=2,9,10,19;SRF=49;SRP=9.78953;SRR=33;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	0/1:-228.41,0,-217.524:174:82:91:3253:3117	.	.	.	.	.	.	0/1:-165.779,0,-211.325:145:78:67:2408:2946:78,67	0/1:-209.037,0,-205.921:159:78:80:2964:2925:78,80	.	.	.	.	.	.	.	.	0/1:-192.626,0,-228.039:164:87:77:2792:3206	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr18	32400909	.	ACA	AA	2075.22	.	AB=0.426036;ABP=11.0409;AC=5;AF=0.5;AN=8;AO=72;CIGAR=1M1D1M;DP=567;DPB=152.667;DPRA=0;EPP=30.1537;EPPR=22.6469;GTI=0;LEN=1;MEANALT=3;MQM=41.9444;MQMR=41.5914;NS=1;NUMALT=1;ODDS=359.465;PAIRED=1;PAIREDR=1;PAO=8;PQA=287.5;PQR=281.5;PRO=8;QA=2553;QR=3442;RO=93;RPL=54;RPP=42.0968;RPPR=54.5886;RPR=18;RUN=1;SAF=33;SAP=4.09604;SAR=39;SF=13,17,20,23;SRF=38;SRP=9.75821;SRR=55;TYPE=del	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-169.878,0,-244.951:169:93:72:2553:3442	.	.	.	0/1:-158.67,0,-243.292:156:88:68:2433:3334	.	.	1/1:-417.13,-40.338,0:133:0:132:4837:0:0,132	.	.	0/1:-144.281,0,-141.487:109:53:55:2048:2017	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr18	32418186	.	T	A	2604.39	.	AB=0.43609;ABP=7.72876;AC=16;AF=0.5;AN=26;AO=58;CIGAR=1X;DP=2181;DPB=133;DPRA=0;EPP=46.29;EPPR=59.8207;GTI=0;LEN=1;MEANALT=2;MQM=41.6897;MQMR=42;NS=1;NUMALT=1;ODDS=313.914;PAIRED=1;PAIREDR=0.986486;PAO=0;PQA=0;PQR=0;PRO=0;QA=2190;QR=2814;RO=74;RPL=40;RPP=21.1309;RPPR=10.5224;RPR=18;RUN=1;SAF=28;SAP=3.16006;SAR=30;SF=4,6,7,13,16,17,20,23,25,29,30,34,36;SRF=32;SRP=5.94472;SRR=42;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	0/1:-149.221,0,-203.268:133:74:58:2190:2814	.	0/1:-176.279,0,-120.331:112:47:65:2423:1781:47,65	0/1:-227.273,0,-402.527:238:144:94:3451:5501	.	.	.	.	.	1/1:-580.95,-55.9916,0:186:0:186:6742:0	.	.	0/1:-194.114,0,-233.302:160:85:75:2826:3265:85,75	0/1:-141.244,0,-231.808:143:83:59:2133:3181	.	.	1/1:-670.503,-62.3132,0:207:0:207:7768:0:0,207	.	.	0/1:-167.872,0,-194.423:139:72:66:2418:2736	.	0/1:-300.484,0,-263.817:216:102:114:4229:3801:102,114	.	.	.	0/1:-221.557,0,-374.231:230:136:93:3344:5142	0/1:-163.525,0,-165.365:126:63:63:2325:2350	.	.	.	1/1:-388.979,-38.2308,0:127:0:127:4517:0	.	0/1:-205.188,0,-217.372:164:83:80:2936:3084
+chr18	32428317	.	G	A	2672.74	.	AB=0.507109;ABP=3.10292;AC=1;AF=0.5;AN=2;AO=107;CIGAR=1X;DP=211;DPB=211;DPRA=0;EPP=27.8706;EPPR=19.3799;GTI=0;LEN=1;MEANALT=1;MQM=41.8131;MQMR=41.5;NS=1;NUMALT=1;ODDS=584.344;PAIRED=0.981308;PAIREDR=0.990385;PAO=0;PQA=0;PQR=0;PRO=0;QA=3926;QR=3777;RO=104;RPL=52;RPP=3.19295;RPPR=9.77527;RPR=55;RUN=1;SAF=63;SAP=10.3365;SAR=44;SF=20;SRF=65;SRP=17.1249;SRR=39;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-277.141,0,-264.097:211:104:107:3926:3777:104,107	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr18	32444040	.	G	A	2632.76	.	AB=0.437086;ABP=8.2017;AC=19;AF=0.5;AN=36;AO=66;CIGAR=1X;DP=3799;DPB=151;DPRA=0;EPP=32.6213;EPPR=80.2892;GTI=0;LEN=1;MEANALT=1;MQM=41.697;MQMR=41.5529;NS=1;NUMALT=1;ODDS=368.956;PAIRED=0.954545;PAIREDR=0.964706;PAO=0;PQA=0;PQR=0;PRO=0;QA=2512;QR=3212;RO=85;RPL=27;RPP=7.74806;RPPR=4.26209;RPR=39;RUN=1;SAF=33;SAP=3.0103;SAR=33;SF=2,4,6,7,11,13,15,16,17,19,20,21,23,25,29,30,34,36;SRF=42;SRP=3.03585;SRR=43;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	0/1:-170.461,0,-229.279:151:85:66:2512:3212	.	0/1:-205.125,0,-298.969:191:109:82:3126:4149	.	0/1:-186.987,0,-221.868:154:82:72:2737:3104:82,72	0/1:-289.896,0,-283.255:220:110:110:4191:4100	.	.	.	0/1:-377.841,0,-421.653:308:160:147:5463:5981	.	0/1:-364.21,0,-403.276:294:154:140:5275:5735	.	0/1:-281.755,0,-261.893:212:100:109:4091:3789	0/1:-208.807,0,-198.344:154:76:78:3005:2878:76,78	0/1:-232.376,0,-263.112:185:97:88:3390:3739	.	0/1:-203.052,0,-221.825:160:83:77:2912:3171	0/1:-286.52,0,-320.935:232:121:111:4218:4592:121,111	0/1:-67.4295,0,-304.862:144:109:35:1289:4024:109,35	.	0/1:-286.894,0,-246.915:202:96:106:4050:3657	.	0/1:-558.409,0,-485.237:402:190:211:7942:7114:190,211	.	.	.	0/1:-330.33,0,-433.809:298:166:132:4929:6076	0/1:-197.563,0,-219.255:158:82:76:2870:3106	.	.	.	1/1:-498.592,-46.6597,0:155:0:155:5836:0	.	0/1:-250.084,0,-223.298:179:85:94:3538:3211
+chr18	32455379	.	T	C	2891.35	.	AB=0.528736;ABP=4.88226;AC=3;AF=0.5;AN=6;AO=138;CIGAR=1X;DP=721;DPB=261;DPRA=0;EPP=21.2003;EPPR=35.653;GTI=0;LEN=1;MEANALT=1;MQM=41.587;MQMR=41.9837;NS=1;NUMALT=1;ODDS=689.417;PAIRED=0.985507;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=5167;QR=4608;RO=123;RPL=117;RPP=148.027;RPPR=97.0898;RPR=21;RUN=1;SAF=65;SAP=4.01736;SAR=73;SF=17,20,23;SRF=58;SRP=3.87536;SRR=65;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-365.725,0,-319.69:261:123:138:5167:4608	.	.	0/1:-373.793,0,-287.234:252:113:139:5217:4273:113,139	.	.	0/1:-192.142,0,-368.69:208:131:77:2952:5000	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr18	32459615	.	G	A	2530.56	.	AB=0.395522;ABP=28.4198;AC=1;AF=0.5;AN=2;AO=106;CIGAR=1X;DP=268;DPB=268;DPRA=0;EPP=3.0103;EPPR=4.9405;GTI=0;LEN=1;MEANALT=1;MQM=41.9623;MQMR=41.7716;NS=1;NUMALT=1;ODDS=582.683;PAIRED=0.971698;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3970;QR=5856;RO=162;RPL=61;RPP=8.25461;RPPR=3.0103;RPR=45;RUN=1;SAF=50;SAP=3.74778;SAR=56;SF=29;SRF=78;SRP=3.49285;SRR=84;TYPE=snp	GT:GL:DP:RO:AO:QA:QR	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-262.848,0,-427.245:268:162:106:3970:5856	.	.	.	.	.	.	.
+chr18	32470291	.	G	A	2457.45	.	AB=0;ABP=0;AC=24;AF=1;AN=42;AO=143;CIGAR=1X;DP=3524;DPB=143;DPRA=0;EPP=9.70694;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=41.986;MQMR=0;NS=1;NUMALT=1;ODDS=202.845;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=5266;QR=0;RO=0;RPL=32;RPP=97.7806;RPPR=0;RPR=111;RUN=1;SAF=98;SAP=45.6653;SAR=45;SF=0,1,3,6,8,9,10,12,15,16,18,20,21,23,25,26,27,29,32,34,35;SRF=0;SRP=0;SRR=0;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	1/1:-456.142,-43.0473,0:143:0:143:5266:0:0,143	0/1:-61.0044,0,-70.1348:52:28:23:883:985	.	0/1:-143.668,0,-257.026:155:95:60:2193:3538:95,60	.	.	0/1:-168.91,0,-142.584:121:57:64:2365:2053:57,64	.	0/1:-193.843,0,-160.381:139:64:75:2717:2326	0/1:-168.88,0,-226.911:152:85:67:2477:3136:85,67	0/1:-193.799,0,-173.361:142:68:74:2731:2498:68,74	.	0/1:-312.461,0,-243.01:215:97:118:4377:3541:97,118	.	.	0/1:-302.369,0,-259.715:223:103:120:4310:3774	0/1:-207.699,0,-186.402:153:73:80:2937:2689:73,80	.	0/1:-142.732,0,-138.71:109:55:54:2029:1964	.	0/1:-235.954,0,-248.603:191:97:94:3381:3533:97,94	0/1:-54.4349,0,-177.398:93:66:27:945:2351:66,27	.	0/1:-248.591,0,-211.49:179:84:94:3496:3056	.	0/1:-367.244,0,-325.109:270:129:140:5188:4671:129,140	1/1:-811.224,-80.594,0:273:1:271:9473:15	0/1:-259.011,0,-342.436:243:133:107:3880:4784:133,107	.	0/1:-412.838,0,-383.09:320:155:165:5915:5520	.	.	1/1:-426.89,-32.3744,0:140:3:137:5062:108	.	0/1:-156.638,0,-210.171:139:78:61:2289:2899	0/1:-104.427,0,-77.7914:72:32:40:1453:1139	.
+chr19	16590094	.	A	G	2696.33	.	AB=0.534314;ABP=5.09662;AC=1;AF=0.5;AN=2;AO=109;CIGAR=1X;DP=204;DPB=204;DPRA=0;EPP=3.50834;EPPR=3.58174;GTI=0;LEN=1;MEANALT=1;MQM=41.8073;MQMR=41.7368;NS=1;NUMALT=1;ODDS=507.322;PAIRED=0.981651;PAIREDR=0.989474;PAO=0;PQA=0;PQR=0;PRO=0;QA=4017;QR=3468;RO=95;RPL=71;RPP=24.7051;RPPR=19.6735;RPR=38;RUN=1;SAF=25;SAP=72.358;SAR=84;SF=13;SRF=17;SRP=88.0634;SRR=78;TYPE=snp	GT:GL:DP:RO:AO:QA:QR	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-285.926,0,-237.881:204:95:109:4017:3468	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr19	16591464	.	G	A	4112.24	.	AB=0.51087;ABP=3.19912;AC=55;AF=0.5;AN=70;AO=94;CIGAR=1X;DP=6325;DPB=184;DPRA=0;EPP=3.0103;EPPR=6.48466;GTI=0;LEN=1;MEANALT=1;MQM=41.7553;MQMR=41.8444;NS=1;NUMALT=1;ODDS=491.677;PAIRED=1;PAIREDR=0.955556;PAO=0;PQA=0;PQR=0;PRO=0;QA=3384;QR=3179;RO=90;RPL=58;RPP=14.1911;RPPR=3.39634;RPR=36;RUN=1;SAF=61;SAP=21.1213;SAR=33;SF=0,1,2,3,4,5,6,7,8,9,11,12,13,14,15,16,17,18,19,20,21,22,23,24,25,26,28,29,30,31,32,33,34,35,36;SRF=54;SRP=10.8276;SRR=36;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	0/1:-237.073,0,-221.172:184:90:94:3384:3179:90,94	1/1:-250.721,-23.7814,0:80:0:79:2893:0	0/1:-161.594,0,-217.003:157:86:70:2408:3029	1/1:-600.419,-57.4967,0:192:0:191:6946:0:0,191	0/1:-251.804,0,-282.296:211:111:100:3686:4013	1/1:-569.285,-55.0885,0:183:0:183:6731:0:0,183	0/1:-174.786,0,-162.936:136:66:70:2517:2361:66,70	0/1:-257.052,0,-262.614:208:106:102:3758:3756	1/1:-338.75,-32.5112,0:108:0:108:3940:0	0/1:-217.457,0,-222.614:181:90:90:3147:3219:90,90	.	1/1:-825.951,-80.676,0:268:0:268:9618:0	0/1:-323.004,0,-303.704:251:125:126:4619:4355:125,126	0/1:-389.022,0,-277.345:274:121:151:5463:4179	1/1:-478.612,-43.2122,0:156:1:154:5618:39	0/1:-202.119,0,-224.099:177:91:84:3005:3188	1/1:-484.602,-45.1545,0:150:0:150:5658:0:0,150	1/1:-813.786,-76.1606,0:254:0:253:9446:0	0/1:-134.372,0,-184.122:130:75:54:2016:2594	0/1:-221.901,0,-207.584:175:85:90:3195:3026	1/1:-574.936,-53.6909,0:184:1:183:6695:17:1,183	0/1:-225.918,0,-40.401:107:23:84:3002:828:23,84	1/1:-384.192,-35.465,0:128:1:127:4494:31	1/1:-605.462,-57.7978,0:192:0:192:6996:0	0/1:-122.925,0,-111.758:97:46:51:1777:1613:46,51	1/1:-999.573,-96.6306,0:323:0:321:11655:0:0,321	1/1:-701.352,-67.3983,0:229:1:228:8174:16	.	1/1:-523.567,-51.4761,0:172:0:171:6027:0	0/1:-336.041,0,-367.59:287:149:136:4955:5223	1/1:-625.393,-60.206,0:201:0:200:7210:0	1/1:-489.907,-47.5627,0:158:0:158:5687:0	1/1:-466.507,-44.2514,0:148:0:147:5409:0	0/1:-182.346,0,-177.766:145:72:73:2625:2550	1/1:-531.245,-51.7772,0:172:0:172:6184:0	1/1:-385.269,-36.4246,0:121:0:121:4451:0	1/1:-570.101,-55.9916,0:186:0:186:6663:0
+chr19	16593415	.	G	A	7720.62	.	AB=0.456395;ABP=8.69148;AC=55;AF=0.5;AN=70;AO=157;CIGAR=1X;DP=11781;DPB=344;DPRA=0;EPP=19.9533;EPPR=28.9389;GTI=0;LEN=1;MEANALT=3;MQM=41.9873;MQMR=41.7838;NS=1;NUMALT=1;ODDS=896.061;PAIRED=1;PAIREDR=0.989189;PAO=0;PQA=0;PQR=0;PRO=0;QA=5863;QR=6506;RO=185;RPL=110;RPP=57.9057;RPPR=69.0348;RPR=47;RUN=1;SAF=73;SAP=4.68386;SAR=84;SF=0,1,2,3,4,5,6,7,8,9,11,12,13,14,15,16,17,18,19,20,21,22,23,24,25,26,28,29,30,31,32,33,34,35,36;SRF=85;SRP=5.65128;SRR=100;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	0/1:-404.08,0,-462.248:344:185:157:5863:6506:185,157	1/1:-512.82,-48.4658,0:161:0:161:5945:0	0/1:-361.537,0,-453.315:323:176:147:5322:6339	1/1:-806.172,-69.979,0:256:2:253:9457:77:2,253	0/1:-630.608,0,-560.757:467:222:244:8922:8086	1/1:-1484.08,-137.978,0:463:1:462:17185:14:1,462	0/1:-413.303,0,-265.462:272:113:159:5717:4005:113,159	0/1:-470.879,0,-555.45:404:218:186:6904:7807	1/1:-743.581,-70.7421,0:235:0:235:8602:0	0/1:-372.064,0,-348.309:281:139:141:5307:4980:139,141	.	1/1:-1325.03,-124.42,0:423:2:420:15354:29	0/1:-646.218,0,-704.761:530:274:253:9302:10017:274,253	0/1:-488.233,0,-508.293:399:204:194:7032:7217	1/1:-887.835,-83.3853,0:277:0:277:10275:0	0/1:-474.198,0,-425.437:363:171:192:6762:6190	1/1:-1135.08,-104.443,0:357:2:353:13179:27:2,353	1/1:-1334.61,-125.985,0:423:1:422:15481:14	0/1:-314.253,0,-297.486:238:118:120:4466:4295	0/1:-463.677,0,-418.171:345:167:177:6586:6010	1/1:-1311.42,-123.121,0:409:0:409:15190:0:0,409	0/1:-346.714,0,-98.5009:177:48:129:4608:1740:48,129	1/1:-524.758,-51.1751,0:171:0:170:6092:0	1/1:-1383.19,-131.249,0:437:0:436:16013:0	0/1:-315.678,0,-217.463:205:87:116:4386:3212:87,116	1/1:-1625.44,-154.543,0:520:1:517:18842:16:1,517	1/1:-1266.65,-124.024,0:415:0:412:14704:0	.	1/1:-830.959,-81.8802,0:273:0:272:9587:0	0/1:-698.054,0,-534.665:509:232:276:9826:7972	1/1:-944.347,-88.8039,0:295:0:295:10938:0	1/1:-803.488,-76.7627,0:257:0:255:9282:0	1/1:-1038.9,-97.8348,0:326:0:325:12016:0	0/1:-379.813,0,-343.05:284:136:146:5388:4947	1/1:-1059.85,-99.6409,0:331:0:331:12262:0	1/1:-774.684,-72.5482,0:241:0:241:8954:0	1/1:-1144.87,-107.613,0:370:1:368:13314:39
+chr19	16593573	.	G	A	6999.69	.	AB=0.489614;ABP=3.32603;AC=12;AF=0.5;AN=20;AO=165;CIGAR=1X;DP=4298;DPB=337;DPRA=0;EPP=3.02346;EPPR=6.24226;GTI=0;LEN=1;MEANALT=1;MQM=41.5273;MQMR=41.6686;NS=1;NUMALT=1;ODDS=955.077;PAIRED=0.987879;PAIREDR=0.994186;PAO=0;PQA=0;PQR=0;PRO=0;QA=6135;QR=6199;RO=172;RPL=64;RPP=21.0269;RPPR=48.4597;RPR=101;RUN=1;SAF=103;SAP=25.133;SAR=62;SF=0,2,4,9,10,12,13,18,27,29;SRF=110;SRP=32.0979;SRR=62;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	0/1:-425.83,0,-435.7:337:172:165:6135:6199:172,165	.	0/1:-319.301,0,-487.336:322:190:132:4827:6789	.	0/1:-595.144,0,-654.071:483:253:229:8603:9215	.	.	.	.	0/1:-415.571,0,-368.314:306:146:160:5902:5322:146,160	1/1:-1102.56,-103.253,0:343:0:343:12783:0:0,343	.	0/1:-732.801,0,-673.477:544:262:280:10408:9654:262,280	0/1:-646.56,0,-681.903:519:270:248:9319:9668	.	.	.	.	0/1:-340.396,0,-274.276:237:109:128:4762:3975	.	.	.	.	.	.	.	.	1/1:-1724.87,-162.422,0:546:1:543:20027:15:1,543	.	0/1:-830.048,0,-847.072:661:337:323:11935:12078	.	.	.	.	.	.	.
+chr19	16601168	.	G	A	4509.61	.	AB=0.44918;ABP=9.85222;AC=11;AF=0.5;AN=20;AO=137;CIGAR=1X;DP=3556;DPB=305;DPRA=0;EPP=44.2366;EPPR=13.9457;GTI=0;LEN=1;MEANALT=2;MQM=41.7518;MQMR=41.7784;NS=1;NUMALT=1;ODDS=772.683;PAIRED=1;PAIREDR=0.994012;PAO=0;PQA=0;PQR=0;PRO=0;QA=5149;QR=6137;RO=167;RPL=47;RPP=32.3173;RPPR=48.2731;RPR=90;RUN=1;SAF=84;SAP=18.2423;SAR=53;SF=0,2,4,9,10,12,13,21,27,29;SRF=111;SRP=42.3439;SRR=56;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	0/1:-351.73,0,-440.56:305:167:137:5149:6137:167,137	.	0/1:-323.928,0,-383.006:278:149:129:4736:5371	.	0/1:-498.968,0,-671.86:449:254:194:7344:9316	.	.	.	.	0/1:-330.875,0,-408.731:286:156:130:4838:5718:156,130	0/1:-388.223,0,-382.413:295:147:148:5515:5428:147,148	.	0/1:-455.408,0,-683.963:439:259:180:6813:9433:259,180	0/1:-456.935,0,-707.1:452:265:187:6851:9723	.	.	.	.	.	.	.	0/1:-67.2486,0,-369.709:173:137:36:1379:4844:137,36	.	.	.	.	.	1/1:-1223.18,-114.09,0:379:0:379:14152:0:0,379	.	0/1:-605.518,0,-641.467:500:259:241:8770:9193	.	.	.	.	.	.	.
+chr19	16601194	.	C	T	9745.48	.	AB=0.553806;ABP=12.591;AC=55;AF=0.5;AN=70;AO=211;CIGAR=1X;DP=14314;DPB=381;DPRA=0;EPP=3.8439;EPPR=16.0902;GTI=0;LEN=1;MEANALT=1;MQM=41.8246;MQMR=41.8;NS=1;NUMALT=1;ODDS=969.177;PAIRED=0.995261;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=7683;QR=6338;RO=170;RPL=81;RPP=27.7198;RPPR=13.0246;RPR=130;RUN=1;SAF=134;SAP=36.4469;SAR=77;SF=0,1,2,3,4,5,6,7,8,9,11,12,13,14,15,16,17,18,19,20,21,22,23,24,25,26,28,29,30,31,32,33,34,35,36;SRF=108;SRP=30.0387;SRR=62;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	0/1:-551.006,0,-433.925:381:170:211:7683:6338:170,211	1/1:-582.953,-55.3895,0:184:0:184:6722:0	0/1:-516.497,0,-409.067:361:163:197:7199:5994	1/1:-1268.85,-119.509,0:398:0:397:14675:0:0,397	0/1:-691.43,0,-695.362:531:262:268:9829:9888	1/1:-1781.93,-169.48,0:565:0:563:20596:0:0,563	0/1:-506.364,0,-396.305:349:155:194:7053:5776:155,194	0/1:-690.93,0,-610.857:504:236:267:9728:8811	1/1:-1027.11,-97.2327,0:325:0:323:11879:0	0/1:-401.998,0,-411.167:316:158:158:5737:5849:158,158	.	1/1:-1685.42,-164.171,0:552:1:551:19465:20	0/1:-818.833,0,-584.019:544:232:311:11347:8645:232,311	0/1:-738.608,0,-588.355:518:231:284:10329:8595	1/1:-1101.64,-105.361,0:352:0:350:12721:0	0/1:-560.315,0,-464.846:402:184:218:7889:6767	1/1:-1484.8,-140.28,0:467:0:466:17211:0:0,466	1/1:-1854.14,-175.5,0:583:0:583:21419:0	0/1:-311.287,0,-313.521:241:121:120:4420:4450	0/1:-585.34,0,-521.582:427:203:224:8250:7514	1/1:-1547.77,-144.545,0:489:2:487:17981:28:2,487	0/1:-430.813,0,-71.988:202:41:161:5647:1526:41,161	1/1:-688.229,-67.4307,0:225:0:224:7907:0	1/1:-1693.31,-159.245,0:530:0:529:19639:0	0/1:-186.729,0,-339.496:200:123:77:2844:4618:123,77	1/1:-2067.48,-194.944,0:664:2:661:23959:52:2,661	1/1:-1827.07,-175.884,0:603:2:601:21121:74	.	1/1:-983.33,-96.0286,0:320:0:319:11357:0	0/1:-825.878,0,-746.388:626:300:326:11722:10818	1/1:-1026.45,-97.5337,0:324:0:324:11820:0	1/1:-1038.21,-95.0886,0:339:2:336:12071:75	1/1:-1342.59,-129.744,0:431:0:431:15665:0	0/1:-416.726,0,-402.29:316:154:162:5909:5740	1/1:-1095.32,-103.253,0:343:0:343:12633:0	1/1:-905.568,-85.7936,0:285:0:285:10452:0	1/1:-1312.37,-123.096,0:417:1:413:15185:17
+chr19	35524824	.	T	C	7742.56	.	AB=0;ABP=0;AC=39;AF=1;AN=60;AO=414;CIGAR=1X;DP=12720;DPB=414;DPRA=0;EPP=15.095;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=41.6594;MQMR=0;NS=1;NUMALT=1;ODDS=578.531;PAIRED=0.992754;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=15253;QR=0;RO=0;RPL=218;RPP=5.54893;RPPR=0;RPR=196;RUN=1;SAF=189;SAP=9.80795;SAR=225;SF=0,1,2,3,6,7,8,9,10,11,12,14,15,16,18,19,20,21,22,23,25,26,27,28,29,32,33,34,35,36;SRF=0;SRP=0;SRR=0;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	1/1:-1317.29,-124.626,0:414:0:414:15253:0:0,414	0/1:-144.661,0,-211.151:139:79:60:2145:2920	0/1:-605.332,0,-630.167:499:253:245:8775:9106	0/1:-454.869,0,-607.202:415:228:185:6737:8479:228,185	.	.	0/1:-399.516,0,-568.897:380:214:165:5943:7887:214,165	0/1:-811.109,0,-784.024:627:306:319:11536:11275	0/1:-408.773,0,-508.447:361:193:166:6021:7157	0/1:-470.16,0,-466.832:365:180:185:6713:6672:180,185	1/1:-1281.09,-120.004,0:412:1:409:14881:39:1,409	0/1:-604.493,0,-682.844:518:267:248:8740:9733	1/1:-1889.13,-181.428,0:612:2:609:21985:51:2,609	.	0/1:-516.299,0,-523.168:403:204:199:7354:7497	0/1:-671.304,0,-609.77:506:238:266:9514:8861	0/1:-527.495,0,-455.649:383:178:205:7474:6672:178,205	.	0/1:-310.231,0,-520.157:320:191:129:4699:7136	0/1:-689.142,0,-561.49:489:220:268:9669:8200	0/1:-658.44,0,-821.745:570:309:260:9602:11520:309,260	0/1:-260.552,0,-321.273:231:125:105:3813:4515:125,105	0/1:-269.367,0,-311.516:230:122:107:3904:4385	1/1:-1434.12,-134.259,0:447:0:446:16571:0	.	1/1:-2066.4,-196.239,0:659:1:656:23912:17:1,656	0/1:-551.076,0,-621.672:483:251:228:8006:8875	0/1:-663.81,0,-710.126:552:279:271:9616:10146:279,271	0/1:-405.894,0,-324.058:293:131:162:5669:4758	1/1:-1947.55,-193.522,0:650:1:647:22670:17	.	.	1/1:-1247.56,-116.173,0:397:1:396:14438:34	1/1:-1036.35,-97.8348,0:325:0:325:11943:0	0/1:-539.573,0,-449.7:376:172:204:7535:6509	1/1:-730.847,-67.038,0:229:1:228:8475:19	0/1:-548.787,0,-549.265:435:213:220:7890:7908
+chr19	35524939	.	C	A	7570.23	.	AB=0;ABP=0;AC=17;AF=1;AN=28;AO=404;CIGAR=1X;DP=7017;DPB=405;DPRA=0;EPP=14.3837;EPPR=5.18177;GTI=0;LEN=1;MEANALT=1;MQM=41.7698;MQMR=42;NS=1;NUMALT=1;ODDS=558.448;PAIRED=0.99505;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=14943;QR=16;RO=1;RPL=201;RPP=3.0318;RPPR=5.18177;RPR=203;RUN=1;SAF=214;SAP=6.10626;SAR=190;SF=0,3,6,8,12,16,18,20,21,23,25,26,29,32;SRF=1;SRP=5.18177;SRR=0;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	1/1:-1287.11,-120.318,0:405:1:404:14943:16:1,404	.	.	0/1:-403.858,0,-683.979:424:254:170:6225:9388:254,170	.	.	0/1:-412.017,0,-681.842:424:252:172:6236:9352:252,172	.	0/1:-440.901,0,-513.941:375:198:176:6442:7243	.	.	.	0/1:-859.015,0,-969.238:710:371:338:12469:13759:371,338	.	.	.	0/1:-622.932,0,-626.577:490:241:248:8970:8979:241,248	.	0/1:-348.685,0,-410.004:295:157:138:5047:5773	.	0/1:-680.281,0,-854.564:586:319:267:9969:11959:319,267	0/1:-125.989,0,-590.315:282:214:66:2428:7805:214,66	.	1/1:-1682.08,-159.546,0:531:0:530:19512:0	.	0/1:-874.983,0,-905.33:707:356:351:12639:12941:356,351	0/1:-738.07,0,-750.173:605:303:300:10669:10785	.	.	0/1:-790.315,0,-961.126:713:379:332:11658:13640	.	.	1/1:-1474.76,-132.239,0:470:5:465:17146:102	.	.	.	.
+chr19	35524944	.	G	C	7890.93	.	AB=0;ABP=0;AC=17;AF=1;AN=28;AO=433;CIGAR=1X;DP=7245;DPB=433;DPRA=0;EPP=9.15361;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=41.7898;MQMR=0;NS=1;NUMALT=1;ODDS=604.871;PAIRED=0.995381;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=15998;QR=0;RO=0;RPL=196;RPP=11.4404;RPPR=0;RPR=237;RUN=1;SAF=229;SAP=6.14464;SAR=204;SF=0,3,6,8,12,16,18,20,21,23,25,26,29,32;SRF=0;SRP=0;SRR=0;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	1/1:-1383.28,-130.346,0:433:0:433:15998:0:0,433	.	.	0/1:-426.315,0,-692.846:434:256:176:6508:9505:256,176	.	.	0/1:-442.13,0,-699.301:443:260:181:6634:9586:260,181	.	0/1:-455.348,0,-545.193:391:210:180:6634:7640	.	.	.	0/1:-871.262,0,-970.991:724:379:344:12628:13825:379,344	.	.	.	0/1:-627.901,0,-644.453:496:247:248:9016:9210:247,248	.	0/1:-357.859,0,-421.869:303:162:141:5171:5921	.	0/1:-720.654,0,-859.538:611:326:285:10475:12079:326,285	0/1:-137.056,0,-588.748:286:216:70:2568:7781:216,70	.	1/1:-1758.62,-166.771,0:555:0:554:20361:0	.	0/1:-905.305,0,-962.444:733:370:360:13032:13664:370,360	0/1:-748.846,0,-743.658:605:299:305:10788:10706	.	.	0/1:-845.552,0,-1011.3:749:397:350:12413:14328	.	.	1/1:-1513.34,-138.944,0:482:3:479:17530:68	.	.	.	.
+chr19	35530073	.	T	C	4539.89	.	AB=0.500986;ABP=3.01458;AC=7;AF=0.5;AN=14;AO=254;CIGAR=1X;DP=2569;DPB=507;DPRA=0;EPP=18.0909;EPPR=39.273;GTI=0;LEN=1;MEANALT=1;MQM=41.4646;MQMR=41.4111;NS=1;NUMALT=1;ODDS=1462.62;PAIRED=0.984252;PAIREDR=0.976285;PAO=0;PQA=0;PQR=0;PRO=0;QA=9284;QR=9450;RO=253;RPL=119;RPP=5.19887;RPPR=6.10873;RPR=135;RUN=1;SAF=137;SAP=6.42994;SAR=117;SF=2,4,16,21,24,28,34;SRF=117;SRP=6.10873;SRR=136;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	0/1:-644.63,0,-658.206:507:253:254:9284:9450	.	0/1:-663.496,0,-762.092:543:285:258:9584:10757	.	.	.	.	.	.	.	.	.	.	.	0/1:-602.542,0,-511.341:425:197:228:8430:7417:197,228	.	.	.	.	0/1:-96.9299,0,-349.541:172:125:47:1708:4646:125,47	.	.	0/1:-321.339,0,-292.957:237:113:124:4527:4229:113,124	.	.	.	0/1:-385.777,0,-340.811:283:134:149:5449:4974	.	.	.	.	.	0/1:-541.296,0,-514.347:402:195:207:7659:7352	.	.
+chr19	35530514	.	T	G	2353.33	.	AB=0.495833;ABP=3.04649;AC=5;AF=0.5;AN=10;AO=119;CIGAR=1X;DP=1072;DPB=240;DPRA=0;EPP=3.02855;EPPR=8.87328;GTI=0;LEN=1;MEANALT=2;MQM=40.8908;MQMR=41.9833;NS=1;NUMALT=1;ODDS=633.192;PAIRED=0.97479;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=4228;QR=4318;RO=120;RPL=27;RPP=80.1067;RPPR=96.8179;RPR=92;RUN=1;SAF=71;SAP=12.6633;SAR=48;SF=2,4,16,21,28;SRF=69;SRP=8.87328;SRR=51;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	0/1:-290.727,0,-303.428:240:120:119:4228:4318	.	0/1:-355.451,0,-501.342:338:192:146:5316:7024	.	.	.	.	.	.	.	.	.	.	.	0/1:-336.962,0,-297.037:252:119:133:4785:4329:119,133	.	.	.	.	0/1:-61.1175,0,-178.673:95:66:29:1044:2378:66,29	.	.	.	.	.	.	0/1:-207.193,0,-165.237:147:67:80:2892:2409	.	.	.	.	.	.	.	.
+chr19	35530525	.	C	A	2698.25	.	AB=0.512727;ABP=3.39722;AC=5;AF=0.5;AN=10;AO=141;CIGAR=1X;DP=1160;DPB=275;DPRA=0;EPP=4.87376;EPPR=3.41847;GTI=0;LEN=1;MEANALT=2;MQM=41.0355;MQMR=41.985;NS=1;NUMALT=1;ODDS=724.563;PAIRED=0.978723;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=5073;QR=4812;RO=133;RPL=41;RPP=56.6195;RPPR=115.486;RPR=100;RUN=1;SAF=82;SAP=11.1572;SAR=59;SF=2,4,16,21,28;SRF=76;SRP=8.9043;SRR=57;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	0/1:-351.742,0,-334.168:275:133:141:5073:4812	.	0/1:-396.046,0,-517.029:360:196:162:5852:7284	.	.	.	.	.	.	.	.	.	.	.	0/1:-352.575,0,-315.525:264:126:138:5028:4616:126,138	.	.	.	.	0/1:-71.9444,0,-175.726:98:67:31:1185:2357:67,31	.	.	.	.	.	.	0/1:-239.131,0,-168.066:163:69:94:3320:2501	.	.	.	.	.	.	.	.
+chr19	35530641	.	G	A	2253.18	.	AB=0.490291;ABP=3.17896;AC=1;AF=0.5;AN=2;AO=101;CIGAR=1X;DP=206;DPB=206;DPRA=0;EPP=16.4476;EPPR=8.98702;GTI=0;LEN=1;MEANALT=1;MQM=41.9802;MQMR=41.8;NS=1;NUMALT=1;ODDS=518.813;PAIRED=1;PAIREDR=0.990476;PAO=0;PQA=0;PQR=0;PRO=0;QA=3440;QR=3781;RO=105;RPL=70;RPP=35.7114;RPPR=28.3441;RPR=31;RUN=1;SAF=44;SAP=6.64375;SAR=57;SF=33;SRF=44;SRP=8.98702;SRR=61;TYPE=snp	GT:GL:DP:RO:AO:QA:QR	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-236.921,0,-266.512:206:105:101:3440:3781	.	.	.
+chr19	47109176	.	A	G	4363.66	.	AB=0.5;ABP=3.0103;AC=3;AF=0.5;AN=4;AO=131;CIGAR=1X;DP=444;DPB=262;DPRA=0;EPP=6.73993;EPPR=4.07933;GTI=0;LEN=1;MEANALT=2;MQM=41.7176;MQMR=41.7077;NS=1;NUMALT=1;ODDS=718.681;PAIRED=0.992366;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=4860;QR=4929;RO=130;RPL=113;RPP=152.61;RPPR=115.326;RPR=18;RUN=1;SAF=40;SAP=46.1248;SAR=91;SF=4,9;SRF=45;SRP=29.7361;SRR=85;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	0/1:-340.167,0,-344.92:262:130:131:4860:4929	.	.	.	.	1/1:-586.981,-54.7875,0:182:0:182:6804:0:0,182	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr19	47111591	.	G	T	22.49	.	AB=0.5;ABP=3.0103;AC=1;AF=0.5;AN=2;AO=2;CIGAR=1X;DP=4;DPB=4;DPRA=0;EPP=7.35324;EPPR=3.0103;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=42;NS=1;NUMALT=1;ODDS=4.31164;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=78;QR=73;RO=2;RPL=1;RPP=3.0103;RPPR=7.35324;RPR=1;RUN=1;SAF=1;SAP=3.0103;SAR=1;SF=31;SRF=1;SRP=3.0103;SRR=1;TYPE=snp	GT:GL:DP:RO:AO:QA:QR	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-5.87069,0,-5.50261:4:2:2:78:73	.	.	.	.	.
+chr19	47112261	.	C	G	231.23	.	AB=0.578947;ABP=4.03889;AC=1;AF=0.5;AN=2;AO=11;CIGAR=1X;DP=19;DPB=19;DPRA=0;EPP=3.20771;EPPR=12.7819;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=42;NS=1;NUMALT=1;ODDS=26.714;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=415;QR=289;RO=8;RPL=5;RPP=3.20771;RPPR=12.7819;RPR=6;RUN=1;SAF=11;SAP=26.8965;SAR=0;SF=32;SRF=8;SRP=20.3821;SRR=0;TYPE=snp	GT:GL:DP:RO:AO:QA:QR	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-30.569,0,-19.8615:19:8:11:415:289	.	.	.	.
+chr19	47112357	.	CCTCTCTCTCTG	CCTCTCTCTG	817.10	.	AB=0.425532;ABP=7.53805;AC=1;AF=0.5;AN=2;AO=40;CIGAR=1M2D9M;DP=94;DPB=92.75;DPRA=0;EPP=10.8276;EPPR=3.73412;GTI=0;LEN=2;MEANALT=4;MQM=41.9;MQMR=42;NS=1;NUMALT=1;ODDS=188.144;PAIRED=1;PAIREDR=1;PAO=7.5;PQA=195;PQR=151;PRO=5.5;QA=1388;QR=1676;RO=48;RPL=9;RPP=29.2851;RPPR=24.906;RPR=31;RUN=1;SAF=19;SAP=3.22745;SAR=21;SF=32;SRF=21;SRP=4.6389;SRR=27;TYPE=del	GT:GL:DP:RO:AO:QA:QR	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-91.1405,0,-112.819:94:48:40:1388:1676	.	.	.	.
+chr19	47258842	.	C	T	1985.65	.	AB=0.605839;ABP=16.3403;AC=13;AF=0.5;AN=24;AO=83;CIGAR=1X;DP=1655;DPB=137;DPRA=0;EPP=14.5479;EPPR=6.32897;GTI=0;LEN=1;MEANALT=2;MQM=41.9036;MQMR=41.9623;NS=1;NUMALT=1;ODDS=278.389;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2927;QR=1971;RO=53;RPL=60;RPP=38.8265;RPPR=9.93443;RPR=23;RUN=1;SAF=37;SAP=5.12945;SAR=46;SF=0,2,3,10,12,19,21,28,31,33,34,36;SRF=21;SRP=7.96781;SRR=32;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	0/1:-213.469,0,-129.897:137:53:83:2927:1971:53,83	.	0/1:-209.092,0,-142.823:152:65:86:2934:2189	0/1:-209.383,0,-113.812:131:50:80:2878:1761:50,80	.	.	.	.	.	.	1/1:-503.318,-45.7701,0:164:2:162:5862:38:2,162	.	0/1:-260.689,0,-177.252:177:77:100:3624:2671:77,100	.	.	.	.	.	.	0/1:-163.612,0,-115.908:118:48:67:2312:1740	.	0/1:-42.4548,0,-150.646:82:58:23:767:2004:58,23	.	.	.	.	.	.	0/1:-131.539,0,-108.982:104:49:55:1891:1634	.	.	0/1:-200.221,0,-147.22:146:63:79:2791:2185	.	0/1:-240.25,0,-170.471:166:69:97:3327:2551	0/1:-154.899,0,-127.745:115:52:62:2189:1867	.	0/1:-174.139,0,-213.518:163:86:76:2592:3083
+chr19	47259117	.	C	A	12.97	.	AB=0.333333;ABP=4.45795;AC=1;AF=0.5;AN=2;AO=2;CIGAR=1X;DP=6;DPB=6;DPRA=0;EPP=3.0103;EPPR=3.0103;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=42;NS=1;NUMALT=1;ODDS=2.3028;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=75;QR=82;RO=4;RPL=0;RPP=7.35324;RPPR=11.6962;RPR=2;RUN=1;SAF=1;SAP=3.0103;SAR=1;SF=34;SRF=2;SRP=3.0103;SRR=2;TYPE=snp	GT:GL:DP:RO:AO:QA:QR	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-5.06723,0,-5.68624:6:4:2:75:82	.	.
+chr19	47259134	.	C	A	425.37	.	AB=0.818182;ABP=22.3561;AC=2;AF=0.5;AN=4;AO=18;CIGAR=1X;DP=50;DPB=22;DPRA=0;EPP=3.0103;EPPR=3.0103;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=42;NS=1;NUMALT=1;ODDS=1.13811;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=649;QR=144;RO=4;RPL=12;RPP=7.35324;RPPR=11.6962;RPR=6;RUN=1;SAF=9;SAP=3.0103;SAR=9;SF=11,36;SRF=2;SRP=3.0103;SRR=2;TYPE=snp	GT:GL:DP:RO:AO:QA:QR	.	.	.	.	.	.	.	.	.	.	.	0/1:-49.7773,0,-6.32023:22:4:18:649:144	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-49.0965,0,-15.3845:28:8:20:658:268
+chr19	47259135	.	G	A	13.87	.	AB=0.333333;ABP=4.45795;AC=1;AF=0.5;AN=2;AO=2;CIGAR=1X;DP=6;DPB=6;DPRA=0;EPP=3.0103;EPPR=3.0103;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=42;NS=1;NUMALT=1;ODDS=3.15171;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=77;QR=145;RO=4;RPL=0;RPP=7.35324;RPPR=3.0103;RPR=2;RUN=1;SAF=1;SAP=3.0103;SAR=1;SF=18;SRF=2;SRP=3.0103;SRR=2;TYPE=snp	GT:GL:DP:RO:AO:QA:QR	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-5.20298,0,-11.2162:6:4:2:77:145	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr19	47259469	.	C	A	31.68	.	AB=0.666667;ABP=3.73412;AC=1;AF=0.5;AN=2;AO=2;CIGAR=1X;DP=3;DPB=3;DPRA=0;EPP=3.0103;EPPR=5.18177;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=40;NS=1;NUMALT=1;ODDS=2.52364;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=71;QR=32;RO=1;RPL=0;RPP=7.35324;RPPR=5.18177;RPR=2;RUN=1;SAF=1;SAP=3.0103;SAR=1;SF=34;SRF=1;SRP=5.18177;SRR=0;TYPE=snp	GT:GL:DP:RO:AO:QA:QR	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-5.66789,0,-2.23306:3:1:2:71:32	.	.
+chr19	49661071	.	C	A	29.63	.	AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X;DP=2;DPB=2;DPRA=0;EPP=3.0103;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=0;NS=1;NUMALT=1;ODDS=6.81976;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=44;QR=0;RO=0;RPL=0;RPP=7.35324;RPPR=0;RPR=2;RUN=1;SAF=1;SAP=3.0103;SAR=1;SF=3;SRF=0;SRP=0;SRR=0;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	1/1:-4.1659,-0.60206,0:2:0:2:44:0:0,2	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr19	49661112	.	G	A	1302.70	.	AB=0.785714;ABP=52.644;AC=15;AF=0.5;AN=26;AO=55;CIGAR=1X;DP=1004;DPB=70;DPRA=0;EPP=7.78754;EPPR=4.51363;GTI=0;LEN=1;MEANALT=3;MQM=40.7273;MQMR=41.8462;NS=1;NUMALT=1;ODDS=14.5505;PAIRED=0.945455;PAIREDR=0.769231;PAO=0;PQA=0;PQR=0;PRO=0;QA=1960;QR=447;RO=13;RPL=28;RPP=3.04978;RPPR=16.5402;RPR=27;RUN=1;SAF=33;SAP=7.78754;SAR=22;SF=2,6,7,9,15,17,20,24,25,29,32,34,35;SRF=8;SRP=4.51363;SRR=5;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	0/1:-148.924,0,-18.9217:70:13:55:1960:447	.	.	.	0/1:-54.2783,0,-33.8355:36:15:21:763:509:15,21	1/1:-416.322,-41.2411,0:137:0:137:4829:0	.	0/1:-107.206,0,-90.6794:81:37:43:1510:1315:37,43	.	.	.	.	.	0/1:-92.0924,0,-59.796:60:24:36:1261:892	.	0/1:-73.2615,0,-96.9249:67:38:29:1070:1338	.	.	1/1:-434.007,-41.0788,0:145:2:142:5022:26:2,142	.	.	.	0/1:-43.6058,0,-12.8841:23:6:17:588:224:6,17	0/1:-115.084,0,-185.24:119:71:48:1728:2531:71,48	.	.	.	0/1:-126.94,0,-137.912:106:56:50:1821:1943	.	.	0/1:-63.8767,0,-72.8713:57:29:28:993:1029	.	0/1:-93.6309,0,-73.225:70:31:39:1311:1092	0/1:-22.6081,0,-57.2001:33:23:10:370:798	.
+chr19	49661439	.	C	T	5081.78	.	AB=0.501211;ABP=3.01556;AC=1;AF=0.5;AN=2;AO=207;CIGAR=1X;DP=413;DPB=413;DPRA=0;EPP=6.79726;EPPR=3.17896;GTI=0;LEN=1;MEANALT=1;MQM=41.3527;MQMR=41.5922;NS=1;NUMALT=1;ODDS=1143.52;PAIRED=0.990338;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=7584;QR=7445;RO=206;RPL=50;RPP=123.113;RPPR=125.962;RPR=157;RUN=1;SAF=114;SAP=7.63648;SAR=93;SF=27;SRF=126;SRP=25.3153;SRR=80;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-527.835,0,-518.013:413:206:207:7584:7445:206,207	.	.	.	.	.	.	.	.	.
+chr19	49661547	.	A	G	2571.03	.	AB=0.517094;ABP=3.60421;AC=15;AF=0.5;AN=30;AO=121;CIGAR=1X;DP=3492;DPB=234;DPRA=0;EPP=3.17181;EPPR=10.7656;GTI=0;LEN=1;MEANALT=2;MQM=41.9669;MQMR=41.9643;NS=1;NUMALT=1;ODDS=616.732;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=4312;QR=4053;RO=112;RPL=88;RPP=57.2971;RPPR=47.6806;RPR=33;RUN=1;SAF=49;SAP=12.5038;SAR=72;SF=0,3,6,10,13,17,19,21,23,27,31,32,34,35,36;SRF=40;SRP=22.8638;SRR=72;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	0/1:-305.873,0,-281.91:234:112:121:4312:4053:112,121	.	.	0/1:-253.41,0,-360.048:241:138:103:3740:5014:138,103	.	.	0/1:-219.821,0,-280.275:204:112:92:3218:3939:112,92	.	.	.	0/1:-397.171,0,-299.069:281:125:155:5549:4451:125,155	.	.	0/1:-322.331,0,-373.22:280:148:130:4670:5298	.	.	.	0/1:-327.408,0,-288.171:252:118:132:4637:4187	.	0/1:-384.618,0,-370.924:305:149:156:5475:5327	.	0/1:-50.9037,0,-206.936:108:80:28:951:2765:80,28	.	0/1:-342.112,0,-360.548:277:141:136:4898:5171	.	.	.	0/1:-375.82,0,-437.52:344:182:162:5540:6271:182,162	.	.	.	0/1:-188.44,0,-183.708:157:79:78:2698:2640	0/1:-242.222,0,-271.307:204:108:96:3491:3822	.	0/1:-221.539,0,-271.921:197:105:91:3231:3812	0/1:-108.588,0,-220.5:133:83:50:1700:2996	0/1:-339.889,0,-327.105:275:134:138:4837:4730
+chr19	49661582	.	T	C	4080.73	.	AB=0;ABP=0;AC=59;AF=1;AN=72;AO=151;CIGAR=1X;DP=6494;DPB=151;DPRA=0;EPP=4.75035;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=41.947;MQMR=0;NS=1;NUMALT=1;ODDS=213.936;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=5460;QR=0;RO=0;RPL=115;RPP=92.7597;RPPR=0;RPR=36;RUN=1;SAF=45;SAP=56.5206;SAR=106;SF=0,2,3,4,5,6,7,8,9,10,11,12,13,14,15,16,17,18,19,20,21,22,23,24,25,26,27,28,29,30,31,32,33,34,35,36;SRF=0;SRP=0;SRR=0;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	1/1:-474.765,-45.4555,0:151:0:151:5460:0:0,151	.	1/1:-660.475,-65.3235,0:217:0:217:7588:0	0/1:-187.611,0,-246.725:170:96:74:2749:3450:96,74	0/1:-312.928,0,-299.553:243:120:123:4444:4281	1/1:-830.538,-78.5124,0:270:1:268:9605:27:1,268	1/1:-399.2,-39.1339,0:130:0:130:4604:0:0,130	0/1:-270.484,0,-426.247:283:167:115:4083:5892	0/1:-176.267,0,-202.469:151:79:72:2547:2848	0/1:-209.698,0,-238.588:178:93:83:3023:3350:93,83	1/1:-584.157,-56.2926,0:187:0:187:6765:0:0,187	0/1:-279.779,0,-305.765:243:126:116:4047:4339	1/1:-841.608,-77.2782,0:273:3:270:9754:110:3,270	0/1:-194.622,0,-243.865:181:99:79:2855:3457	0/1:-194.189,0,-217.188:161:83:78:2789:3055	1/1:-613.461,-56.5433,0:204:2:202:7120:53	1/1:-558.561,-53.8844,0:179:0:179:6440:0:0,179	1/1:-510.231,-49.0679,0:165:0:163:5872:0	1/1:-428.422,-38.6114,0:139:1:137:4975:32	1/1:-574.513,-55.3895,0:184:0:184:6612:0	1/1:-591.009,-57.4967,0:191:0:191:6865:0:0,191	0/1:-148.421,0,-28.7391:73:17:56:1951:575:17,56	0/1:-129.349,0,-73.4478:85:34:51:1771:1129	1/1:-580.714,-55.0885,0:183:0:183:6733:0	1/1:-207.103,-20.7711,0:69:0:69:2376:0:0,69	1/1:-906.755,-88.2018,0:295:0:293:10450:0:0,293	0/1:-301.282,0,-297.39:251:124:126:4329:4269	0/1:-253.884,0,-305.236:237:126:110:3741:4391:126,110	1/1:-366.543,-36.7257,0:122:0:122:4205:0	1/1:-915.099,-92.1152,0:307:0:306:10504:0	0/1:-149.856,0,-210.708:148:82:65:2226:2926	1/1:-313.888,-31.0061,0:104:0:103:3604:0	1/1:-414.519,-38.8329,0:129:0:129:4774:0	1/1:-542.736,-51.8333,0:178:1:176:6253:16	1/1:-441.636,-42.4452,0:141:0:141:5094:0	1/1:-271.537,-26.4906,0:88:0:88:3118:0	1/1:-564.885,-55.3895,0:184:0:184:6493:0
+chr19	49671281	.	G	A	3233.84	.	AB=0.54717;ABP=10.1803;AC=5;AF=0.5;AN=10;AO=203;CIGAR=1X;DP=1502;DPB=371;DPRA=0;EPP=3.87675;EPPR=3.0233;GTI=0;LEN=1;MEANALT=2;MQM=39.1576;MQMR=40.3054;NS=1;NUMALT=1;ODDS=837.171;PAIRED=0.960591;PAIREDR=0.958084;PAO=0;PQA=0;PQR=0;PRO=0;QA=6910;QR=5934;RO=167;RPL=146;RPP=87.7405;RPPR=125.354;RPR=57;RUN=1;SAF=81;SAP=20.9918;SAR=122;SF=2,3,7,21,22;SRF=65;SRP=20.8112;SRR=102;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	0/1:-455.079,0,-386.084:371:167:203:6910:5934	0/1:-368.202,0,-380.518:318:160:156:5698:5730:160,156	.	.	.	0/1:-621.493,0,-615.048:525:262:262:9304:9200	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-95.4181,0,-253.856:142:97:45:1583:3396:97,45	0/1:-164.027,0,-149.542:146:72:74:2591:2525	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr19	49671503	.	C	T	1546.79	.	AB=0.486842;ABP=3.23888;AC=1;AF=0.5;AN=2;AO=74;CIGAR=1X;DP=152;DPB=152;DPRA=0;EPP=3.0103;EPPR=3.26411;GTI=0;LEN=1;MEANALT=2;MQM=40.6216;MQMR=41.974;NS=1;NUMALT=1;ODDS=356.161;PAIRED=0.972973;PAIREDR=0.974026;PAO=0;PQA=0;PQR=0;PRO=0;QA=2539;QR=2794;RO=77;RPL=10;RPP=88.5781;RPPR=82.2267;RPR=64;RUN=1;SAF=43;SAP=7.23587;SAR=31;SF=9;SRF=43;SRP=5.29458;SRR=34;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	0/1:-170.787,0,-197.305:152:77:74:2539:2794:77,74	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr19	49674841	.	G	A	1804.04	.	AB=0.467532;ABP=4.42035;AC=1;AF=0.5;AN=2;AO=72;CIGAR=1X;DP=154;DPB=154;DPRA=0;EPP=3.13094;EPPR=3.11623;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=41.9512;NS=1;NUMALT=1;ODDS=415.395;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2699;QR=3114;RO=82;RPL=29;RPP=8.92153;RPPR=59.0449;RPR=43;RUN=1;SAF=34;SAP=3.49285;SAR=38;SF=35;SRF=42;SRP=3.11623;SRR=40;TYPE=snp	GT:GL:DP:RO:AO:QA:QR	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-187.467,0,-222.939:154:82:72:2699:3114	.
+chr19	49675017	.	G	T	2411.73	.	AB=0.523077;ABP=4.21296;AC=5;AF=0.5;AN=10;AO=136;CIGAR=1X;DP=997;DPB=260;DPRA=0;EPP=6.13977;EPPR=6.44263;GTI=0;LEN=1;MEANALT=1;MQM=41.7059;MQMR=41.6452;NS=1;NUMALT=1;ODDS=670.932;PAIRED=1;PAIREDR=0.983871;PAO=0;PQA=0;PQR=0;PRO=0;QA=5027;QR=4462;RO=124;RPL=101;RPP=72.5613;RPPR=83.9852;RPR=35;RUN=1;SAF=46;SAP=33.9218;SAR=90;SF=2,3,7,21,22;SRF=49;SRP=14.8483;SRR=75;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	0/1:-355.495,0,-308.254:260:124:136:5027:4462	0/1:-294.917,0,-235.987:204:92:112:4115:3450:92,112	.	.	.	0/1:-429.104,0,-370.635:307:144:163:6037:5388	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-58.3706,0,-214.803:107:78:29:1043:2842:78,29	0/1:-148.186,0,-152.584:119:59:60:2118:2172	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr19	49675233	.	C	T	1742.91	.	AB=0.533333;ABP=5.03701;AC=5;AF=0.5;AN=10;AO=112;CIGAR=1X;DP=849;DPB=210;DPRA=0;EPP=3.08785;EPPR=3.03269;GTI=0;LEN=1;MEANALT=2;MQM=41.4286;MQMR=41.8557;NS=1;NUMALT=1;ODDS=504.389;PAIRED=1;PAIREDR=0.989691;PAO=0;PQA=0;PQR=0;PRO=0;QA=3789;QR=3385;RO=97;RPL=23;RPP=87.4651;RPPR=56.7598;RPR=89;RUN=1;SAF=72;SAP=22.8638;SAR=40;SF=2,3,7,21,22;SRF=57;SRP=9.47994;SRR=40;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	0/1:-267.413,0,-232.036:210:97:112:3789:3385	0/1:-254.588,0,-200.175:186:84:100:3582:3018:84,100	.	.	.	0/1:-269.269,0,-340.715:248:133:115:3971:4801	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-42.2669,0,-183.926:94:68:25:803:2433:68,25	0/1:-113.277,0,-140.16:111:58:51:1695:1987	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr19	49684586	.	T	A	2685.51	.	AB=0.594872;ABP=18.2551;AC=1;AF=0.5;AN=2;AO=116;CIGAR=1X;DP=195;DPB=195;DPRA=0;EPP=79.6857;EPPR=60.1172;GTI=0;LEN=1;MEANALT=2;MQM=40.8793;MQMR=41.2727;NS=1;NUMALT=1;ODDS=368.37;PAIRED=0.991379;PAIREDR=0.961039;PAO=0;PQA=0;PQR=0;PRO=0;QA=4010;QR=2696;RO=77;RPL=38;RPP=32.9616;RPPR=4.39215;RPR=78;RUN=1;SAF=60;SAP=3.30981;SAR=56;SF=15;SRF=45;SRP=7.77626;SRR=32;TYPE=snp	GT:GL:DP:RO:AO:QA:QR	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-287.995,0,-174.675:195:77:116:4010:2696	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr19	49692023	.	C	T	5263.91	.	AB=0.478448;ABP=4.88226;AC=1;AF=0.5;AN=2;AO=222;CIGAR=1X;DP=464;DPB=464;DPRA=0;EPP=3.36243;EPPR=7.42624;GTI=0;LEN=1;MEANALT=2;MQM=41.3423;MQMR=41.7647;NS=1;NUMALT=1;ODDS=1212.06;PAIRED=0.990991;PAIREDR=0.987395;PAO=0;PQA=0;PQR=0;PRO=0;QA=7770;QR=8478;RO=238;RPL=127;RPP=13.0265;RPPR=19.1047;RPR=95;RUN=1;SAF=103;SAP=5.51434;SAR=119;SF=2;SRF=104;SRP=11.2218;SRR=134;TYPE=snp	GT:GL:DP:RO:AO:QA:QR	.	.	0/1:-535.041,0,-597.38:464:238:222:7770:8478	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr19	49693461	.	A	C	2047.48	.	AB=0.508287;ABP=3.11827;AC=1;AF=0.5;AN=2;AO=92;CIGAR=1X;DP=181;DPB=181;DPRA=0;EPP=3.38795;EPPR=3.22989;GTI=0;LEN=1;MEANALT=1;MQM=38.7391;MQMR=39.2022;NS=1;NUMALT=1;ODDS=438.24;PAIRED=0.934783;PAIREDR=0.94382;PAO=0;PQA=0;PQR=0;PRO=0;QA=3212;QR=3014;RO=89;RPL=41;RPP=5.3706;RPPR=40.1205;RPR=51;RUN=1;SAF=51;SAP=5.3706;SAR=41;SF=15;SRF=49;SRP=4.98658;SRR=40;TYPE=snp	GT:GL:DP:RO:AO:QA:QR	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-211.735,0,-200.797:181:89:92:3212:3014	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr19	49699866	.	C	T	2401.62	.	AB=0.462329;ABP=6.60959;AC=4;AF=0.5;AN=8;AO=135;CIGAR=1X;DP=885;DPB=292;DPRA=0;EPP=27.4756;EPPR=23.3714;GTI=0;LEN=1;MEANALT=3;MQM=41.3259;MQMR=41.974;NS=1;NUMALT=1;ODDS=713.425;PAIRED=0.985185;PAIREDR=0.993506;PAO=0;PQA=0;PQR=0;PRO=0;QA=4776;QR=5610;RO=154;RPL=43;RPP=41.6303;RPPR=35.4978;RPR=92;RUN=1;SAF=69;SAP=3.15506;SAR=66;SF=2,3,21,22;SRF=77;SRP=3.0103;SRR=77;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	0/1:-323.327,0,-399.87:292:154:135:4776:5610	0/1:-435.316,0,-437.457:333:168:165:6205:6240:168,165	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-68.8163,0,-254.88:129:94:35:1236:3387:94,35	0/1:-177.853,0,-152.062:131:60:71:2528:2205	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr19	49703651	.	A	T	2652.29	.	AB=0.469136;ABP=5.02092;AC=1;AF=0.5;AN=2;AO=114;CIGAR=1X;DP=243;DPB=243;DPRA=0;EPP=4.22937;EPPR=3.28173;GTI=0;LEN=1;MEANALT=2;MQM=40.8246;MQMR=40.9297;NS=1;NUMALT=1;ODDS=610.713;PAIRED=0.973684;PAIREDR=0.867188;PAO=0;PQA=0;PQR=0;PRO=0;QA=4147;QR=4757;RO=128;RPL=83;RPP=54.5161;RPPR=7.35324;RPR=31;RUN=1;SAF=58;SAP=3.08649;SAR=56;SF=9;SRF=62;SRP=3.28173;SRR=66;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	0/1:-277.501,0,-333.181:243:128:114:4147:4757:128,114	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr19	49714439	.	G	A	2084.39	.	AB=0.523256;ABP=3.81829;AC=1;AF=0.5;AN=2;AO=90;CIGAR=1X;DP=172;DPB=172;DPRA=0;EPP=3.39634;EPPR=3.98746;GTI=0;LEN=1;MEANALT=2;MQM=42;MQMR=41.7125;NS=1;NUMALT=1;ODDS=405.137;PAIRED=0.988889;PAIREDR=0.9875;PAO=0;PQA=0;PQR=0;PRO=0;QA=3051;QR=2708;RO=80;RPL=48;RPP=3.87889;RPPR=13.8677;RPR=42;RUN=1;SAF=49;SAP=4.55446;SAR=41;SF=26;SRF=49;SRP=11.8048;SRR=31;TYPE=snp	GT:GL:DP:RO:AO:QA:QR	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-215.286,0,-184.498:172:80:90:3051:2708	.	.	.	.	.	.	.	.	.	.
+chr19	49714732	.	C	G	3840.77	.	AB=0.512077;ABP=3.27256;AC=2;AF=0.5;AN=4;AO=106;CIGAR=1X;DP=575;DPB=207;DPRA=0;EPP=16.8586;EPPR=15.518;GTI=0;LEN=1;MEANALT=2;MQM=41.6792;MQMR=42;NS=1;NUMALT=1;ODDS=593.438;PAIRED=0.981132;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=4000;QR=3807;RO=100;RPL=58;RPP=5.05886;RPPR=3.79203;RPR=48;RUN=1;SAF=50;SAP=3.74778;SAR=56;SF=14,25;SRF=39;SRP=13.5202;SRR=61;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-280.974,0,-266.694:207:100:106:4000:3807	.	.	.	.	.	.	.	.	.	.	0/1:-505.07,0,-433.459:368:173:192:7123:6272:173,192	.	.	.	.	.	.	.	.	.	.	.
+chr19	55665410	.	C	T	1932.54	.	AB=0;ABP=0;AC=6;AF=1;AN=10;AO=148;CIGAR=1X;DP=633;DPB=148;DPRA=0;EPP=26.4857;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=41.1284;MQMR=0;NS=1;NUMALT=1;ODDS=209.777;PAIRED=0.993243;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=5375;QR=0;RO=0;RPL=45;RPP=52.3673;RPPR=0;RPR=103;RUN=1;SAF=97;SAP=34.0565;SAR=51;SF=13,18,19,28,32;SRF=0;SRP=0;SRR=0;TYPE=snp	GT:GL:DP:RO:AO:QA:QR	.	.	.	.	.	.	.	.	.	.	.	.	.	1/1:-461.034,-44.5524,0:148:0:148:5375:0	.	.	.	.	0/1:-121.571,0,-149.661:107:57:50:1769:2099	0/1:-146.91,0,-221.037:142:82:60:2192:3064	.	.	.	.	.	.	.	.	0/1:-143.443,0,-92.4973:93:39:54:1976:1386	.	.	.	0/1:-155.534,0,-220.214:143:82:61:2298:3065	.	.	.	.
+chr19	55665584	.	A	C	6758.09	.	AB=0;ABP=0;AC=74;AF=1;AN=74;AO=172;CIGAR=1X;DP=8312;DPB=173;DPRA=0;EPP=23.21;EPPR=5.18177;GTI=0;LEN=1;MEANALT=1;MQM=41.8953;MQMR=24;NS=1;NUMALT=1;ODDS=238.228;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=6280;QR=14;RO=1;RPL=147;RPP=190.918;RPPR=5.18177;RPR=25;RUN=1;SAF=83;SAP=3.46479;SAR=89;SF=0,1,2,3,4,5,6,7,8,9,10,11,12,13,14,15,16,17,18,19,20,21,22,23,24,25,26,27,28,29,30,31,32,33,34,35,36;SRF=0;SRP=5.18177;SRR=1;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	1/1:-542.935,-50.718,0:173:1:172:6280:14:1,172	1/1:-282.905,-27.3937,0:91:0:91:3252:0	1/1:-723.171,-71.0431,0:236:0:236:8370:0	1/1:-732.907,-63.0291,0:232:2:230:8538:75:2,230	1/1:-833.053,-78.8699,0:262:0:262:9629:0	1/1:-827.302,-77.9343,0:264:1:263:9555:16:1,263	1/1:-563.255,-53.2823,0:177:0:177:6528:0:0,177	1/1:-830.233,-79.6775,0:267:1:266:9603:13	1/1:-510.038,-49.0679,0:163:0:163:5887:0	1/1:-598.133,-56.5936,0:188:0:188:6891:0:0,188	1/1:-791.662,-77.0637,0:256:0:256:9126:0:0,256	1/1:-1080.6,-96.9118,0:345:2:343:12580:76	1/1:-1121.7,-106.565,0:357:0:354:12966:0:0,354	1/1:-824.142,-80.676,0:268:0:268:9497:0	1/1:-605.665,-57.1957,0:190:0:190:6974:0	1/1:-705.387,-66.1845,0:232:1:231:8238:38	1/1:-779.019,-74.6554,0:248:0:248:9024:0:0,248	1/1:-825.398,-79.1709,0:263:0:263:9585:0	1/1:-449.412,-43.6494,0:145:0:145:5205:0	1/1:-738.101,-71.9462,0:239:0:239:8555:0	1/1:-928.968,-90.008,0:299:0:299:10792:0:0,299	1/1:-371.774,-36.4246,0:121:0:121:4281:0:0,121	1/1:-444.102,-43.0473,0:143:0:143:5103:0	1/1:-834.541,-78.5688,0:261:0:261:9645:0	1/1:-269.348,-26.1896,0:87:0:87:3095:0:0,87	1/1:-1127.77,-109.274,0:363:0:363:13018:0:0,363	1/1:-955.01,-94.2224,0:313:0:313:10994:0	1/1:-1051.36,-99.942,0:332:0:332:12125:0:0,332	1/1:-564.811,-54.7875,0:182:0:182:6515:0	1/1:-1015.1,-99.0389,0:329:0:329:11749:0	1/1:-578.169,-55.3895,0:184:0:184:6649:0	1/1:-552.401,-50.5309,0:180:1:179:6405:38	1/1:-623.022,-59.3029,0:197:0:197:7173:0	1/1:-596.761,-57.7978,0:192:0:192:6886:0	1/1:-607.102,-57.7978,0:192:0:192:6995:0	1/1:-308.739,-28.8989,0:96:0:96:3559:0	1/1:-766.284,-73.4513,0:245:0:244:8858:0
+chr19	55667647	.	C	A	16.79	.	AB=0.5;ABP=3.0103;AC=1;AF=0.5;AN=2;AO=2;CIGAR=1X;DP=4;DPB=4;DPRA=0;EPP=7.35324;EPPR=3.0103;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=42;NS=1;NUMALT=1;ODDS=1.40111;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=69;QR=45;RO=2;RPL=2;RPP=7.35324;RPPR=3.0103;RPR=0;RUN=1;SAF=2;SAP=7.35324;SAR=0;SF=20;SRF=2;SRP=7.35324;SRR=0;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-5.19824,0,-3.02159:4:2:2:69:45:2,2	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr19	55668397	.	C	T	2597.43	.	AB=0;ABP=0;AC=6;AF=1;AN=10;AO=203;CIGAR=1X;DP=801;DPB=206;DPRA=0;EPP=3.10657;EPPR=9.52472;GTI=0;LEN=1;MEANALT=1;MQM=41.665;MQMR=41.3333;NS=1;NUMALT=1;ODDS=266.863;PAIRED=0.985222;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=6967;QR=62;RO=3;RPL=57;RPP=87.7405;RPPR=3.73412;RPR=146;RUN=1;SAF=127;SAP=30.833;SAR=76;SF=13,18,19,28,32;SRF=1;SRP=3.73412;SRR=2;TYPE=snp	GT:GL:DP:RO:AO:QA:QR	.	.	.	.	.	.	.	.	.	.	.	.	.	1/1:-599.254,-56.2871,0:206:3:203:6967:62	.	.	.	.	0/1:-134.644,0,-102.672:99:44:55:1935:1532	0/1:-289.585,0,-217.732:205:91:114:4080:3265	.	.	.	.	.	.	.	.	0/1:-175.711,0,-130.918:129:57:72:2485:1966	.	.	.	0/1:-163.773,0,-237.516:162:92:70:2447:3294	.	.	.	.
+chr19	55668509	.	A	T	3048.01	.	AB=0;ABP=0;AC=16;AF=1;AN=28;AO=242;CIGAR=1X;DP=2673;DPB=243;DPRA=0;EPP=9.07607;EPPR=0;GTI=0;LEN=1;MEANALT=2;MQM=41.8843;MQMR=0;NS=1;NUMALT=1;ODDS=340.088;PAIRED=0.995868;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=8609;QR=0;RO=0;RPL=167;RPP=78.958;RPPR=0;RPR=75;RUN=1;SAF=119;SAP=3.15387;SAR=123;SF=3,4,13,14,17,18,19,23,28,31,32,33,34,35;SRF=0;SRP=0;SRR=0;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	1/1:-748.03,-72.8493,0:243:0:242:8609:0:0,242	0/1:-324.439,0,-243.15:223:99:123:4515:3574	.	.	.	.	.	.	.	.	1/1:-799.803,-78.5688,0:261:0:261:9243:0	0/1:-252.827,0,-195.233:180:80:98:3535:2873	.	.	0/1:-290.028,0,-385.278:267:149:118:4269:5372	0/1:-150.925,0,-138.331:115:56:59:2146:2017	0/1:-371.258,0,-266.627:254:111:142:5161:3996	.	.	.	0/1:-332.977,0,-289.822:248:113:134:4704:4202	.	.	.	.	0/1:-210.723,0,-158.93:153:66:86:2977:2354	.	.	0/1:-153.555,0,-111.86:107:46:61:2131:1654	0/1:-244.21,0,-212.219:179:85:94:3444:3093	0/1:-267.845,0,-235.092:195:93:102:3761:3404	0/1:-155.709,0,-276.029:169:102:66:2372:3777	0/1:-100.65,0,-104.642:79:40:39:1428:1491	.
+chr19	55669004	.	G	A	366.44	.	AB=0.413043;ABP=6.03148;AC=1;AF=0.5;AN=2;AO=19;CIGAR=1X;DP=46;DPB=46;DPRA=0;EPP=4.03889;EPPR=3.73412;GTI=0;LEN=1;MEANALT=1;MQM=38.2105;MQMR=42;NS=1;NUMALT=1;ODDS=84.3749;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=682;QR=968;RO=27;RPL=8;RPP=4.03889;RPPR=21.1059;RPR=11;RUN=1;SAF=10;SAP=3.12459;SAR=9;SF=3;SRF=12;SRP=3.73412;SRR=15;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	0/1:-42.3087,0,-70.8059:46:27:19:682:968:27,19	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr2	47387986	.	GACCAAAAAAAAAAAAAAAAAAAAAAAATCACATTTACTC	GACCAAAAAAAAAAAAAAAAAAAATCACATTTACTC,GACCAAAAAAAAAAAAAAAAAAATCACATTTACTC,GACCAAAAAAAAAAAAAAAAAAAAAAAAATCACATTTACTC,GACCAAAAAAAAAAAAAAAAAAAAATCACATTTACTC	205.80	.	AB=0;ABP=0;AC=1,1,1,2;AF=1;AN=6;AO=13;CIGAR=4M3D33M;DP=176;DPB=65.175;DPRA=0;EPP=16.5402;EPPR=0;GTI=0;LEN=3;MEANALT=34;MQM=41.2308;MQMR=0;NS=1;NUMALT=1;ODDS=6.29628;PAIRED=1;PAIREDR=0;PAO=0.333333;PQA=2.66667;PQR=2.66667;PRO=0.333333;QA=410;QR=0;RO=0;RPL=7;RPP=3.17734;RPPR=0;RPR=6;RUN=1;SAF=5;SAP=4.51363;SAR=8;SF=6,21,24;SRF=0;SRP=0;SRR=0;TYPE=del	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	4/4:-35.9137,.,.,.,.,.,.,.,.,.,-7.52575,.,.,.,0:71:0:.,.,.,13:.,.,.,410:0:0,13	.	.	.	.	.	.	.	.	.	.	.	.	.	.	1/2:-36.4137,-19.176,-13.7574,-19.0484,0,-13.9309,.,.,.,.,.,.,.,.,.:60:0:12,11,.,.:254,253,.,.:0:0,12,11	.	.	0/3:-4.13052,.,.,.,.,.,0,.,.,-4.3721,.,.,.,.,.:45:2:.,.,3,.:.,.,66,.:67:2,3	.	.	.	.	.	.	.	.	.	.	.	.
+chr2	47387988	.	CCAAAAAAAAAAAAAAAAAAAAAAAATCACATTTACTC	CCAAAAAAAAAAAAAAAAAAAAAAATCACATTTACTC	28.28	.	AB=0.163121;ABP=142;AC=1;AF=0.5;AN=2;AO=23;CIGAR=2M1D35M;DP=141;DPB=139.737;DPRA=0;EPP=3.86001;EPPR=3.09072;GTI=0;LEN=1;MEANALT=59;MQM=36.087;MQMR=38.5926;NS=1;NUMALT=1;ODDS=6.51117;PAIRED=0.869565;PAIREDR=1;PAO=3.25;PQA=115.75;PQR=115.75;PRO=3.25;QA=493;QR=939;RO=27;RPL=14;RPP=5.3706;RPPR=12.7417;RPR=9;RUN=1;SAF=1;SAP=44.6459;SAR=22;SF=27;SRF=5;SRP=26.2531;SRR=22;TYPE=del	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-12.3811,0,-45.8887:141:27:23:493:939:27,23	.	.	.	.	.	.	.	.	.
+chr2	47387989	.	CAAAAAAAAAAAAAAAAAAAAAAAATCACATTTACTC	CAAAAAAAAAAAAAAAAAAAATCACATTTACTC,CAAAAAAAAAAAAAAAAAATCACATTTACTC,CAAAAAAAAAAAAAAAAAAATCACATTTACTC,CAAAAAAAAAAAAAAAAAAAAATCACATTTACTC,CAAAAAAAAAAAAAAAAAAAAAATCACATTTACTC	517.70	.	AB=0;ABP=0;AC=8,3,3,1,1;AF=1;AN=18;AO=13;CIGAR=1M6D30M;DP=1089;DPB=69.5676;DPRA=0;EPP=4.51363;EPPR=9.52472;GTI=0;LEN=6;MEANALT=25;MQM=35.8462;MQMR=30;NS=1;NUMALT=1;ODDS=5.15245;PAIRED=1;PAIREDR=0.333333;PAO=0.857143;PQA=31;PQR=31;PRO=0.857143;QA=320;QR=111;RO=3;RPL=12;RPP=23.2217;RPPR=9.52472;RPR=1;RUN=1;SAF=6;SAP=3.17734;SAR=7;SF=0,3,5,9,10,12,16,20,25;SRF=0;SRP=9.52472;SRR=3;TYPE=del	GT:GL:DP:RO:AO:QA:QR:AD	2/2:-20.824,.,.,-10.3435,.,0,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.:75:3:.,13,.,.,.:.,320,.,.,.:111:3,13	.	.	1/1:-33.3938,-20.8809,0,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.:106:0:22,.,.,.,.:421,.,.,.,.:0:0,22	.	4/1:-87.0274,-41.4053,-21.8384,.,.,.,.,.,.,.,-54.6601,0,.,.,-38.1035,.,.,.,.,.,.:123:0:35,.,.,25,.:748,.,.,572,.:0:0,25,35	.	.	.	0/1:-7.20856,0,-2.205,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.:53:4:8,.,.,.,.:185,.,.,.,.:140:4,8	1/3:-56.2738,-42.075,-21.0029,.,.,.,-29.8571,0,.,-7.58093,.,.,.,.,.,.,.,.,.,.,.:98:0:18,.,22,.,.:406,.,562,.,.:0:0,18,22	.	1/3:-141.105,-70.2136,-43.7229,.,.,.,-82.9383,0,.,-59.1569,.,.,.,.,.,.,.,.,.,.,.:195:0:48,.,39,.,.:1120,.,953,.,.:0:0,48,39	.	.	.	0/5:-8.15322,.,.,.,.,.,.,.,.,.,.,.,.,.,.,0,.,.,.,.,-13.9284:90:10:.,.,.,.,10:.,.,.,.,290:367:10,10	.	.	.	1/3:-70.8263,-42.8033,-18.1188,.,.,.,-44.5846,0,.,-21.4053,.,.,.,.,.,.,.,.,.,.,.:117:0:27,.,22,.,.:595,.,571,.,.:0:0,27,22	.	.	.	.	1/2:-117.142,-63.4516,-43.525,-62.1802,0,-39.3373,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.:232:1:40,40,.,.,.:909,927,.,.,.:37:1,40,40	.	.	.	.	.	.	.	.	.	.	.
+chr2	105977761	.	G	A	1129.91	.	AB=0.461538;ABP=4.51363;AC=4;AF=0.5;AN=8;AO=54;CIGAR=1X;DP=421;DPB=117;DPRA=0;EPP=3.17115;EPPR=3.32051;GTI=0;LEN=1;MEANALT=1;MQM=41.6111;MQMR=42;NS=1;NUMALT=1;ODDS=305.067;PAIRED=0.981481;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2011;QR=2339;RO=63;RPL=25;RPP=3.6537;RPPR=10.7656;RPR=29;RUN=1;SAF=27;SAP=3.0103;SAR=27;SF=6,9,16,21;SRF=27;SRP=5.80219;SRR=36;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	0/1:-138.749,0,-168.376:117:63:54:2011:2339:63,54	.	.	0/1:-157.043,0,-137.306:113:54:59:2207:1965:54,59	.	.	.	.	.	.	0/1:-131.114,0,-150.683:106:56:50:1887:2101:56,50	.	.	.	.	0/1:-54.7251,0,-155.576:85:59:25:923:2089:59,25	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr2	105977776	.	G	A	2675.58	.	AB=0.520202;ABP=3.71219;AC=3;AF=0.5;AN=6;AO=103;CIGAR=1X;DP=602;DPB=198;DPRA=0;EPP=4.04333;EPPR=3.21602;GTI=0;LEN=1;MEANALT=1;MQM=41.9806;MQMR=42;NS=1;NUMALT=1;ODDS=542.997;PAIRED=0.990291;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3806;QR=3494;RO=95;RPL=36;RPP=23.2703;RPPR=8.15326;RPR=67;RUN=1;SAF=47;SAP=4.71796;SAR=56;SF=5,6,25;SRF=38;SRP=11.2619;SRR=57;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	0/1:-270.11,0,-243.755:198:95:103:3806:3494:95,103	0/1:-187.834,0,-154.299:133:61:71:2633:2234:61,71	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-369.707,0,-324.794:271:129:142:5215:4685:129,142	.	.	.	.	.	.	.	.	.	.	.
+chr2	105977903	.	G	C	1817.08	.	AB=0.583893;ABP=12.1188;AC=5;AF=0.5;AN=10;AO=87;CIGAR=1X;DP=767;DPB=149;DPRA=0;EPP=62.9379;EPPR=34.5317;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=42;NS=1;NUMALT=1;ODDS=328.65;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3273;QR=2330;RO=62;RPL=67;RPP=58.1457;RPPR=38.8746;RPR=20;RUN=1;SAF=48;SAP=5.03202;SAR=39;SF=0,5,10,12,21;SRF=31;SRP=3.0103;SRR=31;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	0/1:-238.002,0,-156.744:149:62:87:3273:2330:62,87	.	.	.	.	0/1:-215.854,0,-264.528:183:99:83:3134:3704:99,83	.	.	.	.	0/1:-219.107,0,-98.994:123:43:80:2961:1567:43,80	.	0/1:-274.503,0,-215.414:185:82:102:3834:3137:82,102	.	.	.	.	.	.	.	.	0/1:-56.5772,0,-277.909:127:97:30:1107:3656:97,30	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr2	105979730	.	C	A	7652.46	.	AB=0.547619;ABP=9.62812;AC=11;AF=0.5;AN=16;AO=184;CIGAR=1X;DP=3126;DPB=336;DPRA=0;EPP=7.73089;EPPR=9.92473;GTI=0;LEN=1;MEANALT=1;MQM=41.7826;MQMR=41.875;NS=1;NUMALT=1;ODDS=837.577;PAIRED=0.994565;PAIREDR=0.993421;PAO=0;PQA=0;PQR=0;PRO=0;QA=6697;QR=5509;RO=152;RPL=70;RPP=25.858;RPPR=25.8679;RPR=114;RUN=1;SAF=122;SAP=45.4956;SAR=62;SF=6,9,16,20,21,24,25,27;SRF=101;SRP=38.7253;SRR=51;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	0/1:-478.079,0,-377.947:336:152:184:6697:5509:152,184	.	.	0/1:-454.321,0,-388.69:328:155:173:6392:5620:155,173	.	.	.	.	.	.	1/1:-1435.19,-133.462,0:448:1:447:16582:14:1,447	.	.	.	1/1:-1666.08,-154.143,0:528:2:526:19267:52:2,526	0/1:-111.791,0,-345.685:182:129:53:1913:4595:129,53	.	.	1/1:-738.152,-60.9723,0:235:3:232:8626:108:3,232	0/1:-765.422,0,-717.927:592:290:302:10867:10282:290,302	.	0/1:-630.337,0,-583.078:477:230:246:8922:8359:230,246	.	.	.	.	.	.	.	.	.
+chr2	105979752	.	G	A	5457.49	.	AB=0.502304;ABP=3.03031;AC=1;AF=0.5;AN=2;AO=218;CIGAR=1X;DP=434;DPB=434;DPRA=0;EPP=41.2999;EPPR=30.1939;GTI=0;LEN=1;MEANALT=1;MQM=41.5688;MQMR=41.8981;NS=1;NUMALT=1;ODDS=1234.17;PAIRED=0.990826;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=8039;QR=7802;RO=216;RPL=103;RPP=4.44467;RPPR=10.8919;RPR=115;RUN=1;SAF=137;SAP=34.2476;SAR=81;SF=9;SRF=124;SRP=13.3047;SRR=92;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	0/1:-560.123,0,-547.755:434:216:218:8039:7802:216,218	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr2	105979872	.	G	A	3944.20	.	AB=0.411905;ABP=31.3222;AC=1;AF=0.5;AN=2;AO=173;CIGAR=1X;DP=420;DPB=420;DPRA=0;EPP=18.3863;EPPR=32.7047;GTI=0;LEN=1;MEANALT=2;MQM=41.6763;MQMR=41.9837;NS=1;NUMALT=1;ODDS=908.186;PAIRED=1;PAIREDR=0.98374;PAO=0;PQA=0;PQR=0;PRO=0;QA=6241;QR=8943;RO=246;RPL=106;RPP=22.1017;RPPR=71.3675;RPR=67;RUN=1;SAF=57;SAP=46.7033;SAR=116;SF=6;SRF=99;SRP=23.348;SRR=147;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	0/1:-412.137,0,-649.493:420:246:173:6241:8943:246,173	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr2	179393111	.	A	G	3763.64	.	AB=0.58;ABP=19.6872;AC=2;AF=0.5;AN=4;AO=174;CIGAR=1X;DP=520;DPB=300;DPRA=0;EPP=3.20998;EPPR=4.73369;GTI=0;LEN=1;MEANALT=1;MQM=41.8506;MQMR=41.8571;NS=1;NUMALT=1;ODDS=696.466;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=6509;QR=4662;RO=126;RPL=107;RPP=22.9779;RPPR=20.6578;RPR=67;RUN=1;SAF=106;SAP=21.031;SAR=68;SF=5,10;SRF=75;SRP=12.937;SRR=51;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	0/1:-471.997,0,-313.857:300:126:174:6509:4662:126,174	.	.	.	.	0/1:-302.281,0,-272.16:220:107:113:4261:3914:107,113	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr2	179395067	.	C	G	1339.39	.	AB=0.44186;ABP=8.06024;AC=3;AF=0.5;AN=6;AO=76;CIGAR=1X;DP=476;DPB=172;DPRA=0;EPP=3.0103;EPPR=9.61615;GTI=0;LEN=1;MEANALT=2;MQM=42;MQMR=41.8;NS=1;NUMALT=1;ODDS=430.52;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2853;QR=3363;RO=95;RPL=26;RPP=19.4678;RPPR=37.7767;RPR=50;RUN=1;SAF=44;SAP=7.12467;SAR=32;SF=0,16,21;SRF=52;SRP=4.86177;SRR=43;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	0/1:-195.823,0,-240.435:172:95:76:2853:3363:95,76	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-204.051,0,-270.92:180:101:79:2982:3759:101,79	.	.	.	.	0/1:-37.0485,0,-284.139:124:100:24:852:3707:100,24	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr2	179395560	.	G	A	4370.58	.	AB=0.492537;ABP=3.20476;AC=2;AF=0.5;AN=4;AO=198;CIGAR=1X;DP=693;DPB=402;DPRA=0;EPP=6.56362;EPPR=3.0533;GTI=0;LEN=1;MEANALT=2;MQM=41.596;MQMR=42;NS=1;NUMALT=1;ODDS=1164.49;PAIRED=0.994949;PAIREDR=0.99505;PAO=0;PQA=0;PQR=0;PRO=0;QA=7373;QR=7431;RO=202;RPL=90;RPP=6.56362;RPPR=4.55828;RPR=108;RUN=1;SAF=104;SAP=4.107;SAR=94;SF=5,10;SRF=115;SRP=11.4382;SRR=87;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	0/1:-513.7,0,-523.678:402:202:198:7373:7431:202,198	.	.	.	.	0/1:-376.002,0,-385.518:291:148:143:5364:5448:148,143	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr2	179395760	.	G	A	5243.64	.	AB=0.553444;ABP=13.455;AC=2;AF=0.5;AN=4;AO=233;CIGAR=1X;DP=744;DPB=421;DPRA=0;EPP=9.80431;EPPR=23.3852;GTI=0;LEN=1;MEANALT=1;MQM=41.8026;MQMR=41.8936;NS=1;NUMALT=1;ODDS=1065.32;PAIRED=0.995708;PAIREDR=0.994681;PAO=0;PQA=0;PQR=0;PRO=0;QA=8551;QR=6955;RO=188;RPL=92;RPP=25.3867;RPPR=19.6891;RPR=141;RUN=1;SAF=116;SAP=3.01962;SAR=117;SF=5,10;SRF=100;SRP=4.67356;SRR=88;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	0/1:-613.787,0,-474.703:421:188:233:8551:6955:188,233	.	.	.	.	0/1:-460.272,0,-381.684:323:147:174:6443:5560:147,174	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr2	179395958	.	T	C	5703.48	.	AB=0.429412;ABP=17.7252;AC=8;AF=0.5;AN=14;AO=146;CIGAR=1X;DP=2616;DPB=340;DPRA=0;EPP=3.0103;EPPR=14.4721;GTI=0;LEN=1;MEANALT=1;MQM=41.6301;MQMR=41.9897;NS=1;NUMALT=1;ODDS=808.691;PAIRED=1;PAIREDR=0.994845;PAO=0;PQA=0;PQR=0;PRO=0;QA=5490;QR=7374;RO=194;RPL=47;RPP=43.2272;RPPR=54.7675;RPR=99;RUN=1;SAF=104;SAP=60.1825;SAR=42;SF=5,9,10,12,16,20,25;SRF=142;SRP=93.6749;SRR=52;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	0/1:-369.531,0,-533.657:340:194:146:5490:7374:194,146	.	.	.	0/1:-337.507,0,-374.253:269:139:129:4840:5278:139,129	0/1:-378.114,0,-362.175:282:136:146:5346:5184:136,146	.	1/1:-1395.09,-130.647,0:436:0:434:16158:0:0,434	.	.	.	0/1:-406.477,0,-419.831:310:156:154:5786:5946:156,154	.	.	.	0/1:-559.529,0,-528.545:413:201:211:7918:7595:201,211	.	.	.	.	0/1:-683.298,0,-804.308:566:297:269:9914:11304:297,269	.	.	.	.	.	.	.	.	.	.	.
+chr2	179396162	.	C	G	6897.60	.	AB=0.448947;ABP=16.9788;AC=1;AF=0.5;AN=2;AO=277;CIGAR=1X;DP=617;DPB=617;DPRA=0;EPP=8.72511;EPPR=35.3005;GTI=0;LEN=1;MEANALT=2;MQM=41.9856;MQMR=41.6637;NS=1;NUMALT=1;ODDS=1588.23;PAIRED=0.99639;PAIREDR=0.99115;PAO=0;PQA=0;PQR=0;PRO=0;QA=10279;QR=12169;RO=339;RPL=173;RPP=40.333;RPPR=28.4338;RPR=104;RUN=1;SAF=108;SAP=32.1802;SAR=169;SF=12;SRF=131;SRP=40.9886;SRR=208;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-705.826,0,-867.074:617:339:277:10279:12169:339,277	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr2	179396354	.	G	A	7750.46	.	AB=0.52071;ABP=4.2695;AC=6;AF=0.5;AN=10;AO=176;CIGAR=1X;DP=2355;DPB=338;DPRA=0;EPP=10.1169;EPPR=10.7311;GTI=0;LEN=1;MEANALT=1;MQM=41.7727;MQMR=41.9753;NS=1;NUMALT=1;ODDS=938.473;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=6568;QR=5984;RO=162;RPL=79;RPP=7.00778;RPPR=5.63751;RPR=97;RUN=1;SAF=87;SAP=3.05965;SAR=89;SF=9,12,16,20,25;SRF=77;SRP=3.86817;SRR=85;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	0/1:-466.054,0,-415.79:338:162:176:6568:5984:162,176	.	.	1/1:-1434.86,-132.459,0:445:1:444:16668:15:1,444	.	.	.	0/1:-404.326,0,-600.379:380:219:161:6020:8273:219,161	.	.	.	0/1:-693.924,0,-637.129:502:243:259:9788:9145:243,259	.	.	.	.	0/1:-920.198,0,-874.498:690:336:352:13057:12513:336,352	.	.	.	.	.	.	.	.	.	.	.
+chr2	179397150	.	T	C	1216.38	.	AB=0.279352;ABP=107.461;AC=1;AF=0.5;AN=2;AO=69;CIGAR=1X;DP=247;DPB=247;DPRA=0;EPP=10.0912;EPPR=10.6779;GTI=0;LEN=1;MEANALT=2;MQM=41.971;MQMR=41.9661;NS=1;NUMALT=1;ODDS=280.082;PAIRED=0;PAIREDR=0.00564972;PAO=0;PQA=0;PQR=0;PRO=0;QA=2468;QR=6417;RO=177;RPL=39;RPP=5.55942;RPPR=14.8;RPR=30;RUN=1;SAF=29;SAP=6.81824;SAR=40;SF=21;SRF=81;SRP=5.77065;SRR=96;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-139.93,0,-482.695:247:177:69:2468:6417:177,69	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr2	179397561	.	C	T	7810.92	.	AB=0.558897;ABP=15.0323;AC=6;AF=0.5;AN=10;AO=223;CIGAR=1X;DP=2569;DPB=399;DPRA=0;EPP=3.79904;EPPR=4.52908;GTI=0;LEN=1;MEANALT=2;MQM=41.6771;MQMR=41.9884;NS=1;NUMALT=1;ODDS=948.327;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=8130;QR=6310;RO=173;RPL=79;RPP=44.1514;RPPR=59.3556;RPR=144;RUN=1;SAF=125;SAP=10.109;SAR=98;SF=9,12,16,20,25;SRF=107;SRP=24.11;SRR=66;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	0/1:-581.884,0,-428.293:399:173:223:8130:6310:173,223	.	.	1/1:-1599.42,-151.274,0:510:1:506:18588:15:1,506	.	.	.	0/1:-349.939,0,-694.184:411:259:150:5477:9422:259,150	.	.	.	0/1:-671.689,0,-811.384:577:308:264:9748:11345:308,264	.	.	.	.	0/1:-792.682,0,-880.063:672:352:317:11502:12479:352,317	.	.	.	.	.	.	.	.	.	.	.
+chr2	179398509	.	C	A	5024.02	.	AB=0.448837;ABP=12.787;AC=2;AF=0.5;AN=4;AO=193;CIGAR=1X;DP=827;DPB=430;DPRA=0;EPP=3.29158;EPPR=5.07182;GTI=0;LEN=1;MEANALT=1;MQM=41.8135;MQMR=41.6751;NS=1;NUMALT=1;ODDS=1096.09;PAIRED=1;PAIREDR=0.991561;PAO=0;PQA=0;PQR=0;PRO=0;QA=7192;QR=8761;RO=237;RPL=60;RPP=62.9677;RPPR=124.182;RPR=133;RUN=1;SAF=102;SAP=4.37169;SAR=91;SF=5,10;SRF=130;SRP=7.85717;SRR=107;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	0/1:-490.419,0,-626.557:430:237:193:7192:8761:237,193	.	.	.	.	0/1:-539.331,0,-508.384:397:195:201:7644:7263:195,201	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr2	179398823	.	G	A	6072.02	.	AB=0.58427;ABP=19.4793;AC=6;AF=0.5;AN=10;AO=156;CIGAR=1X;DP=1828;DPB=267;DPRA=0;EPP=8.57818;EPPR=10.0725;GTI=0;LEN=1;MEANALT=1;MQM=41.9872;MQMR=41.1892;NS=1;NUMALT=1;ODDS=578.378;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=5611;QR=3961;RO=111;RPL=89;RPP=9.74743;RPPR=10.0725;RPR=67;RUN=1;SAF=81;SAP=3.51141;SAR=75;SF=9,12,16,20,25;SRF=60;SRP=4.59489;SRR=51;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	0/1:-407.245,0,-261.076:267:111:156:5611:3961:111,156	.	.	1/1:-1179.86,-113.488,0:380:0:377:13595:0:0,377	.	.	.	0/1:-389.251,0,-417.838:314:161:152:5576:5915:161,152	.	.	.	0/1:-429.118,0,-433.655:337:167:169:6101:6174:167,169	.	.	.	.	0/1:-680.463,0,-656.459:530:258:270:9667:9408:258,270	.	.	.	.	.	.	.	.	.	.	.
+chr2	179399576	.	C	G	7623.47	.	AB=0.443089;ABP=9.93076;AC=3;AF=0.5;AN=4;AO=109;CIGAR=1X;DP=664;DPB=246;DPRA=0;EPP=13.5489;EPPR=32.3173;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=41.8613;NS=1;NUMALT=1;ODDS=597.876;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3948;QR=5069;RO=137;RPL=45;RPP=10.2021;RPPR=3.78696;RPR=64;RUN=1;SAF=53;SAP=3.1896;SAR=56;SF=10,27;SRF=67;SRP=3.15295;SRR=70;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	0/1:-268.778,0,-363.829:246:137:109:3948:5069:137,109	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	1/1:-1284.64,-124.331,0:418:1:417:14897:15:1,417	.	.	.	.	.	.	.	.	.
+chr2	179400585	.	GAAAAAAAAAAAAAAAGAATATAATTTAG	GAAAAAAAAAAAAAAGAATATAATTTAG	134.69	.	AB=0.137931;ABP=168.117;AC=9;AF=0.5;AN=18;AO=20;CIGAR=1M1D27M;DP=1498;DPB=144.138;DPRA=0;EPP=4.74748;EPPR=40.9736;GTI=0;LEN=1;MEANALT=19;MQM=40.1;MQMR=39.7241;NS=1;NUMALT=1;ODDS=5.56935;PAIRED=0.9;PAIREDR=0.91954;PAO=1;PQA=31.6667;PQR=31.6667;PRO=1;QA=642;QR=3130;RO=87;RPL=18;RPP=30.8051;RPPR=53.5532;RPR=2;RUN=1;SAF=10;SAP=3.0103;SAR=10;SF=3,5,9,10,12,16,20,24,25;SRF=37;SRP=7.22845;SRR=50;TYPE=del	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	0/1:-20.6664,0,-226.874:145:87:20:642:3130:87,20	.	0/1:-46.4363,0,-267.01:182:101:32:985:3615:101,32	.	.	.	0/1:-16.7781,0,-157.558:125:59:16:469:2079:59,16	0/1:-19.4426,0,-179.97:126:70:19:546:2509:70,19	.	0/1:-28.173,0,-316.109:194:117:25:834:4130:117,25	.	.	.	0/1:-16.8365,0,-233.116:152:85:20:579:3054:85,20	.	.	.	0/1:-21.7518,0,-275.292:196:102:24:737:3659:102,24	.	.	.	0/1:-30.5994,0,-106.346:85:42:20:607:1488:42,20	0/1:-73.1817,0,-437.292:293:164:49:1635:5855:164,49	.	.	.	.	.	.	.	.	.	.	.
+chr2	179400895	.	C	T	1988.21	.	AB=0.475904;ABP=3.84749;AC=1;AF=0.5;AN=2;AO=79;CIGAR=1X;DP=166;DPB=166;DPRA=0;EPP=3.03779;EPPR=3.91929;GTI=0;LEN=1;MEANALT=2;MQM=41.5443;MQMR=41.5814;NS=1;NUMALT=1;ODDS=457.803;PAIRED=1;PAIREDR=0.976744;PAO=0;PQA=0;PQR=0;PRO=0;QA=2977;QR=3137;RO=86;RPL=47;RPP=9.19487;RPPR=3.41429;RPR=32;RUN=1;SAF=33;SAP=7.6556;SAR=46;SF=5;SRF=37;SRP=6.64625;SRR=49;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	0/1:-206.315,0,-221.523:166:86:79:2977:3137:86,79	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr2	179401311	.	CAAAAAAAAGATT	CAAAAAAAAAGATT	734.86	.	AB=0.52459;ABP=3.33068;AC=1;AF=0.5;AN=2;AO=32;CIGAR=1M1I12M;DP=61;DPB=63.5385;DPRA=0;EPP=12.7819;EPPR=19.3799;GTI=0;LEN=1;MEANALT=4;MQM=42;MQMR=41.9231;NS=1;NUMALT=1;ODDS=127.536;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1133;QR=936;RO=26;RPL=22;RPP=12.7819;RPPR=19.3799;RPR=10;RUN=1;SAF=18;SAP=4.09604;SAR=14;SF=9;SRF=14;SRP=3.34437;SRR=12;TYPE=ins	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	0/1:-81.207,0,-64.2736:61:26:32:1133:936:26,32	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr2	179401870	.	C	A	3294.20	.	AB=0.498141;ABP=3.01837;AC=1;AF=0.5;AN=2;AO=134;CIGAR=1X;DP=269;DPB=269;DPRA=0;EPP=53.8292;EPPR=51.6674;GTI=0;LEN=1;MEANALT=1;MQM=41.8507;MQMR=42;NS=1;NUMALT=1;ODDS=758.518;PAIRED=1;PAIREDR=0.992593;PAO=0;PQA=0;PQR=0;PRO=0;QA=4958;QR=5039;RO=135;RPL=90;RPP=37.3001;RPPR=75.2158;RPR=44;RUN=1;SAF=47;SAP=28.9383;SAR=87;SF=9;SRF=40;SRP=51.6674;SRR=95;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	0/1:-347.507,0,-355.45:269:135:134:4958:5039:135,134	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr2	179404402	.	T	C	5604.02	.	AB=0.485537;ABP=3.88966;AC=2;AF=0.5;AN=4;AO=235;CIGAR=1X;DP=913;DPB=484;DPRA=0;EPP=18.5433;EPPR=10.3445;GTI=0;LEN=1;MEANALT=1;MQM=41.9149;MQMR=41.9197;NS=1;NUMALT=1;ODDS=1350.09;PAIRED=0.995745;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=8611;QR=9178;RO=249;RPL=90;RPP=30.9622;RPPR=17.6699;RPR=145;RUN=1;SAF=140;SAP=21.7219;SAR=95;SF=12,20;SRF=149;SRP=23.9489;SRR=100;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-599.954,0,-649.36:484:249:235:8611:9178:249,235	.	.	.	.	.	.	.	0/1:-543.344,0,-568.407:429:218:211:7794:8058:218,211	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr2	179404628	.	T	A	1307.63	.	AB=0.482759;ABP=3.30981;AC=1;AF=0.5;AN=2;AO=56;CIGAR=1X;DP=116;DPB=116;DPRA=0;EPP=15.5738;EPPR=8.40154;GTI=0;LEN=1;MEANALT=2;MQM=41.9643;MQMR=41.6034;NS=1;NUMALT=1;ODDS=301.093;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1988;QR=2118;RO=58;RPL=29;RPP=3.16541;RPPR=24.5753;RPR=27;RUN=1;SAF=34;SAP=8.59409;SAR=22;SF=5;SRF=26;SRP=4.35811;SRR=32;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	0/1:-138.644,0,-148.732:116:58:56:1988:2118:58,56	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr2	179404786	.	A	T	3301.10	.	AB=0.541353;ABP=4.98585;AC=6;AF=0.5;AN=10;AO=72;CIGAR=1X;DP=1014;DPB=133;DPRA=0;EPP=15.074;EPPR=18.709;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=41.4098;NS=1;NUMALT=1;ODDS=322.944;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2693;QR=2262;RO=61;RPL=17;RPP=46.5604;RPPR=62.8504;RPR=55;RUN=1;SAF=33;SAP=4.09604;SAR=39;SF=9,12,16,20,25;SRF=30;SRP=3.0459;SRR=31;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	0/1:-193.031,0,-154.582:133:61:72:2693:2262:61,72	.	.	1/1:-686.316,-63.6508,0:217:1:215:7979:16:1,215	.	.	.	0/1:-264.638,0,-266.538:200:99:101:3777:3781:99,101	.	.	.	0/1:-276.67,0,-213.567:185:82:101:3843:3114:82,101	.	.	.	.	0/1:-322.933,0,-392.239:279:150:129:4700:5517:150,129	.	.	.	.	.	.	.	.	.	.	.
+chr2	179406003	.	C	A	1174.55	.	AB=0.522222;ABP=3.39634;AC=8;AF=0.5;AN=14;AO=47;CIGAR=1X;DP=569;DPB=90;DPRA=0;EPP=4.16534;EPPR=3.46479;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=42;NS=1;NUMALT=1;ODDS=233.898;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1726;QR=1602;RO=43;RPL=12;RPP=27.4509;RPPR=14.3727;RPR=35;RUN=1;SAF=33;SAP=19.6891;SAR=14;SF=5,9,10,12,16,20,25;SRF=34;SRP=34.5724;SRR=9;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	0/1:-122.748,0,-111.9:90:43:47:1726:1602:43,47	.	.	.	0/1:-86.5165,0,-78.5798:64:30:34:1211:1129:30,34	0/1:-67.0132,0,-92.6396:62:34:28:979:1282:34,28	.	1/1:-301.781,-28.2968,0:94:0:94:3500:0:0,94	.	.	.	0/1:-81.9805,0,-110.291:75:41:34:1201:1532:41,34	.	.	.	0/1:-98.5269,0,-129.837:88:49:39:1439:1804:49,39	.	.	.	.	0/1:-136.761,0,-112.189:96:44:52:1910:1626:44,52	.	.	.	.	.	.	.	.	.	.	.
+chr2	179406191	.	C	T	7770.33	.	AB=0.440729;ABP=13.0492;AC=6;AF=0.5;AN=10;AO=145;CIGAR=1X;DP=2346;DPB=329;DPRA=0;EPP=3.74411;EPPR=3.0103;GTI=0;LEN=1;MEANALT=1;MQM=41.8345;MQMR=41.8533;NS=1;NUMALT=1;ODDS=814;PAIRED=0.993103;PAIREDR=0.98913;PAO=0;PQA=0;PQR=0;PRO=0;QA=5354;QR=6768;RO=184;RPL=86;RPP=13.9276;RPPR=9.80795;RPR=59;RUN=1;SAF=65;SAP=6.37983;SAR=80;SF=9,12,16,20,25;SRF=94;SRP=3.19912;SRR=90;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	0/1:-362.913,0,-488.039:329:184:145:5354:6768:184,145	.	.	1/1:-1784.86,-167.975,0:559:0:558:20690:0:0,558	.	.	.	0/1:-469.529,0,-604.946:413:226:186:6863:8429:226,186	.	.	.	0/1:-657.133,0,-663.189:506:255:251:9360:9408:255,251	.	.	.	.	0/1:-667.012,0,-712.86:539:282:257:9594:10114:282,257	.	.	.	.	.	.	.	.	.	.	.
+chr2	179410548	.	G	T	3214.04	.	AB=0.557522;ABP=9.5055;AC=1;AF=0.5;AN=2;AO=126;CIGAR=1X;DP=226;DPB=226;DPRA=0;EPP=7.42218;EPPR=3.0103;GTI=0;LEN=1;MEANALT=1;MQM=41.9683;MQMR=41.82;NS=1;NUMALT=1;ODDS=564.318;PAIRED=0.992063;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=4679;QR=3779;RO=100;RPL=31;RPP=73.6004;RPPR=53.041;RPR=95;RUN=1;SAF=66;SAP=3.63072;SAR=60;SF=6;SRF=50;SRP=3.0103;SRR=50;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	0/1:-336.61,0,-257.46:226:100:126:4679:3779:100,126	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr2	179410704	.	G	A	10291.20	.	AB=0.479951;ABP=5.88361;AC=1;AF=0.5;AN=2;AO=395;CIGAR=1X;DP=823;DPB=823;DPRA=0;EPP=6.44617;EPPR=4.15452;GTI=0;LEN=1;MEANALT=2;MQM=41.9418;MQMR=41.9555;NS=1;NUMALT=1;ODDS=2369.64;PAIRED=0.997468;PAIREDR=0.997658;PAO=0;PQA=0;PQR=0;PRO=0;QA=14933;QR=15692;RO=427;RPL=157;RPP=39.0787;RPPR=48.9062;RPR=238;RUN=1;SAF=214;SAP=8.99697;SAR=181;SF=25;SRF=228;SRP=7.28713;SRR=199;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-1041.7,0,-1109.34:823:427:395:14933:15692:427,395	.	.	.	.	.	.	.	.	.	.	.
+chr2	179412442	.	A	G	3404.00	.	AB=0.456026;ABP=8.16666;AC=1;AF=0.5;AN=2;AO=140;CIGAR=1X;DP=307;DPB=307;DPRA=0;EPP=35.8306;EPPR=34.6085;GTI=0;LEN=1;MEANALT=2;MQM=41.6143;MQMR=41.7576;NS=1;NUMALT=1;ODDS=783.799;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=5110;QR=6214;RO=165;RPL=64;RPP=5.24381;RPPR=3.33931;RPR=76;RUN=1;SAF=73;SAP=3.56868;SAR=67;SF=16;SRF=88;SRP=4.60271;SRR=77;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-351.297,0,-445.158:307:165:140:5110:6214:165,140	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr2	179412772	.	T	C	2930.08	.	AB=0.485477;ABP=3.4518;AC=1;AF=0.5;AN=2;AO=117;CIGAR=1X;DP=241;DPB=241;DPRA=0;EPP=8.37402;EPPR=23.254;GTI=0;LEN=1;MEANALT=1;MQM=41.6496;MQMR=41.9677;NS=1;NUMALT=1;ODDS=674.677;PAIRED=0.991453;PAIREDR=0.983871;PAO=0;PQA=0;PQR=0;PRO=0;QA=4358;QR=4557;RO=124;RPL=49;RPP=9.71031;RPPR=4.76149;RPR=68;RUN=1;SAF=74;SAP=20.8461;SAR=43;SF=9;SRF=70;SRP=7.49334;SRR=54;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	0/1:-302.731,0,-322.536:241:124:117:4358:4557:124,117	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr2	179412966	.	G	A	4172.30	.	AB=0.547945;ABP=8.84055;AC=1;AF=0.5;AN=2;AO=160;CIGAR=1X;DP=292;DPB=292;DPRA=0;EPP=10.8276;EPPR=14.1309;GTI=0;LEN=1;MEANALT=1;MQM=41.6;MQMR=42;NS=1;NUMALT=1;ODDS=762.652;PAIRED=0.9625;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=5966;QR=4945;RO=132;RPL=85;RPP=4.36747;RPPR=14.1309;RPR=75;RUN=1;SAF=79;SAP=3.06459;SAR=81;SF=9;SRF=66;SRP=3.0103;SRR=66;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	0/1:-425.666,0,-340.828:292:132:160:5966:4945:132,160	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr2	179413110	.	G	A	11753.85	.	AB=0.480634;ABP=4.86064;AC=6;AF=0.5;AN=10;AO=273;CIGAR=1X;DP=3578;DPB=568;DPRA=0;EPP=23.6989;EPPR=3.01771;GTI=0;LEN=1;MEANALT=2;MQM=41.8462;MQMR=41.9795;NS=1;NUMALT=1;ODDS=1578.29;PAIRED=0.996337;PAIREDR=0.996587;PAO=0;PQA=0;PQR=0;PRO=0;QA=10127;QR=10620;RO=293;RPL=88;RPP=77.8505;RPPR=38.2949;RPR=185;RUN=1;SAF=164;SAP=27.0715;SAR=109;SF=9,12,16,20,25;SRF=172;SRP=22.2867;SRR=121;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	0/1:-705.127,0,-750.445:568:293:273:10127:10620:293,273	.	.	1/1:-2528.96,-233.789,0:789:1:788:29391:39:1,788	.	.	.	0/1:-756.434,0,-776.637:588:298:290:10810:11016:298,290	.	.	.	0/1:-911.27,0,-936.863:709:360:346:13026:13327:360,346	.	.	.	.	0/1:-1074.37,0,-1315.25:924:504:420:15637:18392:504,420	.	.	.	.	.	.	.	.	.	.	.
+chr2	179413452	.	G	A	4479.94	.	AB=0.514045;ABP=3.62026;AC=1;AF=0.5;AN=2;AO=183;CIGAR=1X;DP=356;DPB=356;DPRA=0;EPP=8.24319;EPPR=4.52908;GTI=0;LEN=1;MEANALT=1;MQM=41.4098;MQMR=41.896;NS=1;NUMALT=1;ODDS=990.454;PAIRED=0.989071;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=6616;QR=6308;RO=173;RPL=115;RPP=29.2222;RPPR=24.11;RPR=68;RUN=1;SAF=77;SAP=12.9896;SAR=106;SF=6;SRF=79;SRP=5.83447;SRR=94;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	0/1:-459.273,0,-439.787:356:173:183:6616:6308:173,183	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr2	179421694	.	A	G	6540.89	.	AB=0.473171;ABP=5.5737;AC=9;AF=0.5;AN=16;AO=194;CIGAR=1X;DP=3427;DPB=410;DPRA=0;EPP=15.9496;EPPR=13.3047;GTI=0;LEN=1;MEANALT=1;MQM=41.8041;MQMR=42;NS=1;NUMALT=1;ODDS=1112.4;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=7140;QR=8042;RO=216;RPL=114;RPP=15.9496;RPPR=5.5839;RPR=80;RUN=1;SAF=100;SAP=3.41325;SAR=94;SF=5,9,10,12,16,20,25,27;SRF=114;SRP=4.45795;SRR=102;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	0/1:-493.125,0,-571.307:410:216:194:7140:8042:216,194	.	.	.	0/1:-398.611,0,-372.124:296:143:151:5633:5357:143,151	0/1:-406.59,0,-464.926:329:173:156:5860:6533:173,156	.	1/1:-1625.35,-142.977,0:508:3:505:18933:110:3,505	.	.	.	0/1:-501.013,0,-529.859:389:200:189:7166:7493:200,189	.	.	.	0/1:-647.154,0,-584.341:467:223:244:9116:8423:223,244	.	.	.	.	0/1:-677.632,0,-850.215:585:318:266:9874:11867:318,266	.	0/1:-559.202,0,-592.806:443:227:215:8011:8394:227,215	.	.	.	.	.	.	.	.	.
+chr2	179423099	.	A	G	2915.54	.	AB=0.43554;ABP=13.3683;AC=1;AF=0.5;AN=2;AO=125;CIGAR=1X;DP=287;DPB=287;DPRA=0;EPP=9.28151;EPPR=7.35324;GTI=0;LEN=1;MEANALT=1;MQM=41.968;MQMR=41.537;NS=1;NUMALT=1;ODDS=671.329;PAIRED=1;PAIREDR=0.987654;PAO=0;PQA=0;PQR=0;PRO=0;QA=4483;QR=5933;RO=162;RPL=43;RPP=29.4328;RPPR=18.5055;RPR=82;RUN=1;SAF=75;SAP=13.8677;SAR=50;SF=27;SRF=84;SRP=3.49285;SRR=78;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-302.829,0,-424.948:287:162:125:4483:5933:162,125	.	.	.	.	.	.	.	.	.
+chr2	179424600	.	T	C	3674.35	.	AB=0.453704;ABP=9.04217;AC=1;AF=0.5;AN=2;AO=147;CIGAR=1X;DP=324;DPB=324;DPRA=0;EPP=8.34296;EPPR=30.1108;GTI=0;LEN=1;MEANALT=1;MQM=41.8503;MQMR=41.9887;NS=1;NUMALT=1;ODDS=846.051;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=5504;QR=6644;RO=177;RPL=93;RPP=25.4784;RPPR=45.7159;RPR=54;RUN=1;SAF=75;SAP=3.14325;SAR=72;SF=9;SRF=85;SRP=3.61144;SRR=92;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	0/1:-377.741,0,-476.567:324:177:147:5504:6644:177,147	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr2	179427186	.	A	G	6094.05	.	AB=0.446429;ABP=12.7819;AC=9;AF=0.5;AN=16;AO=175;CIGAR=1X;DP=3301;DPB=392;DPRA=0;EPP=5.80219;EPPR=3.17115;GTI=0;LEN=1;MEANALT=2;MQM=41.8286;MQMR=41.7315;NS=1;NUMALT=1;ODDS=979.235;PAIRED=1;PAIREDR=0.990741;PAO=0;PQA=0;PQR=0;PRO=0;QA=6390;QR=7796;RO=216;RPL=110;RPP=28.1373;RPPR=12.0581;RPR=65;RUN=1;SAF=81;SAP=5.10732;SAR=94;SF=5,9,10,12,16,20,25,27;SRF=109;SRP=3.05051;SRR=107;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	0/1:-436.277,0,-555.444:392:216:175:6390:7796:216,175	.	.	.	0/1:-316.461,0,-357.563:266:140:125:4574:5041:140,125	0/1:-330.169,0,-446.241:299:169:130:4845:6227:169,130	.	1/1:-1544.49,-142.372,0:496:2:494:17910:76:2,494	.	.	.	0/1:-479.053,0,-400.353:336:155:181:6706:5797:155,181	.	.	.	0/1:-524.737,0,-490.231:395:188:206:7428:7059:188,206	.	.	.	.	0/1:-718.97,0,-795.404:598:312:286:10372:11261:312,286	.	0/1:-594.788,0,-661.739:519:268:246:8624:9428:268,246	.	.	.	.	.	.	.	.	.
+chr2	179427536	.	T	C	4658.18	.	AB=0.469388;ABP=5.40335;AC=9;AF=0.5;AN=16;AO=138;CIGAR=1X;DP=2548;DPB=294;DPRA=0;EPP=15.3468;EPPR=5.73856;GTI=0;LEN=1;MEANALT=1;MQM=41.971;MQMR=41.7628;NS=1;NUMALT=1;ODDS=788.398;PAIRED=0.992754;PAIREDR=0.987179;PAO=0;PQA=0;PQR=0;PRO=0;QA=5121;QR=5703;RO=156;RPL=43;RPP=45.5586;RPPR=75.17;RPR=95;RUN=1;SAF=72;SAP=3.57677;SAR=66;SF=5,9,10,12,16,20,25,27;SRF=87;SRP=7.52028;SRR=69;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	0/1:-355.093,0,-402.658:294:156:138:5121:5703:156,138	.	.	.	0/1:-325.16,0,-295.201:239:113:125:4577:4247:113,125	0/1:-356.175,0,-262.449:233:102:131:4921:3877:102,131	.	1/1:-1057.98,-101.146,0:337:0:336:12269:0:0,336	.	.	.	0/1:-288.368,0,-369.791:251:136:113:4195:5151:136,113	.	.	.	0/1:-409.176,0,-422.175:316:158:157:5821:6002:158,157	.	.	.	.	0/1:-530.838,0,-615.024:446:234:212:7672:8682:234,212	.	0/1:-497.372,0,-612.874:432:234:198:7225:8589:234,198	.	.	.	.	.	.	.	.	.
+chr2	179429004	.	G	A	3828.94	.	AB=0.459941;ABP=7.70764;AC=1;AF=0.5;AN=2;AO=155;CIGAR=1X;DP=337;DPB=337;DPRA=0;EPP=24.3187;EPPR=9.88265;GTI=0;LEN=1;MEANALT=1;MQM=41.8839;MQMR=41.8626;NS=1;NUMALT=1;ODDS=881.646;PAIRED=1;PAIREDR=0.989011;PAO=0;PQA=0;PQR=0;PRO=0;QA=5752;QR=6589;RO=182;RPL=56;RPP=28.9139;RPPR=32.8382;RPR=99;RUN=1;SAF=63;SAP=14.7923;SAR=92;SF=27;SRF=85;SRP=4.72839;SRR=97;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-395.328,0,-470.732:337:182:155:5752:6589:182,155	.	.	.	.	.	.	.	.	.
+chr2	179430060	.	G	T	4402.65	.	AB=0.452685;ABP=10.6132;AC=1;AF=0.5;AN=2;AO=177;CIGAR=1X;DP=391;DPB=391;DPRA=0;EPP=3.31701;EPPR=4.47148;GTI=0;LEN=1;MEANALT=1;MQM=41.9774;MQMR=41.8178;NS=1;NUMALT=1;ODDS=1013.75;PAIRED=0.99435;PAIREDR=0.990654;PAO=0;PQA=0;PQR=0;PRO=0;QA=6558;QR=7987;RO=214;RPL=108;RPP=21.6702;RPPR=4.99913;RPR=69;RUN=1;SAF=75;SAP=11.9538;SAR=102;SF=27;SRF=93;SRP=10.9656;SRR=121;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-449.978,0,-570.592:391:214:177:6558:7987:214,177	.	.	.	.	.	.	.	.	.
+chr2	179430997	.	G	A	6175.25	.	AB=0.482574;ABP=3.99416;AC=8;AF=0.5;AN=14;AO=180;CIGAR=1X;DP=2673;DPB=373;DPRA=0;EPP=7.83579;EPPR=21.9235;GTI=0;LEN=1;MEANALT=1;MQM=41.9889;MQMR=41.772;NS=1;NUMALT=1;ODDS=1050.89;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=6679;QR=7050;RO=193;RPL=71;RPP=20.4303;RPPR=7.07197;RPR=109;RUN=1;SAF=97;SAP=5.37479;SAR=83;SF=5,9,10,12,16,20,25;SRF=91;SRP=4.37169;SRR=102;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	0/1:-466.02,0,-499.09:373:193:180:6679:7050:193,180	.	.	.	0/1:-354.878,0,-316.1:263:124:138:5019:4553:124,138	0/1:-417.892,0,-363.896:302:144:158:5879:5232:144,158	.	1/1:-1325.88,-124.024,0:412:0:412:15365:0:0,412	.	.	.	0/1:-489.725,0,-392.381:337:153:183:6837:5700:153,183	.	.	.	0/1:-533.406,0,-471.63:386:183:203:7526:6819:183,203	.	.	.	.	0/1:-809.353,0,-724.555:600:290:309:11476:10463:290,309	.	.	.	.	.	.	.	.	.	.	.
+chr2	179431594	.	A	G	5400.20	.	AB=0.502315;ABP=3.03041;AC=1;AF=0.5;AN=2;AO=217;CIGAR=1X;DP=432;DPB=432;DPRA=0;EPP=56.3365;EPPR=6.29795;GTI=0;LEN=1;MEANALT=2;MQM=41.7972;MQMR=41.9907;NS=1;NUMALT=1;ODDS=1236.22;PAIRED=0.995392;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=7919;QR=7853;RO=214;RPL=136;RPP=33.2808;RPPR=67.9515;RPR=81;RUN=1;SAF=91;SAP=15.2686;SAR=126;SF=27;SRF=95;SRP=8.85501;SRR=119;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-556.021,0,-550.724:432:214:217:7919:7853:214,217	.	.	.	.	.	.	.	.	.
+chr2	179431797	.	A	T	3881.41	.	AB=0.511254;ABP=3.35243;AC=2;AF=0.5;AN=4;AO=159;CIGAR=1X;DP=577;DPB=311;DPRA=0;EPP=4.11652;EPPR=19.5249;GTI=0;LEN=1;MEANALT=1;MQM=41.8428;MQMR=41.8816;NS=1;NUMALT=1;ODDS=870.633;PAIRED=1;PAIREDR=0.993421;PAO=0;PQA=0;PQR=0;PRO=0;QA=5899;QR=5568;RO=152;RPL=74;RPP=4.6628;RPPR=25.8679;RPR=85;RUN=1;SAF=76;SAP=3.6795;SAR=83;SF=5,10;SRF=73;SRP=3.5246;SRR=79;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	0/1:-415.218,0,-389.062:311:152:159:5899:5568:152,159	.	.	.	.	0/1:-376.995,0,-303.181:266:123:143:5317:4424:123,143	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr2	179432185	.	A	G	6029.15	.	AB=0;ABP=0;AC=8;AF=1;AN=14;AO=337;CIGAR=1X;DP=2704;DPB=337;DPRA=0;EPP=91.2159;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=41.8754;MQMR=0;NS=1;NUMALT=1;ODDS=471.786;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=12244;QR=0;RO=0;RPL=122;RPP=58.7405;RPPR=0;RPR=215;RUN=1;SAF=181;SAP=7.03751;SAR=156;SF=3,5,6,10,24,25,27;SRF=0;SRP=0;SRR=0;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	1/1:-1063.41,-101.447,0:337:0:337:12244:0:0,337	.	0/1:-527.305,0,-514.743:408:199:207:7471:7349:199,207	0/1:-441.286,0,-231.522:267:100:167:5999:3588:100,167	.	.	.	0/1:-479.48,0,-411.141:351:167:183:6734:5951:167,183	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-271.806,0,-200.487:185:80:105:3761:2948:80,105	0/1:-841.345,0,-700.46:618:287:328:11799:10194:287,328	.	0/1:-697.966,0,-655.814:538:259:276:9873:9412:259,276	.	.	.	.	.	.	.	.	.
+chr2	179433221	.	T	C	7788.40	.	AB=0.511785;ABP=3.72681;AC=1;AF=0.5;AN=2;AO=304;CIGAR=1X;DP=594;DPB=594;DPRA=0;EPP=20.8678;EPPR=17.6074;GTI=0;LEN=1;MEANALT=2;MQM=41.9803;MQMR=41.9236;NS=1;NUMALT=1;ODDS=1639.98;PAIRED=1;PAIREDR=0.996528;PAO=0;PQA=0;PQR=0;PRO=0;QA=11245;QR=10455;RO=288;RPL=202;RPP=74.4403;RPPR=66.8275;RPR=102;RUN=1;SAF=151;SAP=3.03887;SAR=153;SF=27;SRF=152;SRP=4.9405;SRR=136;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-794.579,0,-727.017:594:288:304:11245:10455:288,304	.	.	.	.	.	.	.	.	.
+chr2	179433580	.	T	C	5800.32	.	AB=0.467181;ABP=7.85629;AC=1;AF=0.5;AN=2;AO=242;CIGAR=1X;DP=518;DPB=518;DPRA=0;EPP=31.1497;EPPR=10.5986;GTI=0;LEN=1;MEANALT=2;MQM=41.8388;MQMR=41.7927;NS=1;NUMALT=1;ODDS=1335.57;PAIRED=1;PAIREDR=0.989091;PAO=0;PQA=0;PQR=0;PRO=0;QA=8702;QR=9988;RO=275;RPL=156;RPP=46.9781;RPPR=40.6044;RPR=86;RUN=1;SAF=87;SAP=44.5016;SAR=155;SF=27;SRF=85;SRP=90.0666;SRR=190;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-598.369,0,-708.684:518:275:242:8702:9988:275,242	.	.	.	.	.	.	.	.	.
+chr2	179434139	.	A	G	4106.22	.	AB=0.459834;ABP=8.06905;AC=1;AF=0.5;AN=2;AO=166;CIGAR=1X;DP=361;DPB=361;DPRA=0;EPP=3.48122;EPPR=3.29158;GTI=0;LEN=1;MEANALT=3;MQM=41.8373;MQMR=41.6995;NS=1;NUMALT=1;ODDS=945.491;PAIRED=0.993976;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=6056;QR=6725;RO=193;RPL=89;RPP=4.89399;RPPR=15.2628;RPR=77;RUN=1;SAF=81;SAP=3.2196;SAR=85;SF=27;SRF=97;SRP=3.02155;SRR=96;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-417.416,0,-474.631:361:193:166:6056:6725:193,166	.	.	.	.	.	.	.	.	.
+chr2	179434516	.	C	T	3967.72	.	AB=0.533546;ABP=6.06979;AC=2;AF=0.5;AN=4;AO=167;CIGAR=1X;DP=589;DPB=313;DPRA=0;EPP=5.20778;EPPR=8.41652;GTI=0;LEN=1;MEANALT=2;MQM=41.988;MQMR=41.9862;NS=1;NUMALT=1;ODDS=831.602;PAIRED=0.994012;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=6259;QR=5340;RO=145;RPL=72;RPP=9.8888;RPPR=9.61457;RPR=95;RUN=1;SAF=82;SAP=3.12733;SAR=85;SF=5,10;SRF=70;SRP=3.38469;SRR=75;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	0/1:-446.841,0,-369.614:313:145:167:6259:5340:145,167	.	.	.	.	0/1:-362.112,0,-358.728:276:139:137:5152:5082:139,137	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr2	179436020	.	G	A	5759.52	.	AB=0.515152;ABP=3.47092;AC=6;AF=0.5;AN=10;AO=119;CIGAR=1X;DP=1677;DPB=231;DPRA=0;EPP=5.21827;EPPR=3.32051;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=41.8214;NS=1;NUMALT=1;ODDS=657.365;PAIRED=1;PAIREDR=0.991071;PAO=0;PQA=0;PQR=0;PRO=0;QA=4415;QR=4193;RO=112;RPL=69;RPP=9.59771;RPPR=4.94911;RPR=50;RUN=1;SAF=51;SAP=8.28388;SAR=68;SF=9,12,16,20,25;SRF=45;SRP=12.3942;SRR=67;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	0/1:-312.304,0,-293.346:231:112:119:4415:4193:112,119	.	.	1/1:-1171.69,-109.274,0:363:0:363:13578:0:0,363	.	.	.	0/1:-324.862,0,-422.06:285:158:127:4750:5867:158,127	.	.	.	0/1:-460.767,0,-408.27:331:159:171:6495:5876:159,171	.	.	.	.	0/1:-656.391,0,-561.49:467:221:246:9240:8120:221,246	.	.	.	.	.	.	.	.	.	.	.
+chr2	179440029	.	G	A	9178.93	.	AB=0;ABP=0;AC=8;AF=1;AN=14;AO=590;CIGAR=1X;DP=4232;DPB=594;DPRA=0;EPP=159.194;EPPR=0;GTI=0;LEN=1;MEANALT=3;MQM=41.8102;MQMR=0;NS=1;NUMALT=1;ODDS=822.519;PAIRED=0.99661;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=20798;QR=0;RO=0;RPL=196;RPP=147.299;RPPR=0;RPR=394;RUN=1;SAF=294;SAP=3.02502;SAR=296;SF=3,5,6,10,24,25,27;SRF=0;SRP=0;SRR=0;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	1/1:-1811.51,-177.608,0:594:0:590:20798:0:0,590	.	0/1:-927.389,0,-715.121:669:297:370:13023:10511:297,370	0/1:-593.862,0,-454.524:431:192:237:8282:6702:192,237	.	.	.	0/1:-767.87,0,-609.241:556:250:306:10706:8926:250,306	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-436.212,0,-334.906:314:139:175:6058:4920:139,175	0/1:-1070.68,0,-1217.93:941:484:455:15493:17231:484,455	.	0/1:-1003.46,0,-742.628:727:314:408:14014:11040:314,408	.	.	.	.	.	.	.	.	.
+chr2	179441295	.	T	C	239.93	.	AB=0.180791;ABP=159.663;AC=1;AF=0.5;AN=2;AO=32;CIGAR=1X;DP=177;DPB=177;DPRA=0;EPP=5.45321;EPPR=9.04217;GTI=0;LEN=1;MEANALT=2;MQM=42;MQMR=41.9722;NS=1;NUMALT=1;ODDS=55.245;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1154;QR=5165;RO=144;RPL=11;RPP=9.79615;RPPR=16.582;RPR=21;RUN=1;SAF=18;SAP=4.09604;SAR=14;SF=21;SRF=65;SRP=5.96592;SRR=79;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-47.4159,0,-396.815:177:144:32:1154:5165:144,32	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr2	179441947	.	C	T	886.08	.	AB=0.507042;ABP=3.04088;AC=1;AF=0.5;AN=2;AO=36;CIGAR=1X;DP=71;DPB=71;DPRA=0;EPP=9.04217;EPPR=10.5174;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=42;NS=1;NUMALT=1;ODDS=197.607;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1331;QR=1300;RO=35;RPL=19;RPP=3.25157;RPPR=3.07234;RPR=17;RUN=1;SAF=14;SAP=6.8707;SAR=22;SF=24;SRF=14;SRP=6.05036;SRR=21;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-94.3152,0,-91.5581:71:35:36:1331:1300:35,36	.	.	.	.	.	.	.	.	.	.	.	.
+chr2	179442546	.	A	G	2308.17	.	AB=0.487685;ABP=3.27772;AC=1;AF=0.5;AN=2;AO=99;CIGAR=1X;DP=203;DPB=203;DPRA=0;EPP=9.34924;EPPR=39.8418;GTI=0;LEN=1;MEANALT=1;MQM=41.9394;MQMR=42;NS=1;NUMALT=1;ODDS=531.476;PAIRED=0.979798;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3468;QR=3654;RO=104;RPL=69;RPP=36.372;RPPR=55.2092;RPR=30;RUN=1;SAF=49;SAP=3.03223;SAR=50;SF=10;SRF=38;SRP=19.3799;SRR=66;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	0/1:-241.411,0,-257.379:203:104:99:3468:3654:104,99	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr2	179444137	.	A	G	2500.13	.	AB=0.42515;ABP=11.1371;AC=8;AF=0.5;AN=14;AO=71;CIGAR=1X;DP=1203;DPB=167;DPRA=0;EPP=4.50892;EPPR=27.9022;GTI=0;LEN=1;MEANALT=2;MQM=41.5211;MQMR=41.9789;NS=1;NUMALT=1;ODDS=391.308;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2672;QR=3610;RO=95;RPL=28;RPP=9.89173;RPPR=27.9022;RPR=43;RUN=1;SAF=24;SAP=19.1893;SAR=47;SF=5,9,10,12,16,20,25;SRF=36;SRP=15.102;SRR=59;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	0/1:-179.434,0,-261.504:167:95:71:2672:3610:95,71	.	.	.	0/1:-115.151,0,-206.911:125:76:48:1761:2826:76,48	0/1:-191.884,0,-195.061:146:72:74:2719:2769:72,74	.	1/1:-545.739,-50.573,0:168:0:168:6319:0:0,168	.	.	.	0/1:-208.807,0,-173.116:144:66:78:2908:2520:66,78	.	.	.	0/1:-208.256,0,-184.059:152:72:80:2993:2667:72,80	.	.	.	.	0/1:-390.352,0,-386.714:301:149:152:5547:5544:149,152	.	.	.	.	.	.	.	.	.	.	.
+chr2	179444289	.	A	G	2813.46	.	AB=0.567308;ABP=11.1951;AC=1;AF=0.5;AN=2;AO=118;CIGAR=1X;DP=208;DPB=208;DPRA=0;EPP=38.6372;EPPR=29.5803;GTI=0;LEN=1;MEANALT=2;MQM=41.8051;MQMR=41.7753;NS=1;NUMALT=1;ODDS=480.778;PAIRED=1;PAIREDR=0.988764;PAO=0;PQA=0;PQR=0;PRO=0;QA=4154;QR=3258;RO=89;RPL=28;RPP=73.7488;RPPR=18.2594;RPR=90;RUN=1;SAF=67;SAP=7.72129;SAR=51;SF=27;SRF=47;SRP=3.62026;SRR=42;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-299.443,0,-219.533:208:89:118:4154:3258:89,118	.	.	.	.	.	.	.	.	.
+chr2	179444768	.	C	G	11805.58	.	AB=0;ABP=0;AC=26;AF=1;AN=26;AO=353;CIGAR=1X;DP=4843;DPB=353;DPRA=0;EPP=30.6243;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=41.9235;MQMR=0;NS=1;NUMALT=1;ODDS=493.967;PAIRED=0.997167;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=13156;QR=0;RO=0;RPL=173;RPP=3.31172;RPPR=0;RPR=180;RUN=1;SAF=154;SAP=15.467;SAR=199;SF=0,3,5,6,9,10,12,16,20,21,24,25,27;SRF=0;SRP=0;SRR=0;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	1/1:-1135.62,-106.264,0:353:0:353:13156:0:0,353	.	.	1/1:-1045.49,-96.6306,0:322:0:321:12103:0:0,321	.	1/1:-1275.69,-119.214,0:401:1:400:14782:15:1,400	1/1:-956.549,-90.61,0:301:0:301:11059:0:0,301	.	.	1/1:-1045.34,-96.3356,0:325:1:324:12141:15:1,324	1/1:-1242.12,-116.298,0:393:1:390:14397:16:1,390	.	1/1:-1455.93,-136.433,0:459:1:457:16895:16:1,457	.	.	.	1/1:-1245.19,-114.993,0:382:0:382:14432:0:0,382	.	.	.	1/1:-1258.71,-117.402,0:390:0:390:14587:0:0,390	1/1:-666.668,-63.5173,0:212:0:211:7706:0:0,211	.	.	1/1:-651.321,-61.4101,0:204:0:204:7523:0:0,204	1/1:-1925.44,-182.725,0:607:0:607:22273:0:0,607	.	1/1:-1554.17,-148.709,0:494:0:494:17976:0:0,494	.	.	.	.	.	.	.	.	.
+chr2	179444939	.	C	T	3044.00	.	AB=0.45977;ABP=5.45633;AC=8;AF=0.5;AN=14;AO=80;CIGAR=1X;DP=1415;DPB=174;DPRA=0;EPP=30.8051;EPPR=14.1911;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=42;NS=1;NUMALT=1;ODDS=439.506;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2930;QR=3527;RO=94;RPL=51;RPP=16.1477;RPPR=21.1213;RPR=29;RUN=1;SAF=35;SAP=5.72464;SAR=45;SF=5,9,10,12,16,20,25;SRF=45;SRP=3.37991;SRR=49;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	0/1:-201.894,0,-252.894:174:94:80:2930:3527:94,80	.	.	.	0/1:-196.039,0,-219.353:161:84:77:2838:3088:84,77	0/1:-204.03,0,-197.561:155:77:78:2891:2814:77,78	.	1/1:-655.946,-61.4101,0:206:0:204:7561:0:0,204	.	.	.	0/1:-248.344,0,-228.356:182:88:94:3496:3287:88,94	.	.	.	0/1:-280.737,0,-228.017:198:89:108:3915:3325:89,108	.	.	.	.	0/1:-426.627,0,-438.317:339:170:167:6082:6303:170,167	.	.	.	.	.	.	.	.	.	.	.
+chr2	179447848	.	T	C	6821.33	.	AB=0.422319;ABP=26.963;AC=9;AF=0.5;AN=16;AO=193;CIGAR=1X;DP=3769;DPB=457;DPRA=0;EPP=100.322;EPPR=80.6962;GTI=0;LEN=1;MEANALT=2;MQM=41.772;MQMR=41.9848;NS=1;NUMALT=1;ODDS=1072.42;PAIRED=0.989637;PAIREDR=0.992395;PAO=0;PQA=0;PQR=0;PRO=0;QA=7208;QR=9854;RO=263;RPL=109;RPP=10.0423;RPPR=4.40566;RPR=84;RUN=1;SAF=97;SAP=3.02155;SAR=96;SF=5,9,10,12,16,20,25,27;SRF=131;SRP=3.01856;SRR=132;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	0/1:-486.028,0,-715.291:457:263:193:7208:9854:263,193	.	.	.	0/1:-399.155,0,-531.749:355:199:156:5844:7377:199,156	0/1:-453.311,0,-486.635:356:182:174:6469:6872:182,174	.	1/1:-1627.27,-141.889,0:515:4:511:18961:147:4,511	.	.	.	0/1:-450.823,0,-547.685:377:204:173:6521:7647:204,173	.	.	.	0/1:-545.004,0,-630.041:457:241:215:7891:8868:241,215	.	.	.	.	0/1:-973.73,0,-779.567:675:307:367:13586:11348:307,367	.	0/1:-715.3,0,-766.793:577:294:283:10259:10856:294,283	.	.	.	.	.	.	.	.	.
+chr2	179448315	.	A	C	1339.74	.	AB=0.475;ABP=3.66174;AC=1;AF=0.5;AN=2;AO=57;CIGAR=1X;DP=120;DPB=120;DPRA=0;EPP=4.877;EPPR=3.32051;GTI=0;LEN=1;MEANALT=1;MQM=41.6491;MQMR=41.127;NS=1;NUMALT=1;ODDS=308.486;PAIRED=0.982456;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2073;QR=2262;RO=63;RPL=15;RPP=30.7823;RPPR=28.1373;RPR=42;RUN=1;SAF=39;SAP=19.8106;SAR=18;SF=27;SRF=51;SRP=55.4358;SRR=12;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-143.918,0,-159.609:120:63:57:2073:2262:63,57	.	.	.	.	.	.	.	.	.
+chr2	179449131	.	G	A	6489.65	.	AB=0.466431;ABP=8.55024;AC=1;AF=0.5;AN=2;AO=264;CIGAR=1X;DP=566;DPB=566;DPRA=0;EPP=21.9613;EPPR=38.4777;GTI=0;LEN=1;MEANALT=2;MQM=41.9091;MQMR=41.7567;NS=1;NUMALT=1;ODDS=1494.3;PAIRED=1;PAIREDR=0.993333;PAO=0;PQA=0;PQR=0;PRO=0;QA=9605;QR=10831;RO=300;RPL=97;RPP=43.3141;RPPR=69.7179;RPR=167;RUN=1;SAF=145;SAP=8.57059;SAR=119;SF=25;SRF=157;SRP=4.429;SRR=143;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-663.381,0,-766.66:566:300:264:9605:10831:300,264	.	.	.	.	.	.	.	.	.	.	.
+chr2	179449186	.	G	A	4114.99	.	AB=0.486405;ABP=3.54169;AC=1;AF=0.5;AN=2;AO=161;CIGAR=1X;DP=331;DPB=331;DPRA=0;EPP=3.67118;EPPR=3.02315;GTI=0;LEN=1;MEANALT=2;MQM=41.8323;MQMR=41.7633;NS=1;NUMALT=1;ODDS=947.512;PAIRED=1;PAIREDR=0.982249;PAO=0;PQA=0;PQR=0;PRO=0;QA=6035;QR=6337;RO=169;RPL=102;RPP=27.9485;RPPR=11.0409;RPR=59;RUN=1;SAF=81;SAP=3.02379;SAR=80;SF=10;SRF=74;SRP=8.67669;SRR=95;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	0/1:-421.081,0,-448.044:331:169:161:6035:6337:169,161	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr2	179451420	.	G	A	6978.11	.	AB=0.512931;ABP=3.68421;AC=7;AF=0.5;AN=12;AO=238;CIGAR=1X;DP=2547;DPB=464;DPRA=0;EPP=42.7537;EPPR=23.3414;GTI=0;LEN=1;MEANALT=1;MQM=41.9748;MQMR=41.8319;NS=1;NUMALT=1;ODDS=1346.04;PAIRED=0.991597;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=9035;QR=8525;RO=226;RPL=106;RPP=9.17801;RPPR=3.0103;RPR=132;RUN=1;SAF=114;SAP=3.92268;SAR=124;SF=5,9,10,12,20,25;SRF=107;SRP=4.39389;SRR=119;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	0/1:-640.59,0,-594.079:464:226:238:9035:8525:226,238	.	.	.	0/1:-377.303,0,-361.394:280:137:142:5342:5155:137,142	0/1:-381.579,0,-461.677:319:173:146:5530:6462:173,146	.	1/1:-1648.7,-150.971,0:514:1:512:19187:39:1,512	.	.	.	.	.	.	.	0/1:-492.739,0,-633.341:435:240:194:7270:8856:240,194	.	.	.	.	0/1:-723.168,0,-668.46:535:258:276:10256:9620:258,276	.	.	.	.	.	.	.	.	.	.	.
+chr2	179451906	.	G	A	4869.94	.	AB=0.517615;ABP=4.00482;AC=1;AF=0.5;AN=2;AO=191;CIGAR=1X;DP=369;DPB=369;DPRA=0;EPP=26.0325;EPPR=4.49475;GTI=0;LEN=1;MEANALT=2;MQM=41.9895;MQMR=41.774;NS=1;NUMALT=1;ODDS=1038.15;PAIRED=1;PAIREDR=0.988701;PAO=0;PQA=0;PQR=0;PRO=0;QA=7176;QR=6704;RO=177;RPL=50;RPP=97.1567;RPPR=75.7485;RPR=141;RUN=1;SAF=122;SAP=34.9457;SAR=69;SF=0;SRF=104;SRP=14.8;SRR=73;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	0/1:-509.49,0,-466.833:369:177:191:7176:6704:177,191	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr2	179454394	.	A	G	6353.68	.	AB=0.515235;ABP=3.73813;AC=7;AF=0.5;AN=12;AO=186;CIGAR=1X;DP=2414;DPB=361;DPRA=0;EPP=8.6608;EPPR=7.48974;GTI=0;LEN=1;MEANALT=1;MQM=41.9785;MQMR=41.8743;NS=1;NUMALT=1;ODDS=1036.43;PAIRED=0.978495;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=6997;QR=6595;RO=175;RPL=69;RPP=29.9085;RPPR=25.9535;RPR=117;RUN=1;SAF=111;SAP=18.1406;SAR=75;SF=5,9,10,12,20,25;SRF=95;SRP=5.80219;SRR=80;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	0/1:-495.868,0,-460.254:361:175:186:6997:6595:175,186	.	.	.	0/1:-293.041,0,-379.806:252:139:113:4285:5273:139,113	0/1:-321.589,0,-454.113:297:168:128:4757:6303:168,128	.	1/1:-1479.6,-140.882,0:468:0:468:17298:0:0,468	.	.	.	.	.	.	.	0/1:-598.803,0,-587.017:451:222:229:8564:8369:222,229	.	.	.	.	0/1:-689.994,0,-816.163:585:310:274:10045:11522:310,274	.	.	.	.	.	.	.	.	.	.	.
+chr2	179455207	.	T	C	5977.25	.	AB=0.437956;ABP=16.7524;AC=7;AF=0.5;AN=12;AO=180;CIGAR=1X;DP=2391;DPB=411;DPRA=0;EPP=3.05855;EPPR=18.9502;GTI=0;LEN=1;MEANALT=2;MQM=41.6111;MQMR=41.9825;NS=1;NUMALT=1;ODDS=1002.97;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=6637;QR=8530;RO=229;RPL=120;RPP=46.4397;RPPR=20.5433;RPR=60;RUN=1;SAF=77;SAP=11.1654;SAR=103;SF=5,9,10,12,20,25;SRF=101;SRP=9.92298;SRR=128;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	0/1:-449.164,0,-614.768:411:229:180:6637:8530:229,180	.	.	.	0/1:-263.934,0,-382.894:246:142:104:3898:5281:142,104	0/1:-251.472,0,-437.055:264:159:105:3812:5974:159,105	.	1/1:-1358.08,-127.336,0:423:0:423:15695:0:0,423	.	.	.	.	.	.	.	0/1:-537.853,0,-670.246:461:249:211:7831:9399:249,211	.	.	.	.	0/1:-795.774,0,-702.313:586:276:310:11233:10186:276,310	.	.	.	.	.	.	.	.	.	.	.
+chr2	179455631	.	G	A	5038.10	.	AB=0.522546;ABP=4.6749;AC=1;AF=0.5;AN=2;AO=197;CIGAR=1X;DP=377;DPB=377;DPRA=0;EPP=29.4758;EPPR=7.83579;GTI=0;LEN=1;MEANALT=1;MQM=41.6447;MQMR=41.8889;NS=1;NUMALT=1;ODDS=1056.66;PAIRED=0.984772;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=7304;QR=6717;RO=180;RPL=110;RPP=8.84131;RPPR=8.84915;RPR=87;RUN=1;SAF=99;SAP=3.02132;SAR=98;SF=10;SRF=93;SRP=3.44459;SRR=87;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	0/1:-514.343,0,-467.239:377:180:197:7304:6717:180,197	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr2	179457147	.	G	A	4292.28	.	AB=0.472222;ABP=3.9754;AC=5;AF=0.5;AN=8;AO=68;CIGAR=1X;DP=995;DPB=144;DPRA=0;EPP=28.0461;EPPR=22.325;GTI=0;LEN=1;MEANALT=1;MQM=41.6912;MQMR=41.9737;NS=1;NUMALT=1;ODDS=355.179;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2405;QR=2859;RO=76;RPL=24;RPP=15.7837;RPPR=10.3247;RPR=44;RUN=1;SAF=44;SAP=15.7837;SAR=24;SF=9,12,20,25;SRF=41;SRP=4.03889;SRR=35;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	0/1:-165.668,0,-204.144:144:76:68:2405:2859:76,68	.	.	1/1:-862.488,-80.375,0:267:0:267:10035:0:0,267	.	.	.	.	.	.	.	0/1:-281.019,0,-285.701:220:111:107:4006:4070:111,107	.	.	.	.	0/1:-464.53,0,-480.316:364:184:178:6628:6820:184,178	.	.	.	.	.	.	.	.	.	.	.
+chr2	179457856	.	AAGTTA	AA	1395.63	.	AB=0.41958;ABP=11.0432;AC=1;AF=0.5;AN=2;AO=60;CIGAR=1M4D1M;DP=143;DPB=103;DPRA=0;EPP=8.22183;EPPR=32.2045;GTI=0;LEN=4;MEANALT=3;MQM=41.3667;MQMR=41.9012;NS=1;NUMALT=1;ODDS=321.355;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2202;QR=2967;RO=81;RPL=36;RPP=8.22183;RPPR=9.04217;RPR=24;RUN=1;SAF=30;SAP=3.0103;SAR=30;SF=12;SRF=31;SRP=12.6881;SRR=50;TYPE=del	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-147.412,0,-215.177:143:81:60:2202:2967:81,60	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr2	179458591	.	C	T	3667.33	.	AB=0.424242;ABP=11.2356;AC=5;AF=0.5;AN=8;AO=70;CIGAR=1X;DP=933;DPB=165;DPRA=0;EPP=9.09042;EPPR=4.86177;GTI=0;LEN=1;MEANALT=1;MQM=41.7143;MQMR=41.9579;NS=1;NUMALT=1;ODDS=360.851;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2465;QR=3171;RO=95;RPL=30;RPP=6.1124;RPPR=3.03316;RPR=40;RUN=1;SAF=32;SAP=4.12706;SAR=38;SF=9,12,20,25;SRF=43;SRP=4.86177;SRR=52;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	0/1:-164.83,0,-228.548:165:95:70:2465:3171:95,70	.	.	1/1:-694.252,-66.2266,0:221:0:220:8012:0:0,220	.	.	.	.	.	.	.	0/1:-227.171,0,-253.66:195:100:95:3324:3579:100,95	.	.	.	.	0/1:-417.006,0,-432.561:352:180:171:6086:6170:180,171	.	.	.	.	.	.	.	.	.	.	.
+chr2	179462494	.	A	G	3776.96	.	AB=0;ABP=0;AC=8;AF=1;AN=14;AO=214;CIGAR=1X;DP=1710;DPB=217;DPRA=0;EPP=4.47148;EPPR=3.73412;GTI=0;LEN=1;MEANALT=1;MQM=41.9907;MQMR=30;NS=1;NUMALT=1;ODDS=279.014;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=7834;QR=85;RO=3;RPL=153;RPP=88.8951;RPPR=3.73412;RPR=61;RUN=1;SAF=104;SAP=3.37559;SAR=110;SF=3,5,6,10,24,25,27;SRF=1;SRP=3.73412;SRR=2;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	1/1:-673.648,-58.7978,0:217:3:214:7834:85:3,214	.	0/1:-328.426,0,-308.987:247:120:127:4649:4425:120,127	0/1:-181.728,0,-188.963:144:72:71:2582:2682:72,71	.	.	.	0/1:-268.508,0,-227.918:193:90:102:3755:3300:90,102	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-147.781,0,-177.565:124:66:58:2130:2491:66,58	0/1:-586.982,0,-535.865:449:210:239:8293:7755:210,239	.	0/1:-534.117,0,-309.7:336:132:203:7311:4733:132,203	.	.	.	.	.	.	.	.	.
+chr2	179463991	.	C	T	4096.74	.	AB=0.502907;ABP=3.03555;AC=1;AF=0.5;AN=2;AO=173;CIGAR=1X;DP=344;DPB=344;DPRA=0;EPP=3.02285;EPPR=21.455;GTI=0;LEN=1;MEANALT=2;MQM=38.4566;MQMR=40.1471;NS=1;NUMALT=1;ODDS=904.165;PAIRED=0.99422;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=6502;QR=5990;RO=170;RPL=84;RPP=3.3241;RPPR=5.51388;RPR=89;RUN=1;SAF=86;SAP=3.02285;SAR=87;SF=25;SRF=84;SRP=3.06139;SRR=86;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-416.733,0,-401.79:344:170:173:6502:5990:170,173	.	.	.	.	.	.	.	.	.	.	.
+chr2	179464527	.	T	C	3891.36	.	AB=0.477273;ABP=3.79993;AC=7;AF=0.5;AN=12;AO=84;CIGAR=1X;DP=1499;DPB=176;DPRA=0;EPP=9.62812;EPPR=7.63648;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=41.7717;NS=1;NUMALT=1;ODDS=470.665;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3052;QR=3477;RO=92;RPL=48;RPP=6.73282;RPPR=21.515;RPR=36;RUN=1;SAF=34;SAP=9.62812;SAR=50;SF=5,9,10,12,20,25;SRF=33;SRP=18.9659;SRR=59;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	0/1:-212.576,0,-247.162:176:92:84:3052:3477:92,84	.	.	.	0/1:-133.299,0,-306.897:170:111:59:2116:4139:111,59	0/1:-250.931,0,-230.807:188:88:100:3544:3328:88,100	.	1/1:-902.843,-81.0962,0:297:3:294:10507:92:3,294	.	.	.	.	.	.	.	0/1:-356.972,0,-305.097:258:117:141:5024:4436:117,141	.	.	.	.	0/1:-533.728,0,-493.314:410:194:216:7541:7125:194,216	.	.	.	.	.	.	.	.	.	.	.
+chr2	179466017	.	C	T	880.50	.	AB=0.291667;ABP=66.3449;AC=1;AF=0.5;AN=2;AO=49;CIGAR=1X;DP=168;DPB=168;DPRA=0;EPP=35.3165;EPPR=8.28388;GTI=0;LEN=1;MEANALT=1;MQM=41.9592;MQMR=41.9832;NS=1;NUMALT=1;ODDS=202.742;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1782;QR=4271;RO=119;RPL=21;RPP=5.18177;RPPR=6.09416;RPR=28;RUN=1;SAF=24;SAP=3.05462;SAR=25;SF=21;SRF=62;SRP=3.46649;SRR=57;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-104.145,0,-320.476:168:119:49:1782:4271:119,49	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr2	179469697	.	G	C	3261.74	.	AB=0.469091;ABP=5.29232;AC=1;AF=0.5;AN=2;AO=129;CIGAR=1X;DP=275;DPB=275;DPRA=0;EPP=6.79775;EPPR=10.2089;GTI=0;LEN=1;MEANALT=1;MQM=41.6899;MQMR=41.9863;NS=1;NUMALT=1;ODDS=751.044;PAIRED=1;PAIREDR=0.993151;PAO=0;PQA=0;PQR=0;PRO=0;QA=4883;QR=5540;RO=146;RPL=69;RPP=4.37378;RPPR=3.06979;RPR=60;RUN=1;SAF=43;SAP=34.1347;SAR=86;SF=16;SRF=50;SRP=34.4818;SRR=96;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-336.842,0,-395.297:275:146:129:4883:5540:146,129	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr2	179472223	.	A	G	7424.18	.	AB=0.523636;ABP=5.67924;AC=1;AF=0.5;AN=2;AO=288;CIGAR=1X;DP=550;DPB=550;DPRA=0;EPP=3.28173;EPPR=5.41473;GTI=0;LEN=1;MEANALT=2;MQM=41.6493;MQMR=41.8391;NS=1;NUMALT=1;ODDS=1510.71;PAIRED=0.989583;PAIREDR=0.996169;PAO=0;PQA=0;PQR=0;PRO=0;QA=10649;QR=9607;RO=261;RPL=125;RPP=13.8978;RPPR=10.0073;RPR=163;RUN=1;SAF=132;SAP=7.35324;SAR=156;SF=25;SRF=133;SRP=3.2183;SRR=128;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-751.707,0,-664.729:550:261:288:10649:9607:261,288	.	.	.	.	.	.	.	.	.	.	.
+chr2	179472825	.	T	C	1058.91	.	AB=0.44898;ABP=5.22609;AC=1;AF=0.5;AN=2;AO=44;CIGAR=1X;DP=98;DPB=98;DPRA=0;EPP=22.751;EPPR=13.3047;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=41.6111;NS=1;NUMALT=1;ODDS=243.824;PAIRED=0.977273;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1665;QR=1956;RO=54;RPL=23;RPP=3.20771;RPPR=7.03155;RPR=21;RUN=1;SAF=17;SAP=7.94546;SAR=27;SF=5;SRF=21;SRP=8.80089;SRR=33;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	0/1:-114.477,0,-138.847:98:54:44:1665:1956:54,44	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr2	179472908	.	T	C	734.14	.	AB=0.373737;ABP=16.7191;AC=1;AF=0.5;AN=2;AO=37;CIGAR=1X;DP=99;DPB=99;DPRA=0;EPP=3.5385;EPPR=3.0103;GTI=0;LEN=1;MEANALT=1;MQM=40.8919;MQMR=41.6935;NS=1;NUMALT=1;ODDS=169.042;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1311;QR=2215;RO=62;RPL=10;RPP=19.9713;RPPR=23.184;RPR=27;RUN=1;SAF=24;SAP=10.1116;SAR=13;SF=21;SRF=40;SRP=14.358;SRR=22;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-83.0016,0,-162.492:99:62:37:1311:2215:62,37	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr2	179474668	.	G	A	2697.17	.	AB=0.521951;ABP=3.8683;AC=1;AF=0.5;AN=2;AO=107;CIGAR=1X;DP=205;DPB=205;DPRA=0;EPP=3.51765;EPPR=3.36483;GTI=0;LEN=1;MEANALT=1;MQM=41.8131;MQMR=42;NS=1;NUMALT=1;ODDS=548.918;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3939;QR=3545;RO=98;RPL=73;RPP=33.8777;RPPR=17.989;RPR=34;RUN=1;SAF=57;SAP=4.00471;SAR=50;SF=10;SRF=55;SRP=6.20103;SRR=43;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	0/1:-279.675,0,-246.868:205:98:107:3939:3545:98,107	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr2	179476243	.	G	A	4833.89	.	AB=0.508197;ABP=3.22389;AC=1;AF=0.5;AN=2;AO=186;CIGAR=1X;DP=366;DPB=366;DPRA=0;EPP=23.6043;EPPR=13.2126;GTI=0;LEN=1;MEANALT=2;MQM=41.9032;MQMR=41.8883;NS=1;NUMALT=1;ODDS=1023.21;PAIRED=1;PAIREDR=0.994413;PAO=0;PQA=0;PQR=0;PRO=0;QA=7054;QR=6553;RO=179;RPL=124;RPP=47.8874;RPPR=37.0866;RPR=62;RUN=1;SAF=76;SAP=16.5061;SAR=110;SF=5;SRF=77;SRP=10.5923;SRR=102;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	0/1:-498.463,0,-456.672:366:179:186:7054:6553:179,186	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr2	179477267	.	T	G	936.79	.	AB=0.525641;ABP=3.45573;AC=1;AF=0.5;AN=2;AO=41;CIGAR=1X;DP=78;DPB=78;DPRA=0;EPP=4.33437;EPPR=7.76406;GTI=0;LEN=1;MEANALT=1;MQM=41.122;MQMR=42;NS=1;NUMALT=1;ODDS=194.043;PAIRED=1;PAIREDR=0.972973;PAO=0;PQA=0;PQR=0;PRO=0;QA=1478;QR=1326;RO=37;RPL=29;RPP=18.3165;RPPR=10.1116;RPR=12;RUN=1;SAF=8;SAP=36.112;SAR=33;SF=24;SRF=10;SRP=19.9713;SRR=27;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-103.658,0,-91.9416:78:37:41:1478:1326:37,41	.	.	.	.	.	.	.	.	.	.	.	.
+chr2	179477717	.	A	G	3535.22	.	AB=0.496403;ABP=3.04154;AC=1;AF=0.5;AN=2;AO=138;CIGAR=1X;DP=278;DPB=278;DPRA=0;EPP=6.09442;EPPR=3.25847;GTI=0;LEN=1;MEANALT=1;MQM=41.8406;MQMR=41.8286;NS=1;NUMALT=1;ODDS=814.016;PAIRED=0.985507;PAIREDR=0.985714;PAO=0;PQA=0;PQR=0;PRO=0;QA=5138;QR=5234;RO=140;RPL=70;RPP=3.07324;RPPR=3.07234;RPR=68;RUN=1;SAF=78;SAP=8.10854;SAR=60;SF=10;SRF=69;SRP=3.07234;SRR=71;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	0/1:-361.173,0,-368.267:278:140:138:5138:5234:140,138	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr2	179479245	.	C	T	2688.15	.	AB=0.502347;ABP=3.02049;AC=1;AF=0.5;AN=2;AO=107;CIGAR=1X;DP=213;DPB=213;DPRA=0;EPP=27.8706;EPPR=42.6704;GTI=0;LEN=1;MEANALT=1;MQM=41.6542;MQMR=42;NS=1;NUMALT=1;ODDS=609.398;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=4031;QR=3956;RO=106;RPL=30;RPP=47.84;RPPR=39.1469;RPR=77;RUN=1;SAF=65;SAP=13.7459;SAR=42;SF=10;SRF=53;SRP=3.0103;SRR=53;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	0/1:-283.593,0,-278.983:213:106:107:4031:3956:106,107	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr2	179481370	.	G	A	911.79	.	AB=0.469136;ABP=3.68051;AC=1;AF=0.5;AN=2;AO=38;CIGAR=1X;DP=81;DPB=81;DPRA=0;EPP=6.66752;EPPR=14.3727;GTI=0;LEN=1;MEANALT=1;MQM=41.9474;MQMR=41.9535;NS=1;NUMALT=1;ODDS=209.948;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1408;QR=1586;RO=43;RPL=22;RPP=5.06748;RPPR=7.10075;RPR=16;RUN=1;SAF=21;SAP=3.9246;SAR=17;SF=6;SRF=17;SRP=7.10075;SRR=26;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	0/1:-97.6209,0,-113.305:81:43:38:1408:1586:43,38	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr2	179482089	.	C	T	841.68	.	AB=0.271277;ABP=88.4369;AC=1;AF=0.5;AN=2;AO=51;CIGAR=1X;DP=188;DPB=188;DPRA=0;EPP=8.16222;EPPR=4.29416;GTI=0;LEN=1;MEANALT=1;MQM=41.9608;MQMR=42;NS=1;NUMALT=1;ODDS=193.805;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1810;QR=4983;RO=137;RPL=25;RPP=3.05288;RPPR=4.92817;RPR=26;RUN=1;SAF=18;SAP=12.5903;SAR=33;SF=21;SRF=54;SRP=16.3403;SRR=83;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-100.55,0,-375.879:188:137:51:1810:4983:137,51	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr2	179486478	.	T	C	4302.81	.	AB=0.557047;ABP=11.4339;AC=1;AF=0.5;AN=2;AO=166;CIGAR=1X;DP=298;DPB=298;DPRA=0;EPP=10.545;EPPR=10.9724;GTI=0;LEN=1;MEANALT=1;MQM=41.6506;MQMR=41.8636;NS=1;NUMALT=1;ODDS=743.291;PAIRED=1;PAIREDR=0.992424;PAO=0;PQA=0;PQR=0;PRO=0;QA=6168;QR=4892;RO=132;RPL=104;RPP=26.0855;RPPR=15.9075;RPR=62;RUN=1;SAF=79;SAP=3.84749;SAR=87;SF=25;SRF=55;SRP=10.9724;SRR=77;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-441.238,0,-333.339:298:132:166:6168:4892:132,166	.	.	.	.	.	.	.	.	.	.	.
+chr2	179497025	.	A	G	2797.78	.	AB=0.506726;ABP=3.09794;AC=1;AF=0.5;AN=2;AO=113;CIGAR=1X;DP=223;DPB=223;DPRA=0;EPP=8.56389;EPPR=5.9056;GTI=0;LEN=1;MEANALT=3;MQM=41.9115;MQMR=41.8241;NS=1;NUMALT=1;ODDS=629.688;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=4078;QR=4033;RO=108;RPL=57;RPP=3.02952;RPPR=5.9056;RPR=56;RUN=1;SAF=68;SAP=13.1759;SAR=45;SF=10;SRF=60;SRP=5.9056;SRR=48;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	0/1:-288.019,0,-280.975:223:108:113:4078:4033:108,113	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr2	179497133	.	C	T	2154.19	.	AB=0.5;ABP=3.0103;AC=1;AF=0.5;AN=2;AO=89;CIGAR=1X;DP=178;DPB=178;DPRA=0;EPP=7.13366;EPPR=7.84676;GTI=0;LEN=1;MEANALT=2;MQM=41.5843;MQMR=42;NS=1;NUMALT=1;ODDS=496.021;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3269;QR=3217;RO=88;RPL=57;RPP=18.2594;RPPR=6.56362;RPR=32;RUN=1;SAF=65;SAP=44.0243;SAR=24;SF=5;SRF=57;SRP=19.6912;SRR=31;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	0/1:-228.011,0,-225.609:178:88:89:3269:3217:88,89	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr2	179498042	.	T	C	1045.60	.	AB=0.412281;ABP=10.6295;AC=1;AF=0.5;AN=2;AO=47;CIGAR=1X;DP=114;DPB=114;DPRA=0;EPP=3.42611;EPPR=3.82055;GTI=0;LEN=1;MEANALT=1;MQM=41.1489;MQMR=41.9701;NS=1;NUMALT=1;ODDS=240.757;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1695;QR=2552;RO=67;RPL=16;RPP=13.4056;RPPR=14.7103;RPR=31;RUN=1;SAF=20;SAP=5.27418;SAR=27;SF=9;SRF=35;SRP=3.30199;SRR=32;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	0/1:-112.554,0,-186.145:114:67:47:1695:2552:67,47	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr2	179505367	.	AAGATTA	AA	361.49	.	AB=0.486486;ABP=3.06899;AC=1;AF=0.5;AN=2;AO=18;CIGAR=1M5D1M;DP=37;DPB=24.1429;DPRA=0;EPP=3.0103;EPPR=4.03889;GTI=0;LEN=5;MEANALT=1;MQM=39.6667;MQMR=42;NS=1;NUMALT=1;ODDS=83.235;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=613;QR=703;RO=19;RPL=9;RPP=3.0103;RPPR=8.61041;RPR=9;RUN=1;SAF=10;SAP=3.49285;SAR=8;SF=24;SRF=11;SRP=4.03889;SRR=8;TYPE=del	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-40.326,0,-50.2572:37:19:18:613:703:19,18	.	.	.	.	.	.	.	.	.	.	.	.
+chr2	179515483	.	G	C	107.69	.	AB=0.428571;ABP=3.94093;AC=1;AF=0.5;AN=2;AO=9;CIGAR=1X;DP=21;DPB=21;DPRA=0;EPP=3.25157;EPPR=3.73412;GTI=0;LEN=1;MEANALT=1;MQM=33.3333;MQMR=42;NS=1;NUMALT=1;ODDS=24.7954;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=285;QR=452;RO=12;RPL=3;RPP=5.18177;RPPR=3.73412;RPR=6;RUN=1;SAF=4;SAP=3.25157;SAR=5;SF=10;SRF=6;SRP=3.0103;SRR=6;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	0/1:-15.6247,0,-33.2246:21:12:9:285:452:12,9	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr2	179516580	.	G	C	4084.52	.	AB=0.545161;ABP=8.50202;AC=1;AF=0.5;AN=2;AO=169;CIGAR=1X;DP=310;DPB=310;DPRA=0;EPP=11.0409;EPPR=3.76493;GTI=0;LEN=1;MEANALT=1;MQM=40.5266;MQMR=40;NS=1;NUMALT=1;ODDS=747.396;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=6101;QR=5170;RO=141;RPL=89;RPP=4.05106;RPPR=3.1489;RPR=80;RUN=1;SAF=52;SAP=57.2971;SAR=117;SF=25;SRF=47;SRP=37.03;SRR=94;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-422.424,0,-335.534:310:141:169:6101:5170:141,169	.	.	.	.	.	.	.	.	.	.	.
+chr2	179516680	.	C	G	1203.95	.	AB=0.478992;ABP=3.46649;AC=1;AF=0.5;AN=2;AO=57;CIGAR=1X;DP=119;DPB=119;DPRA=0;EPP=3.35316;EPPR=6.51267;GTI=0;LEN=1;MEANALT=1;MQM=37.7719;MQMR=37.9516;NS=1;NUMALT=1;ODDS=277.22;PAIRED=1;PAIREDR=0.983871;PAO=0;PQA=0;PQR=0;PRO=0;QA=2075;QR=2294;RO=62;RPL=38;RPP=16.763;RPPR=43.4978;RPR=19;RUN=1;SAF=27;SAP=3.35316;SAR=30;SF=9;SRF=36;SRP=6.51267;SRR=26;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	0/1:-127.955,0,-149.224:119:62:57:2075:2294:62,57	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr2	179517019	.	A	T	947.43	.	AB=0.515432;ABP=3.68051;AC=1;AF=0.5;AN=2;AO=167;CIGAR=1X;DP=324;DPB=324;DPRA=0;EPP=7.70432;EPPR=3.23591;GTI=0;LEN=1;MEANALT=3;MQM=13.5569;MQMR=23.3961;NS=1;NUMALT=1;ODDS=218.155;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=6195;QR=5659;RO=154;RPL=62;RPP=27.0525;RPPR=17.4492;RPR=105;RUN=1;SAF=97;SAP=12.4894;SAR=70;SF=25;SRF=88;SRP=9.83493;SRR=66;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-105.67,0,-216.162:324:154:167:6195:5659:154,167	.	.	.	.	.	.	.	.	.	.	.
+chr2	179517223	.	G	A	698.10	.	AB=0.5;ABP=3.0103;AC=1;AF=0.5;AN=2;AO=66;CIGAR=1X;DP=132;DPB=132;DPRA=0;EPP=3.53672;EPPR=4.19474;GTI=0;LEN=1;MEANALT=1;MQM=20.2879;MQMR=29.7879;NS=1;NUMALT=1;ODDS=160.743;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2369;QR=2388;RO=66;RPL=29;RPP=5.11597;RPPR=13.6703;RPR=37;RUN=1;SAF=38;SAP=6.30041;SAR=28;SF=9;SRF=34;SRP=3.1419;SRR=32;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	0/1:-76.5827,0,-126.566:132:66:66:2369:2388:66,66	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr2	179519303	.	T	C	71.00	.	AB=0;ABP=0;AC=0;AF=0;AN=2;AO=8;CIGAR=1X;DP=40;DPB=40;DPRA=0;EPP=4.09604;EPPR=4.09604;GTI=0;LEN=1;MEANALT=1;MQM=5.375;MQMR=1.78125;NS=1;NUMALT=1;ODDS=16.3491;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=302;QR=1185;RO=32;RPL=5;RPP=4.09604;RPPR=64.083;RPR=3;RUN=1;SAF=4;SAP=3.0103;SAR=4;SF=12;SRF=19;SRP=5.45321;SRR=13;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	.	.	0/0:0,-8.11889,-1.19592:40:32:8:302:1185:32,8	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr2	179527399	.	T	A	28.95	.	AB=0;ABP=0;AC=0;AF=0;AN=2;AO=2;CIGAR=1X;DP=9;DPB=9;DPRA=0;EPP=3.0103;EPPR=18.2106;GTI=0;LEN=1;MEANALT=1;MQM=6.5;MQMR=5.28571;NS=1;NUMALT=1;ODDS=6.66367;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=31;QR=267;RO=7;RPL=1;RPP=3.0103;RPPR=18.2106;RPR=1;RUN=1;SAF=2;SAP=7.35324;SAR=0;SF=24;SRF=7;SRP=18.2106;SRR=0;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/0:0,-1.55105,-2.22352:9:7:2:31:267:7,2	.	.	.	.	.	.	.	.	.	.	.	.
+chr2	179528038	.	A	C	709.24	.	AB=0;ABP=0;AC=2;AF=1;AN=2;AO=51;CIGAR=1X;DP=51;DPB=51;DPRA=0;EPP=10.206;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=19.1961;MQMR=0;NS=1;NUMALT=1;ODDS=75.3062;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1783;QR=0;RO=0;RPL=16;RPP=18.3809;RPPR=0;RPR=35;RUN=1;SAF=42;SAP=49.3776;SAR=9;SF=12;SRF=0;SRP=0;SRR=0;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	.	.	1/1:-80.9576,-15.3525,0:51:0:51:1783:0:0,51	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr2	179528068	.	C	A	81.86	.	AB=0.470588;ABP=3.90444;AC=1;AF=0.5;AN=2;AO=56;CIGAR=1X;DP=119;DPB=119;DPRA=0;EPP=10.6105;EPPR=3.872;GTI=0;LEN=1;MEANALT=1;MQM=10.4643;MQMR=12.0635;NS=1;NUMALT=1;ODDS=18.8496;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2102;QR=2277;RO=63;RPL=31;RPP=4.40625;RPPR=3.32051;RPR=25;RUN=1;SAF=32;SAP=5.49198;SAR=24;SF=10;SRF=36;SRP=5.80219;SRR=27;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	0/1:-15.4703,0,-30.4326:119:63:56:2102:2277:63,56	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr2	179539903	.	C	A	1221.93	.	AB=0.544118;ABP=4.1599;AC=6;AF=0.5;AN=10;AO=37;CIGAR=1X;DP=360;DPB=68;DPRA=0;EPP=3.06899;EPPR=3.64073;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=41.4194;NS=1;NUMALT=1;ODDS=161.921;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1396;QR=1170;RO=31;RPL=33;RPP=52.3673;RPPR=40.0654;RPR=4;RUN=1;SAF=14;SAP=7.76406;SAR=23;SF=5,9,12,20,25;SRF=13;SRP=4.76149;SRR=18;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	0/1:-100.324,0,-80.2109:68:31:37:1396:1170:31,37	.	.	.	0/1:-51.2782,0,-21.8877:28:10:18:687:344:10,18	.	.	1/1:-244.443,-22.2762,0:74:0:74:2828:0:0,74	.	.	.	.	.	.	.	0/1:-136.134,0,-79.6061:80:32:48:1858:1194:32,48	.	.	.	.	0/1:-131.498,0,-158.442:110:60:50:1901:2207:60,50	.	.	.	.	.	.	.	.	.	.	.
+chr2	179541899	.	C	G	54.47	.	AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X;DP=3;DPB=3;DPRA=0;EPP=3.0103;EPPR=0;GTI=0;LEN=1;MEANALT=2;MQM=42;MQMR=0;NS=1;NUMALT=1;ODDS=7.37776;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=75;QR=0;RO=0;RPL=1;RPP=3.0103;RPPR=0;RPR=1;RUN=1;SAF=2;SAP=7.35324;SAR=0;SF=25;SRF=0;SRP=0;SRR=0;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	1/1:-6.6513,-0.60206,0:3:0:2:75:0:0,2	.	.	.	.	.	.	.	.	.	.	.
+chr2	179543217	.	C	T	1832.62	.	AB=0.560606;ABP=5.11597;AC=6;AF=0.5;AN=10;AO=37;CIGAR=1X;DP=519;DPB=66;DPRA=0;EPP=7.76406;EPPR=10.7656;GTI=0;LEN=1;MEANALT=2;MQM=41.9459;MQMR=42;NS=1;NUMALT=1;ODDS=150.164;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1409;QR=1057;RO=28;RPL=22;RPP=5.88603;RPPR=5.80219;RPR=15;RUN=1;SAF=22;SAP=5.88603;SAR=15;SF=5,9,12,20,25;SRF=14;SRP=3.0103;SRR=14;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	0/1:-102.205,0,-72.0009:66:28:37:1409:1057:28,37	.	.	.	0/1:-93.7281,0,-80.6857:67:32:35:1310:1154:32,35	.	.	1/1:-376.055,-34.9195,0:116:0:116:4355:0:0,116	.	.	.	.	.	.	.	0/1:-147.158,0,-102.585:97:42:55:2056:1532:42,55	.	.	.	.	0/1:-233.725,0,-196.561:173:81:92:3322:2862:81,92	.	.	.	.	.	.	.	.	.	.	.
+chr2	179544685	.	CTCTTCTTCTTCTTCTA	CTCTTCTTCTTCTTCTTCTA	1469.54	.	AB=0.542857;ABP=4.68544;AC=1;AF=0.5;AN=2;AO=57;CIGAR=1M3I16M;DP=105;DPB=115.412;DPRA=0;EPP=3.0484;EPPR=4.27278;GTI=0;LEN=3;MEANALT=6;MQM=41.9298;MQMR=42;NS=1;NUMALT=1;ODDS=238.89;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2116;QR=1605;RO=43;RPL=27;RPP=3.35316;RPPR=3.0608;RPR=30;RUN=1;SAF=36;SAP=11.5819;SAR=21;SF=24;SRF=24;SRP=4.27278;SRR=19;TYPE=ins	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-153.345,0,-109.32:105:43:57:2116:1605:43,57	.	.	.	.	.	.	.	.	.	.	.	.
+chr2	179545859	.	C	T	1509.63	.	AB=0;ABP=0;AC=8;AF=1;AN=14;AO=83;CIGAR=1X;DP=699;DPB=83;DPRA=0;EPP=4.29225;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=41.9759;MQMR=0;NS=1;NUMALT=1;ODDS=119.668;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=3076;QR=0;RO=0;RPL=35;RPP=7.43173;RPPR=0;RPR=48;RUN=1;SAF=41;SAP=3.03646;SAR=42;SF=3,5,6,10,24,25,27;SRF=0;SRP=0;SRR=0;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	1/1:-265.838,-24.9855,0:83:0:83:3076:0:0,83	.	0/1:-152.158,0,-102.306:98:43:55:2119:1531:43,55	0/1:-73.0701,0,-85.3643:60:32:28:1049:1193:32,28	.	.	.	0/1:-94.8156,0,-79.9445:66:30:36:1322:1154:30,36	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-94.9426,0,-72.6347:65:29:35:1321:1061:29,35	0/1:-234.829,0,-219.85:176:85:89:3346:3161:85,89	.	0/1:-185.097,0,-196.217:151:78:72:2691:2808:78,72	.	.	.	.	.	.	.	.	.
+chr2	179547455	.	T	C	4654.99	.	AB=0.526882;ABP=5.34522;AC=1;AF=0.5;AN=2;AO=196;CIGAR=1X;DP=372;DPB=372;DPRA=0;EPP=20.7366;EPPR=7.94546;GTI=0;LEN=1;MEANALT=1;MQM=41.8418;MQMR=41.8466;NS=1;NUMALT=1;ODDS=992.357;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=6867;QR=6452;RO=176;RPL=54;RPP=88.8056;RPPR=60.0608;RPR=142;RUN=1;SAF=122;SAP=28.5362;SAR=74;SF=27;SRF=110;SRP=26.8965;SRR=66;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-485.133,0,-446.066:372:176:196:6867:6452:176,196	.	.	.	.	.	.	.	.	.
+chr2	179548694	.	GATTTTTTTTTTTTTTTTAAGAG	GATTTTTTTTTTTTTTTAAGAG	257.32	.	AB=0.342857;ABP=10.5174;AC=1;AF=0.5;AN=2;AO=12;CIGAR=2M1D20M;DP=35;DPB=33.9565;DPRA=0;EPP=9.52472;EPPR=6.48466;GTI=0;LEN=1;MEANALT=9;MQM=42;MQMR=42;NS=1;NUMALT=1;ODDS=45.0085;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=424;QR=352;RO=10;RPL=5;RPP=3.73412;RPPR=3.0103;RPR=7;RUN=1;SAF=8;SAP=5.9056;SAR=4;SF=24;SRF=8;SRP=10.8276;SRR=2;TYPE=del	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-30.4909,0,-24.3018:35:10:12:424:352:10,12	.	.	.	.	.	.	.	.	.	.	.	.
+chr2	179548695	.	ATTTTTTTTTTTTTTTTAAGAG	ATTTTTTTTTTTTTTTAAGAG,ATTTTTTTTTTTTTTTTTAAGAG	275.27	.	AB=0.257143;ABP=38.8706;AC=10,1;AF=0.5;AN=22;AO=18;CIGAR=1M1D20M;DP=1028;DPB=69.5455;DPRA=0;EPP=7.35324;EPPR=10.9724;GTI=0;LEN=1;MEANALT=12;MQM=41.8889;MQMR=41.5152;NS=1;NUMALT=1;ODDS=71.5871;PAIRED=1;PAIREDR=0.909091;PAO=0.25;PQA=9.5;PQR=9.5;PRO=0.25;QA=627;QR=1146;RO=33;RPL=6;RPP=7.35324;RPPR=14.1309;RPR=12;RUN=1;SAF=10;SAP=3.49285;SAR=8;SF=3,5,6,9,10,12,16,20,21,25,27;SRF=21;SRP=8.34028;SRR=12;TYPE=del	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	0/1:-38.074,0,-83.9269,.,.,.:70:33:18,.:627,.:1146:33,18	.	0/1:-21.2259,0,-114.282,.,.,.:78:43:14,.:454,.:1523:43,14	0/1:-17.8242,0,-62.2334,.,.,.:46:24:11,.:322,.:827:24,11	.	.	0/2:-22.7589,.,.,0,.,-62.5873:60:24:.,13:.,385:840:24,13	0/1:-29.541,0,-115.709,.,.,.:75:43:18,.:560,.:1535:43,18	.	0/1:-40.5268,0,-176.582,.,.,.:105:65:23,.:766,.:2332:65,23	.	.	.	0/1:-36.6258,0,-102.434,.,.,.:91:42:23,.:661,.:1479:42,23	.	.	.	0/1:-27.0131,0,-176.725,.,.,.:102:66:20,.:614,.:2349:66,20	0/1:-33.7927,0,-84.218,.,.,.:74:33:17,.:557,.:1147:33,17	.	.	.	0/1:-63.5339,0,-208.836,.,.,.:173:79:39,.:1144,.:2811:79,39	.	0/1:-79.7511,0,-210.282,.,.,.:154:81:42,.:1342,.:2867:81,42	.	.	.	.	.	.	.	.	.
+chr2	179549048	.	C	T	2427.91	.	AB=0.502058;ABP=3.01924;AC=1;AF=0.5;AN=2;AO=122;CIGAR=1X;DP=243;DPB=243;DPRA=0;EPP=105.817;EPPR=86.6844;GTI=0;LEN=1;MEANALT=2;MQM=41.9672;MQMR=41.8333;NS=1;NUMALT=1;ODDS=559.047;PAIRED=0.991803;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=4181;QR=4281;RO=120;RPL=10;RPP=188.191;RPPR=176.8;RPR=112;RUN=1;SAF=97;SAP=95.2801;SAR=25;SF=25;SRF=101;SRP=124.685;SRR=19;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-291.69,0,-299.107:243:120:122:4181:4281:120,122	.	.	.	.	.	.	.	.	.	.	.
+chr2	179554002	.	A	C	1843.09	.	AB=0.547445;ABP=5.68898;AC=1;AF=0.5;AN=2;AO=75;CIGAR=1X;DP=137;DPB=137;DPRA=0;EPP=5.35549;EPPR=5.25182;GTI=0;LEN=1;MEANALT=1;MQM=41.24;MQMR=41.371;NS=1;NUMALT=1;ODDS=344.609;PAIRED=0.986667;PAIREDR=0.983871;PAO=0;PQA=0;PQR=0;PRO=0;QA=2709;QR=2320;RO=62;RPL=36;RPP=3.27088;RPPR=3.57068;RPR=39;RUN=1;SAF=48;SAP=15.7786;SAR=27;SF=9;SRF=38;SRP=9.87495;SRR=24;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	0/1:-192.388,0,-157.041:137:62:75:2709:2320:62,75	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr2	179554305	.	C	T	2528.88	.	AB=0;ABP=0;AC=8;AF=1;AN=14;AO=133;CIGAR=1X;DP=1232;DPB=134;DPRA=0;EPP=5.76954;EPPR=5.18177;GTI=0;LEN=1;MEANALT=1;MQM=41.5865;MQMR=24;NS=1;NUMALT=1;ODDS=184.418;PAIRED=0.992481;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=4866;QR=14;RO=1;RPL=79;RPP=13.2146;RPPR=5.18177;RPR=54;RUN=1;SAF=70;SAP=3.81032;SAR=63;SF=3,5,6,10,24,25,27;SRF=0;SRP=5.18177;SRR=1;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	1/1:-416.796,-38.9778,0:134:1:133:4866:14:1,133	.	0/1:-286.251,0,-152.075:168:63:105:3952:2356:63,105	0/1:-120.169,0,-199.145:122:72:50:1809:2727:72,50	.	.	.	0/1:-144.509,0,-155.516:119:62:57:2078:2230:62,57	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-121.205,0,-141.645:101:54:47:1750:1986:54,47	0/1:-394.627,0,-401.054:307:154:153:5636:5709:154,153	.	0/1:-337.457,0,-379.16:281:148:132:4888:5361:148,132	.	.	.	.	.	.	.	.	.
+chr2	179558366	.	T	C	3222.72	.	AB=0.518987;ABP=3.50507;AC=6;AF=0.5;AN=10;AO=82;CIGAR=1X;DP=907;DPB=158;DPRA=0;EPP=11.5903;EPPR=8.61041;GTI=0;LEN=1;MEANALT=1;MQM=41.7073;MQMR=41.75;NS=1;NUMALT=1;ODDS=442.065;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3004;QR=2889;RO=76;RPL=43;RPP=3.434;RPPR=3.12459;RPR=39;RUN=1;SAF=55;SAP=23.7717;SAR=27;SF=5,9,12,20,25;SRF=52;SRP=25.4108;SRR=24;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	0/1:-212.864,0,-201.183:158:76:82:3004:2889:76,82	.	.	.	0/1:-163.306,0,-110.94:104:43:61:2244:1643:43,61	.	.	1/1:-672.723,-62.6142,0:208:0:208:7773:0:0,208	.	.	.	.	.	.	.	0/1:-289.405,0,-161.983:175:69:106:3951:2481:69,106	.	.	.	.	0/1:-332.444,0,-345.15:262:134:128:4747:4899:134,128	.	.	.	.	.	.	.	.	.	.	.
+chr2	179563643	.	TAAAAAAAAAAAAAAAGAAAAAAAAAGAAAAAATATTTCTG	TAAAAAAAAAAAAAAGAAAAAAAAAGAAAAAATATTTCTG	328.58	.	AB=0.269231;ABP=39.0901;AC=1;AF=0.5;AN=2;AO=21;CIGAR=1M1D39M;DP=78;DPB=76.6829;DPRA=0;EPP=15.5221;EPPR=21.1059;GTI=0;LEN=1;MEANALT=30;MQM=41.9048;MQMR=40.1667;NS=1;NUMALT=1;ODDS=16.7177;PAIRED=1;PAIREDR=0.916667;PAO=2;PQA=36.25;PQR=36.25;PRO=2;QA=680;QR=412;RO=12;RPL=9;RPP=3.94093;RPPR=5.9056;RPR=12;RUN=1;SAF=10;SAP=3.1137;SAR=11;SF=12;SRF=3;SRP=9.52472;SRR=9;TYPE=del	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-39.8826,0,-15.3653:78:12:21:680:412:12,21	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr2	179567398	.	A	C	2342.85	.	AB=0.614379;ABP=20.3963;AC=1;AF=0.5;AN=2;AO=94;CIGAR=1X;DP=153;DPB=153;DPRA=0;EPP=3.1027;EPPR=3.0471;GTI=0;LEN=1;MEANALT=1;MQM=41.9574;MQMR=41.678;NS=1;NUMALT=1;ODDS=301.689;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3460;QR=2218;RO=59;RPL=78;RPP=91.8097;RPPR=33.963;RPR=16;RUN=1;SAF=32;SAP=23.801;SAR=62;SF=10;SRF=15;SRP=33.963;SRR=44;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	0/1:-254.127,0,-145.264:153:59:94:3460:2218:59,94	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr2	179571423	.	G	T	2081.41	.	AB=0.548387;ABP=6.16244;AC=1;AF=0.5;AN=2;AO=85;CIGAR=1X;DP=155;DPB=155;DPRA=0;EPP=3.64897;EPPR=7.47733;GTI=0;LEN=1;MEANALT=1;MQM=41.6;MQMR=41.9714;NS=1;NUMALT=1;ODDS=375.121;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3093;QR=2514;RO=70;RPL=62;RPP=41.8669;RPPR=20.8784;RPR=23;RUN=1;SAF=36;SAP=7.3277;SAR=49;SF=0;SRF=32;SRP=4.12706;SRR=38;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	0/1:-219.316,0,-171.836:155:70:85:3093:2514:70,85	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr2	179575511	.	C	T	9374.60	.	AB=0.495238;ABP=3.15506;AC=1;AF=0.5;AN=2;AO=364;CIGAR=1X;DP=735;DPB=735;DPRA=0;EPP=53.503;EPPR=41.6201;GTI=0;LEN=1;MEANALT=3;MQM=41.7802;MQMR=41.8103;NS=1;NUMALT=1;ODDS=2158.58;PAIRED=0.991758;PAIREDR=0.99458;PAO=0;PQA=0;PQR=0;PRO=0;QA=13616;QR=13807;RO=369;RPL=207;RPP=17.9243;RPPR=56.1202;RPR=157;RUN=1;SAF=191;SAP=4.94315;SAR=173;SF=12;SRF=190;SRP=3.72235;SRR=179;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-951.91,0,-968.211:735:369:364:13616:13807:369,364	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr2	179578108	.	TACAAAACAAAACAAAACAAAACAAAACAAAAAAAACAAAGGACAACAAT	TACAAAACAAAACAAAACAAAACAAAACAAAACAAAAAAAACAAAGGACAACAAT,AACAAAACAAAACAAAACAAAACAAAACAAAAAAAACAAAGGACAACAAT	2107.04	.	AB=0.420455;ABP=7.84676;AC=3,1;AF=0.5;AN=6;AO=37;CIGAR=1M5I49M;DP=324;DPB=94.24;DPRA=0;EPP=5.88603;EPPR=11.961;GTI=0;LEN=5;MEANALT=7;MQM=41.3514;MQMR=42;NS=1;NUMALT=1;ODDS=216.662;PAIRED=1;PAIREDR=0.97561;PAO=13.5;PQA=446.5;PQR=39.5;PRO=1.5;QA=1303;QR=1518;RO=41;RPL=19;RPP=3.06899;RPPR=7.30028;RPR=18;RUN=1;SAF=6;SAP=39.6906;SAR=31;SF=5,12,20;SRF=11;SRP=22.1298;SRR=30;TYPE=ins	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	0/1:-118.609,0,-103.151,.,.,.:88:41:37,.:1303,.:1518:41,37	.	.	.	.	.	.	1/2:-442.269,-83.0788,-37.6233,-363.491,0,-348.91:125:0:102,15:3476,580:0:0,102,15	.	.	.	.	.	.	.	0/1:-140.278,0,-142.327,.,.,.:111:54:45,.:1637,.:2017:54,45	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr2	179578730	.	G	A	10413.88	.	AB=0.551363;ABP=13.9405;AC=4;AF=0.5;AN=6;AO=263;CIGAR=1X;DP=1594;DPB=477;DPRA=0;EPP=26.2029;EPPR=20.9097;GTI=0;LEN=1;MEANALT=1;MQM=41.9696;MQMR=41.9112;NS=1;NUMALT=1;ODDS=1202.88;PAIRED=0.980989;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=10003;QR=7901;RO=214;RPL=61;RPP=167.159;RPPR=88.8951;RPR=202;RUN=1;SAF=132;SAP=3.01856;SAR=131;SF=5,12,20;SRF=115;SRP=5.60795;SRR=99;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	0/1:-719.42,0,-541.609:477:214:263:10003:7901:214,263	.	.	.	.	.	.	1/1:-1731.32,-159.617,0:536:1:534:20071:17:1,534	.	.	.	.	.	.	.	0/1:-783.011,0,-726.783:581:285:296:11092:10428:285,296	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr2	179579093	.	T	C	9096.93	.	AB=0.474886;ABP=5.40983;AC=4;AF=0.5;AN=6;AO=208;CIGAR=1X;DP=1366;DPB=438;DPRA=0;EPP=4.51363;EPPR=39.3022;GTI=0;LEN=1;MEANALT=1;MQM=41.8942;MQMR=41.9913;NS=1;NUMALT=1;ODDS=1227.19;PAIRED=0.990385;PAIREDR=0.995652;PAO=0;PQA=0;PQR=0;PRO=0;QA=7780;QR=8619;RO=230;RPL=102;RPP=3.17734;RPPR=34.7704;RPR=106;RUN=1;SAF=110;SAP=4.51363;SAR=98;SF=5,12,20;SRF=124;SRP=6.06924;SRR=106;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	0/1:-540.709,0,-613.354:438:230:208:7780:8619:230,208	.	.	.	.	.	.	1/1:-1574.99,-139.328,0:496:3:493:18395:111:3,493	.	.	.	.	.	.	.	0/1:-637.667,0,-503.763:432:196:235:8900:7342:196,235	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr2	179579212	.	T	C	5537.72	.	AB=0.45977;ABP=6.67934;AC=4;AF=0.5;AN=6;AO=120;CIGAR=1X;DP=866;DPB=261;DPRA=0;EPP=7.64277;EPPR=31.4858;GTI=0;LEN=1;MEANALT=1;MQM=41.65;MQMR=41.8723;NS=1;NUMALT=1;ODDS=671.094;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=4404;QR=5277;RO=141;RPL=79;RPP=29.1404;RPPR=89.6382;RPR=41;RUN=1;SAF=59;SAP=3.08268;SAR=61;SF=5,12,20;SRF=48;SRP=34.1963;SRR=93;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	0/1:-301.644,0,-377.521:261:141:120:4404:5277:141,120	.	.	.	.	.	.	1/1:-1001.27,-94.0773,0:318:1:316:11603:15:1,316	.	.	.	.	.	.	.	0/1:-430.79,0,-311.068:287:123:163:5985:4602:123,163	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr2	179579786	.	G	A	6009.19	.	AB=0.462998;ABP=9.27749;AC=1;AF=0.5;AN=2;AO=244;CIGAR=1X;DP=527;DPB=527;DPRA=0;EPP=28.9612;EPPR=15.9087;GTI=0;LEN=1;MEANALT=1;MQM=41.627;MQMR=41.8657;NS=1;NUMALT=1;ODDS=1383.67;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=8952;QR=10440;RO=283;RPL=133;RPP=7.31765;RPPR=15.9087;RPR=111;RUN=1;SAF=142;SAP=17.2495;SAR=102;SF=25;SRF=158;SRP=11.3662;SRR=125;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-613.341,0,-741.25:527:283:244:8952:10440:283,244	.	.	.	.	.	.	.	.	.	.	.
+chr2	179579822	.	T	A	8806.88	.	AB=0.581047;ABP=25.8893;AC=4;AF=0.5;AN=6;AO=233;CIGAR=1X;DP=1329;DPB=401;DPRA=0;EPP=37.6886;EPPR=3.12874;GTI=0;LEN=1;MEANALT=2;MQM=41.6223;MQMR=41.8909;NS=1;NUMALT=1;ODDS=928.263;PAIRED=0.991416;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=8783;QR=6173;RO=165;RPL=104;RPP=8.83507;RPPR=5.9714;RPR=129;RUN=1;SAF=116;SAP=3.01962;SAR=117;SF=5,12,20;SRF=82;SRP=3.02346;SRR=83;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	0/1:-633.144,0,-412.997:401:165:233:8783:6173:165,233	.	.	.	.	.	.	1/1:-1524.4,-142.086,0:474:0:472:17667:0:0,472	.	.	.	.	.	.	.	0/1:-518.442,0,-685.029:454:250:203:7605:9522:250,203	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr2	179582327	.	C	T	9451.29	.	AB=0.473002;ABP=5.94155;AC=4;AF=0.5;AN=6;AO=219;CIGAR=1X;DP=1518;DPB=463;DPRA=0;EPP=15.1567;EPPR=15.2438;GTI=0;LEN=1;MEANALT=2;MQM=41.9817;MQMR=41.9918;NS=1;NUMALT=1;ODDS=1211.74;PAIRED=0.990868;PAIREDR=0.995885;PAO=0;PQA=0;PQR=0;PRO=0;QA=7917;QR=8789;RO=243;RPL=62;RPP=92.4968;RPPR=101.531;RPR=157;RUN=1;SAF=141;SAP=42.3645;SAR=78;SF=5,12,20;SRF=159;SRP=53.2759;SRR=84;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	0/1:-548.152,0,-623.992:463:243:219:7917:8789:243,219	.	.	.	.	.	.	1/1:-1770.73,-165.874,0:556:1:555:20445:15:1,555	.	.	.	.	.	.	.	0/1:-613.496,0,-664.519:499:260:239:8837:9384:260,239	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr2	179582537	.	G	T	3741.14	.	AB=0.523316;ABP=3.92164;AC=4;AF=0.5;AN=6;AO=101;CIGAR=1X;DP=600;DPB=193;DPRA=0;EPP=3.0318;EPPR=3.86001;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=42;NS=1;NUMALT=1;ODDS=523.156;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3740;QR=3422;RO=92;RPL=68;RPP=29.3475;RPPR=30.2953;RPR=33;RUN=1;SAF=32;SAP=32.4434;SAR=69;SF=5,12,20;SRF=30;SRP=27.1797;SRR=62;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	0/1:-266.169,0,-239.066:193:92:101:3740:3422:92,101	.	.	.	.	.	.	1/1:-651.709,-62.9153,0:210:0:209:7495:0:0,209	.	.	.	.	.	.	.	0/1:-257.508,0,-229.39:197:92:103:3678:3318:92,103	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr2	179583317	.	G	A	1520.02	.	AB=0.476923;ABP=3.61163;AC=1;AF=0.5;AN=2;AO=62;CIGAR=1X;DP=130;DPB=130;DPRA=0;EPP=4.27115;EPPR=6.93191;GTI=0;LEN=1;MEANALT=2;MQM=41.4194;MQMR=42;NS=1;NUMALT=1;ODDS=349.997;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2288;QR=2554;RO=67;RPL=29;RPP=3.57068;RPPR=3.82055;RPR=33;RUN=1;SAF=31;SAP=3.0103;SAR=31;SF=9;SRF=42;SRP=12.3768;SRR=25;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	0/1:-158.365,0,-181.678:130:67:62:2288:2554:67,62	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr2	179583496	.	T	G	9224.37	.	AB=0.462121;ABP=7.94546;AC=4;AF=0.5;AN=6;AO=183;CIGAR=1X;DP=1374;DPB=396;DPRA=0;EPP=3.97144;EPPR=7.10742;GTI=0;LEN=1;MEANALT=2;MQM=41.7814;MQMR=41.8962;NS=1;NUMALT=1;ODDS=1060.28;PAIRED=1;PAIREDR=0.985849;PAO=0;PQA=0;PQR=0;PRO=0;QA=6848;QR=8002;RO=212;RPL=62;RPP=44.3157;RPPR=53.2;RPR=121;RUN=1;SAF=92;SAP=3.02217;SAR=91;SF=5,12,20;SRF=103;SRP=3.37904;SRR=109;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	0/1:-472.3,0,-570.476:396:212:183:6848:8002:212,183	.	.	.	.	.	.	1/1:-1789.68,-167.674,0:558:0:557:20778:0:0,557	.	.	.	.	.	.	.	0/1:-546.008,0,-550.96:420:211:209:7852:7842:211,209	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr2	179585257	.	G	C	2234.25	.	AB=0.542683;ABP=5.60547;AC=1;AF=0.5;AN=2;AO=89;CIGAR=1X;DP=164;DPB=164;DPRA=0;EPP=44.0243;EPPR=15.7786;GTI=0;LEN=1;MEANALT=1;MQM=41.9775;MQMR=41.92;NS=1;NUMALT=1;ODDS=430.927;PAIRED=1;PAIREDR=0.986667;PAO=0;PQA=0;PQR=0;PRO=0;QA=3311;QR=2862;RO=75;RPL=60;RPP=26.4573;RPPR=21.1059;RPR=29;RUN=1;SAF=40;SAP=4.98658;SAR=49;SF=10;SRF=29;SRP=11.3777;SRR=46;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	0/1:-236.883,0,-197.653:164:75:89:3311:2862:75,89	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr2	179585266	.	C	T	5502.11	.	AB=0;ABP=0;AC=26;AF=1;AN=26;AO=165;CIGAR=1X;DP=2255;DPB=165;DPRA=0;EPP=37.2406;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=41.8848;MQMR=0;NS=1;NUMALT=1;ODDS=233.344;PAIRED=0.993939;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=6271;QR=0;RO=0;RPL=101;RPP=21.0269;RPPR=0;RPR=64;RUN=1;SAF=70;SAP=11.2356;SAR=95;SF=0,3,5,6,9,10,12,16,20,21,24,25,27;SRF=0;SRP=0;SRR=0;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	1/1:-540.431,-49.67,0:165:0:165:6271:0:0,165	.	.	1/1:-512.13,-46.6597,0:155:0:155:5936:0:0,155	.	1/1:-514.788,-47.8638,0:159:0:159:5964:0:0,159	1/1:-361.755,-33.7154,0:112:0:112:4187:0:0,112	.	.	1/1:-383.549,-35.2205,0:117:0:117:4457:0:0,117	1/1:-495.049,-46.0576,0:153:0:153:5732:0:0,153	.	1/1:-739.227,-67.7318,0:226:0:225:8563:0:0,225	.	.	.	1/1:-564.636,-52.0782,0:173:0:173:6546:0:0,173	.	.	.	1/1:-597.745,-55.6906,0:185:0:185:6953:0:0,185	1/1:-422.888,-40.338,0:135:0:134:4898:0:0,134	.	.	1/1:-300.972,-27.6948,0:92:0:92:3500:0:0,92	1/1:-937.885,-86.552,0:293:1:291:10887:15:1,291	.	1/1:-935.697,-85.7995,0:290:1:289:10862:15:1,289	.	.	.	.	.	.	.	.	.
+chr2	179585393	.	A	G	1512.43	.	AB=0.666667;ABP=14.5915;AC=4;AF=0.5;AN=6;AO=32;CIGAR=1X;DP=199;DPB=48;DPRA=0;EPP=3.28173;EPPR=7.89611;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=42;NS=1;NUMALT=1;ODDS=64.415;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1167;QR=570;RO=16;RPL=14;RPP=4.09604;RPPR=3.0103;RPR=18;RUN=1;SAF=9;SAP=16.3106;SAR=23;SF=5,12,20;SRF=5;SRP=7.89611;SRR=11;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	0/1:-87.0829,0,-35.1307:48:16:32:1167:570:16,32	.	.	.	.	.	.	1/1:-300.098,-28.2968,0:94:0:94:3466:0:0,94	.	.	.	.	.	.	.	0/1:-94.1955,0,-56.0831:57:22:34:1284:842:22,34	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr2	179587130	.	C	G	10479.27	.	AB=0.508696;ABP=3.31242;AC=4;AF=0.5;AN=6;AO=234;CIGAR=1X;DP=1536;DPB=460;DPRA=0;EPP=6.72222;EPPR=12.8492;GTI=0;LEN=1;MEANALT=1;MQM=41.6239;MQMR=41.9115;NS=1;NUMALT=1;ODDS=1323.8;PAIRED=0.991453;PAIREDR=0.986726;PAO=0;PQA=0;PQR=0;PRO=0;QA=8641;QR=8471;RO=226;RPL=182;RPP=159.839;RPPR=106.934;RPR=52;RUN=1;SAF=113;SAP=3.60421;SAR=121;SF=5,12,20;SRF=112;SRP=3.04873;SRR=114;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	0/1:-607.394,0,-593.933:460:226:234:8641:8471:226,234	.	.	.	.	.	.	1/1:-1865.78,-175.5,0:584:0:583:21595:0:0,583	.	.	.	.	.	.	.	0/1:-762.254,0,-529.335:492:211:280:10535:7822:211,280	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr2	179589058	.	G	A	5886.95	.	AB=0.524775;ABP=5.3774;AC=1;AF=0.5;AN=2;AO=233;CIGAR=1X;DP=444;DPB=444;DPRA=0;EPP=5.10722;EPPR=31.9187;GTI=0;LEN=1;MEANALT=1;MQM=41.8884;MQMR=41.9716;NS=1;NUMALT=1;ODDS=1220.59;PAIRED=0.991416;PAIREDR=0.990521;PAO=0;PQA=0;PQR=0;PRO=0;QA=8656;QR=7908;RO=211;RPL=47;RPP=183.075;RPPR=88.2329;RPR=186;RUN=1;SAF=112;SAP=3.76519;SAR=121;SF=10;SRF=99;SRP=4.74954;SRR=112;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	0/1:-615.653,0,-549.38:444:211:233:8656:7908:211,233	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr2	179593270	.	A	G	5991.15	.	AB=0.523404;ABP=5.24645;AC=1;AF=0.5;AN=2;AO=246;CIGAR=1X;DP=470;DPB=470;DPRA=0;EPP=28.7502;EPPR=25.3454;GTI=0;LEN=1;MEANALT=1;MQM=41.7561;MQMR=41.8125;NS=1;NUMALT=1;ODDS=1271.17;PAIRED=0.987805;PAIREDR=0.991071;PAO=0;PQA=0;PQR=0;PRO=0;QA=8821;QR=8325;RO=224;RPL=98;RPP=25.0781;RPPR=42.7172;RPR=148;RUN=1;SAF=182;SAP=125.919;SAR=64;SF=25;SRF=164;SRP=107.861;SRR=60;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-624.208,0,-576.637:470:224:246:8821:8325:224,246	.	.	.	.	.	.	.	.	.	.	.
+chr2	179593352	.	C	T	3899.65	.	AB=0.503333;ABP=3.03925;AC=1;AF=0.5;AN=2;AO=151;CIGAR=1X;DP=300;DPB=300;DPRA=0;EPP=4.75035;EPPR=12.1188;GTI=0;LEN=1;MEANALT=1;MQM=41.8742;MQMR=41.9866;NS=1;NUMALT=1;ODDS=875.559;PAIRED=1;PAIREDR=0.993289;PAO=0;PQA=0;PQR=0;PRO=0;QA=5660;QR=5547;RO=149;RPL=66;RPP=8.2017;RPPR=6.28937;RPR=85;RUN=1;SAF=90;SAP=15.1044;SAR=61;SF=10;SRF=87;SRP=12.1188;SRR=62;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	0/1:-398.768,0,-389.291:300:149:151:5660:5547:149,151	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr2	179593503	.	G	T	1852.18	.	AB=0.5;ABP=3.0103;AC=1;AF=0.5;AN=2;AO=74;CIGAR=1X;DP=148;DPB=148;DPRA=0;EPP=7.23587;EPPR=3.47981;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=42;NS=1;NUMALT=1;ODDS=409.603;PAIRED=0.986486;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2744;QR=2640;RO=74;RPL=46;RPP=12.5178;RPPR=7.23587;RPR=28;RUN=1;SAF=35;SAP=3.47981;SAR=39;SF=0;SRF=38;SRP=3.12768;SRR=36;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	0/1:-192.917,0,-184.651:148:74:74:2744:2640:74,74	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr2	179595117	.	C	G	2218.60	.	AB=0.481818;ABP=3.32615;AC=4;AF=0.5;AN=6;AO=53;CIGAR=1X;DP=367;DPB=110;DPRA=0;EPP=12.2288;EPPR=16.763;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=41.6667;NS=1;NUMALT=1;ODDS=289.19;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1922;QR=2077;RO=57;RPL=27;RPP=3.05127;RPPR=3.9627;RPR=26;RUN=1;SAF=36;SAP=17.8009;SAR=17;SF=5,12,20;SRF=36;SRP=11.5819;SRR=21;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	0/1:-134.035,0,-146.246:110:57:53:1922:2077:57,53	.	.	.	.	.	.	1/1:-437.408,-42.4452,0:141:0:141:5060:0:0,141	.	.	.	.	.	.	.	0/1:-128.872,0,-173.838:116:65:51:1885:2403:65,51	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr2	179595372	.	T	C	8161.14	.	AB=0.523026;ABP=5.81036;AC=1;AF=0.5;AN=2;AO=318;CIGAR=1X;DP=608;DPB=608;DPRA=0;EPP=21.4746;EPPR=27.4225;GTI=0;LEN=1;MEANALT=2;MQM=41.805;MQMR=41.9516;NS=1;NUMALT=1;ODDS=1635.99;PAIRED=1;PAIREDR=0.99308;PAO=0;PQA=0;PQR=0;PRO=0;QA=11768;QR=10563;RO=289;RPL=209;RPP=71.2956;RPPR=102.38;RPR=109;RUN=1;SAF=162;SAP=3.25613;SAR=156;SF=25;SRF=144;SRP=3.01781;SRR=145;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-832.75,0,-730.909:608:289:318:11768:10563:289,318	.	.	.	.	.	.	.	.	.	.	.
+chr2	179597007	.	T	C	3219.30	.	AB=0.542373;ABP=6.69076;AC=1;AF=0.5;AN=2;AO=128;CIGAR=1X;DP=236;DPB=236;DPRA=0;EPP=3.62103;EPPR=7.57648;GTI=0;LEN=1;MEANALT=2;MQM=41.6562;MQMR=41.8224;NS=1;NUMALT=1;ODDS=599.181;PAIRED=0.984375;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=4697;QR=3934;RO=107;RPL=94;RPP=64.083;RPPR=15.6941;RPR=34;RUN=1;SAF=53;SAP=11.2212;SAR=75;SF=10;SRF=45;SRP=8.8753;SRR=62;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	0/1:-336.257,0,-269.558:236:107:128:4697:3934:107,128	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr2	179598139	.	C	A	2042.47	.	AB=0.33677;ABP=70.3558;AC=1;AF=0.5;AN=2;AO=98;CIGAR=1X;DP=291;DPB=291;DPRA=0;EPP=3.09893;EPPR=4.37169;GTI=0;LEN=1;MEANALT=1;MQM=41.7755;MQMR=41.9689;NS=1;NUMALT=1;ODDS=470.295;PAIRED=0;PAIREDR=0.00518135;PAO=0;PQA=0;PQR=0;PRO=0;QA=3624;QR=6981;RO=193;RPL=68;RPP=35.0063;RPPR=113.283;RPR=30;RUN=1;SAF=26;SAP=49.8964;SAR=72;SF=21;SRF=66;SRP=44.8758;SRR=127;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-225.779,0,-518.036:291:193:98:3624:6981:193,98	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr2	179598228	.	A	G	2018.13	.	AB=0.425926;ABP=10.7311;AC=3;AF=0.5;AN=6;AO=69;CIGAR=1X;DP=535;DPB=162;DPRA=0;EPP=72.5289;EPPR=73.366;GTI=0;LEN=1;MEANALT=2;MQM=41.942;MQMR=41.6;NS=1;NUMALT=1;ODDS=329.165;PAIRED=0.985507;PAIREDR=0.988889;PAO=0;PQA=0;PQR=0;PRO=0;QA=2357;QR=3171;RO=90;RPL=33;RPP=3.29354;RPPR=5.42305;RPR=36;RUN=1;SAF=39;SAP=5.55942;SAR=30;SF=5,12,20;SRF=48;SRP=3.87889;SRR=42;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	0/1:-157.582,0,-226.456:162:90:69:2357:3171:90,69	.	.	.	.	.	.	0/1:-203.198,0,-210.767:173:84:87:2947:3016:84,87	.	.	.	.	.	.	.	0/1:-289.499,0,-211.089:200:88:112:4031:3138:88,112	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr2	179600563	.	G	A	6366.44	.	AB=0;ABP=0;AC=26;AF=1;AN=26;AO=176;CIGAR=1X;DP=2573;DPB=177;DPRA=0;EPP=3.45446;EPPR=0;GTI=0;LEN=1;MEANALT=2;MQM=41.9886;MQMR=0;NS=1;NUMALT=1;ODDS=248.593;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=6660;QR=0;RO=0;RPL=89;RPP=3.05965;RPPR=0;RPR=87;RUN=1;SAF=104;SAP=15.6443;SAR=72;SF=0,3,5,6,9,10,12,16,20,21,24,25,27;SRF=0;SRP=0;SRR=0;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	1/1:-575.211,-52.9813,0:177:0:176:6660:0:0,176	.	.	1/1:-555.666,-50.6761,0:175:1:173:6475:19:1,173	.	1/1:-707.869,-65.3235,0:218:0:217:8225:0:0,217	1/1:-464.471,-43.0473,0:143:0:143:5414:0:0,143	.	.	1/1:-473.849,-44.2514,0:147:0:147:5493:0:0,147	1/1:-689.762,-64.7215,0:215:0:215:8099:0:0,215	.	1/1:-999.613,-91.5131,0:304:0:304:11587:0:0,304	.	.	.	1/1:-602.172,-55.0885,0:183:0:183:6986:0:0,183	.	.	.	1/1:-715.939,-66.2266,0:220:0:220:8361:0:0,220	1/1:-352.467,-32.8123,0:109:0:109:4073:0:0,109	.	.	1/1:-350.672,-32.2102,0:107:0:107:4060:0:0,107	1/1:-927.364,-85.7936,0:285:0:285:10765:0:0,285	.	1/1:-938.032,-87.2987,0:290:0:290:10872:0:0,290	.	.	.	.	.	.	.	.	.
+chr2	179605180	.	C	T	10036.40	.	AB=0.414868;ABP=29.2606;AC=4;AF=0.5;AN=6;AO=173;CIGAR=1X;DP=1478;DPB=417;DPRA=0;EPP=15.0726;EPPR=10.5879;GTI=0;LEN=1;MEANALT=2;MQM=41.9884;MQMR=41.9253;NS=1;NUMALT=1;ODDS=952.04;PAIRED=0.976879;PAIREDR=0.991701;PAO=0;PQA=0;PQR=0;PRO=0;QA=6353;QR=8933;RO=241;RPL=72;RPP=13.5664;RPPR=43.4574;RPR=101;RUN=1;SAF=90;SAP=3.62534;SAR=83;SF=5,12,20;SRF=118;SRP=3.23556;SRR=123;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	0/1:-425.277,0,-649.05:417:241:173:6353:8933:241,173	.	.	.	.	.	.	1/1:-1946.68,-181.521,0:605:0:603:22546:0:0,603	.	.	.	.	.	.	.	0/1:-682.219,0,-505.204:456:201:254:9512:7406:201,254	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr2	179605725	.	T	C	5726.69	.	AB=0.495017;ABP=3.07523;AC=2;AF=0.5;AN=4;AO=149;CIGAR=1X;DP=822;DPB=301;DPRA=0;EPP=12.1188;EPPR=5.44062;GTI=0;LEN=1;MEANALT=2;MQM=41.8389;MQMR=41.8609;NS=1;NUMALT=1;ODDS=859.101;PAIRED=0.986577;PAIREDR=0.986755;PAO=0;PQA=0;PQR=0;PRO=0;QA=5551;QR=5529;RO=151;RPL=92;RPP=20.863;RPPR=27.1841;RPR=57;RUN=1;SAF=57;SAP=20.863;SAR=92;SF=10,27;SRF=47;SRP=49.7329;SRR=104;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	0/1:-390.69,0,-387.438:301:151:149:5551:5529:151,149	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-788.909,0,-562.372:521:223:298:10925:8370:223,298	.	.	.	.	.	.	.	.	.
+chr2	179606538	.	G	A	1377.45	.	AB=0.458333;ABP=4.81986;AC=1;AF=0.5;AN=2;AO=55;CIGAR=1X;DP=120;DPB=120;DPRA=0;EPP=27.6861;EPPR=23.8898;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=42;NS=1;NUMALT=1;ODDS=317.169;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2117;QR=2466;RO=65;RPL=31;RPP=4.94488;RPPR=3.04371;RPR=24;RUN=1;SAF=26;SAP=3.36563;SAR=29;SF=10;SRF=29;SRP=4.64726;SRR=36;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	0/1:-146.71,0,-177.159:120:65:55:2117:2466:65,55	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr2	179612373	.	A	C	2976.97	.	AB=0.452107;ABP=8.21019;AC=1;AF=0.5;AN=2;AO=118;CIGAR=1X;DP=261;DPB=261;DPRA=0;EPP=4.18805;EPPR=6.00754;GTI=0;LEN=1;MEANALT=2;MQM=41.7966;MQMR=41.838;NS=1;NUMALT=1;ODDS=685.474;PAIRED=1;PAIREDR=0.985915;PAO=0;PQA=0;PQR=0;PRO=0;QA=4448;QR=5285;RO=142;RPL=59;RPP=3.0103;RPPR=50.9662;RPR=59;RUN=1;SAF=58;SAP=3.08391;SAR=60;SF=10;SRF=79;SRP=6.92507;SRR=63;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	0/1:-305.012,0,-377.75:261:142:118:4448:5285:142,118	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr2	179612383	.	C	T	984.26	.	AB=0.255411;ABP=123.043;AC=1;AF=0.5;AN=2;AO=59;CIGAR=1X;DP=231;DPB=231;DPRA=0;EPP=4.81373;EPPR=25.2805;GTI=0;LEN=1;MEANALT=1;MQM=41.678;MQMR=41.8779;NS=1;NUMALT=1;ODDS=226.634;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=2203;QR=6284;RO=172;RPL=36;RPP=9.23028;RPPR=54.7216;RPR=23;RUN=1;SAF=41;SAP=22.4799;SAR=18;SF=21;SRF=99;SRP=11.5447;SRR=73;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-119.896,0,-473.883:231:172:59:2203:6284:172,59	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr2	179613179	.	G	A	1146.45	.	AB=0.430894;ABP=8.11238;AC=1;AF=0.5;AN=2;AO=53;CIGAR=1X;DP=123;DPB=123;DPRA=0;EPP=14.851;EPPR=4.99565;GTI=0;LEN=1;MEANALT=1;MQM=41.6415;MQMR=40.9714;NS=1;NUMALT=1;ODDS=263.979;PAIRED=1;PAIREDR=0.928571;PAO=0;PQA=0;PQR=0;PRO=0;QA=1858;QR=2548;RO=70;RPL=18;RPP=14.851;RPPR=18.0245;RPR=35;RUN=1;SAF=33;SAP=9.93443;SAR=20;SF=3;SRF=43;SRP=10.9517;SRR=27;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	0/1:-124.233,0,-182.396:123:70:53:1858:2548:70,53	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr2	179613191	.	T	C	705.61	.	AB=0.316239;ABP=37.327;AC=1;AF=0.5;AN=2;AO=37;CIGAR=1X;DP=117;DPB=117;DPRA=0;EPP=7.76406;EPPR=24.2907;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=41.975;NS=1;NUMALT=1;ODDS=162.474;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1332;QR=3072;RO=80;RPL=15;RPP=5.88603;RPPR=3.44459;RPR=22;RUN=1;SAF=20;SAP=3.5385;SAR=17;SF=21;SRF=46;SRP=6.91895;SRR=34;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-80.6321,0,-230.05:117:80:37:1332:3072:80,37	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr2	179614952	.	A	G	7955.16	.	AB=0;ABP=0;AC=26;AF=1;AN=26;AO=259;CIGAR=1X;DP=3290;DPB=259;DPRA=0;EPP=10.0613;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=41.9691;MQMR=0;NS=1;NUMALT=1;ODDS=363.655;PAIRED=0.996139;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=9537;QR=0;RO=0;RPL=124;RPP=4.02477;RPPR=0;RPR=135;RUN=1;SAF=114;SAP=11.0674;SAR=145;SF=0,3,5,6,9,10,12,16,20,21,24,25,27;SRF=0;SRP=0;SRR=0;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	1/1:-826.409,-77.9668,0:259:0:259:9537:0:0,259	.	.	1/1:-701.029,-65.0225,0:216:0:216:8107:0:0,216	.	1/1:-847.555,-80.676,0:270:0:268:9788:0:0,268	1/1:-613.953,-57.7978,0:193:0:192:7090:0:0,192	.	.	1/1:-591.543,-54.6937,0:187:1:186:6845:16:1,186	1/1:-638.8,-60.206,0:200:0:200:7386:0:0,200	.	1/1:-973.573,-91.5131,0:305:0:304:11271:0:0,304	.	.	.	1/1:-734.372,-68.6348,0:228:0:228:8495:0:0,228	.	.	.	1/1:-933.025,-86.6966,0:288:0:288:10805:0:0,288	1/1:-552.631,-53.5833,0:178:0:178:6391:0:0,178	.	.	1/1:-477.153,-44.5524,0:149:0:148:5510:0:0,148	1/1:-1474.4,-140.117,0:472:1:469:17047:16:1,469	.	1/1:-1079.46,-102.193,0:345:1:343:12499:16:1,343	.	.	.	.	.	.	.	.	.
+chr2	179615887	.	T	C	3473.00	.	AB=0;ABP=0;AC=25;AF=1;AN=26;AO=104;CIGAR=1X;DP=1554;DPB=104;DPRA=0;EPP=73.2491;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=41.8269;MQMR=0;NS=1;NUMALT=1;ODDS=148.78;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=3782;QR=0;RO=0;RPL=32;RPP=36.4176;RPPR=0;RPR=72;RUN=1;SAF=63;SAP=13.116;SAR=41;SF=0,3,5,6,9,10,12,16,20,21,24,25,27;SRF=0;SRP=0;SRR=0;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	1/1:-328.762,-31.3071,0:104:0:104:3782:0:0,104	.	.	1/1:-359.732,-34.0164,0:113:0:113:4144:0:0,113	.	1/1:-351.847,-33.4143,0:111:0:111:4063:0:0,111	1/1:-293.439,-28.2968,0:94:0:94:3375:0:0,94	.	.	1/1:-265.127,-26.1896,0:88:0:87:3102:0:0,87	0/1:-112.937,0,-150.446:103:56:47:1683:2094:56,47	.	1/1:-477.247,-45.1545,0:150:0:150:5515:0:0,150	.	.	.	1/1:-361.886,-32.7836,0:115:1:113:4189:17:1,113	.	.	.	1/1:-389.744,-36.7257,0:122:0:122:4488:0:0,122	1/1:-283.314,-29.5009,0:98:0:98:3306:0:0,98	.	.	1/1:-189.65,-18.0618,0:61:0:60:2182:0:0,60	1/1:-664.632,-64.1194,0:215:0:213:7659:0:0,213	.	1/1:-554.64,-54.1854,0:180:0:180:6433:0:0,180	.	.	.	.	.	.	.	.	.
+chr2	179615931	.	C	G	4950.65	.	AB=0;ABP=0;AC=26;AF=1;AN=26;AO=162;CIGAR=1X;DP=2045;DPB=162;DPRA=0;EPP=3.49285;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=41.6667;MQMR=0;NS=1;NUMALT=1;ODDS=229.185;PAIRED=0.987654;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=6146;QR=0;RO=0;RPL=53;RPP=45.0457;RPPR=0;RPR=109;RUN=1;SAF=119;SAP=80.4327;SAR=43;SF=0,3,5,6,9,10,12,16,20,21,24,25,27;SRF=0;SRP=0;SRR=0;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	1/1:-527.067,-48.7669,0:162:0:162:6146:0:0,162	.	.	1/1:-482.073,-44.2514,0:147:0:147:5586:0:0,147	.	1/1:-484.199,-44.5524,0:149:0:148:5626:0:0,148	1/1:-460.374,-42.7463,0:142:0:142:5327:0:0,142	.	.	1/1:-360.684,-34.6185,0:115:0:115:4238:0:0,115	1/1:-402.694,-37.0267,0:123:0:123:4666:0:0,123	.	1/1:-585.975,-54.1854,0:180:0:180:6792:0:0,180	.	.	.	1/1:-475.754,-43.6494,0:145:0:145:5513:0:0,145	.	.	.	1/1:-477.837,-44.5524,0:150:0:148:5542:0:0,148	1/1:-380.302,-36.7257,0:122:0:122:4495:0:0,122	.	.	1/1:-249.84,-23.4803,0:78:0:78:2883:0:0,78	1/1:-920.741,-85.7936,0:286:0:285:10656:0:0,285	.	1/1:-792.981,-74.0534,0:246:0:246:9223:0:0,246	.	.	.	.	.	.	.	.	.
+chr2	179615994	.	T	C	5088.08	.	AB=0;ABP=0;AC=26;AF=1;AN=26;AO=170;CIGAR=1X;DP=2094;DPB=170;DPRA=0;EPP=84.7598;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=41.7882;MQMR=0;NS=1;NUMALT=1;ODDS=240.275;PAIRED=0.982353;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=6395;QR=0;RO=0;RPL=94;RPP=7.14887;RPPR=0;RPR=76;RUN=1;SAF=99;SAP=13.0246;SAR=71;SF=0,3,5,6,9,10,12,16,20,21,24,25,27;SRF=0;SRP=0;SRR=0;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	1/1:-551.543,-51.1751,0:170:0:170:6395:0:0,170	.	.	1/1:-455.693,-41.8432,0:139:0:139:5268:0:0,139	.	1/1:-541.674,-50.573,0:168:0:168:6259:0:0,168	1/1:-450.627,-42.1442,0:140:0:140:5202:0:0,140	.	.	1/1:-339.42,-32.2102,0:107:0:107:3946:0:0,107	1/1:-404.331,-37.3277,0:126:0:124:4675:0:0,124	.	1/1:-642.904,-59.905,0:200:0:199:7429:0:0,199	.	.	.	1/1:-464.927,-43.3483,0:144:0:144:5387:0:0,144	.	.	.	1/1:-506.696,-47.8638,0:159:0:159:5882:0:0,159	1/1:-376.293,-35.5215,0:118:0:118:4385:0:0,118	.	.	1/1:-252.638,-23.7814,0:79:0:79:2910:0:0,79	1/1:-915.689,-85.4925,0:284:0:284:10585:0:0,284	.	1/1:-840.638,-78.2678,0:260:0:260:9708:0:0,260	.	.	.	.	.	.	.	.	.
+chr2	179616770	.	GAAAAAAAAAAAAAAACCTTT	GAAAAAAAAAAAAAACCTTT,GAAAAAAAAAAAAACCTTT	1257.70	.	AB=0;ABP=0;AC=13,4;AF=1;AN=26;AO=61;CIGAR=1M1D19M;DP=1454;DPB=80.7143;DPRA=0;EPP=13.2981;EPPR=3.32051;GTI=0;LEN=1;MEANALT=11;MQM=41.541;MQMR=42;NS=1;NUMALT=1;ODDS=36.3243;PAIRED=1;PAIREDR=1;PAO=0.333333;PQA=6;PQR=6;PRO=0.333333;QA=2002;QR=239;RO=7;RPL=17;RPP=28.9612;RPPR=5.80219;RPR=44;RUN=1;SAF=29;SAP=3.33068;SAR=32;SF=0,3,5,6,9,10,12,16,20,21,24,25,27;SRF=4;SRP=3.32051;SRR=3;TYPE=del	GT:GL:DP:RO:AO:QA:QR:AD	1/1:-154.03,-0.380661,0,.,.,.:85:7:61,.:2002,.:239:7,61	.	.	0/1:-179.272,0,-7.06902,.,.,.:99:10:68,.:2337,.:359:10,68	.	1/2:-184.907,-15.9813,-28.1901,-140.18,0,-167.129:119:12:67,18:2207,617:409:12,67,18	0/2:-26.8919,.,.,0,.,-46.3162:57:20:.,13:.,437:676:20,13	.	.	1/2:-108.371,-42.469,-42.1267,-58.4286,0,-59.5898:71:3:29,24:859,659:106:3,29,24	0/1:-109.953,0,-58.8005,.,.,.:82:26:45,.:1504,.:914:26,45	.	0/1:-215.188,0,-29.174,-167.357,-1.20156,-215.778:150:21:87,23:2843,702:739:21,87,23	.	.	.	0/1:-69.407,0,-108.706,.,.,.:111:43:30,.:1077,.:1545:43,30	.	.	.	0/1:-115.544,0,-109.727,.,.,.:136:46:49,.:1650,.:1627:46,49	0/1:-36.2322,0,-99.5951,.,.,.:93:40:20,.:632,.:1372:40,20	.	.	0/1:-50.6021,0,-35.9672,.,.,.:51:15:22,.:708,.:538:15,22	1/2:-345.013,-17.9198,-51.4806,-262.248,0,-324.689:216:26:130,34:4292,1170:930:26,130,34	.	0/1:-192.096,0,-88.851,.,.,.:184:42:84,.:2643,.:1496:42,84	.	.	.	.	.	.	.	.	.
+chr2	179620951	.	C	T	5012.31	.	AB=0;ABP=0;AC=25;AF=1;AN=26;AO=163;CIGAR=1X;DP=2154;DPB=164;DPRA=0;EPP=6.00773;EPPR=5.18177;GTI=0;LEN=1;MEANALT=1;MQM=41.4969;MQMR=42;NS=1;NUMALT=1;ODDS=225.255;PAIRED=0.981595;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=6131;QR=16;RO=1;RPL=96;RPP=14.214;RPPR=5.18177;RPR=67;RUN=1;SAF=83;SAP=3.1302;SAR=80;SF=0,3,5,6,9,10,12,16,20,21,24,25,27;SRF=0;SRP=5.18177;SRR=1;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	1/1:-523.163,-47.77,0:164:1:163:6131:16:1,163	.	.	1/1:-492.706,-45.4555,0:151:0:151:5709:0:0,151	.	1/1:-574.762,-53.2823,0:177:0:177:6655:0:0,177	1/1:-420.523,-38.8329,0:129:0:129:4873:0:0,129	.	.	1/1:-399.689,-37.0267,0:123:0:123:4625:0:0,123	0/1:-142.35,0,-223.035:141:83:58:2133:3061:83,58	.	1/1:-686.515,-63.8184,0:212:0:212:7964:0:0,212	.	.	.	1/1:-524.998,-48.7669,0:162:0:162:6081:0:0,162	.	.	.	1/1:-618.098,-57.7978,0:193:0:192:7157:0:0,192	1/1:-312.592,-30.404,0:101:0:101:3635:0:0,101	.	.	1/1:-394.049,-36.7257,0:122:0:122:4560:0:0,122	1/1:-778.748,-72.8493,0:242:0:242:9022:0:0,242	.	1/1:-756.363,-71.3441,0:237:0:237:8808:0:0,237	.	.	.	.	.	.	.	.	.
+chr2	179621477	.	C	T	8572.27	.	AB=0;ABP=0;AC=26;AF=1;AN=26;AO=247;CIGAR=1X;DP=3666;DPB=247;DPRA=0;EPP=85.7285;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=41.7814;MQMR=0;NS=1;NUMALT=1;ODDS=347.02;PAIRED=0.995951;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=9241;QR=0;RO=0;RPL=171;RPP=82.3526;RPPR=0;RPR=76;RUN=1;SAF=83;SAP=60.6906;SAR=164;SF=0,3,5,6,9,10,12,16,20,21,24,25,27;SRF=0;SRP=0;SRR=0;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	1/1:-799.224,-74.3544,0:247:0:247:9241:0:0,247	.	.	1/1:-887.423,-84.5894,0:283:0:281:10241:0:0,281	.	1/1:-894.425,-84.7967,0:287:1:286:10370:16:1,286	1/1:-646.738,-61.1091,0:203:0:203:7472:0:0,203	.	.	1/1:-677.533,-64.7215,0:215:0:215:7828:0:0,215	1/1:-850.845,-80.375,0:268:0:267:9825:0:0,267	.	1/1:-1353.34,-128.239,0:428:0:426:15621:0:0,426	.	.	.	1/1:-873.627,-81.5791,0:272:0:271:10120:0:0,271	.	.	.	1/1:-1107.15,-104.758,0:348:0:348:12818:0:0,348	1/1:-618.734,-57.5027,0:196:1:195:7166:15:1,195	.	.	1/1:-412.26,-38.8329,0:129:0:129:4767:0:0,129	1/1:-1321.77,-126.194,0:425:1:423:15341:16:1,423	.	1/1:-1151.81,-106.838,0:365:2:363:13373:32:2,363	.	.	.	.	.	.	.	.	.
+chr2	179623758	.	C	T	7650.13	.	AB=0;ABP=0;AC=25;AF=1;AN=26;AO=216;CIGAR=1X;DP=3228;DPB=216;DPRA=0;EPP=8.80089;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=41.8426;MQMR=0;NS=1;NUMALT=1;ODDS=304.045;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=8143;QR=0;RO=0;RPL=73;RPP=52.2706;RPPR=0;RPR=143;RUN=1;SAF=111;SAP=3.37221;SAR=105;SF=0,3,5,6,9,10,12,16,20,21,24,25,27;SRF=0;SRP=0;SRR=0;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	1/1:-701.111,-65.0225,0:216:0:216:8143:0:0,216	.	.	1/1:-678.605,-62.9153,0:209:0:209:7854:0:0,209	.	1/1:-920.813,-85.1915,0:283:0:283:10691:0:0,283	1/1:-585.408,-55.0885,0:183:0:183:6820:0:0,183	.	.	1/1:-604.697,-54.0443,0:192:1:190:7079:39:1,190	0/1:-244.326,0,-276.226:196:103:93:3513:3874:103,93	.	1/1:-1048.93,-97.2327,0:323:0:323:12144:0:0,323	.	.	.	1/1:-669.374,-62.6142,0:208:0:208:7784:0:0,208	.	.	.	1/1:-886.646,-81.5791,0:272:0:271:10285:0:0,271	1/1:-601.509,-55.9916,0:186:0:186:6971:0:0,186	.	.	1/1:-490.993,-44.8535,0:149:0:149:5684:0:0,149	1/1:-1498.91,-138.402,0:465:1:463:17362:15:1,463	.	1/1:-1119.87,-104.156,0:346:0:346:12964:0:0,346	.	.	.	.	.	.	.	.	.
+chr2	179629363	.	T	C	17244.90	.	AB=0;ABP=0;AC=26;AF=1;AN=26;AO=530;CIGAR=1X;DP=7140;DPB=530;DPRA=0;EPP=3.1578;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=41.9925;MQMR=0;NS=1;NUMALT=1;ODDS=739.341;PAIRED=0.996226;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=19854;QR=0;RO=0;RPL=158;RPP=190.642;RPPR=0;RPR=372;RUN=1;SAF=292;SAP=14.9575;SAR=238;SF=0,3,5,6,9,10,12,16,20,21,24,25,27;SRF=0;SRP=0;SRR=0;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	1/1:-1715.88,-159.546,0:530:0:530:19854:0:0,530	.	.	1/1:-1642.27,-151.885,0:510:1:508:19032:15:1,508	.	1/1:-2256.63,-210.692,0:706:1:704:26186:17:1,704	1/1:-1284.03,-119.014,0:401:1:400:14891:17:1,400	.	.	1/1:-1377.93,-129.443,0:432:0:430:15964:0:0,430	1/1:-1801.31,-167.975,0:558:0:558:20864:0:0,558	.	1/1:-2649.25,-245.717,0:836:4:831:30859:65:4,831	.	.	.	1/1:-1677.41,-156.536,0:523:0:520:19430:0:0,520	.	.	.	1/1:-2258.68,-212.226,0:706:0:705:26231:0:0,705	1/1:-850.124,-80.676,0:269:0:268:9842:0:0,268	.	.	1/1:-816.465,-76.1606,0:253:0:253:9436:0:0,253	1/1:-2490.99,-236.014,0:789:1:788:28861:15:1,788	.	1/1:-1982.99,-188.746,0:627:0:627:22957:0:0,627	.	.	.	.	.	.	.	.	.
+chr2	179629461	.	C	T	13482.05	.	AB=0;ABP=0;AC=25;AF=1;AN=26;AO=414;CIGAR=1X;DP=5857;DPB=414;DPRA=0;EPP=9.07364;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=41.8937;MQMR=0;NS=1;NUMALT=1;ODDS=578.531;PAIRED=0.987923;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=15623;QR=0;RO=0;RPL=323;RPP=285.323;RPPR=0;RPR=91;RUN=1;SAF=185;SAP=13.1648;SAR=229;SF=0,3,5,6,9,10,12,16,20,21,24,25,27;SRF=0;SRP=0;SRR=0;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	1/1:-1347.58,-124.626,0:414:0:414:15623:0:0,414	.	.	1/1:-1264.19,-117.402,0:390:0:390:14651:0:0,390	.	1/1:-1860.03,-172.189,0:573:0:572:21589:0:0,572	1/1:-1096.22,-102.049,0:339:0:339:12727:0:0,339	.	.	1/1:-1108.23,-102.327,0:346:1:344:12874:17:1,344	0/1:-492.174,0,-638.576:433:242:191:7207:8860:242,191	.	1/1:-2149.31,-200.041,0:667:1:666:24995:16:1,666	.	.	.	1/1:-1416.33,-130.647,0:434:0:434:16426:0:0,434	.	.	.	1/1:-1940.04,-180.618,0:600:0:600:22532:0:0,600	1/1:-714.128,-67.1297,0:225:0:223:8274:0:0,223	.	.	1/1:-708.67,-65.3235,0:217:0:217:8263:0:0,217	1/1:-2193.73,-205.709,0:688:1:687:25435:14:1,687	.	1/1:-1693.54,-159.847,0:531:0:531:19671:0:0,531	.	.	.	.	.	.	.	.	.
+chr2	179631214	.	T	C	3888.19	.	AB=0.490385;ABP=3.26085;AC=1;AF=0.5;AN=2;AO=153;CIGAR=1X;DP=312;DPB=312;DPRA=0;EPP=6.20364;EPPR=10.3269;GTI=0;LEN=1;MEANALT=2;MQM=41.8301;MQMR=41.8408;NS=1;NUMALT=1;ODDS=895.289;PAIRED=0.993464;PAIREDR=0.974522;PAO=0;PQA=0;PQR=0;PRO=0;QA=5677;QR=5972;RO=157;RPL=66;RPP=9.26925;RPPR=3.68802;RPR=87;RUN=1;SAF=81;SAP=4.1599;SAR=72;SF=10;SRF=85;SRP=5.34774;SRR=72;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	0/1:-396.803,0,-420.316:312:157:153:5677:5972:157,153	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr2	179632496	.	T	C	2394.80	.	AB=0.619355;ABP=22.1893;AC=1;AF=0.5;AN=2;AO=96;CIGAR=1X;DP=155;DPB=155;DPRA=0;EPP=8.80089;EPPR=4.35811;GTI=0;LEN=1;MEANALT=2;MQM=41.8021;MQMR=42;NS=1;NUMALT=1;ODDS=285.504;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3567;QR=2141;RO=58;RPL=11;RPP=126.875;RPPR=62.913;RPR=85;RUN=1;SAF=47;SAP=3.10078;SAR=49;SF=10;SRF=27;SRP=3.60933;SRR=31;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	0/1:-262.435,0,-138.817:155:58:96:3567:2141:58,96	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr2	179632710	.	T	C	8032.64	.	AB=0;ABP=0;AC=21;AF=1;AN=24;AO=281;CIGAR=1X;DP=3621;DPB=281;DPRA=0;EPP=105.209;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=0;NS=1;NUMALT=1;ODDS=394.154;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=10525;QR=0;RO=0;RPL=173;RPP=35.6597;RPPR=0;RPR=108;RUN=1;SAF=130;SAP=6.4182;SAR=151;SF=0,3,5,6,9,10,16,20,21,24,25,27;SRF=0;SRP=0;SRR=0;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	1/1:-910.246,-84.5894,0:281:0:281:10525:0:0,281	.	.	1/1:-963.945,-89.7069,0:300:0:298:11195:0:0,298	.	0/1:-539.105,0,-463.861:380:180:200:7586:6707:180,200	1/1:-680.576,-64.7215,0:216:0:215:7858:0:0,215	.	.	1/1:-742.851,-70.14,0:233:0:233:8601:0:0,233	0/1:-346.1,0,-347.009:262:131:130:4916:4924:131,130	.	.	.	.	.	1/1:-966.876,-86.8515,0:301:1:299:11269:39:1,299	.	.	.	0/1:-527.245,0,-373.985:337:144:192:7306:5503:144,192	1/1:-531.042,-51.7772,0:172:0:172:6119:0:0,172	.	.	1/1:-484.888,-45.7566,0:154:0:152:5597:0:0,152	1/1:-1813.05,-169.859,0:570:1:568:21001:17:1,568	.	1/1:-1325.69,-124.626,0:415:0:414:15340:0:0,414	.	.	.	.	.	.	.	.	.
+chr2	179633644	.	G	C	1585.82	.	AB=0.448052;ABP=6.62002;AC=1;AF=0.5;AN=2;AO=69;CIGAR=1X;DP=154;DPB=154;DPRA=0;EPP=10.0912;EPPR=37.9838;GTI=0;LEN=1;MEANALT=1;MQM=41.971;MQMR=41.7529;NS=1;NUMALT=1;ODDS=365.149;PAIRED=1;PAIREDR=0.988235;PAO=0;PQA=0;PQR=0;PRO=0;QA=2486;QR=3196;RO=85;RPL=49;RPP=29.4771;RPPR=4.26209;RPR=20;RUN=1;SAF=24;SAP=16.8888;SAR=45;SF=10;SRF=26;SRP=30.8307;SRR=59;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	0/1:-169.973,0,-229.508:154:85:69:2486:3196:85,69	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr2	179634392	.	A	T	2371.82	.	AB=0.504673;ABP=3.03059;AC=4;AF=0.5;AN=6;AO=54;CIGAR=1X;DP=362;DPB=107;DPRA=0;EPP=3.6537;EPPR=14.851;GTI=0;LEN=1;MEANALT=1;MQM=40.4815;MQMR=41.9245;NS=1;NUMALT=1;ODDS=274.066;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1999;QR=1961;RO=53;RPL=11;RPP=44.1879;RPPR=78.766;RPR=43;RUN=1;SAF=34;SAP=10.8919;SAR=20;SF=5,12,20;SRF=40;SRP=32.8783;SRR=13;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	0/1:-138.45,0,-137.812:107:53:54:1999:1961:53,54	.	.	.	.	.	.	1/1:-431.813,-40.338,0:134:0:134:4997:0:0,134	.	.	.	.	.	.	.	0/1:-193.303,0,-117.004:121:48:73:2720:1793:48,73	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr2	179634839	.	T	C	2923.06	.	AB=0.456604;ABP=7.34505;AC=1;AF=0.5;AN=2;AO=121;CIGAR=1X;DP=265;DPB=265;DPRA=0;EPP=14.2266;EPPR=9.04217;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=41.9722;NS=1;NUMALT=1;ODDS=673.059;PAIRED=0.983471;PAIREDR=0.993056;PAO=0;PQA=0;PQR=0;PRO=0;QA=4460;QR=5346;RO=144;RPL=35;RPP=49.688;RPPR=76.9007;RPR=86;RUN=1;SAF=78;SAP=24.9942;SAR=43;SF=10;SRF=89;SRP=20.4424;SRR=55;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	0/1:-307.575,0,-384.089:265:144:121:4460:5346:144,121	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr2	179635919	.	C	T	1748.25	.	AB=0.52;ABP=3.53145;AC=2;AF=0.5;AN=4;AO=78;CIGAR=1X;DP=278;DPB=150;DPRA=0;EPP=5.79424;EPPR=3.49285;GTI=0;LEN=1;MEANALT=1;MQM=41.9744;MQMR=41.3889;NS=1;NUMALT=1;ODDS=359.157;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2891;QR=2495;RO=72;RPL=26;RPP=21.8297;RPPR=10.7311;RPR=52;RUN=1;SAF=60;SAP=52.119;SAR=18;SF=12,20;SRF=62;SRP=84.5612;SRR=10;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-205.738,0,-172.035:150:72:78:2891:2495:72,78	.	.	.	.	.	.	.	0/1:-169.693,0,-156.246:128:61:66:2400:2256:61,66	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr2	179638238	.	G	A	2996.34	.	AB=0.48374;ABP=3.57524;AC=1;AF=0.5;AN=2;AO=119;CIGAR=1X;DP=246;DPB=246;DPRA=0;EPP=3.02855;EPPR=4.41741;GTI=0;LEN=1;MEANALT=3;MQM=41.9664;MQMR=42;NS=1;NUMALT=1;ODDS=689.933;PAIRED=0.983193;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=4409;QR=4697;RO=125;RPL=47;RPP=14.4151;RPPR=32.2123;RPR=72;RUN=1;SAF=68;SAP=8.28388;SAR=51;SF=9;SRF=65;SRP=3.44459;SRR=60;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	0/1:-308.034,0,-332.63:246:125:119:4409:4697:125,119	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr2	179638314	.	CGGT	CGC	5265.99	.	AB=0.51074;ABP=3.43008;AC=1;AF=0.5;AN=2;AO=214;CIGAR=1M1D1M1X;DP=419;DPB=365.25;DPRA=0;EPP=7.92148;EPPR=3.02167;GTI=0;LEN=3;MEANALT=4;MQM=41.2009;MQMR=41.8901;NS=1;NUMALT=1;ODDS=1076.33;PAIRED=0.985981;PAIREDR=1;PAO=1;PQA=32;PQR=0;PRO=0;QA=7595;QR=6869;RO=191;RPL=89;RPP=16.1609;RPPR=12.5716;RPR=125;RUN=1;SAF=113;SAP=4.47148;SAR=101;SF=3;SRF=101;SRP=4.38594;SRR=90;TYPE=complex	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	0/1:-536.026,0,-475.942:419:191:214:7595:6869:191,214	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr2	179638721	.	C	T	5187.59	.	AB=0.507653;ABP=3.20972;AC=1;AF=0.5;AN=2;AO=199;CIGAR=1X;DP=392;DPB=392;DPRA=0;EPP=3.2831;EPPR=5.9056;GTI=0;LEN=1;MEANALT=2;MQM=41.6985;MQMR=41.9792;NS=1;NUMALT=1;ODDS=1119.65;PAIRED=0.98995;PAIREDR=0.994792;PAO=0;PQA=0;PQR=0;PRO=0;QA=7506;QR=7055;RO=192;RPL=113;RPP=10.9651;RPPR=3.05554;RPR=86;RUN=1;SAF=109;SAP=6.9495;SAR=90;SF=10;SRF=95;SRP=3.05554;SRR=97;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	0/1:-527.139,0,-493.7:392:192:199:7506:7055:192,199	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr2	179641009	.	C	T	3487.67	.	AB=0.53012;ABP=4.97247;AC=1;AF=0.5;AN=2;AO=132;CIGAR=1X;DP=249;DPB=249;DPRA=0;EPP=4.65535;EPPR=3.48236;GTI=0;LEN=1;MEANALT=2;MQM=41.9697;MQMR=42;NS=1;NUMALT=1;ODDS=660.517;PAIRED=0.992424;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=4999;QR=4255;RO=115;RPL=82;RPP=19.8557;RPPR=9.82684;RPR=50;RUN=1;SAF=65;SAP=3.0761;SAR=67;SF=9;SRF=64;SRP=6.20142;SRR=51;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	0/1:-357.65,0,-294.837:249:115:132:4999:4255:115,132	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr2	179642425	.	G	A	5700.09	.	AB=0.506757;ABP=3.06899;AC=25;AF=0.5;AN=26;AO=75;CIGAR=1X;DP=2471;DPB=148;DPRA=0;EPP=21.1059;EPPR=5.41974;GTI=0;LEN=1;MEANALT=1;MQM=41.9733;MQMR=42;NS=1;NUMALT=1;ODDS=383.195;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2749;QR=2512;RO=73;RPL=38;RPP=3.03925;RPPR=16.1284;RPR=37;RUN=1;SAF=47;SAP=13.4623;SAR=28;SF=0,3,5,6,9,10,12,16,20,21,24,25,27;SRF=41;SRP=5.41974;SRR=32;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	0/1:-193.685,0,-174.491:148:73:75:2749:2512:73,75	.	.	1/1:-522.571,-50.272,0:167:0:167:6077:0:0,167	.	1/1:-582.255,-55.3895,0:184:0:184:6719:0:0,184	1/1:-438.525,-41.5421,0:138:0:138:5060:0:0,138	.	.	1/1:-430.599,-40.9401,0:137:0:136:4969:0:0,136	1/1:-510.966,-48.7669,0:162:0:162:5885:0:0,162	.	1/1:-764.661,-72.8493,0:243:0:242:8856:0:0,242	.	.	.	1/1:-602.816,-56.5936,0:188:0:188:6969:0:0,188	.	.	.	1/1:-608.82,-57.4967,0:193:0:191:7058:0:0,191	1/1:-407.519,-39.4349,0:132:0:131:4688:0:0,131	.	.	1/1:-277.314,-25.8886,0:87:0:86:3202:0:0,86	1/1:-1067.69,-103.253,0:343:0:343:12334:0:0,343	.	1/1:-1084.58,-104.156,0:349:0:346:12543:0:0,346	.	.	.	.	.	.	.	.	.
+chr2	179644035	.	G	A	4791.13	.	AB=0.576577;ABP=8.66395;AC=25;AF=0.5;AN=26;AO=64;CIGAR=1X;DP=2005;DPB=111;DPRA=0;EPP=19.4321;EPPR=15.095;GTI=0;LEN=1;MEANALT=2;MQM=41.7188;MQMR=41.1522;NS=1;NUMALT=1;ODDS=241.784;PAIRED=1;PAIREDR=0.978261;PAO=0;PQA=0;PQR=0;PRO=0;QA=2378;QR=1723;RO=46;RPL=28;RPP=5.18177;RPPR=3.76559;RPR=36;RUN=1;SAF=31;SAP=3.14602;SAR=33;SF=0,3,5,6,9,10,12,16,20,21,24,25,27;SRF=26;SRP=4.70971;SRR=20;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	0/1:-171.376,0,-113.005:111:46:64:2378:1723:46,64	.	.	1/1:-421.923,-38.5318,0:128:0:128:4895:0:0,128	.	1/1:-472.297,-43.9504,0:146:0:146:5542:0:0,146	1/1:-420.49,-38.5318,0:128:0:128:4870:0:0,128	.	.	1/1:-321.229,-29.5009,0:98:0:98:3718:0:0,98	1/1:-452.606,-41.8432,0:139:0:139:5269:0:0,139	.	1/1:-663.965,-61.1091,0:204:0:203:7727:0:0,203	.	.	.	1/1:-463.358,-42.7463,0:142:0:142:5395:0:0,142	.	.	.	1/1:-451.858,-41.5421,0:138:0:138:5241:0:0,138	1/1:-335.214,-31.6082,0:105:0:105:3904:0:0,105	.	.	1/1:-301.974,-27.6948,0:92:0:92:3494:0:0,92	1/1:-1039.4,-95.7275,0:318:0:318:12068:0:0,318	.	1/1:-829.742,-77.0637,0:256:0:256:9652:0:0,256	.	.	.	.	.	.	.	.	.
+chr2	179644855	.	T	C	8435.98	.	AB=0.566667;ABP=14.5915;AC=23;AF=0.5;AN=26;AO=170;CIGAR=1X;DP=3990;DPB=300;DPRA=0;EPP=55.33;EPPR=15.2816;GTI=0;LEN=1;MEANALT=2;MQM=41.5647;MQMR=42;NS=1;NUMALT=1;ODDS=735.461;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=6457;QR=4868;RO=129;RPL=102;RPP=17.7763;RPPR=21.3416;RPR=68;RUN=1;SAF=87;SAP=3.21467;SAR=83;SF=0,3,5,6,9,10,12,16,20,21,24,25,27;SRF=64;SRP=3.02713;SRR=65;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	0/1:-463.286,0,-330.493:300:129:170:6457:4868:129,170	.	.	1/1:-845.419,-78.2678,0:260:0:260:9802:0:0,260	.	1/1:-1083.64,-100.243,0:334:0:333:12559:0:0,333	1/1:-776.39,-72.5482,0:241:0:241:8988:0:0,241	.	.	1/1:-763.657,-70.7421,0:235:0:235:8853:0:0,235	0/1:-348.545,0,-351.896:268:136:132:4982:5038:136,132	.	0/1:-426.996,0,-548.129:369:204:165:6230:7637:204,165	.	.	.	1/1:-919.348,-84.5894,0:281:0:281:10671:0:0,281	.	.	.	1/1:-1127.57,-104.156,0:346:0:346:13075:0:0,346	1/1:-680.489,-63.5173,0:211:0:211:7904:0:0,211	.	.	1/1:-524.987,-48.7669,0:163:0:162:6077:0:0,162	1/1:-1674.45,-156.837,0:521:0:521:19414:0:0,521	.	1/1:-1472.67,-138.775,0:461:0:461:17046:0:0,461	.	.	.	.	.	.	.	.	.
+chr2	179650408	.	G	A	1163.60	.	AB=0.468354;ABP=3.69747;AC=7;AF=0.5;AN=14;AO=37;CIGAR=1X;DP=654;DPB=79;DPRA=0;EPP=12.9286;EPPR=3.0103;GTI=0;LEN=1;MEANALT=1;MQM=41.8919;MQMR=42;NS=1;NUMALT=1;ODDS=199.763;PAIRED=1;PAIREDR=0.97619;PAO=0;PQA=0;PQR=0;PRO=0;QA=1351;QR=1519;RO=42;RPL=22;RPP=5.88603;RPPR=10.4553;RPR=15;RUN=1;SAF=18;SAP=3.06899;SAR=19;SF=6,9,16,20,21,24,27;SRF=20;SRP=3.21711;SRR=22;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	0/1:-93.8001,0,-108.514:79:42:37:1351:1519:42,37	.	.	0/1:-98.6431,0,-97.5299:77:39:38:1401:1383:39,38	.	.	.	.	.	.	0/1:-124.546,0,-161.863:111:61:50:1817:2250:61,50	.	.	.	0/1:-158.865,0,-139.77:119:56:63:2250:2020:56,63	0/1:-150.687,0,-56.1076:83:25:58:2017:930:25,58	.	.	0/1:-63.4797,0,-70.929:52:27:25:904:992:27,25	.	.	0/1:-174.073,0,-156.114:133:64:69:2458:2249:64,69	.	.	.	.	.	.	.	.	.
+chr2	179650443	.	C	T	1519.65	.	AB=0.530973;ABP=3.95191;AC=1;AF=0.5;AN=2;AO=60;CIGAR=1X;DP=113;DPB=113;DPRA=0;EPP=44.8473;EPPR=24.6841;GTI=0;LEN=1;MEANALT=1;MQM=41.6333;MQMR=41.6604;NS=1;NUMALT=1;ODDS=285.154;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2269;QR=1916;RO=53;RPL=29;RPP=3.15506;RPPR=12.2288;RPR=31;RUN=1;SAF=30;SAP=3.0103;SAR=30;SF=27;SRF=24;SRP=4.03458;SRR=29;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-161.622,0,-132.257:113:53:60:2269:1916:53,60	.	.	.	.	.	.	.	.	.
+chr2	179650701	.	C	T	1335.47	.	AB=0;ABP=0;AC=12;AF=1;AN=18;AO=59;CIGAR=1X;DP=586;DPB=59;DPRA=0;EPP=4.81373;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=0;NS=1;NUMALT=1;ODDS=86.3965;PAIRED=0.983051;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=2204;QR=0;RO=0;RPL=24;RPP=7.46366;RPPR=0;RPR=35;RUN=1;SAF=28;SAP=3.34154;SAR=31;SF=3,5,6,10,12,20,24,25,27;SRF=0;SRP=0;SRR=0;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	1/1:-191.107,-17.7608,0:59:0:59:2204:0:0,59	.	1/1:-253.234,-23.7814,0:79:0:79:2920:0:0,79	0/1:-54.3766,0,-49.1624:42:20:21:768:705:20,21	.	.	.	0/1:-100.666,0,-60.7196:61:24:37:1371:910:24,37	.	0/1:-75.56,0,-94.7651:66:35:30:1096:1319:35,30	.	.	.	.	.	.	.	0/1:-137.478,0,-49.5707:73:23:50:1837:821:23,50	.	.	.	0/1:-47.5845,0,-49.7148:40:20:20:683:708:20,20	1/1:-300.987,-28.8989,0:96:0:96:3468:0:0,96	.	0/1:-95.6333,0,-80.9973:70:33:37:1348:1177:33,37	.	.	.	.	.	.	.	.	.
+chr2	179659108	.	T	C	2342.83	.	AB=0.502591;ABP=3.02155;AC=1;AF=0.5;AN=2;AO=97;CIGAR=1X;DP=193;DPB=193;DPRA=0;EPP=27.389;EPPR=19.6735;GTI=0;LEN=1;MEANALT=2;MQM=41.4227;MQMR=41.6;NS=1;NUMALT=1;ODDS=536.741;PAIRED=1;PAIREDR=0.989474;PAO=0;PQA=0;PQR=0;PRO=0;QA=3581;QR=3569;RO=95;RPL=22;RPP=65.8935;RPPR=67.2173;RPR=75;RUN=1;SAF=50;SAP=3.21178;SAR=47;SF=0;SRF=49;SRP=3.21602;SRR=46;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	0/1:-249.856,0,-248.028:193:95:97:3581:3569:95,97	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr2	179659294	.	C	T	2806.91	.	AB=0.46371;ABP=5.84722;AC=1;AF=0.5;AN=2;AO=115;CIGAR=1X;DP=248;DPB=248;DPRA=0;EPP=92.9093;EPPR=150.36;GTI=0;LEN=1;MEANALT=1;MQM=41.9652;MQMR=42;NS=1;NUMALT=1;ODDS=646.315;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=4337;QR=4947;RO=133;RPL=77;RPP=31.7304;RPPR=27.8435;RPR=38;RUN=1;SAF=56;SAP=3.18024;SAR=59;SF=3;SRF=69;SRP=3.41847;SRR=64;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	0/1:-300.108,0,-353.317:248:133:115:4337:4947:133,115	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr2	179659912	.	G	A	2435.27	.	AB=0.471861;ABP=4.59895;AC=1;AF=0.5;AN=2;AO=109;CIGAR=1X;DP=231;DPB=231;DPRA=0;EPP=11.7958;EPPR=7.56683;GTI=0;LEN=1;MEANALT=1;MQM=41.6239;MQMR=42;NS=1;NUMALT=1;ODDS=560.742;PAIRED=0.990826;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3901;QR=4507;RO=122;RPL=92;RPP=115.07;RPPR=62.886;RPR=17;RUN=1;SAF=31;SAP=47.0175;SAR=78;SF=12;SRF=41;SRP=31.4886;SRR=81;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-267.88,0,-321.82:231:122:109:3901:4507:122,109	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr2	179669244	.	GAAAAAAAAACAAAAGTG	GAAAAAAAAAACAAAAGTG	855.48	.	AB=0.438202;ABP=5.96253;AC=1;AF=0.5;AN=2;AO=39;CIGAR=1M1I17M;DP=89;DPB=91.5556;DPRA=0;EPP=5.73856;EPPR=3.48696;GTI=0;LEN=1;MEANALT=10;MQM=41.9487;MQMR=42;NS=1;NUMALT=1;ODDS=196.981;PAIRED=0.974359;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1371;QR=1510;RO=41;RPL=15;RPP=7.52028;RPPR=26.3669;RPR=24;RUN=1;SAF=31;SAP=32.4644;SAR=8;SF=10;SRF=29;SRP=18.3165;SRR=12;TYPE=ins	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	0/1:-95.0643,0,-107.376:89:41:39:1371:1510:41,39	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr2	220283259	.	A	G	370.02	.	AB=0;ABP=0;AC=24;AF=1;AN=24;AO=19;CIGAR=1X;DP=165;DPB=19;DPRA=0;EPP=5.8675;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=38.2105;MQMR=0;NS=1;NUMALT=1;ODDS=30.9448;PAIRED=0.631579;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=694;QR=0;RO=0;RPL=14;RPP=12.2676;RPPR=0;RPR=5;RUN=1;SAF=11;SAP=4.03889;SAR=8;SF=0,3,5,9,10,12,16,20,21,24,25,27;SRF=0;SRP=0;SRR=0;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	1/1:-56.4633,-5.71957,0:19:0:19:694:0:0,19	.	.	1/1:-25.7759,-2.40824,0:8:0:8:292:0:0,8	.	1/1:-80.3483,-7.82678,0:26:0:26:921:0:0,26	.	.	.	1/1:-20.2978,-2.10721,0:7:0:7:230:0:0,7	1/1:-27.5801,-3.0103,0:10:0:10:354:0:0,10	.	1/1:-38.5163,-3.61236,0:12:0:12:438:0:0,12	.	.	.	1/1:-56.138,-5.41854,0:18:0:18:642:0:0,18	.	.	.	1/1:-55.1503,-6.0206,0:20:0:20:669:0:0,20	1/1:-12.6216,-1.20412,0:4:0:4:141:0:0,4	.	.	1/1:-17.3875,-1.80618,0:6:0:6:195:0:0,6	1/1:-69.0849,-7.22472,0:24:0:24:828:0:0,24	.	1/1:-24.1182,-3.31133,0:11:0:11:325:0:0,11	.	.	.	.	.	.	.	.	.
+chr2	220283277	.	T	C	290.62	.	AB=0;ABP=0;AC=24;AF=1;AN=24;AO=16;CIGAR=1X;DP=135;DPB=16;DPRA=0;EPP=3.55317;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=37.5;MQMR=0;NS=1;NUMALT=1;ODDS=26.7859;PAIRED=0.75;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=558;QR=0;RO=0;RPL=15;RPP=29.6108;RPPR=0;RPR=1;RUN=1;SAF=8;SAP=3.0103;SAR=8;SF=0,3,5,9,10,12,16,20,21,24,25,27;SRF=0;SRP=0;SRR=0;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	1/1:-45.6829,-4.81648,0:16:0:16:558:0:0,16	.	.	1/1:-19.877,-1.80618,0:6:0:6:225:0:0,6	.	1/1:-75.1655,-7.22472,0:24:0:24:863:0:0,24	.	.	.	1/1:-15.5317,-1.50515,0:5:0:5:176:0:0,5	1/1:-10.8835,-1.50515,0:5:0:5:132:0:0,5	.	1/1:-23.0757,-2.40824,0:8:0:8:260:0:0,8	.	.	.	1/1:-48.4491,-4.51545,0:15:0:15:554:0:0,15	.	.	.	1/1:-43.8989,-4.81648,0:16:0:16:550:0:0,16	1/1:-6.75352,-0.60206,0:2:0:2:74:0:0,2	.	.	1/1:-19.5895,-1.80618,0:6:0:6:221:0:0,6	1/1:-60.1582,-6.0206,0:21:0:20:748:0:0,20	.	1/1:-25.8687,-3.31133,0:11:0:11:318:0:0,11	.	.	.	.	.	.	.	.	.
+chr2	220283338	.	C	A	25.96	.	AB=0.5;ABP=3.0103;AC=1;AF=0.5;AN=2;AO=2;CIGAR=1X;DP=4;DPB=4;DPRA=0;EPP=3.0103;EPPR=3.0103;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=42;NS=1;NUMALT=1;ODDS=5.08143;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=70;QR=65;RO=2;RPL=2;RPP=7.35324;RPPR=7.35324;RPR=0;RUN=1;SAF=1;SAP=3.0103;SAR=1;SF=24;SRF=1;SRP=3.0103;SRR=1;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-5.26834,0,-4.88268:4:2:2:70:65:2,2	.	.	.	.	.	.	.	.	.	.	.	.
+chr2	220283592	.	C	T	1915.27	.	AB=0.537931;ABP=4.82236;AC=1;AF=0.5;AN=2;AO=78;CIGAR=1X;DP=145;DPB=145;DPRA=0;EPP=16.4846;EPPR=8.4876;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=41.9701;NS=1;NUMALT=1;ODDS=347.964;PAIRED=1;PAIREDR=0.985075;PAO=0;PQA=0;PQR=0;PRO=0;QA=2825;QR=2360;RO=67;RPL=53;RPP=24.8364;RPPR=26.6372;RPR=25;RUN=1;SAF=29;SAP=14.1461;SAR=49;SF=25;SRF=22;SRP=20.1552;SRR=45;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-202.685,0,-162.176:145:67:78:2825:2360:67,78	.	.	.	.	.	.	.	.	.	.	.
+chr2	220284779	.	C	T	5630.08	.	AB=0.469208;ABP=5.81857;AC=13;AF=0.5;AN=20;AO=160;CIGAR=1X;DP=3682;DPB=341;DPRA=0;EPP=9.579;EPPR=3.59816;GTI=0;LEN=1;MEANALT=1;MQM=41.875;MQMR=41.8785;NS=1;NUMALT=1;ODDS=878.434;PAIRED=0.99375;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=5935;QR=6565;RO=181;RPL=27;RPP=155.502;RPPR=178.66;RPR=133;RUN=1;SAF=112;SAP=58.6;SAR=48;SF=0,3,5,6,9,12,21,24,25,27;SRF=116;SRP=34.2147;SRR=65;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	0/1:-411.581,0,-466.267:341:181:160:5935:6565:181,160	.	.	0/1:-439.806,0,-429.808:343:168:172:6260:6137:168,172	.	0/1:-490.057,0,-498.658:388:196:190:7010:7159:196,190	1/1:-914.072,-86.979,0:295:1:293:10572:17:1,293	.	.	1/1:-877.541,-81.1648,0:282:1:280:10165:39:1,280	.	.	0/1:-656.096,0,-651.039:518:260:258:9377:9417:260,258	.	.	.	.	.	.	.	.	0/1:-259.443,0,-337.638:240:132:108:3841:4727:132,108	.	.	1/1:-717.331,-67.7318,0:226:0:225:8272:0:0,225	0/1:-719.231,0,-805.875:608:315:290:10427:11413:315,290	.	0/1:-490.039,0,-576.202:441:233:207:7191:8219:233,207	.	.	.	.	.	.	.	.	.
+chr2	220285309	.	C	T	9224.65	.	AB=0.508368;ABP=3.30104;AC=13;AF=0.5;AN=20;AO=243;CIGAR=1X;DP=5146;DPB=478;DPRA=0;EPP=5.02092;EPPR=3.46308;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=41.9915;NS=1;NUMALT=1;ODDS=1379.5;PAIRED=0.995885;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=8977;QR=8636;RO=235;RPL=123;RPP=3.09072;RPPR=3.46308;RPR=120;RUN=1;SAF=126;SAP=3.73412;SAR=117;SF=0,3,5,10,12,16,20,21,25,27;SRF=131;SRP=9.74648;SRR=104;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	0/1:-634.552,0,-607.191:478:235:243:8977:8636:235,243	.	.	0/1:-538.174,0,-605.614:444:234:209:7759:8516:234,209	.	0/1:-725.179,0,-810.133:607:320:285:10521:11444:320,285	.	.	.	.	1/1:-1490.88,-141.785,0:472:0:471:17209:0:0,471	.	0/1:-757.358,0,-842.873:637:335:300:10946:11960:335,300	.	.	.	1/1:-1607.9,-152.321,0:508:0:506:18644:0:0,506	.	.	.	1/1:-1803.11,-170.68,0:572:1:570:20866:14:1,570	0/1:-273.104,0,-237.046:200:95:105:3828:3425:95,105	.	.	.	0/1:-796.09,0,-888.33:669:349:318:11516:12509:349,318	.	0/1:-679.614,0,-704.905:559:283:275:9798:10026:283,275	.	.	.	.	.	.	.	.	.
+chr2	220285375	.	G	A	5438.78	.	AB=0.522892;ABP=4.89922;AC=1;AF=0.5;AN=2;AO=217;CIGAR=1X;DP=415;DPB=415;DPRA=0;EPP=59.2985;EPPR=34.9902;GTI=0;LEN=1;MEANALT=1;MQM=41.8894;MQMR=41.9697;NS=1;NUMALT=1;ODDS=1106.51;PAIRED=0.995392;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=7917;QR=7127;RO=198;RPL=138;RPP=37.8439;RPPR=42.4916;RPR=79;RUN=1;SAF=99;SAP=6.62275;SAR=118;SF=27;SRF=93;SRP=4.58955;SRR=105;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-559.961,0,-494.353:415:198:217:7917:7127:198,217	.	.	.	.	.	.	.	.	.
+chr2	220285666	.	G	C	7189.69	.	AB=0.48139;ABP=4.22266;AC=13;AF=0.5;AN=20;AO=194;CIGAR=1X;DP=4004;DPB=403;DPRA=0;EPP=3.05507;EPPR=5.34801;GTI=0;LEN=1;MEANALT=1;MQM=41.9588;MQMR=41.9904;NS=1;NUMALT=1;ODDS=1147.18;PAIRED=0.984536;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=7338;QR=7903;RO=209;RPL=135;RPP=67.662;RPPR=61.453;RPR=59;RUN=1;SAF=89;SAP=5.87575;SAR=105;SF=0,3,5,10,12,16,20,21,25,27;SRF=89;SRP=12.9949;SRR=120;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	0/1:-512.36,0,-560.98:403:209:194:7338:7903:209,194	.	.	0/1:-409.445,0,-484.347:340:180:160:5940:6791:180,160	.	0/1:-594.212,0,-625.301:467:239:228:8515:8876:239,228	.	.	.	.	1/1:-1215.48,-113.187,0:377:0:376:14122:0:0,376	.	0/1:-584.588,0,-644.25:475:247:227:8419:9159:247,227	.	.	.	1/1:-1371.06,-127.336,0:424:0:423:15901:0:0,423	.	.	.	1/1:-1346.03,-127.637,0:426:0:424:15665:0:0,424	0/1:-212.015,0,-199.509:163:80:83:3010:2882:80,83	.	.	.	0/1:-625.755,0,-710.03:514:270:243:9051:10002:270,243	.	0/1:-512.884,0,-561.417:415:216:199:7379:7937:216,199	.	.	.	.	.	.	.	.	.
+chr2	220286142	.	G	A	10609.36	.	AB=0.507843;ABP=3.2828;AC=13;AF=0.5;AN=20;AO=259;CIGAR=1X;DP=5959;DPB=510;DPRA=0;EPP=11.0674;EPPR=43.4978;GTI=0;LEN=1;MEANALT=3;MQM=41.8533;MQMR=41.9113;NS=1;NUMALT=1;ODDS=1411.87;PAIRED=1;PAIREDR=0.991935;PAO=0;PQA=0;PQR=0;PRO=0;QA=9265;QR=8960;RO=248;RPL=150;RPP=17.1039;RPPR=19.9618;RPR=109;RUN=1;SAF=120;SAP=6.03695;SAR=139;SF=0,3,5,10,12,16,20,21,25,27;SRF=122;SRP=3.15039;SRR=126;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	0/1:-651.117,0,-626.354:510:248:259:9265:8960:248,259	.	.	0/1:-613.948,0,-719.859:542:285:255:9013:10180:285,255	.	0/1:-877.765,0,-856.314:695:342:352:12552:12267:342,352	.	.	.	.	1/1:-1825.13,-175.459,0:596:1:593:21083:38:1,593	.	0/1:-1063.55,0,-849.011:778:355:417:14980:12439:355,417	.	.	.	1/1:-1759.78,-169.607,0:569:1:566:20296:12:1,566	.	.	.	1/1:-1940.88,-186.037,0:620:0:618:22402:0:0,618	0/1:-267.444,0,-346.571:259:143:116:3951:4861:143,116	.	.	.	0/1:-927.254,0,-833.4:728:345:379:13170:12076:345,379	.	0/1:-823.663,0,-755.041:662:319:339:11756:10962:319,339	.	.	.	.	.	.	.	.	.
+chr20	30408306	.	C	G	6707.41	.	AB=0.518519;ABP=4.53837;AC=1;AF=0.5;AN=2;AO=266;CIGAR=1X;DP=513;DPB=513;DPRA=0;EPP=3.53276;EPPR=4.28141;GTI=0;LEN=1;MEANALT=2;MQM=41.7932;MQMR=41.8537;NS=1;NUMALT=1;ODDS=1453.27;PAIRED=0.992481;PAIREDR=0.987805;PAO=0;PQA=0;PQR=0;PRO=0;QA=9652;QR=9171;RO=246;RPL=150;RPP=12.4472;RPPR=3.04561;RPR=116;RUN=1;SAF=111;SAP=18.8147;SAR=155;SF=12;SRF=115;SRP=5.27004;SRR=131;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-680.873,0,-639.008:513:246:266:9652:9171:246,266	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr20	30409452	.	T	C	3858.58	.	AB=0.487889;ABP=3.37847;AC=10;AF=0.5;AN=20;AO=141;CIGAR=1X;DP=3427;DPB=289;DPRA=0;EPP=6.47542;EPPR=3.0103;GTI=0;LEN=1;MEANALT=1;MQM=41.7305;MQMR=41.8716;NS=1;NUMALT=1;ODDS=764.693;PAIRED=0.992908;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=5023;QR=5428;RO=148;RPL=98;RPP=49.5969;RPPR=59.4099;RPR=43;RUN=1;SAF=41;SAP=56.6195;SAR=100;SF=2,5,10,12,13,15,23,24,25,30;SRF=45;SRP=52.3673;SRR=103;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	0/1:-349.57,0,-383.463:289:148:141:5023:5428	.	.	0/1:-530.798,0,-478.572:394:185:208:7487:6946:185,208	.	.	.	.	0/1:-441.346,0,-332.93:308:134:172:6205:4917:134,172	.	0/1:-622.087,0,-864.771:583:324:257:9160:12062:324,257	0/1:-338.882,0,-450.008:315:173:141:4996:6303	.	0/1:-339.689,0,-468.858:335:184:150:5142:6591	.	.	.	.	.	.	.	0/1:-407.906,0,-510.525:359:194:165:5929:7147	0/1:-183.954,0,-176.202:140:68:72:2594:2518:68,72	0/1:-540.945,0,-496.032:416:193:223:7676:7197:193,223	.	.	.	.	0/1:-289.975,0,-456.712:288:168:120:4325:6279	.	.	.	.	.	.
+chr20	30414528	.	G	A	8645.28	.	AB=0.5142;ABP=4.18205;AC=1;AF=0.5;AN=2;AO=344;CIGAR=1X;DP=669;DPB=669;DPRA=0;EPP=35.7339;EPPR=5.95682;GTI=0;LEN=1;MEANALT=1;MQM=41.8169;MQMR=41.4985;NS=1;NUMALT=1;ODDS=1876.84;PAIRED=0.991279;PAIREDR=0.987692;PAO=0;PQA=0;PQR=0;PRO=0;QA=12492;QR=11907;RO=325;RPL=207;RPP=33.9412;RPPR=3.5515;RPR=137;RUN=1;SAF=153;SAP=12.1254;SAR=191;SF=25;SRF=148;SRP=8.6294;SRR=177;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-879.559,0,-823.701:669:325:344:12492:11907:325,344	.	.	.	.	.	.	.	.	.	.	.
+chr20	30414560	.	C	G	5747.90	.	AB=0.491597;ABP=3.30226;AC=10;AF=0.5;AN=20;AO=234;CIGAR=1X;DP=4608;DPB=476;DPRA=0;EPP=6.72222;EPPR=3.15506;GTI=0;LEN=1;MEANALT=3;MQM=41.2521;MQMR=41.35;NS=1;NUMALT=1;ODDS=1323.73;PAIRED=0.987179;PAIREDR=0.966667;PAO=0;PQA=0;PQR=0;PRO=0;QA=8464;QR=8664;RO=240;RPL=139;RPP=20.976;RPPR=10.1038;RPR=95;RUN=1;SAF=104;SAP=9.28344;SAR=130;SF=2,5,10,12,13,15,23,24,25,30;SRF=112;SRP=5.32654;SRR=128;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	0/1:-584.985,0,-601.448:476:240:234:8464:8664	.	.	0/1:-687.405,0,-670.29:529:264:263:9845:9597:264,263	.	.	.	.	0/1:-587.523,0,-513.376:423:201:221:8307:7410:201,221	.	0/1:-633.42,0,-682.643:517:266:249:9165:9721:266,249	0/1:-586.663,0,-593.332:463:237:226:8407:8466	.	0/1:-588.024,0,-592.902:465:233:230:8490:8466	.	.	.	.	.	.	.	0/1:-564.197,0,-636.011:461:245:215:8139:8945	0/1:-405.085,0,-294.309:275:123:152:5636:4367:123,152	0/1:-769.013,0,-828.916:629:324:302:11122:11742:324,302	.	.	.	.	0/1:-442.836,0,-497.514:370:196:172:6419:7007	.	.	.	.	.	.
+chr20	30414578	.	G	A	3966.84	.	AB=0.525727;ABP=5.58012;AC=4;AF=0.5;AN=8;AO=235;CIGAR=1X;DP=1485;DPB=447;DPRA=0;EPP=13.073;EPPR=4.48526;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=41.4906;NS=1;NUMALT=1;ODDS=1209.73;PAIRED=0.995745;PAIREDR=0.981132;PAO=0;PQA=0;PQR=0;PRO=0;QA=8659;QR=7774;RO=212;RPL=123;RPP=4.12838;RPPR=8.91015;RPR=112;RUN=1;SAF=123;SAP=4.12838;SAR=112;SF=3,21,27,35;SRF=102;SRP=3.66584;SRR=110;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	0/1:-615.714,0,-533.644:447:212:235:8659:7774:212,235	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-85.5653,0,-431.979:207:159:48:1699:5682:159,48	.	.	.	.	.	0/1:-541.248,0,-734.313:500:278:222:8031:10186:278,222	.	.	.	.	.	.	.	0/1:-389.312,0,-472.148:331:178:153:5642:6588	.
+chr20	30414621	.	C	T	6930.96	.	AB=0.518182;ABP=4.58955;AC=3;AF=0.5;AN=6;AO=285;CIGAR=1X;DP=1594;DPB=550;DPRA=0;EPP=4.29794;EPPR=4.62245;GTI=0;LEN=1;MEANALT=2;MQM=41.5439;MQMR=41.7689;NS=1;NUMALT=1;ODDS=1519.45;PAIRED=0.996491;PAIREDR=0.996212;PAO=0;PQA=0;PQR=0;PRO=0;QA=10687;QR=9625;RO=264;RPL=105;RPP=45.8683;RPPR=14.8876;RPR=180;RUN=1;SAF=148;SAP=3.93222;SAR=137;SF=11,27,34;SRF=132;SRP=3.0103;SRR=132;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	.	0/1:-751.573,0,-668.806:550:264:285:10687:9625	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-781.494,0,-747.526:586:287:299:11087:10672:287,299	.	.	.	.	.	.	0/1:-579.627,0,-633.109:458:238:220:8328:8911	.	.
+chr20	30419834	.	C	T	3500.98	.	AB=0.535156;ABP=5.75857;AC=1;AF=0.5;AN=2;AO=137;CIGAR=1X;DP=256;DPB=256;DPRA=0;EPP=7.591;EPPR=8.28388;GTI=0;LEN=1;MEANALT=1;MQM=41.8029;MQMR=41.6807;NS=1;NUMALT=1;ODDS=689.297;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=5071;QR=4450;RO=119;RPL=47;RPP=32.3173;RPPR=7.11603;RPR=90;RUN=1;SAF=69;SAP=3.02615;SAR=68;SF=3;SRF=61;SRP=3.17453;SRR=58;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	0/1:-360.592,0,-307.294:256:119:137:5071:4450:119,137	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr20	30419954	.	A	G	2335.06	.	AB=0.454023;ABP=6.20511;AC=10;AF=0.5;AN=20;AO=79;CIGAR=1X;DP=1893;DPB=174;DPRA=0;EPP=32.9436;EPPR=24.9765;GTI=0;LEN=1;MEANALT=1;MQM=40.8608;MQMR=40.8211;NS=1;NUMALT=1;ODDS=403.675;PAIRED=0.987342;PAIREDR=0.978947;PAO=0;PQA=0;PQR=0;PRO=0;QA=2808;QR=3222;RO=95;RPL=57;RPP=36.6819;RPPR=57.8914;RPR=22;RUN=1;SAF=38;SAP=3.25768;SAR=41;SF=2,5,10,12,13,15,23,24,25,30;SRF=40;SRP=8.15326;SRR=55;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	0/1:-188.506,0,-226.283:174:95:79:2808:3222	.	.	0/1:-252.467,0,-240.43:190:94:96:3563:3427:94,96	.	.	.	.	0/1:-300.514,0,-206.291:202:87:115:4169:3124:87,115	.	0/1:-334.585,0,-282.348:244:114:130:4704:4100:114,130	0/1:-239.543,0,-218.866:184:88:96:3384:3207	.	0/1:-280.026,0,-178.739:186:78:107:3860:2726	.	.	.	.	.	.	.	0/1:-257.476,0,-314.74:221:119:102:3736:4398	0/1:-119.112,0,-90.5424:81:36:44:1648:1321:36,44	0/1:-350.551,0,-301.536:254:121:133:4925:4351:121,133	.	.	.	.	0/1:-178.92,0,-224.153:157:85:72:2593:3130	.	.	.	.	.	.
+chr20	31996708	.	A	G	7551.71	.	AB=0.440171;ABP=24.8364;AC=1;AF=0.5;AN=2;AO=309;CIGAR=1X;DP=702;DPB=702;DPRA=0;EPP=3.07355;EPPR=4.25351;GTI=0;LEN=1;MEANALT=1;MQM=41.7832;MQMR=41.9949;NS=1;NUMALT=1;ODDS=1738.85;PAIRED=0.996764;PAIREDR=0.997455;PAO=0;PQA=0;PQR=0;PRO=0;QA=11337;QR=14424;RO=393;RPL=179;RPP=19.8831;RPPR=37.4942;RPR=130;RUN=1;SAF=122;SAP=32.7011;SAR=187;SF=5;SRF=169;SRP=19.7246;SRR=224;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	0/1:-769.584,0,-1039.78:702:393:309:11337:14424:393,309	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr20	32031112	.	C	A	21.22	.	AB=0.5;ABP=3.0103;AC=1;AF=0.5;AN=2;AO=2;CIGAR=1X;DP=4;DPB=4;DPRA=0;EPP=3.0103;EPPR=3.0103;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=42;NS=1;NUMALT=1;ODDS=3.82846;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=76;QR=70;RO=2;RPL=0;RPP=7.35324;RPPR=7.35324;RPR=2;RUN=1;SAF=1;SAP=3.0103;SAR=1;SF=14;SRF=1;SRP=3.0103;SRR=1;TYPE=snp	GT:GL:DP:RO:AO:QA:QR	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-5.73939,0,-5.29277:4:2:2:76:70	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr20	32031206	.	G	A	49.29	.	AB=0.5;ABP=3.0103;AC=1;AF=0.5;AN=2;AO=4;CIGAR=1X;DP=8;DPB=8;DPRA=0;EPP=3.0103;EPPR=3.0103;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=42;NS=1;NUMALT=1;ODDS=11.3489;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=132;QR=141;RO=4;RPL=4;RPP=11.6962;RPPR=11.6962;RPR=0;RUN=1;SAF=2;SAP=3.0103;SAR=2;SF=0;SRF=2;SRP=3.0103;SRR=2;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	0/1:-9.54798,0,-10.2941:8:4:4:132:141:4,4	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr20	32031208	.	C	A	50.52	.	AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X;DP=2;DPB=2;DPRA=0;EPP=3.0103;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=0;NS=1;NUMALT=1;ODDS=7.37776;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=67;QR=0;RO=0;RPL=2;RPP=7.35324;RPPR=0;RPR=0;RUN=1;SAF=1;SAP=3.0103;SAR=1;SF=17;SRF=0;SRP=0;SRR=0;TYPE=snp	GT:GL:DP:RO:AO:QA:QR	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	1/1:-6.25543,-0.60206,0:2:0:2:67:0	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr20	42743454	.	A	G	5997.56	.	AB=0.489324;ABP=3.56669;AC=18;AF=0.5;AN=34;AO=275;CIGAR=1X;DP=7596;DPB=562;DPRA=0;EPP=3.39722;EPPR=11.7873;GTI=0;LEN=1;MEANALT=2;MQM=41.5055;MQMR=41.7832;NS=1;NUMALT=1;ODDS=1585.37;PAIRED=0.978182;PAIREDR=0.961538;PAO=0;PQA=0;PQR=0;PRO=0;QA=10022;QR=10439;RO=286;RPL=131;RPP=4.34477;RPPR=3.04067;RPR=144;RUN=1;SAF=135;SAP=3.20771;SAR=140;SF=2,3,8,12,13,18,19,20,21,23,24,27,30,31,32,34,36;SRF=138;SRP=3.76956;SRR=148;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	0/1:-696.181,0,-732.825:562:286:275:10022:10439	0/1:-596.443,0,-673.307:492:260:232:8678:9541:260,232	.	.	.	.	1/1:-1397.46,-131.851,0:438:0:438:16272:0	.	.	.	0/1:-942.467,0,-934.696:724:356:367:13460:13349:356,367	0/1:-531.254,0,-521.831:412:206:206:7581:7555	.	.	.	.	0/1:-352.7,0,-316.267:256:122:134:4981:4539	0/1:-639.774,0,-708.582:529:275:254:9304:10062	0/1:-887.956,0,-744.022:633:292:340:12528:10870:292,340	0/1:-82.4176,0,-399.99:193:149:44:1634:5297:149,44	.	0/1:-696.319,0,-847.561:590:319:271:10137:11889	0/1:-302.01,0,-301.175:233:118:115:4297:4292:118,115	.	.	0/1:-592.844,0,-640.31:493:255:238:8629:9144:255,238	.	.	0/1:-529.488,0,-495.441:398:194:204:7532:7127	0/1:-357.339,0,-337.617:275:134:140:5108:4890	0/1:-594.731,0,-601.876:469:232:237:8592:8584	.	0/1:-561.21,0,-526.321:418:206:212:7962:7557	.	0/1:-593.237,0,-641.676:481:247:234:8588:9105
+chr20	42744587	.	G	C	199.53	.	AB=0.4;ABP=3.87889;AC=11;AF=0.5;AN=22;AO=4;CIGAR=1X;DP=215;DPB=10;DPRA=0;EPP=3.0103;EPPR=3.0103;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=42;NS=1;NUMALT=1;ODDS=13.2793;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=152;QR=228;RO=6;RPL=0;RPP=11.6962;RPPR=16.0391;RPR=4;RUN=1;SAF=2;SAP=3.0103;SAR=2;SF=2,12,18,19,20,21,23,24,32,34,36;SRF=3;SRP=3.0103;SRR=3;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	0/1:-10.5113,0,-17.0893:10:6:4:152:228	.	.	.	.	.	.	.	.	.	0/1:-37.7824,0,-56.461:40:24:16:581:796:24,16	.	.	.	.	.	0/1:-7.52218,0,-23.4791:13:9:4:128:312	0/1:-26.0583,0,-35.8307:23:13:10:378:489	0/1:-42.0282,0,-26.8251:28:12:16:577:400:12,16	0/1:-7.52718,0,-13.677:8:5:3:110:180:5,3	.	0/1:-56.6196,0,-21.0757:32:10:22:757:349	0/1:-10.9729,0,-10.5143:8:4:4:150:144:4,4	.	.	.	.	.	.	.	0/1:-31.9502,0,-25.6065:22:10:12:440:367	.	0/1:-25.4052,0,-6.62018:12:3:9:330:114	.	0/1:-19.7133,0,-27.2465:19:10:9:288:376
+chr20	42744802	.	C	T	217.14	.	AB=0.625;ABP=5.18177;AC=2;AF=0.5;AN=4;AO=10;CIGAR=1X;DP=42;DPB=16;DPRA=0;EPP=3.0103;EPPR=3.0103;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=42;NS=1;NUMALT=1;ODDS=20.6653;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=378;QR=220;RO=6;RPL=8;RPP=10.8276;RPPR=16.0391;RPR=2;RUN=1;SAF=5;SAP=3.0103;SAR=5;SF=11,30;SRF=3;SRP=3.0103;SRR=3;TYPE=snp	GT:GL:DP:RO:AO:QA:QR	.	.	.	.	.	.	.	.	.	.	.	0/1:-28.2353,0,-14.7043:16:6:10:378:220	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-28.4276,0,-38.0792:26:14:12:411:525	.	.	.	.	.	.
+chr20	42744945	.	G	A	14.43	.	AB=0.4;ABP=3.44459;AC=1;AF=0.5;AN=2;AO=2;CIGAR=1X;DP=5;DPB=5;DPRA=0;EPP=3.0103;EPPR=3.73412;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=42;NS=1;NUMALT=1;ODDS=3.28501;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=72;QR=112;RO=3;RPL=0;RPP=7.35324;RPPR=9.52472;RPR=2;RUN=1;SAF=1;SAP=3.0103;SAR=1;SF=35;SRF=2;SRP=3.73412;SRR=1;TYPE=snp	GT:GL:DP:RO:AO:QA:QR	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-5.13593,0,-8.58573:5:3:2:72:112	.
+chr20	42745033	.	G	A	251.43	.	AB=0.5;ABP=3.0103;AC=1;AF=0.5;AN=2;AO=12;CIGAR=1X;DP=24;DPB=24;DPRA=0;EPP=3.0103;EPPR=3.73412;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=42;NS=1;NUMALT=1;ODDS=57.8937;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=427;QR=455;RO=12;RPL=4;RPP=5.9056;RPPR=9.52472;RPR=8;RUN=1;SAF=6;SAP=3.0103;SAR=6;SF=35;SRF=6;SRP=3.0103;SRR=6;TYPE=snp	GT:GL:DP:RO:AO:QA:QR	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-30.1467,0,-32.4749:24:12:12:427:455	.
+chr20	42747247	.	C	T	3051.69	.	AB=0.475806;ABP=3.64073;AC=16;AF=0.5;AN=32;AO=59;CIGAR=1X;DP=4259;DPB=124;DPRA=0;EPP=19.2411;EPPR=3.04371;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=42;NS=1;NUMALT=1;ODDS=310.809;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=2143;QR=2457;RO=65;RPL=47;RPP=48.096;RPPR=27.3642;RPR=12;RUN=1;SAF=38;SAP=13.6468;SAR=21;SF=1,4,10,13,17,18,19,21,22,23,26,29,32,33,35,36;SRF=37;SRP=5.71629;SRR=28;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	0/1:-148.564,0,-175.681:124:65:59:2143:2457	.	.	0/1:-391.13,0,-535.288:363:206:157:5782:7438	.	.	.	.	.	0/1:-330.976,0,-387.904:278:146:131:4793:5443:146,131	.	.	0/1:-476.32,0,-357.149:332:146:185:6640:5260	.	.	.	0/1:-441.536,0,-453.123:351:177:173:6356:6440	0/1:-206.305,0,-216.42:170:85:84:2961:3076	0/1:-397.685,0,-336.175:290:136:154:5661:4891	.	0/1:-51.7249,0,-283.886:137:106:31:1067:3744:106,31	0/1:-149.549,0,-196.617:144:80:64:2247:2757	0/1:-512.959,0,-520.606:405:203:202:7364:7413	.	.	0/1:-383.776,0,-451.908:346:185:159:5644:6394	.	.	0/1:-475.709,0,-459.77:395:193:199:6853:6649	.	.	0/1:-335.252,0,-359.594:271:137:134:4817:5091	0/1:-299.39,0,-325.604:247:129:118:4313:4622	.	0/1:-203.093,0,-181.396:156:74:81:2879:2621	0/1:-314.387,0,-310.617:250:123:126:4513:4483
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+chr20	42814955	.	A	C	1497.42	.	AB=0.539823;ABP=4.56684;AC=1;AF=0.5;AN=2;AO=61;CIGAR=1X;DP=113;DPB=113;DPRA=0;EPP=3.90025;EPPR=11.1951;GTI=0;LEN=1;MEANALT=1;MQM=41.9672;MQMR=41.3077;NS=1;NUMALT=1;ODDS=254.704;PAIRED=1;PAIREDR=0.961538;PAO=0;PQA=0;PQR=0;PRO=0;QA=2281;QR=1873;RO=52;RPL=12;RPP=51.7438;RPPR=51.2838;RPR=49;RUN=1;SAF=45;SAP=32.9481;SAR=16;SF=8;SRF=42;SRP=45.7716;SRR=10;TYPE=snp	GT:GL:DP:RO:AO:QA:QR	.	.	.	.	.	.	.	.	0/1:-164.28,0,-127.209:113:52:61:2281:1873	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr20	42815190	.	G	A	19049.39	.	AB=0;ABP=0;AC=65;AF=1;AN=74;AO=757;CIGAR=1X;DP=26960;DPB=757;DPRA=0;EPP=30.0002;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=41.9062;MQMR=0;NS=1;NUMALT=1;ODDS=1054.03;PAIRED=0.988111;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=27828;QR=0;RO=0;RPL=361;RPP=6.52424;RPPR=0;RPR=396;RUN=1;SAF=331;SAP=28.8987;SAR=426;SF=0,1,2,3,4,5,6,7,8,9,10,11,12,13,14,15,16,17,18,19,20,21,22,23,24,25,26,27,28,29,30,31,32,33,34,35,36;SRF=0;SRP=0;SRR=0;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	1/1:-2410.48,-227.88,0:757:0:757:27828:0:0,757	1/1:-946.952,-89.4059,0:297:0:297:10931:0	1/1:-2410.58,-234.268,0:784:1:782:27844:16	1/1:-2209.64,-211.63,0:708:1:707:25566:15:1,707	1/1:-3020.95,-288.439,0:966:1:962:34970:16	0/1:-1026.23,0,-1317.26:909:499:410:15016:18380:499,410	1/1:-1997.41,-190.552,0:634:0:633:23078:0:0,633	1/1:-3709.67,-354.312,0:1178:0:1177:42870:0	1/1:-2087.37,-199.583,0:663:0:663:24212:0	1/1:-2290.09,-219.752,0:732:0:730:26490:0:0,730	1/1:-2398.78,-228.339,0:767:1:762:27792:15:1,762	1/1:-2761.28,-260.747,0:900:4:894:32031:109	0/1:-1484.35,0,-1445.13:1145:565:579:21154:20713:565,579	1/1:-2064.84,-199.884,0:665:0:664:23965:0	1/1:-2016.44,-189.95,0:632:0:631:23299:0	1/1:-2722.91,-261.896,0:871:0:870:31665:0	1/1:-2231.03,-210.42,0:700:0:699:25795:0:0,699	0/1:-1106.52,0,-1282.37:935:488:445:16087:18079	1/1:-1828.12,-173.995,0:579:0:578:21169:0	0/1:-975.16,0,-1068.41:800:414:386:14119:15133	1/1:-3178.44,-301.376,0:1020:2:1016:36932:57:2,1016	0/1:-650.526,0,-159.319:318:79:239:8596:2940:79,239	1/1:-1093.95,-106.866,0:355:0:355:12598:0	1/1:-2869.99,-272.733,0:906:0:906:33114:0	1/1:-1273.79,-121.014,0:402:0:402:14683:0:0,402	0/1:-1115.77,0,-1291.54:955:502:451:16274:18254:502,451	0/1:-1028.02,0,-1071.86:850:433:416:14881:15369	1/1:-2646.13,-253.918,0:855:2:851:30692:32:2,851	1/1:-1383.11,-133.657,0:445:0:444:16010:0	1/1:-2961.12,-287.794,0:962:1:961:34283:18	1/1:-1856.37,-169.817,0:594:5:589:21517:154	0/1:-527.637,0,-736.398:498:280:218:7813:10257	1/1:-2212.97,-212.197,0:713:2:710:25653:45	1/1:-1727.53,-164.972,0:558:1:553:19941:20	0/1:-893.077,0,-852.121:686:334:351:12721:12222	1/1:-1420.08,-129.493,0:453:2:451:16475:75	1/1:-2404,-230.89,0:768:0:767:27865:0
+chr20	61039958	.	T	C	661.35	.	AB=0;ABP=0;AC=44;AF=1;AN=62;AO=13;CIGAR=1X;DP=1196;DPB=13;DPRA=0;EPP=11.1951;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=0;NS=1;NUMALT=1;ODDS=22.627;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=496;QR=0;RO=0;RPL=3;RPP=11.1951;RPPR=0;RPR=10;RUN=1;SAF=6;SAP=3.17734;SAR=7;SF=1,2,3,4,5,6,7,8,9,10,11,12,13,14,15,16,17,19,20,21,22,23,24,25,26,28,29,30,33,35,36;SRF=0;SRP=0;SRR=0;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	1/1:-43.236,-3.91339,0:13:0:13:496:0	0/1:-41.3529,0,-57.4039:45:24:21:649:815	0/1:-55.8026,0,-77.8718:51:29:22:815:1072:29,22	0/1:-73.5947,0,-62.4979:54:24:29:1028:904	0/1:-77.9457,0,-78.4677:63:30:32:1108:1119:30,32	0/1:-34.9532,0,-54.9003:35:21:14:520:749:21,14	1/1:-151.015,-14.7505,0:50:0:49:1777:0	0/1:-41.4469,0,-50.8136:35:19:16:596:703	1/1:-98.0945,-9.0309,0:30:0:30:1129:0:0,30	1/1:-102.083,-8.83568,0:34:1:33:1193:14:1,33	0/1:-53.967,0,-33.0398:34:14:20:735:494	0/1:-75.3964,0,-67.8722:58:28:30:1066:1004:28,30	0/1:-31.3633,0,-76.2407:43:29:14:504:1026	1/1:-172.442,-16.2556,0:54:0:54:1983:0	1/1:-154.358,-15.3525,0:51:0:51:1772:0	1/1:-98.7464,-9.63296,0:32:0:32:1132:0:0,32	0/1:-101.148,0,-75.6226:70:31:39:1419:1109	.	1/1:-115.145,-11.1381,0:37:0:37:1317:0	0/1:-83.3737,0,-40.3941:51:18:33:1129:636:18,33	1/1:-41.6898,-0.860971,0:15:1:14:518:38:1,14	1/1:-23.809,-2.40824,0:8:0:8:269:0	0/1:-42.8057,0,-30.1462:30:12:18:592:448	1/1:-50.029,-4.81648,0:17:0:16:573:0:0,16	0/1:-59.5878,0,-96.503:63:37:26:899:1330:37,26	0/1:-45.0861,0,-34.5207:31:14:17:622:501	.	1/1:-68.7824,-6.32163,0:21:0:21:790:0	0/1:-55.4808,0,-71.8711:52:28:24:813:1001	0/1:-50.2704,0,-32.2581:32:13:19:683:478	.	.	0/1:-41.3125,0,-51.397:36:20:16:599:712	.	0/1:-27.8211,0,-9.23068:14:4:10:364:151	1/1:-110.405,-11.1381,0:37:0:37:1282:0
+chr20	61040453	.	C	G	4351.50	.	AB=0.468085;ABP=5.08937;AC=38;AF=0.5;AN=58;AO=110;CIGAR=1X;DP=7793;DPB=235;DPRA=0;EPP=10.9066;EPPR=3.86152;GTI=0;LEN=1;MEANALT=1;MQM=41.6545;MQMR=42;NS=1;NUMALT=1;ODDS=612.401;PAIRED=0.981818;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=4113;QR=4695;RO=125;RPL=22;RPP=89.0006;RPPR=41.3846;RPR=88;RUN=1;SAF=67;SAP=14.3809;SAR=43;SF=0,1,2,3,4,5,7,8,9,10,11,13,14,15,16,17,18,20,21,22,24,25,26,29,30,32,33,34,36;SRF=73;SRP=10.6713;SRR=52;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	0/1:-283.847,0,-335.995:235:125:110:4113:4695:125,110	0/1:-130.958,0,-107.992:89:41:48:1826:1553	0/1:-354.481,0,-362.694:279:140:139:5108:5185	0/1:-362.396,0,-408.887:298:157:141:5229:5788:157,141	0/1:-507.126,0,-518.702:389:196:193:7243:7350	0/1:-393.69,0,-496.896:338:185:153:5768:6917:185,153	.	0/1:-513.277,0,-679.91:459:253:206:7651:9473	0/1:-235.877,0,-372.243:232:137:95:3601:5142	1/1:-960.389,-88.5028,0:294:0:294:11164:0:0,294	0/1:-386.162,0,-319.693:272:127:145:5416:4657:127,145	0/1:-349.632,0,-485.303:323:182:141:5162:6733	.	0/1:-365.995,0,-403.984:301:156:143:5298:5725	1/1:-734.839,-67.7318,0:225:0:225:8513:0	0/1:-372.07,0,-380.858:291:145:145:5364:5449	0/1:-377.863,0,-372.01:290:144:146:5450:5304:144,146	0/1:-350.107,0,-512.469:328:189:139:5210:7071	1/1:-475.123,-43.9504,0:146:0:146:5503:0	.	0/1:-321.969,0,-337.515:253:129:123:4621:4775:129,123	1/1:-356.142,-33.1133,0:110:0:110:4130:0:0,110	1/1:-345.327,-31.9092,0:106:0:106:3992:0	.	1/1:-411.119,-37.9298,0:127:0:126:4759:0:0,126	0/1:-413.627,0,-642.517:403:237:165:6187:8813:237,165	1/1:-1022.6,-97.2327,0:324:0:323:11918:0	.	.	0/1:-507.612,0,-508.578:392:195:197:7245:7228	1/1:-696.589,-60.247,0:223:3:219:8133:83	.	0/1:-287.704,0,-279.763:217:109:107:4087:4027	0/1:-433.254,0,-311.291:281:122:159:6010:4571	1/1:-810.368,-74.6554,0:248:0:248:9391:0	.	0/1:-399.987,0,-425.381:320:166:154:5763:6057
+chr20	61040951	.	C	T	7676.94	.	AB=0.529545;ABP=6.34647;AC=38;AF=0.5;AN=58;AO=233;CIGAR=1X;DP=12891;DPB=440;DPRA=0;EPP=7.12025;EPPR=3.52432;GTI=0;LEN=1;MEANALT=1;MQM=41.8283;MQMR=41.9903;NS=1;NUMALT=1;ODDS=1204.47;PAIRED=1;PAIREDR=0.980676;PAO=0;PQA=0;PQR=0;PRO=0;QA=8709;QR=7672;RO=207;RPL=121;RPP=3.76519;RPPR=4.78314;RPR=112;RUN=1;SAF=111;SAP=4.13797;SAR=122;SF=0,1,2,3,4,5,7,8,9,10,11,13,14,15,16,17,18,20,21,22,24,25,26,29,30,32,33,34,36;SRF=104;SRP=3.02079;SRR=103;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	0/1:-618.107,0,-530.845:440:207:233:8709:7672:207,233	0/1:-283.608,0,-215.208:188:83:105:3937:3148	0/1:-626.373,0,-676.429:504:263:241:9005:9580	0/1:-703.083,0,-579.26:487:226:261:9840:8426:226,261	0/1:-730.206,0,-787.664:580:296:283:10513:11135	0/1:-720.795,0,-759.781:569:290:277:10390:10844:290,277	.	0/1:-816.514,0,-856.466:645:322:320:11749:12158	0/1:-528.088,0,-608.027:434:230:203:7627:8546	1/1:-1450.55,-135.765,0:453:0:451:16821:0:0,451	0/1:-647.389,0,-621.519:488:237:250:9268:8895:237,250	0/1:-740.22,0,-562.832:514:229:285:10366:8296	.	0/1:-561.621,0,-633.507:470:245:224:8207:8972	1/1:-1306.68,-120.713,0:401:0:401:15121:0	0/1:-507.577,0,-724.779:484:278:203:7563:10161	0/1:-603.794,0,-641.168:469:241:228:8636:9061:241,228	0/1:-699.459,0,-816.321:572:305:267:10098:11504	1/1:-900.046,-82.6948,0:280:1:278:10435:15	.	0/1:-668.87,0,-587.843:478:225:253:9450:8488:225,253	1/1:-554.073,-52.3792,0:174:0:174:6407:0:0,174	1/1:-553.775,-52.0782,0:173:0:173:6404:0	.	1/1:-695.828,-63.8184,0:213:0:212:8076:0:0,212	0/1:-921.435,0,-730.297:638:289:348:12959:10708:289,348	1/1:-1636.66,-159.847,0:535:0:531:19016:0	.	.	0/1:-826.653,0,-771.892:637:315:320:11772:11151	1/1:-1313.86,-122.82,0:409:0:408:15220:0	.	0/1:-588.85,0,-591.701:451:226:224:8382:8413	0/1:-562.065,0,-502.039:411:194:217:8003:7237	1/1:-1189.37,-107.959,0:371:1:370:13836:39	.	0/1:-531.899,0,-566.597:423:216:207:7675:8034
+chr20	61048549	.	G	A	5929.83	.	AB=0.475921;ABP=4.78808;AC=38;AF=0.5;AN=58;AO=168;CIGAR=1X;DP=9706;DPB=353;DPRA=0;EPP=3.47562;EPPR=8.18662;GTI=0;LEN=1;MEANALT=1;MQM=41.4762;MQMR=42;NS=1;NUMALT=1;ODDS=942.445;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=6103;QR=6686;RO=185;RPL=98;RPP=13.1438;RPPR=17.389;RPR=70;RUN=1;SAF=75;SAP=7.19814;SAR=93;SF=0,1,2,3,5,6,8,10,11,12,13,15,16,17,18,19,20,21,22,24,25,26,28,30,32,33,34,35,36;SRF=83;SRP=7.24761;SRR=102;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	0/1:-417.958,0,-476.461:353:185:168:6103:6686:185,168	0/1:-183.211,0,-193.327:148:75:73:2652:2729	1/1:-1086.62,-109.274,0:365:0:363:12566:0	1/1:-1029.84,-99.0001,0:338:2:334:11997:24:2,334	.	0/1:-691.889,0,-585.565:509:239:269:9901:8501:239,269	0/1:-313.049,0,-371.2:272:145:127:4545:5197:145,127	.	0/1:-457.853,0,-407.45:344:163:181:6539:5878	.	0/1:-375.648,0,-414.337:316:166:149:5439:5899:166,149	1/1:-1252.02,-123.121,0:410:0:409:14483:0	0/1:-597.864,0,-699.67:523:276:246:8854:9903:276,246	1/1:-1219.35,-120.412,0:401:0:400:14042:0	.	0/1:-424.623,0,-586.039:413:234:179:6396:8261	0/1:-459.119,0,-362.351:325:148:177:6428:5283:148,177	0/1:-525.452,0,-541.544:428:220:208:7591:7727	1/1:-660.485,-57.6706,0:219:3:215:7723:90	0/1:-489.233,0,-571.339:429:228:200:7115:8111	0/1:-588.826,0,-566.592:461:227:234:8419:8174:227,234	0/1:-284.71,0,-79.269:144:39:104:3781:1401:39,104	0/1:-165.131,0,-197.421:147:77:68:2411:2767	.	0/1:-210.483,0,-228.984:174:91:83:3025:3239:91,83	0/1:-676.155,0,-754.219:579:298:281:9863:10679:298,281	1/1:-1231.15,-125.174,0:425:1:419:14209:14	.	1/1:-740.788,-73.4513,0:244:0:244:8551:0	.	1/1:-885.555,-84.8905,0:282:0:282:10269:0	.	0/1:-471.569,0,-338.935:323:140:183:6580:5001	0/1:-393.843,0,-346.773:300:141:158:5614:5019	1/1:-1077.75,-102.651,0:342:0:341:12445:0	0/1:-198.601,0,-189.855:153:75:78:2839:2701	0/1:-358.692,0,-483.49:339:191:147:5345:6804
+chr20	61050223	.	C	A	20.82	.	AB=0.666667;ABP=3.73412;AC=1;AF=0.5;AN=2;AO=2;CIGAR=1X;DP=3;DPB=3;DPRA=0;EPP=3.0103;EPPR=5.18177;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=42;NS=1;NUMALT=1;ODDS=1.33013;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=64;QR=38;RO=1;RPL=2;RPP=7.35324;RPPR=5.18177;RPR=0;RUN=1;SAF=1;SAP=3.0103;SAR=1;SF=11;SRF=0;SRP=5.18177;SRR=1;TYPE=snp	GT:GL:DP:RO:AO:QA:QR	.	.	.	.	.	.	.	.	.	.	.	0/1:-5.02846,0,-2.75139:3:1:2:64:38	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr20	61050238	.	T	C	17.49	.	AB=0.5;ABP=3.0103;AC=1;AF=0.5;AN=2;AO=2;CIGAR=1X;DP=4;DPB=4;DPRA=0;EPP=3.0103;EPPR=3.0103;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=42;NS=1;NUMALT=1;ODDS=3.99906;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=71;QR=75;RO=2;RPL=2;RPP=7.35324;RPPR=7.35324;RPR=0;RUN=1;SAF=1;SAP=3.0103;SAR=1;SF=9;SRF=1;SRP=3.0103;SRR=1;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	0/1:-5.36686,0,-5.66929:4:2:2:71:75:2,2	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr21	35742799	.	A	G	2657.03	.	AB=0.515284;ABP=3.47494;AC=2;AF=0.5;AN=4;AO=118;CIGAR=1X;DP=411;DPB=229;DPRA=0;EPP=26.8597;EPPR=8.06391;GTI=0;LEN=1;MEANALT=2;MQM=41.9661;MQMR=41.9818;NS=1;NUMALT=1;ODDS=618.038;PAIRED=0.991525;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=4294;QR=4088;RO=110;RPL=39;RPP=32.454;RPPR=34.5954;RPR=79;RUN=1;SAF=80;SAP=35.472;SAR=38;SF=12,32;SRF=82;SRP=60.5741;SRR=28;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-303.134,0,-284.766:229:110:118:4294:4088:110,118	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-258.048,0,-205.895:182:83:99:3626:3005	.	.	.	.
+chr21	35821821	.	T	C	7773.18	.	AB=0;ABP=0;AC=49;AF=1;AN=62;AO=369;CIGAR=1X;DP=11169;DPB=369;DPRA=0;EPP=5.13469;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=41.9946;MQMR=0;NS=1;NUMALT=1;ODDS=516.148;PAIRED=0.99729;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=13497;QR=0;RO=0;RPL=229;RPP=49.6234;RPPR=0;RPR=140;RUN=1;SAF=130;SAP=72.927;SAR=239;SF=0,2,3,4,5,6,7,8,9,10,13,14,15,16,17,19,20,21,22,24,25,26,27,28,30,31,32,33,34,35,36;SRF=0;SRP=0;SRR=0;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	1/1:-1171.68,-111.08,0:369:0:369:13497:0:0,369	.	0/1:-557.577,0,-443.907:408:182:222:7832:6554	0/1:-465.312,0,-465.684:364:182:182:6624:6648:182,182	1/1:-1406.18,-135.162,0:449:0:449:16229:0	0/1:-624.369,0,-594.426:474:230:244:8860:8588:230,244	1/1:-808.576,-77.3647,0:257:0:257:9326:0:0,257	0/1:-500.375,0,-623.619:453:244:207:7350:8775	1/1:-1009.6,-96.6306,0:321:0:321:11632:0	1/1:-1028.55,-98.7378,0:329:0:328:11847:0:0,328	1/1:-1001.54,-94.5294,0:319:1:318:11579:15:1,318	.	.	1/1:-1354.03,-129.506,0:436:1:434:15617:16	1/1:-975.111,-93.3193,0:310:0:310:11252:0	0/1:-494.352,0,-555.597:412:212:198:7139:7900	0/1:-481.778,0,-529.494:394:201:191:6939:7494:201,191	1/1:-1360.26,-130.948,0:435:0:435:15715:0	.	0/1:-441.191,0,-504.372:386:199:186:6420:7192	0/1:-655.931,0,-676.057:524:266:258:9394:9631:266,258	1/1:-594.505,-58.0988,0:193:0:193:6832:0:0,193	1/1:-602.436,-59.6039,0:198:0:198:6939:0	.	1/1:-554.914,-53.8844,0:179:0:179:6392:0:0,179	1/1:-1750.31,-170.243,0:571:1:569:20235:15:1,569	0/1:-444.657,0,-601.734:426:239:185:6583:8432	0/1:-536.862,0,-544.489:434:215:217:7699:7790:215,217	0/1:-327.607,0,-383.8:291:152:139:4793:5448	.	1/1:-1004.2,-98.4368,0:327:0:327:11557:0	1/1:-848.334,-83.0843,0:276:0:276:9768:0	0/1:-462.42,0,-599.189:423:230:192:6777:8423	0/1:-321.261,0,-488.01:315:180:133:4815:6740	1/1:-1059.54,-102.049,0:339:0:339:12217:0	1/1:-537.998,-52.6803,0:175:0:175:6189:0	1/1:-1179.12,-113.494,0:382:1:381:13612:15
+chr22	19867744	.	G	A	5075.84	.	AB=0.577586;ABP=21.2057;AC=1;AF=0.5;AN=2;AO=201;CIGAR=1X;DP=348;DPB=348;DPRA=0;EPP=12.0959;EPPR=8.34296;GTI=0;LEN=1;MEANALT=1;MQM=41.5771;MQMR=41.8231;NS=1;NUMALT=1;ODDS=779.11;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=7228;QR=5247;RO=147;RPL=106;RPP=4.3175;RPPR=25.4784;RPR=95;RUN=1;SAF=119;SAP=17.8001;SAR=82;SF=28;SRF=86;SRP=12.2428;SRR=61;TYPE=snp	GT:GL:DP:RO:AO:QA:QR	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-519.042,0,-350.812:348:147:201:7228:5247	.	.	.	.	.	.	.	.
+chr22	19867771	.	C	T	8140.19	.	AB=0;ABP=0;AC=12;AF=1;AN=20;AO=370;CIGAR=1X;DP=5395;DPB=374;DPRA=0;EPP=13.3629;EPPR=3.73412;GTI=0;LEN=1;MEANALT=2;MQM=41.8432;MQMR=36;NS=1;NUMALT=1;ODDS=500.571;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=13275;QR=45;RO=3;RPL=152;RPP=28.575;RPPR=3.73412;RPR=218;RUN=1;SAF=244;SAP=84.7281;SAR=126;SF=6,9,11,12,18,23,25,29,32,35;SRF=3;SRP=9.52472;SRR=0;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	1/1:-1148.33,-108.289,0:374:3:370:13275:45:3,370	.	.	0/1:-557.739,0,-646.973:472:245:225:8053:9103:245,225	.	0/1:-737.04,0,-689.587:575:271:301:10483:9961	0/1:-851.698,0,-1042.46:746:401:343:12422:14688:401,343	.	.	.	.	.	0/1:-424.163,0,-505.893:367:194:172:6141:7149	.	.	.	.	0/1:-796.981,0,-851.95:642:327:313:11454:12089	.	1/1:-2126.69,-202.311,0:714:5:703:24616:123:5,703	.	.	.	0/1:-786.566,0,-1006.56:739:397:338:11701:14211	.	.	0/1:-535.822,0,-770.146:511:289:222:7935:10669	.	.	0/1:-291.02,0,-360.061:255:136:119:4237:5040	.
+chr22	19868218	.	A	G	9249.12	.	AB=0;ABP=0;AC=52;AF=1;AN=64;AO=179;CIGAR=1X;DP=12882;DPB=179;DPRA=0;EPP=3.60473;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=41.1564;MQMR=0;NS=1;NUMALT=1;ODDS=252.752;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=6504;QR=0;RO=0;RPL=136;RPP=107.932;RPPR=0;RPR=43;RUN=1;SAF=92;SAP=3.31358;SAR=87;SF=1,2,3,4,5,6,8,9,10,11,12,13,16,17,18,19,20,21,22,23,24,25,26,27,28,29,30,31,32,34,35,36;SRF=0;SRP=0;SRR=0;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	1/1:-557.868,-53.8844,0:179:0:179:6504:0	1/1:-1327.55,-129.443,0:430:0:430:15397:0	0/1:-591.663,0,-601.435:475:240:235:8547:8714:240,235	0/1:-730.158,0,-682.147:558:271:287:10347:9848	0/1:-724.552,0,-516.374:487:208:279:10056:7648:208,279	1/1:-1087,-103.855,0:345:0:345:12592:0:0,345	.	1/1:-1176.44,-112.886,0:375:0:375:13615:0	0/1:-623.767,0,-384.762:400:158:242:8756:5881:158,242	1/1:-1447.21,-139.377,0:464:0:463:16912:0:0,463	1/1:-1392.14,-135.765,0:451:0:451:16105:0	1/1:-1870.66,-179.715,0:597:0:597:21750:0:0,597	0/1:-420.381,0,-539.619:390:214:175:6276:7642	.	.	1/1:-1402,-130.906,0:447:1:446:16298:38:1,446	1/1:-1635.25,-156.536,0:520:0:520:18916:0	1/1:-816.481,-78.8699,0:262:0:262:9539:0	0/1:-592.017,0,-741.09:526:287:239:8724:10391	1/1:-1769.2,-167.975,0:558:0:558:20491:0:0,558	1/1:-541.223,-52.0782,0:173:0:173:6213:0:0,173	1/1:-513.944,-49.67,0:165:0:165:5934:0	0/1:-642.869,0,-778.304:552:296:256:9343:10934	1/1:-642.77,-61.1091,0:203:0:203:7444:0:0,203	1/1:-1726.46,-167.674,0:557:0:557:20034:0:0,557	0/1:-518.32,0,-661.21:489:265:224:7748:9317	0/1:-600.729,0,-629.035:488:245:243:8672:8961:245,243	1/1:-803.615,-80.074,0:266:0:266:9386:0	1/1:-1608.49,-157.091,0:537:2:535:18754:49	0/1:-448.834,0,-519.199:377:198:179:6514:7319	0/1:-282.156,0,-301.872:233:119:114:4077:4278	1/1:-1330.16,-127.637,0:424:0:424:15442:0	.	0/1:-464.297,0,-383.527:333:154:179:6521:5652	1/1:-765.38,-71.9462,0:239:0:239:8810:0	1/1:-1187.93,-114.993,0:382:0:382:13860:0
+chr22	19868255	.	AGGGGGGCCA	AGGGGGCCA	3880.62	.	AB=0;ABP=0;AC=12;AF=1;AN=20;AO=228;CIGAR=1M1D8M;DP=2802;DPB=207;DPRA=0;EPP=3.0484;EPPR=0;GTI=0;LEN=1;MEANALT=3;MQM=41.307;MQMR=0;NS=1;NUMALT=1;ODDS=320.68;PAIRED=0.969298;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=7899;QR=0;RO=0;RPL=170;RPP=122.479;RPPR=0;RPR=58;RUN=1;SAF=67;SAP=87.1644;SAR=161;SF=6,9,11,12,18,23,25,29,32,35;SRF=0;SRP=0;SRR=0;TYPE=del	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	1/1:-686.732,-68.6348,0:230:0:228:7899:0:0,228	.	.	0/1:-360.828,0,-210.591:240:91:144:4999:3237:91,144	.	0/1:.,.,-306.968:321:146:165:5673:5041	0/1:-457.97,0,-467.481:381:185:189:6586:6670:185,189	.	.	.	.	.	0/1:.,.,-177.207:161:82:79:2673:2891	.	.	.	.	0/1:.,.,-424.158:361:187:169:5959:6661	.	1/1:-929.336,-90.378,0:319:1:310:10726:37:1,310	.	.	.	0/1:.,.,-361.979:360:167:180:5956:5840	.	.	0/1:.,.,-342.743:277:141:127:4413:5086	.	.	0/1:.,.,-154.89:152:68:81:2879:2499	.
+chr22	19870831	.	C	T	2110.12	.	AB=0;ABP=0;AC=24;AF=1;AN=40;AO=42;CIGAR=1X;DP=2913;DPB=42;DPRA=0;EPP=3.21711;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=41.5;MQMR=0;NS=1;NUMALT=1;ODDS=62.8295;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1457;QR=0;RO=0;RPL=7;RPP=43.5445;RPPR=0;RPR=35;RUN=1;SAF=27;SAP=10.4553;SAR=15;SF=1,2,3,4,8,10,11,16,17,18,19,20,21,22,24,27,29,32,35,36;SRF=0;SRP=0;SRR=0;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	1/1:-126.57,-12.6433,0:42:0:42:1457:0	0/1:-256.656,0,-147.064:159:63:96:3547:2241	0/1:-219.097,0,-171.723:160:70:89:3146:2528:70,89	0/1:-231.069,0,-218.714:179:87:92:3280:3139	.	.	.	0/1:-162.485,0,-82.5502:99:35:64:2230:1293	.	1/1:-408.261,-37.9809,0:132:1:130:4725:16:1,130	0/1:-309.697,0,-241.784:228:104:122:4352:3590	.	.	.	.	0/1:-129.676,0,-235.247:146:91:54:2002:3231:91,54	1/1:-561.279,-53.4551,0:183:1:181:6508:15	0/1:-121.665,0,-143.089:103:54:49:1758:2003	0/1:-204.518,0,-287.772:197:112:85:3047:4008	0/1:-330.127,0,-144.207:191:64:126:4475:2323:64,126	0/1:-103.335,0,-105.047:83:40:43:1466:1497:40,43	0/1:-89.2541,0,-94.13:75:36:38:1279:1340	.	1/1:-202.458,-13.4609,0:68:2:66:2415:77:2,66	.	.	0/1:-269.08,0,-266.782:221:108:113:3857:3853:108,113	.	0/1:-325.215,0,-325.792:265:132:131:4664:4689	.	.	0/1:-216.433,0,-165.302:153:67:86:3023:2433	.	.	0/1:-97.2377,0,-81.5611:70:33:37:1364:1178	0/1:-183.327,0,-216.027:159:83:76:2661:3056
+chr22	19870995	.	CAGAGAGG	CAGAGG	3059.05	.	AB=0.534694;ABP=5.57175;AC=1;AF=0.5;AN=2;AO=131;CIGAR=1M2D5M;DP=245;DPB=226.5;DPRA=0;EPP=30.8748;EPPR=8.98702;GTI=0;LEN=2;MEANALT=8;MQM=41.6336;MQMR=41.4476;NS=1;NUMALT=1;ODDS=508.563;PAIRED=1;PAIREDR=0.980952;PAO=21.5;PQA=716;PQR=436;PRO=13.5;QA=4382;QR=3696;RO=105;RPL=75;RPP=8.99428;RPPR=22.8844;RPR=56;RUN=1;SAF=64;SAP=3.15949;SAR=67;SF=2;SRF=42;SRP=12.1305;SRR=63;TYPE=del	GT:GL:DP:RO:AO:QA:QR	.	.	0/1:-316.705,0,-231.603:245:105:131:4382:3696	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr22	19882976	.	G	T	1779.49	.	AB=0.525547;ABP=3.78696;AC=1;AF=0.5;AN=2;AO=72;CIGAR=1X;DP=137;DPB=137;DPRA=0;EPP=3.0103;EPPR=3.31097;GTI=0;LEN=1;MEANALT=1;MQM=41.5;MQMR=41.6308;NS=1;NUMALT=1;ODDS=348.957;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=2628;QR=2312;RO=65;RPL=26;RPP=15.074;RPPR=12.665;RPR=46;RUN=1;SAF=32;SAP=4.9405;SAR=40;SF=28;SRF=43;SRP=17.7429;SRR=22;TYPE=snp	GT:GL:DP:RO:AO:QA:QR	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-185.674,0,-160.281:137:65:72:2628:2312	.	.	.	.	.	.	.	.
+chr22	19882984	.	T	G	2788.55	.	AB=0.5;ABP=3.0103;AC=15;AF=0.5;AN=24;AO=96;CIGAR=1X;DP=1983;DPB=192;DPRA=0;EPP=7.44372;EPPR=4.13032;GTI=0;LEN=1;MEANALT=2;MQM=41.9792;MQMR=41.5579;NS=1;NUMALT=1;ODDS=520.796;PAIRED=1;PAIREDR=0.978947;PAO=0;PQA=0;PQR=0;PRO=0;QA=3361;QR=3534;RO=95;RPL=35;RPP=18.3011;RPPR=3.03316;RPR=61;RUN=1;SAF=50;SAP=3.37221;SAR=46;SF=3,6,9,14,18,19,20,28,33,34,35,36;SRF=54;SRP=6.87324;SRR=41;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	0/1:-234.698,0,-246.752:192:95:96:3361:3534:95,96	.	.	1/1:-405.187,-38.8329,0:129:0:129:4667:0:0,129	.	.	0/1:-200.617,0,-232.808:168:89:79:2893:3291:89,79	.	.	.	.	0/1:-201.393,0,-253.893:176:95:81:2927:3551	.	.	.	0/1:-106.303,0,-156.64:101:58:43:1574:2160	1/1:-603.126,-52.4286,0:195:2:193:7041:68	1/1:-854.922,-82.4822,0:274:0:274:9913:0:0,274	.	.	.	.	.	.	.	0/1:-174.374,0,-191.601:145:73:71:2502:2741	.	.	.	.	0/1:-230.31,0,-199.639:169:79:89:3237:2888	0/1:-116.671,0,-218.737:130:80:50:1786:2981	0/1:-90.2297,0,-148.287:92:55:37:1369:2031	0/1:-222.947,0,-317.688:212:119:93:3293:4411
+chr22	19885548	.	G	T	706.14	.	AB=0.363636;ABP=8.34028;AC=15;AF=0.5;AN=24;AO=12;CIGAR=1X;DP=516;DPB=33;DPRA=0;EPP=3.73412;EPPR=3.94093;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=42;NS=1;NUMALT=1;ODDS=56.7033;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=459;QR=764;RO=21;RPL=5;RPP=3.73412;RPPR=8.07707;RPR=7;RUN=1;SAF=6;SAP=3.0103;SAR=6;SF=3,6,9,14,18,19,20,28,33,34,35,36;SRF=10;SRP=3.1137;SRR=11;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	0/1:-30.0839,0,-56.7503:33:21:12:459:764:21,12	.	.	1/1:-126.448,-12.0412,0:40:0:40:1453:0:0,40	.	.	0/1:-102.739,0,-60.4148:65:26:39:1421:915:26,39	.	.	.	.	0/1:-16.2271,0,-43.2532:24:17:7:267:604	.	.	.	0/1:-16.6013,0,-38.2539:22:15:7:264:512	1/1:-174.13,-16.8577,0:57:0:56:2003:0	1/1:-212.566,-19.8725,0:70:1:69:2473:12:1,69	.	.	.	.	.	.	.	0/1:-37.0597,0,-57.1664:39:23:16:555:787	.	.	.	.	0/1:-36.1617,0,-83.8796:48:32:16:581:1128	0/1:-77.4498,0,-29.7879:43:14:29:1037:487	0/1:-22.2357,0,-14.8315:15:6:9:303:218	0/1:-66.0781,0,-84.215:60:33:27:965:1172
+chr22	19898886	.	C	T	4994.95	.	AB=0.459283;ABP=7.43105;AC=10;AF=0.5;AN=18;AO=141;CIGAR=1X;DP=3461;DPB=307;DPRA=0;EPP=4.25774;EPPR=4.60271;GTI=0;LEN=1;MEANALT=2;MQM=41.9858;MQMR=41.9879;NS=1;NUMALT=1;ODDS=779.244;PAIRED=0.992908;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=5252;QR=6101;RO=165;RPL=20;RPP=160.111;RPPR=171.056;RPR=121;RUN=1;SAF=79;SAP=7.46105;SAR=62;SF=0,4,5,7,15,20,23,27,30;SRF=87;SRP=4.0763;SRR=78;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	0/1:-363.545,0,-436.73:307:165:141:5252:6101:165,141	.	.	.	0/1:-396.911,0,-503.85:349:190:159:5798:7028	0/1:-566.35,0,-657.61:474:251:223:8165:9228:251,223	.	0/1:-510.861,0,-663.964:465:255:210:7535:9297	.	.	.	.	.	.	.	1/1:-1043.74,-98.9188,0:347:2:342:12092:52	.	.	.	.	0/1:-539.958,0,-445.444:385:178:206:7572:6469:178,206	.	.	0/1:-470.268,0,-518.593:385:199:185:6750:7311	.	.	.	0/1:-578.041,0,-616.53:469:238:230:8292:8728:238,230	.	.	0/1:-320.42,0,-378.58:280:148:131:4659:5323	.	.	.	.	.	.
+chr22	19902718	.	ATG	AG	2423.90	.	AB=0.546392;ABP=6.63688;AC=1;AF=0.5;AN=2;AO=106;CIGAR=1M1D1M;DP=194;DPB=163.333;DPRA=0;EPP=3.09224;EPPR=3.23494;GTI=0;LEN=1;MEANALT=2;MQM=41.434;MQMR=41.977;NS=1;NUMALT=1;ODDS=452.039;PAIRED=0;PAIREDR=0;PAO=7;PQA=6.5;PQR=6.5;PRO=7;QA=3651;QR=3148;RO=87;RPL=47;RPP=5.96022;RPPR=44.9671;RPR=59;RUN=1;SAF=65;SAP=14.81;SAR=41;SF=28;SRF=46;SRP=3.63429;SRR=41;TYPE=del	GT:GL:DP:RO:AO:QA:QR	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-250.852,0,-207.568:194:87:106:3651:3148	.	.	.	.	.	.	.	.
+chr22	19903290	.	C	G	2586.56	.	AB=0.630303;ABP=27.344;AC=1;AF=0.5;AN=2;AO=104;CIGAR=1X;DP=165;DPB=165;DPRA=0;EPP=8.35546;EPPR=4.7546;GTI=0;LEN=1;MEANALT=1;MQM=41.625;MQMR=42;NS=1;NUMALT=1;ODDS=316.553;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=3733;QR=2279;RO=61;RPL=43;RPP=9.77527;RPPR=3.33068;RPR=61;RUN=1;SAF=73;SAP=39.8418;SAR=31;SF=28;SRF=41;SRP=18.709;SRR=20;TYPE=snp	GT:GL:DP:RO:AO:QA:QR	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-272.59,0,-147.887:165:61:104:3733:2279	.	.	.	.	.	.	.	.
+chr22	19905801	.	CG	CA	3062.78	.	AB=0;ABP=0;AC=4;AF=1;AN=4;AO=137;CIGAR=1M1X;DP=232;DPB=155;DPRA=0;EPP=54.5075;EPPR=0;GTI=0;LEN=1;MEANALT=2;MQM=40.4891;MQMR=0;NS=1;NUMALT=1;ODDS=125.289;PAIRED=0.992701;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=5096;QR=0;RO=0;RPL=109;RPP=107.003;RPPR=0;RPR=28;RUN=1;SAF=69;SAP=3.02615;SAR=68;SF=0,24;SRF=0;SRP=0;SRR=0;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	1/1:-431.249,-41.2411,0:155:0:137:5096:0:0,137	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	1/1:-213.62,-21.0721,0:77:0:70:2574:0:0,70	.	.	.	.	.	.	.	.	.	.	.	.
+chr22	19905802	.	G	A	2637.44	.	AB=0;ABP=0;AC=41;AF=1;AN=58;AO=58;CIGAR=1X;DP=4319;DPB=58;DPRA=0;EPP=36.7056;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=38.5172;MQMR=0;NS=1;NUMALT=1;ODDS=85.0102;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=2105;QR=0;RO=0;RPL=48;RPP=57.0725;RPPR=0;RPR=10;RUN=1;SAF=34;SAP=6.75422;SAR=24;SF=1,2,3,4,5,6,7,8,9,10,12,13,15,17,18,19,20,21,22,26,27,28,29,30,32,33,34,35,36;SRF=0;SRP=0;SRR=0;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	1/1:-175.268,-17.4597,0:58:0:58:2105:0	0/1:-201.091,0,-187.858:165:80:85:2971:2791	1/1:-378.579,-37.9298,0:126:0:126:4501:0:0,126	1/1:-506.816,-49.8598,0:178:1:177:6050:39	0/1:-182.416,0,-208.962:164:87:76:2693:3056:87,76	1/1:-287.15,-30.7051,0:104:0:102:3467:0:0,102	0/1:-219.376,0,-214.35:186:91:95:3261:3175	0/1:-141.003,0,-108.634:109:49:60:2059:1654	0/1:-125.93,0,-170.024:128:73:55:1959:2485:73,55	0/1:-193.932,0,-129.557:136:59:77:2794:2000:59,77	.	0/1:-203.67,0,-235.793:190:99:90:3119:3471:99,90	0/1:-335.38,0,-284.423:269:127:142:4948:4336	.	1/1:-391.173,-40.6391,0:136:0:135:4638:0	.	1/1:-422.645,-44.2514,0:147:0:147:5060:0	0/1:-140.265,0,-73.3162:97:37:60:2039:1250	1/1:-502.441,-51.6625,0:174:1:173:6042:14	1/1:-433.639,-39.1707,0:140:1:139:5100:30:1,139	0/1:-201.769,0,-18.6219:89:15:73:2655:516:15,73	1/1:-309.775,-32.2102,0:108:0:107:3688:0	.	.	.	0/1:-226.092,0,-229.894:214:108:106:3464:3524	1/1:-844.838,-88.2018,0:293:0:293:10243:0:0,293	0/1:-119.855,0,-134.215:112:58:54:1874:1992	0/1:-331.757,0,-269.878:265:118:147:4948:4084	0/1:-140.204,0,-179.517:136:75:61:2175:2591	.	0/1:-141.782,0,-140.257:123:59:63:2185:2068	0/1:-159.085,0,-136.023:131:62:67:2356:2066	0/1:-120.83,0,-146.61:115:61:54:1848:2126	1/1:-205.297,-21.3731,0:71:0:71:2440:0	1/1:-453.328,-43.501,0:155:1:154:5380:32
+chr22	19906370	.	G	A	1660.06	.	AB=0.496296;ABP=3.02638;AC=3;AF=0.5;AN=6;AO=67;CIGAR=1X;DP=440;DPB=135;DPRA=0;EPP=30.2671;EPPR=54.1038;GTI=0;LEN=1;MEANALT=1;MQM=41.7164;MQMR=42;NS=1;NUMALT=1;ODDS=362.134;PAIRED=0.985075;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2417;QR=2480;RO=68;RPL=20;RPP=26.6372;RPPR=13.3567;RPR=47;RUN=1;SAF=37;SAP=4.59839;SAR=30;SF=5,7,27;SRF=39;SRP=6.20364;SRR=29;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	0/1:-168.8,0,-174.929:135:68:67:2417:2480:68,67	.	0/1:-186,0,-171.568:147:70:77:2653:2492	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-176.587,0,-185.199:158:77:77:2570:2658:77,77	.	.	.	.	.	.	.	.	.
+chr22	19906511	.	G	A	1991.70	.	AB=0.411765;ABP=14.5063;AC=12;AF=0.5;AN=20;AO=70;CIGAR=1X;DP=1336;DPB=170;DPRA=0;EPP=9.09042;EPPR=4.08507;GTI=0;LEN=1;MEANALT=2;MQM=41.4571;MQMR=42;NS=1;NUMALT=1;ODDS=379.634;PAIRED=0.971429;PAIREDR=0.979798;PAO=0;PQA=0;PQR=0;PRO=0;QA=2605;QR=3733;RO=99;RPL=42;RPP=9.09042;RPPR=7.94546;RPR=28;RUN=1;SAF=32;SAP=4.12706;SAR=38;SF=3,6,9,18,19,20,33,34,35,36;SRF=45;SRP=4.78696;SRR=54;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	0/1:-173.548,0,-272.363:170:99:70:2605:3733:99,70	.	.	1/1:-296.144,-22.2564,0:97:2:95:3497:76:2,95	.	.	0/1:-144.067,0,-235.368:146:88:58:2167:3219:88,58	.	.	.	.	.	.	.	.	0/1:-102.85,0,-114.81:88:44:43:1571:1660	1/1:-509.216,-47.3675,0:162:1:161:5918:14	0/1:-266.628,0,-232.716:192:88:103:3772:3356:88,103	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-146.015,0,-192.594:136:75:60:2220:2705	0/1:-120.291,0,-168.142:114:64:50:1834:2331	0/1:-100.273,0,-66.4332:63:27:36:1376:979	0/1:-210.812,0,-220.078:168:86:82:3052:3147
+chr22	19907099	.	C	A	8129.82	.	AB=0;ABP=0;AC=29;AF=1;AN=44;AO=462;CIGAR=1X;DP=10214;DPB=463;DPRA=0;EPP=4.21354;EPPR=5.18177;GTI=0;LEN=1;MEANALT=1;MQM=41.7251;MQMR=42;NS=1;NUMALT=1;ODDS=634.336;PAIRED=0.974026;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=16895;QR=36;RO=1;RPL=145;RPP=142.06;RPPR=5.18177;RPR=317;RUN=1;SAF=236;SAP=3.48032;SAR=226;SF=0,1,2,3,4,8,10,12,13,15,17,20,21,22,24,26,27,29,30,32,35,36;SRF=1;SRP=5.18177;SRR=0;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	1/1:-1458.21,-135.874,0:463:1:462:16895:36:1,462	1/1:-614.85,-58.0988,0:193:0:193:7086:0	0/1:-784.229,0,-631.767:572:262:310:11056:9233	0/1:-562.386,0,-629.578:468:243:225:8145:8892:243,225	1/1:-1999.51,-190.853,0:635:0:634:23131:0	.	.	.	0/1:-545.897,0,-499.196:411:197:213:7722:7163	.	0/1:-607.204,0,-690.958:508:266:242:8793:9703:266,242	.	0/1:-858.635,0,-939.6:708:370:338:12477:13248:370,338	0/1:-534.435,0,-626.905:467:247:219:7838:8817	.	1/1:-1525.81,-147.835,0:495:1:494:17794:12	.	1/1:-2119.97,-200.893,0:672:1:671:24493:14	.	.	0/1:-752.466,0,-790.821:604:312:292:10799:11296:312,292	0/1:-325.55,0,-100.098:174:49:125:4356:1761:49,125	1/1:-483.081,-41.6625,0:161:2:159:5626:74	.	1/1:-700.204,-67.7318,0:225:0:225:8108:0:0,225	.	0/1:-644.009,0,-559.183:500:232:268:9218:8165	0/1:-781.312,0,-707.266:602:289:313:11173:10215:289,313	.	0/1:-740.493,0,-900.827:677:360:315:10930:12699	0/1:-462.475,0,-576.005:405:222:183:6741:8070	.	0/1:-546.461,0,-584.347:444:230:214:7846:8246	.	.	0/1:-383.921,0,-329.966:277:131:146:5385:4757	0/1:-786.047,0,-607.81:553:244:309:10989:8953
+chr22	19907118	.	G	A	8910.15	.	AB=0;ABP=0;AC=42;AF=1;AN=58;AO=463;CIGAR=1X;DP=12973;DPB=464;DPRA=0;EPP=26.6526;EPPR=5.18177;GTI=0;LEN=1;MEANALT=1;MQM=41.7257;MQMR=42;NS=1;NUMALT=1;ODDS=635.54;PAIRED=0.980562;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=16740;QR=37;RO=1;RPL=151;RPP=124.58;RPPR=5.18177;RPR=312;RUN=1;SAF=227;SAP=3.39019;SAR=236;SF=0,1,2,3,4,6,8,9,10,12,13,15,17,18,19,20,21,22,24,26,27,28,29,30,32,33,34,35,36;SRF=1;SRP=5.18177;SRR=0;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	1/1:-1444.16,-136.097,0:464:1:463:16740:37:1,463	1/1:-572.951,-54.4864,0:181:0:181:6608:0	0/1:-701.878,0,-695.605:566:277:286:10077:9982	1/1:-1444.41,-137.828,0:465:1:461:16737:14:1,461	1/1:-1974.32,-186.76,0:629:2:626:22836:26	.	1/1:-1186.85,-114.993,0:382:0:382:13731:0:0,382	.	0/1:-546.506,0,-472.894:402:189:211:7696:6844	0/1:-561.232,0,-683.294:501:266:235:8253:9623:266,235	0/1:-610.609,0,-705.679:507:265:242:8843:9916:265,242	.	0/1:-805.432,0,-935.789:691:364:325:11751:13214:364,325	0/1:-501.717,0,-653.201:467:252:213:7424:9160	.	1/1:-1491.85,-145.397,0:485:0:483:17384:0	.	1/1:-1967.94,-190.552,0:634:0:633:22742:0	0/1:-341.804,0,-358.698:278:138:140:4922:5117	1/1:-1730.59,-170.383,0:566:0:566:20157:0	1/1:-1852.65,-177.273,0:600:2:596:21551:31:2,596	0/1:-322.75,0,-103.191:174:49:124:4332:1805:49,124	1/1:-458.004,-43.0469,0:155:1:153:5316:37	.	1/1:-692.654,-67.6968,0:230:1:228:8020:14:1,228	.	0/1:-626.675,0,-577.841:498:236:262:9027:8379	0/1:-751.592,0,-730.755:604:290:312:10860:10552:290,312	0/1:-394.177,0,-446.564:343:178:165:5715:6338	0/1:-750.094,0,-871.62:670:347:320:11069:12395	0/1:-435.172,0,-613.652:410:231:179:6447:8563	.	0/1:-534.617,0,-601.494:441:231:209:7706:8491	0/1:-547.242,0,-466.712:397:182:215:7726:6765	0/1:-534.601,0,-539.411:427:209:218:7703:7700	1/1:-830.864,-80.375,0:267:0:267:9590:0	1/1:-1654.66,-159.479,0:539:2:537:19190:30
+chr22	19907192	.	A	G	6781.51	.	AB=0;ABP=0;AC=45;AF=1;AN=62;AO=340;CIGAR=1X;DP=10691;DPB=340;DPRA=0;EPP=3.24022;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=41.7853;MQMR=0;NS=1;NUMALT=1;ODDS=475.945;PAIRED=0.985294;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=12389;QR=0;RO=0;RPL=295;RPP=402.178;RPPR=0;RPR=45;RUN=1;SAF=128;SAP=48.0747;SAR=212;SF=0,1,2,3,4,5,6,7,8,9,10,12,13,15,17,18,19,20,21,22,24,26,27,28,29,30,32,33,34,35,36;SRF=0;SRP=0;SRR=0;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	1/1:-1075.41,-102.35,0:340:0:340:12389:0:0,340	1/1:-459.869,-43.0473,0:143:0:143:5298:0	0/1:-547.835,0,-527.034:431:210:221:7811:7615	1/1:-1120.62,-107.468,0:359:0:357:12957:0:0,357	1/1:-1470.14,-136.061,0:467:2:465:16997:48	0/1:-487.912,0,-616.524:429:229:199:7098:8633:229,199	1/1:-899.318,-87.2987,0:290:0:290:10417:0:0,290	0/1:-737.588,0,-687.18:559:268:290:10418:9922	0/1:-425.902,0,-337.704:297:133:163:5939:4926	0/1:-422.884,0,-538.242:372:201:171:6228:7516:201,171	0/1:-413.301,0,-547.817:368:203:165:6063:7616:203,165	.	0/1:-631.572,0,-627.091:488:242:245:8969:8939:242,245	0/1:-396.671,0,-494.782:353:189:164:5811:6957	.	1/1:-1110.27,-107.468,0:358:0:357:12935:0	.	1/1:-1447.5,-138.173,0:460:0:459:16720:0	0/1:-301.824,0,-240.088:212:95:117:4207:3528	1/1:-1303.37,-126.433,0:420:0:420:15206:0	1/1:-1535.13,-147.806,0:491:0:491:17836:0:0,491	0/1:-293.505,0,-95.9794:151:44:107:3890:1646:44,107	1/1:-388.417,-37.0267,0:123:0:123:4458:0	.	1/1:-621.753,-58.7009,0:195:0:195:7154:0:0,195	.	0/1:-433.915,0,-464.116:365:183:181:6326:6638	1/1:-1392.81,-135.765,0:451:0:451:16081:0:0,451	0/1:-340.991,0,-299.426:258:121:137:4899:4363	0/1:-605.343,0,-670.693:512:262:250:8796:9536	0/1:-337.929,0,-457.958:307:172:135:4955:6413	.	0/1:-350.552,0,-504.875:330:188:142:5173:6991	0/1:-472.789,0,-269.086:289:111:178:6503:4109	0/1:-385.578,0,-373.722:299:144:155:5548:5358	1/1:-621.378,-59.6039,0:198:0:198:7172:0	1/1:-1171.86,-113.187,0:376:0:376:13560:0
+chr3	8775589	.	C	T	10841.60	.	AB=0.50059;ABP=3.01286;AC=2;AF=0.5;AN=4;AO=424;CIGAR=1X;DP=1585;DPB=847;DPRA=0;EPP=19.071;EPPR=9.32872;GTI=0;LEN=1;MEANALT=3;MQM=41.8915;MQMR=41.8575;NS=1;NUMALT=1;ODDS=2506.9;PAIRED=0.985849;PAIREDR=0.990499;PAO=0;PQA=0;PQR=0;PRO=0;QA=16148;QR=15692;RO=421;RPL=151;RPP=79.2372;RPPR=38.543;RPR=273;RUN=1;SAF=201;SAP=5.48906;SAR=223;SF=12,20;SRF=184;SRP=17.4988;SRR=237;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-1136.97,0,-1102.18:847:421:424:16148:15692:421,424	.	.	.	.	.	.	.	0/1:-1064.58,0,-846.605:738:334:400:15027:12355:334,400	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr3	8775661	.	C	T	8201.27	.	AB=0.492784;ABP=3.22969;AC=3;AF=0.5;AN=6;AO=239;CIGAR=1X;DP=2008;DPB=485;DPRA=0;EPP=3.23744;EPPR=4.28141;GTI=0;LEN=1;MEANALT=1;MQM=40.569;MQMR=40.9878;NS=1;NUMALT=1;ODDS=1355.68;PAIRED=0.949791;PAIREDR=0.963415;PAO=0;PQA=0;PQR=0;PRO=0;QA=8947;QR=9202;RO=246;RPL=165;RPP=78.2486;RPPR=109.818;RPR=74;RUN=1;SAF=100;SAP=16.8296;SAR=139;SF=3,12,25;SRF=101;SRP=20.0996;SRR=145;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	0/1:-605.177,0,-638.936:485:246:239:8947:9202:246,239	.	.	.	.	.	.	.	.	0/1:-904.663,0,-1025.49:743:392:350:13061:14651:392,350	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-1040.11,0,-956.19:780:374:406:14870:13828:374,406	.	.	.	.	.	.	.	.	.	.	.
+chr3	8775702	.	G	A	2287.60	.	AB=0.526104;ABP=4.48411;AC=4;AF=0.5;AN=8;AO=131;CIGAR=1X;DP=847;DPB=249;DPRA=0;EPP=3.15949;EPPR=6.14687;GTI=0;LEN=1;MEANALT=2;MQM=41.8321;MQMR=40.4957;NS=1;NUMALT=1;ODDS=587.449;PAIRED=1;PAIREDR=0.948718;PAO=0;PQA=0;PQR=0;PRO=0;QA=4654;QR=4150;RO=117;RPL=98;RPP=73.0444;RPPR=44.0084;RPR=33;RUN=1;SAF=38;SAP=53.1531;SAR=93;SF=6,9,21,24;SRF=21;SRP=107.408;SRR=96;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	0/1:-330.694,0,-277.677:249:117:131:4654:4150:117,131	.	.	0/1:-368.858,0,-245.333:248:105:143:5100:3722:105,143	.	.	.	.	.	.	.	.	.	.	.	0/1:-100.983,0,-304.449:167:117:50:1729:4084:117,50	.	.	0/1:-188.123,0,-277.605:183:105:78:2825:3850:105,78	.	.	.	.	.	.	.	.	.	.	.	.
+chr3	8787220	.	T	C	1763.48	.	AB=0.477778;ABP=3.78238;AC=5;AF=0.5;AN=10;AO=86;CIGAR=1X;DP=833;DPB=180;DPRA=0;EPP=35.7339;EPPR=65.4748;GTI=0;LEN=1;MEANALT=1;MQM=41.7558;MQMR=41.8085;NS=1;NUMALT=1;ODDS=479.504;PAIRED=1;PAIREDR=0.989362;PAO=0;PQA=0;PQR=0;PRO=0;QA=3187;QR=3552;RO=94;RPL=30;RPP=20.0791;RPPR=5.32038;RPR=56;RUN=1;SAF=55;SAP=17.5541;SAR=31;SF=3,5,9,20,24;SRF=63;SRP=26.6655;SRR=31;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	0/1:-221.252,0,-251.625:180:94:86:3187:3552:94,86	.	0/1:-230.432,0,-213.109:167:81:86:3249:3051:81,86	.	.	.	0/1:-188.945,0,-270.588:174:98:74:2787:3738:98,74	.	.	.	.	.	.	.	.	.	.	0/1:-242.127,0,-261.042:247:105:142:5341:3910:105,142	.	.	.	0/1:-65.1936,0,-101.42:65:38:27:974:1408:38,27	.	.	.	.	.	.	.	.	.	.	.	.
+chr3	8787330	.	C	T	5153.86	.	AB=0.482679;ABP=4.13866;AC=1;AF=0.5;AN=2;AO=209;CIGAR=1X;DP=433;DPB=433;DPRA=0;EPP=4.76618;EPPR=3.0103;GTI=0;LEN=1;MEANALT=1;MQM=41.799;MQMR=41.5804;NS=1;NUMALT=1;ODDS=1186.72;PAIRED=0.990431;PAIREDR=0.995536;PAO=0;PQA=0;PQR=0;PRO=0;QA=7603;QR=8311;RO=224;RPL=77;RPP=34.4395;RPPR=88.6671;RPR=132;RUN=1;SAF=114;SAP=6.76103;SAR=95;SF=16;SRF=125;SRP=9.56349;SRR=99;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-526.404,0,-587.374:433:224:209:7603:8311:224,209	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr3	14174146	.	T	C	2885.37	.	AB=0.509615;ABP=3.17734;AC=9;AF=0.5;AN=16;AO=106;CIGAR=1X;DP=1653;DPB=208;DPRA=0;EPP=4.32138;EPPR=4.06379;GTI=0;LEN=1;MEANALT=2;MQM=42;MQMR=41.9604;NS=1;NUMALT=1;ODDS=569.385;PAIRED=1;PAIREDR=0.990099;PAO=0;PQA=0;PQR=0;PRO=0;QA=3873;QR=3726;RO=101;RPL=71;RPP=29.5596;RPPR=63.403;RPR=35;RUN=1;SAF=50;SAP=3.74778;SAR=56;SF=3,5,9,12,16,20,21,24;SRF=48;SRP=3.54779;SRR=53;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	0/1:-273.749,0,-260.308:208:101:106:3873:3726:101,106	.	0/1:-432.658,0,-326.397:297:132:165:6020:4797:132,165	.	.	.	1/1:-676.873,-65.0225,0:217:0:216:7808:0:0,216	.	.	0/1:-323.397,0,-366.517:271:141:129:4674:5203:141,129	.	.	.	0/1:-321.066,0,-283.429:234:111:123:4511:4083:111,123	.	.	.	0/1:-271.631,0,-340.856:240:129:111:3953:4765:129,111	0/1:-45.4681,0,-253.058:120:92:26:929:3323:92,26	.	.	0/1:-76.2043,0,-95.5212:66:36:30:1101:1327:36,30	.	.	.	.	.	.	.	.	.	.	.	.
+chr3	14174427	.	A	T	3819.83	.	AB=0.516026;ABP=3.70628;AC=6;AF=0.5;AN=12;AO=161;CIGAR=1X;DP=1901;DPB=312;DPRA=0;EPP=3.34749;EPPR=3.02468;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=42;NS=1;NUMALT=1;ODDS=854.803;PAIRED=1;PAIREDR=0.993377;PAO=0;PQA=0;PQR=0;PRO=0;QA=5986;QR=5515;RO=151;RPL=111;RPP=53.1969;RPPR=63.7684;RPR=50;RUN=1;SAF=73;SAP=6.04497;SAR=88;SF=3,5,9,16,20,24;SRF=76;SRP=3.02468;SRR=75;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	0/1:-424.298,0,-384.453:312:151:161:5986:5515:151,161	.	0/1:-449.663,0,-580.143:399:220:179:6613:8078:220,179	.	.	.	0/1:-340.183,0,-389.676:288:151:135:4915:5482:151,135	.	.	.	.	.	.	0/1:-428.259,0,-456.61:339:173:165:6125:6446:173,165	.	.	.	0/1:-504.348,0,-478.969:380:185:195:7143:6853:185,195	.	.	.	0/1:-238.309,0,-245.52:183:93:90:3395:3465:93,90	.	.	.	.	.	.	.	.	.	.	.	.
+chr3	14175262	.	T	C	1936.82	.	AB=0.473373;ABP=4.05106;AC=6;AF=0.5;AN=12;AO=80;CIGAR=1X;DP=1002;DPB=169;DPRA=0;EPP=5.72464;EPPR=3.62026;GTI=0;LEN=1;MEANALT=1;MQM=41.425;MQMR=42;NS=1;NUMALT=1;ODDS=441.015;PAIRED=0.975;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2916;QR=3370;RO=89;RPL=26;RPP=24.2907;RPPR=15.9171;RPR=54;RUN=1;SAF=45;SAP=5.72464;SAR=35;SF=3,5,9,16,20,24;SRF=42;SRP=3.62026;SRR=47;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	0/1:-200.683,0,-240.166:169:89:80:2916:3370:89,80	.	0/1:-257.614,0,-334.261:225:123:102:3764:4651:123,102	.	.	.	0/1:-227.669,0,-188.193:159:72:87:3175:2729:72,87	.	.	.	.	.	.	0/1:-207.54,0,-242.196:171:92:79:2990:3395:92,79	.	.	.	0/1:-212.473,0,-280.005:188:104:84:3103:3891:104,84	.	.	.	0/1:-108.162,0,-133.327:90:49:41:1561:1853:49,41	.	.	.	.	.	.	.	.	.	.	.	.
+chr3	32181761	.	C	T	6505.16	.	AB=0.497238;ABP=3.03429;AC=5;AF=0.5;AN=8;AO=180;CIGAR=1X;DP=1430;DPB=362;DPRA=0;EPP=5.37479;EPPR=5.34881;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=42;NS=1;NUMALT=1;ODDS=1079.09;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=6797;QR=6819;RO=182;RPL=72;RPP=18.6449;RPPR=43.1467;RPR=108;RUN=1;SAF=89;SAP=3.05855;SAR=91;SF=0,9,12,20;SRF=90;SRP=3.05802;SRR=92;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	0/1:-478.06,0,-480.006:362:182:180:6797:6819:182,180	.	.	.	.	.	.	.	.	0/1:-363.896,0,-309.288:257:119:138:5103:4473:119,138	.	.	1/1:-1350.12,-126.734,0:422:0:421:15647:0:0,421	.	.	.	.	.	.	.	0/1:-456.001,0,-558.34:389:208:181:6642:7838:208,181	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr3	32188248	.	GAG	GG	218.55	.	AB=0.253012;ABP=46.9892;AC=1;AF=0.5;AN=2;AO=21;CIGAR=1M1D1M;DP=83;DPB=76;DPRA=0;EPP=3.94093;EPPR=3.57068;GTI=0;LEN=1;MEANALT=1;MQM=41.9048;MQMR=42;NS=1;NUMALT=1;ODDS=50.3233;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=677;QR=2224;RO=62;RPL=18;RPP=26.2761;RPPR=23.184;RPR=3;RUN=1;SAF=8;SAP=5.59539;SAR=13;SF=21;SRF=20;SRP=19.9618;SRR=42;TYPE=del	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-34.515,0,-169.064:83:62:21:677:2224:62,21	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr3	38592406	.	A	G	8153.74	.	AB=0.447412;ABP=17.3986;AC=12;AF=0.5;AN=22;AO=268;CIGAR=1X;DP=6748;DPB=599;DPRA=0;EPP=3.30199;EPPR=3.0169;GTI=0;LEN=1;MEANALT=3;MQM=41.7463;MQMR=41.9362;NS=1;NUMALT=1;ODDS=1457.94;PAIRED=1;PAIREDR=0.99696;PAO=0;PQA=0;PQR=0;PRO=0;QA=9575;QR=11993;RO=329;RPL=90;RPP=65.7561;RPPR=65.1118;RPR=178;RUN=1;SAF=161;SAP=26.6372;SAR=107;SF=0,3,6,9,10,12,16,20,21,25,27;SRF=201;SRP=38.1829;SRR=128;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	0/1:-650.721,0,-862.432:599:329:268:9575:11993:329,268	.	.	0/1:-630.942,0,-733.42:547:288:259:9132:10351:288,259	.	.	0/1:-549.305,0,-816.804:535:312:223:8166:11241:312,223	.	.	0/1:-585.575,0,-687.682:503:267:235:8476:9642:267,235	0/1:-525.468,0,-783.469:521:297:219:7818:10799:297,219	.	0/1:-875.157,0,-1067.1:771:414:354:12751:14953:414,354	.	.	.	0/1:-786.514,0,-705.094:593:284:308:11123:10198:284,308	.	.	.	0/1:-794.074,0,-1011.96:713:390:322:11589:14099:390,322	0/1:-162.848,0,-661.58:342:253:89:3043:8821:253,89	.	.	.	1/1:-2847.19,-278.071,0:939:2:936:32797:48:2,936	.	0/1:-758.625,0,-937.858:685:366:316:11091:13140:366,316	.	.	.	.	.	.	.	.	.
+chr3	38597180	.	G	A	1030.12	.	AB=0.472222;ABP=3.73412;AC=1;AF=0.5;AN=2;AO=51;CIGAR=1X;DP=108;DPB=108;DPRA=0;EPP=6.45911;EPPR=3.9627;GTI=0;LEN=1;MEANALT=1;MQM=37.2941;MQMR=40.5614;NS=1;NUMALT=1;ODDS=237.195;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1822;QR=2074;RO=57;RPL=17;RPP=15.3153;RPPR=23.1631;RPR=34;RUN=1;SAF=31;SAP=8.16222;SAR=20;SF=3;SRF=29;SRP=3.0484;SRR=28;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	0/1:-111.14,0,-143.389:108:57:51:1822:2074:57,51	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr3	38601665	.	C	T	6077.92	.	AB=0.435714;ABP=23.1119;AC=2;AF=0.5;AN=4;AO=244;CIGAR=1X;DP=1109;DPB=560;DPRA=0;EPP=68.8308;EPPR=66.7437;GTI=0;LEN=1;MEANALT=2;MQM=41.9836;MQMR=41.5987;NS=1;NUMALT=1;ODDS=1270.23;PAIRED=1;PAIREDR=0.996815;PAO=0;PQA=0;PQR=0;PRO=0;QA=8526;QR=11050;RO=314;RPL=102;RPP=17.2495;RPPR=49.5102;RPR=142;RUN=1;SAF=159;SAP=51.7438;SAR=85;SF=25,27;SRF=205;SRP=66.7437;SRR=109;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-573.964,0,-791.891:560:314:244:8526:11050:314,244	.	0/1:-688.553,0,-645.953:549:266:282:9805:9306:266,282	.	.	.	.	.	.	.	.	.
+chr3	38622465	.	TCT	TCC	250.56	.	AB=0;ABP=0;AC=2;AF=1;AN=2;AO=9;CIGAR=2M1X;DP=9;DPB=9;DPRA=0;EPP=5.18177;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=0;NS=1;NUMALT=1;ODDS=17.0818;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=335;QR=0;RO=0;RPL=6;RPP=5.18177;RPPR=0;RPR=3;RUN=1;SAF=9;SAP=22.5536;SAR=0;SF=21;SRF=0;SRP=0;SRR=0;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	1/1:-29.3352,-2.70927,0:9:0:9:335:0:0,9	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr3	38622467	.	T	C	298.92	.	AB=0.777778;ABP=15.074;AC=21;AF=0.5;AN=24;AO=14;CIGAR=1X;DP=148;DPB=18;DPRA=0;EPP=3.63072;EPPR=3.0103;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=41.5;NS=1;NUMALT=1;ODDS=4.99983;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=526;QR=148;RO=4;RPL=10;RPP=8.59409;RPPR=5.18177;RPR=4;RUN=1;SAF=10;SAP=8.59409;SAR=4;SF=0,3,5,6,9,10,12,16,20,24,25,27;SRF=3;SRP=5.18177;SRR=1;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	0/1:-40.3534,0,-7.7343:18:4:14:526:148:4,14	.	.	1/1:-43.6789,-3.91339,0:13:0:13:503:0:0,13	.	1/1:-23.6371,-2.10721,0:7:0:7:270:0:0,7	1/1:-16.4285,-1.50515,0:5:0:5:185:0:0,5	.	.	0/1:-12.5705,0,-6.12786:8:3:5:169:95:3,5	0/1:-6.51264,0,-26.6352:13:10:3:117:365:10,3	.	1/1:-40.0721,-3.61236,0:12:0:12:460:0:0,12	.	.	.	1/1:-30.4704,-2.70927,0:9:0:9:350:0:0,9	.	.	.	1/1:-60.1506,-6.0206,0:20:0:20:687:0:0,20	.	.	.	1/1:-16.9378,-1.50515,0:5:0:5:192:0:0,5	1/1:-63.0403,-6.32163,0:21:0:21:725:0:0,21	.	1/1:-50.8926,-5.11751,0:17:0:17:590:0:0,17	.	.	.	.	.	.	.	.	.
+chr3	38622868	.	G	A	4407.17	.	AB=0.471125;ABP=5.39298;AC=3;AF=0.5;AN=6;AO=155;CIGAR=1X;DP=1038;DPB=329;DPRA=0;EPP=4.70545;EPPR=3.809;GTI=0;LEN=1;MEANALT=1;MQM=41.9871;MQMR=41.8908;NS=1;NUMALT=1;ODDS=926.823;PAIRED=0.993548;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=5920;QR=6466;RO=174;RPL=95;RPP=20.1719;RPPR=99.6533;RPR=60;RUN=1;SAF=81;SAP=3.69677;SAR=74;SF=0,9,10;SRF=86;SRP=3.06022;SRR=88;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	0/1:-411.647,0,-461.049:329:174:155:5920:6466:174,155	.	.	.	.	.	.	.	.	0/1:-448.496,0,-412.323:334:161:172:6379:5993:161,172	0/1:-492.553,0,-491.352:375:189:185:7019:6987:189,185	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr3	38640484	.	C	T	55.99	.	AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X;DP=2;DPB=2;DPRA=0;EPP=3.0103;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=0;NS=1;NUMALT=1;ODDS=7.37776;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=74;QR=0;RO=0;RPL=0;RPP=7.35324;RPPR=0;RPR=2;RUN=1;SAF=1;SAP=3.0103;SAR=1;SF=16;SRF=0;SRP=0;SRR=0;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	1/1:-6.80331,-0.60206,0:2:0:2:74:0:0,2	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr3	38645420	.	T	C	8981.13	.	AB=0;ABP=0;AC=7;AF=1;AN=12;AO=540;CIGAR=1X;DP=3456;DPB=541;DPRA=0;EPP=3.0103;EPPR=5.18177;GTI=0;LEN=1;MEANALT=1;MQM=41.8833;MQMR=24;NS=1;NUMALT=1;ODDS=744.899;PAIRED=0.987037;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=19520;QR=37;RO=1;RPL=254;RPP=7.12806;RPPR=5.18177;RPR=286;RUN=1;SAF=284;SAP=6.16296;SAR=256;SF=0,3,5,9,10,16;SRF=0;SRP=5.18177;SRR=1;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	1/1:-1690.66,-160.478,0:541:1:540:19520:37:1,540	.	.	0/1:-770.29,0,-648.171:567:260:307:10899:9463:260,307	.	0/1:-913.332,0,-799.107:674:318:355:12866:11564:318,355	.	.	.	0/1:-611.992,0,-669.967:508:265:243:8805:9519:265,243	0/1:-689.985,0,-788.119:584:308:275:10009:11134:308,275	.	.	.	.	.	0/1:-767.153,0,-712.904:582:281:299:10903:10242:281,299	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr3	38647642	.	G	T	6489.11	.	AB=0.504348;ABP=3.08583;AC=3;AF=0.5;AN=6;AO=232;CIGAR=1X;DP=1518;DPB=460;DPRA=0;EPP=3.94628;EPPR=23.1631;GTI=0;LEN=1;MEANALT=1;MQM=41.8276;MQMR=41.9825;NS=1;NUMALT=1;ODDS=1312.98;PAIRED=1;PAIREDR=0.995614;PAO=0;PQA=0;PQR=0;PRO=0;QA=8755;QR=8324;RO=228;RPL=137;RPP=19.521;RPPR=14.02;RPR=95;RUN=1;SAF=70;SAP=82.2316;SAR=162;SF=3,5,16;SRF=86;SRP=32.8776;SRR=142;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	0/1:-615.908,0,-583.616:460:228:232:8755:8324:228,232	.	0/1:-741.56,0,-745.819:570:286:283:10610:10582:286,283	.	.	.	.	.	.	.	.	.	.	0/1:-641.412,0,-628.569:488:244:244:9179:8955:244,244	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr3	38674712	.	T	C	4667.22	.	AB=0;ABP=0;AC=16;AF=1;AN=24;AO=203;CIGAR=1X;DP=3132;DPB=203;DPRA=0;EPP=7.72764;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=41.9704;MQMR=0;NS=1;NUMALT=1;ODDS=286.023;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=7566;QR=0;RO=0;RPL=82;RPP=19.2803;RPPR=0;RPR=121;RUN=1;SAF=103;SAP=3.10657;SAR=100;SF=0,3,5,6,9,10,12,16,20,21,24,27;SRF=0;SRP=0;SRR=0;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	1/1:-655.555,-61.1091,0:203:0:203:7566:0:0,203	.	.	0/1:-303.488,0,-354.666:255:136:119:4397:5027:136,119	.	0/1:-419.23,0,-381.218:308:147:161:5916:5482:147,161	0/1:-220.363,0,-314.405:202:114:88:3239:4340:114,88	.	.	0/1:-285.412,0,-258.601:208:100:108:4014:3714:100,108	1/1:-816.391,-76.1606,0:254:0:253:9421:0:0,253	.	0/1:-527.129,0,-648.858:452:242:210:7643:9084:242,210	.	.	.	1/1:-850.947,-77.119,0:270:2:268:9883:44:2,268	.	.	.	0/1:-461.068,0,-380.317:329:150:179:6486:5573:150,179	0/1:-340.254,0,-66.1275:159:35:123:4478:1310:35,123	.	.	1/1:-372.467,-34.6185,0:115:0:115:4294:0:0,115	.	.	0/1:-457.469,0,-508.996:377:196:181:6585:7215:196,181	.	.	.	.	.	.	.	.	.
+chr3	38739574	.	T	C	13239.36	.	AB=0;ABP=0;AC=26;AF=1;AN=26;AO=653;CIGAR=1X;DP=7890;DPB=653;DPRA=0;EPP=11.6596;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=25.5498;MQMR=0;NS=1;NUMALT=1;ODDS=909.855;PAIRED=0.995406;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=24549;QR=0;RO=0;RPL=210;RPP=183.542;RPPR=0;RPR=443;RUN=1;SAF=337;SAP=4.47679;SAR=316;SF=0,3,5,6,9,10,12,16,20,21,24,25,27;SRF=0;SRP=0;SRR=0;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	1/1:-1433.27,-196.573,0:653:0:653:24549:0:0,653	.	.	1/1:-1242.23,-171.888,0:571:0:571:21441:0:0,571	.	1/1:-1550.25,-213.239,0:715:1:714:26999:20:1,714	1/1:-1206.41,-156.225,0:541:2:538:20184:76:2,538	.	.	1/1:-1178.91,-162.255,0:539:0:539:20307:0:0,539	1/1:-1319.49,-176.404,0:586:0:586:22241:0:0,586	.	1/1:-1793.58,-247.748,0:826:0:823:30775:0:0,823	.	.	.	1/1:-1333.87,-180.618,0:601:0:600:22726:0:0,600	.	.	.	1/1:-1693.04,-230.589,0:767:0:766:28819:0:0,766	1/1:-314.744,-45.4555,0:151:0:151:5519:0:0,151	.	.	1/1:-741.885,-97.5337,0:324:0:324:12289:0:0,324	1/1:-2028.94,-275.743,0:916:0:916:34140:0:0,916	.	1/1:-1558.27,-210.42,0:700:0:699:25889:0:0,699	.	.	.	.	.	.	.	.	.
+chr3	38739727	.	C	T	3533.37	.	AB=0.519608;ABP=4.71342;AC=1;AF=0.5;AN=2;AO=265;CIGAR=1X;DP=510;DPB=510;DPRA=0;EPP=5.96842;EPPR=4.7546;GTI=0;LEN=1;MEANALT=2;MQM=23.0981;MQMR=27.4262;NS=1;NUMALT=1;ODDS=813.589;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=9793;QR=8918;RO=244;RPL=72;RPP=122.982;RPPR=114.645;RPR=193;RUN=1;SAF=162;SAP=31.5344;SAR=103;SF=0;SRF=145;SRP=21.8416;SRR=99;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	0/1:-376.47,0,-417.974:510:244:265:9793:8918:244,265	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr3	38739845	.	A	G	8942.24	.	AB=0;ABP=0;AC=24;AF=1;AN=26;AO=484;CIGAR=1X;DP=6193;DPB=484;DPRA=0;EPP=42.6531;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=24.3079;MQMR=0;NS=1;NUMALT=1;ODDS=675.572;PAIRED=0.997934;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=18256;QR=0;RO=0;RPL=288;RPP=40.9841;RPPR=0;RPR=196;RUN=1;SAF=165;SAP=109.412;SAR=319;SF=0,3,5,6,9,10,12,16,20,21,24,25,27;SRF=0;SRP=0;SRR=0;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	1/1:-1026.85,-145.699,0:484:0:484:18256:0:0,484	.	.	1/1:-1040.39,-144.795,0:481:0:481:18216:0:0,481	.	1/1:-1254.16,-173.995,0:578:0:578:21789:0:0,578	0/1:-344.279,0,-418.557:403:188:215:8032:7065:188,215	.	.	1/1:-999.073,-140.28,0:467:0:466:17517:0:0,466	1/1:-976.546,-136.367,0:453:0:453:17045:0:0,453	.	1/1:-1267.24,-178.511,0:593:0:593:22443:0:0,593	.	.	.	1/1:-1002.15,-136.668,0:454:0:454:17148:0:0,454	.	.	.	0/1:-472.799,0,-731.55:632:325:306:11500:12062:325,306	1/1:-279.36,-39.1339,0:130:0:130:4874:0:0,130	.	.	1/1:-572.644,-79.1709,0:263:0:263:10005:0:0,263	1/1:-1434.45,-204.42,0:685:1:683:25219:17:1,683	.	1/1:-1216.73,-167.8,0:570:2:568:21151:40:2,568	.	.	.	.	.	.	.	.	.
+chr3	38739857	.	C	T	906.83	.	AB=0.560345;ABP=6.67934;AC=1;AF=0.5;AN=2;AO=65;CIGAR=1X;DP=116;DPB=116;DPRA=0;EPP=15.0703;EPPR=3.3935;GTI=0;LEN=1;MEANALT=1;MQM=23.8615;MQMR=24.451;NS=1;NUMALT=1;ODDS=155.991;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=2363;QR=1904;RO=51;RPL=41;RPP=12.665;RPPR=12.5903;RPR=24;RUN=1;SAF=24;SAP=12.665;SAR=41;SF=21;SRF=19;SRP=10.206;SRR=32;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-100.325,0,-75.8076:116:51:65:2363:1904:51,65	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr3	38748833	.	T	C	4077.58	.	AB=0;ABP=0;AC=4;AF=1;AN=6;AO=211;CIGAR=1X;DP=696;DPB=211;DPRA=0;EPP=12.9003;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=37.7536;MQMR=0;NS=1;NUMALT=1;ODDS=297.113;PAIRED=0.995261;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=7852;QR=0;RO=0;RPL=129;RPP=25.7439;RPPR=0;RPR=82;RUN=1;SAF=115;SAP=6.72547;SAR=96;SF=9,10,16;SRF=0;SRP=0;SRR=0;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	1/1:-620.687,-63.5173,0:211:0:211:7852:0:0,211	0/1:-348.933,0,-179.954:222:78:144:5426:2922:78,144	.	.	.	.	.	0/1:-282.792,0,-351.336:263:139:124:4669:5218:139,124	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr3	38753732	.	A	T	1356.34	.	AB=0.5625;ABP=6.26751;AC=1;AF=0.5;AN=2;AO=54;CIGAR=1X;DP=96;DPB=96;DPRA=0;EPP=8.80089;EPPR=3.06326;GTI=0;LEN=1;MEANALT=2;MQM=42;MQMR=42;NS=1;NUMALT=1;ODDS=215.876;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2018;QR=1542;RO=41;RPL=18;RPP=16.0391;RPPR=31.0276;RPR=36;RUN=1;SAF=39;SAP=26.1727;SAR=15;SF=16;SRF=30;SRP=22.1298;SRR=11;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-146.233,0,-104.778:96:41:54:2018:1542:41,54	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr3	38763863	.	G	C	2847.51	.	AB=0.542208;ABP=7.77626;AC=6;AF=0.5;AN=12;AO=167;CIGAR=1X;DP=1415;DPB=308;DPRA=0;EPP=6.76812;EPPR=3.1489;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=42;NS=1;NUMALT=1;ODDS=787.294;PAIRED=1;PAIREDR=0.985816;PAO=0;PQA=0;PQR=0;PRO=0;QA=6222;QR=5280;RO=141;RPL=124;RPP=88.3219;RPPR=142;RPR=43;RUN=1;SAF=75;SAP=6.76812;SAR=92;SF=5,12,16,21,24,25;SRF=62;SRP=7.46105;SRR=79;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	0/1:-446.908,0,-364.789:308:141:167:6222:5280:141,167	.	.	.	.	.	.	0/1:-401.052,0,-405.924:316:159:156:5722:5843:159,156	.	.	.	0/1:-178.73,0,-349.96:203:128:75:2766:4741:128,75	.	.	.	.	0/1:-238.646,0,-81.0517:124:37:87:3180:1365:37,87	.	.	0/1:-94.7518,0,-184.176:105:66:39:1452:2488:66,39	0/1:-441.932,0,-474.163:359:186:172:6342:6706:186,172	.	.	.	.	.	.	.	.	.	.	.
+chr3	38768247	.	G	A	183.72	.	AB=0.357143;ABP=5.49198;AC=5;AF=0.5;AN=10;AO=5;CIGAR=1X;DP=101;DPB=14;DPRA=0;EPP=6.91895;EPPR=5.18177;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=42;NS=1;NUMALT=1;ODDS=15.2447;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=191;QR=302;RO=9;RPL=1;RPP=6.91895;RPPR=5.18177;RPR=4;RUN=1;SAF=5;SAP=13.8677;SAR=0;SF=5,16,21,24,25;SRF=9;SRP=22.5536;SRR=0;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	0/1:-12.6511,0,-22.5453:14:9:5:191:302:9,5	.	.	.	.	.	.	.	.	.	.	0/1:-16.9829,0,-36.6273:21:14:7:265:488:14,7	.	.	.	.	0/1:-42.2775,0,-3.49846:19:3:16:546:101:3,16	.	.	0/1:-7.01242,0,-2.45036:4:1:3:91:38:1,3	0/1:-56.7304,0,-47.163:43:21:22:799:691:21,22	.	.	.	.	.	.	.	.	.	.	.
+chr3	38768300	.	T	C	455.96	.	AB=0.4;ABP=5.61607;AC=5;AF=0.5;AN=10;AO=12;CIGAR=1X;DP=208;DPB=30;DPRA=0;EPP=9.52472;EPPR=15.074;GTI=0;LEN=1;MEANALT=1;MQM=40.5;MQMR=41.8889;NS=1;NUMALT=1;ODDS=48.0826;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=460;QR=682;RO=18;RPL=3;RPP=9.52472;RPPR=15.074;RPR=9;RUN=1;SAF=12;SAP=29.068;SAR=0;SF=5,16,21,24,25;SRF=18;SRP=42.0968;SRR=0;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	0/1:-30.1281,0,-50.2611:30:18:12:460:682:18,12	.	.	.	.	.	.	.	.	.	.	0/1:-43.3695,0,-65.1829:42:24:18:651:897:24,18	.	.	.	.	0/1:-72.9573,0,-8.03401:30:5:25:943:194:5,25	.	.	0/1:-30.1841,0,-14.8905:17:6:11:403:227:6,11	0/1:-133.956,0,-87.7686:89:36:53:1865:1321:36,53	.	.	.	.	.	.	.	.	.	.	.
+chr3	38768334	.	T	C	550.98	.	AB=0.586957;ABP=6.03148;AC=1;AF=0.5;AN=2;AO=27;CIGAR=1X;DP=46;DPB=46;DPRA=0;EPP=6.95112;EPPR=5.8675;GTI=0;LEN=1;MEANALT=1;MQM=40.5926;MQMR=42;NS=1;NUMALT=1;ODDS=84.6861;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=953;QR=705;RO=19;RPL=10;RPP=6.95112;RPPR=5.8675;RPR=17;RUN=1;SAF=27;SAP=61.6401;SAR=0;SF=9;SRF=19;SRP=44.2683;SRR=0;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	0/1:-68.8575,0,-47.7617:46:19:27:953:705:19,27	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr3	38798171	.	C	T	42.33	.	AB=0.666667;ABP=3.73412;AC=4;AF=0.5;AN=8;AO=2;CIGAR=1X;DP=25;DPB=3;DPRA=0;EPP=3.0103;EPPR=5.18177;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=42;NS=1;NUMALT=1;ODDS=1.17101;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=69;QR=39;RO=1;RPL=1;RPP=3.0103;RPPR=5.18177;RPR=1;RUN=1;SAF=2;SAP=7.35324;SAR=0;SF=5,16,21,25;SRF=1;SRP=5.18177;SRR=0;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	0/1:-5.45909,0,-2.82049:3:1:2:69:39:1,2	.	.	.	.	.	.	.	.	.	.	0/1:-5.50401,0,-8.78752:5:3:2:77:115:3,2	.	.	.	.	0/1:-12.1399,0,-2.21843:5:1:4:154:39:1,4	.	.	.	0/1:-13.2575,0,-19.4686:12:7:5:191:262:7,5	.	.	.	.	.	.	.	.	.	.	.
+chr3	52485839	.	T	A	6625.38	.	AB=0.532632;ABP=7.40353;AC=1;AF=0.5;AN=2;AO=253;CIGAR=1X;DP=475;DPB=475;DPRA=0;EPP=20.3907;EPPR=6.92286;GTI=0;LEN=1;MEANALT=1;MQM=41.7075;MQMR=41.7568;NS=1;NUMALT=1;ODDS=1283.02;PAIRED=1;PAIREDR=0.986486;PAO=0;PQA=0;PQR=0;PRO=0;QA=9481;QR=8287;RO=222;RPL=145;RPP=14.7603;RPPR=56.5733;RPR=108;RUN=1;SAF=123;SAP=3.43086;SAR=130;SF=0;SRF=105;SRP=4.41882;SRR=117;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	0/1:-673.27,0,-570.864:475:222:253:9481:8287:222,253	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr3	57835519	.	A	G	993.31	.	AB=0.588235;ABP=7.60871;AC=1;AF=0.5;AN=2;AO=40;CIGAR=1X;DP=68;DPB=68;DPRA=0;EPP=20.5992;EPPR=5.80219;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=42;NS=1;NUMALT=1;ODDS=147.614;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1501;QR=1064;RO=28;RPL=12;RPP=16.9077;RPPR=18.2106;RPR=28;RUN=1;SAF=27;SAP=13.6505;SAR=13;SF=3;SRF=14;SRP=3.0103;SRR=14;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	0/1:-109.734,0,-71.8572:68:28:40:1501:1064:28,40	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr3	57846576	.	TCA	TAA	1182.58	.	AB=0;ABP=0;AC=4;AF=1;AN=4;AO=49;CIGAR=1M1X1M;DP=103;DPB=60.3333;DPRA=0;EPP=6.59988;EPPR=0;GTI=0;LEN=1;MEANALT=4;MQM=41.5714;MQMR=0;NS=1;NUMALT=1;ODDS=33.8078;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1641;QR=0;RO=0;RPL=37;RPP=30.7077;RPPR=0;RPR=12;RUN=1;SAF=19;SAP=8.37251;SAR=30;SF=0,16;SRF=0;SRP=0;SRR=0;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	1/1:-142.645,-14.7505,0:61:0:49:1641:0:0,49	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	1/1:-106.35,-10.8371,0:42:0:36:1223:0:0,36	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr3	57846577	.	CAAAAAAAAAATACTAAATAG	AAAAAAAAAAATACTAAATAG	452.41	.	AB=0.596491;ABP=7.61992;AC=5;AF=0.5;AN=10;AO=34;CIGAR=1X;DP=266;DPB=57;DPRA=0;EPP=5.30951;EPPR=3.10471;GTI=0;LEN=1;MEANALT=1;MQM=41.8824;MQMR=41.8261;NS=1;NUMALT=1;ODDS=97.2641;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1176;QR=783;RO=23;RPL=28;RPP=33.9218;RPPR=30.2953;RPR=6;RUN=1;SAF=14;SAP=5.30951;SAR=20;SF=3,6,21,24,27;SRF=8;SRP=7.63648;SRR=15;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	0/1:.,.,-51.3763:57:23:34:1176:783:23,34	.	.	0/1:.,.,-32.8011:44:17:27:867:523:17,27	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:.,.,-94.2442:57:42:13:477:1262:42,13	.	.	0/1:-25.5382,0,-45.2411:39:17:10:364:614:17,10	.	.	0/1:.,.,-81.8014:69:36:33:1072:1171:36,33	.	.	.	.	.	.	.	.	.
+chr3	57850505	.	CTTTTTTTTTTTTGGAC	CTTTTTTTTTTTGGAC	13.03	.	AB=0.160714;ABP=59.0033;AC=1;AF=0.5;AN=2;AO=9;CIGAR=1M1D15M;DP=56;DPB=55.5294;DPRA=0;EPP=3.25157;EPPR=4.33437;GTI=0;LEN=1;MEANALT=5;MQM=42;MQMR=41.0244;NS=1;NUMALT=1;ODDS=2.9483;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=296;QR=1439;RO=41;RPL=5;RPP=3.25157;RPPR=18.3165;RPR=4;RUN=1;SAF=3;SAP=5.18177;SAR=6;SF=21;SRF=16;SRP=7.30028;SRR=25;TYPE=del	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-10.9358,0,-109.276:56:41:9:296:1439:41,9	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr3	57857438	.	TAT	TGT	340.19	.	AB=0.548387;ABP=3.64073;AC=1;AF=0.5;AN=2;AO=17;CIGAR=1M1X1M;DP=31;DPB=31;DPRA=0;EPP=3.13803;EPPR=3.0103;GTI=0;LEN=1;MEANALT=3;MQM=38;MQMR=38.2;NS=1;NUMALT=1;ODDS=34.6084;PAIRED=0.647059;PAIREDR=0.7;PAO=0;PQA=0;PQR=0;PRO=0;QA=578;QR=370;RO=10;RPL=7;RPP=4.1599;RPPR=3.87889;RPR=10;RUN=1;SAF=2;SAP=24.5973;SAR=15;SF=10;SRF=1;SRP=16.9077;SRR=9;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	0/1:-41.7649,0,-21.5392:31:10:17:578:370:10,17	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr3	57882601	.	C	T	889.81	.	AB=0.372881;ABP=11.2913;AC=5;AF=0.5;AN=10;AO=22;CIGAR=1X;DP=402;DPB=59;DPRA=0;EPP=3.40511;EPPR=3.06899;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=42;NS=1;NUMALT=1;ODDS=106.173;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=818;QR=1313;RO=37;RPL=6;RPP=12.8806;RPPR=34.0565;RPR=16;RUN=1;SAF=10;SAP=3.40511;SAR=12;SF=5,12,20,25,27;SRF=21;SRP=4.47751;SRR=16;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	0/1:-53.2924,0,-96.7988:59:37:22:818:1313:37,22	.	.	.	.	.	.	0/1:-84.0974,0,-88.9759:67:35:32:1206:1252:35,32	.	.	.	.	.	.	.	0/1:-95.0234,0,-117.374:80:44:36:1376:1629:44,36	.	.	.	.	0/1:-151.823,0,-92.5087:95:37:56:2080:1388:37,56	.	0/1:-98.9035,0,-154.748:101:60:41:1487:2125:60,41	.	.	.	.	.	.	.	.	.
+chr3	57898376	.	T	A	3738.51	.	AB=0.46789;ABP=5.9388;AC=1;AF=0.5;AN=2;AO=153;CIGAR=1X;DP=327;DPB=327;DPRA=0;EPP=13.3567;EPPR=12.1606;GTI=0;LEN=1;MEANALT=2;MQM=41.7778;MQMR=42;NS=1;NUMALT=1;ODDS=860.823;PAIRED=1;PAIREDR=0.982659;PAO=0;PQA=0;PQR=0;PRO=0;QA=5805;QR=6568;RO=173;RPL=129;RPP=159.484;RPPR=186.782;RPR=24;RUN=1;SAF=57;SAP=24.5973;SAR=96;SF=0;SRF=67;SRP=22.1017;SRR=106;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	0/1:-401.3,0,-469.029:327:173:153:5805:6568:173,153	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr3	57898434	.	T	A	1506.62	.	AB=0.621053;ABP=15.102;AC=1;AF=0.5;AN=2;AO=59;CIGAR=1X;DP=95;DPB=95;DPRA=0;EPP=3.0471;EPPR=3.9754;GTI=0;LEN=1;MEANALT=1;MQM=41.3898;MQMR=42;NS=1;NUMALT=1;ODDS=177.401;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2253;QR=1353;RO=36;RPL=43;RPP=29.8409;RPPR=43.7857;RPR=16;RUN=1;SAF=15;SAP=33.963;SAR=44;SF=6;SRF=15;SRP=5.18177;SRR=21;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	0/1:-163.828,0,-88.666:95:36:59:2253:1353:36,59	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr3	57902639	.	G	A	2412.50	.	AB=0.758929;ABP=68.232;AC=2;AF=0.5;AN=4;AO=85;CIGAR=1X;DP=315;DPB=112;DPRA=0;EPP=10.3933;EPPR=6.95112;GTI=0;LEN=1;MEANALT=1;MQM=41.9765;MQMR=42;NS=1;NUMALT=1;ODDS=81.1627;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=3145;QR=983;RO=27;RPL=24;RPP=37.9838;RPPR=16.6021;RPR=61;RUN=1;SAF=71;SAP=86.0116;SAR=14;SF=21,25;SRF=22;SRP=26.2531;SRR=5;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-238.758,0,-51.757:112:27:85:3145:983:27,85	.	.	.	0/1:-289.401,0,-230.334:203:92:111:4048:3396:92,111	.	.	.	.	.	.	.	.	.	.	.
+chr3	57908594	.	CTTTTTTTTTCTTTGCC	CTTTTTTTTCTTTGCC	2169.80	.	AB=0;ABP=0;AC=9;AF=1;AN=14;AO=164;CIGAR=1M1D15M;DP=935;DPB=158.824;DPRA=0;EPP=31.0276;EPPR=0;GTI=0;LEN=1;MEANALT=2;MQM=42;MQMR=0;NS=1;NUMALT=1;ODDS=245.82;PAIRED=1;PAIREDR=0;PAO=5;PQA=185.5;PQR=185.5;PRO=5;QA=6004;QR=0;RO=0;RPL=28;RPP=157.45;RPPR=0;RPR=136;RUN=1;SAF=87;SAP=4.33437;SAR=77;SF=0,3,6,16,21,24,27;SRF=0;SRP=0;SRR=0;TYPE=del	GT:GL:DP:RO:AO:QA:QR:AD	1/1:-520.682,-55.3895,0:168:0:164:6004:0:0,164	.	.	0/1:-171.592,0,-136.851:123:54:65:2418:2015:54,65	.	.	0/1:-151.99,0,-144.575:121:56:59:2156:2064:56,59	.	.	.	.	.	.	.	.	.	1/1:-397.593,-43.6494,0:134:0:129:4586:0:0,129	.	.	.	.	0/1:-25.4894,0,-206.771:94:75:17:612:2686:75,17	.	.	0/1:-82.9267,0,-120.473:79:45:34:1240:1672:45,34	.	.	0/1:-288.376,0,-236.477:216:98:116:4158:3541:98,116	.	.	.	.	.	.	.	.	.
+chr3	196771513	.	G	A	1356.75	.	AB=0.464286;ABP=4.25114;AC=2;AF=0.5;AN=4;AO=52;CIGAR=1X;DP=199;DPB=112;DPRA=0;EPP=27.0635;EPPR=44.8473;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=41.4333;NS=1;NUMALT=1;ODDS=300.146;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2010;QR=2203;RO=60;RPL=33;RPP=11.1951;RPPR=5.32654;RPR=19;RUN=1;SAF=27;SAP=3.17734;SAR=25;SF=10,24;SRF=25;SRP=6.62942;SRR=35;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	0/1:-139.749,0,-156.904:112:60:52:2010:2203:60,52	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-149.735,0,-82.4417:87:34:53:2036:1249:34,53	.	.	.	.	.	.	.	.	.	.	.	.
+chr3	196771554	.	T	C	1283.63	.	AB=0.443609;ABP=6.68384;AC=2;AF=0.5;AN=4;AO=59;CIGAR=1X;DP=222;DPB=133;DPRA=0;EPP=7.46366;EPPR=8.76177;GTI=0;LEN=1;MEANALT=1;MQM=41.9661;MQMR=41.5405;NS=1;NUMALT=1;ODDS=336.723;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2234;QR=2704;RO=74;RPL=34;RPP=5.99147;RPPR=8.76177;RPR=25;RUN=1;SAF=29;SAP=3.0471;SAR=30;SF=10,24;SRF=28;SRP=12.5178;SRR=46;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	0/1:-153.457,0,-193.565:133:74:59:2234:2704:74,59	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-118.705,0,-114.712:89:43:45:1676:1633:43,45	.	.	.	.	.	.	.	.	.	.	.	.
+chr3	196778438	.	C	T	2445.38	.	AB=0.47;ABP=3.79203;AC=11;AF=0.5;AN=18;AO=47;CIGAR=1X;DP=1248;DPB=100;DPRA=0;EPP=3.42611;EPPR=5.01789;GTI=0;LEN=1;MEANALT=1;MQM=38.766;MQMR=39.8113;NS=1;NUMALT=1;ODDS=250.213;PAIRED=1;PAIREDR=0.981132;PAO=0;PQA=0;PQR=0;PRO=0;QA=1782;QR=1956;RO=53;RPL=23;RPP=3.0565;RPPR=3.37904;RPR=24;RUN=1;SAF=30;SAP=10.8184;SAR=17;SF=0,3,5,6,10,20,21,24,25;SRF=31;SRP=6.32897;SRR=22;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	0/1:-115.471,0,-134.382:100:53:47:1782:1956:53,47	.	.	0/1:-164.619,0,-163.113:129:65:64:2439:2395:65,64	.	0/1:-293.849,0,-206.636:202:87:115:4285:3164:87,115	1/1:-336.876,-31.714,0:110:1:109:4096:14:1,109	.	.	.	0/1:-162.162,0,-169.24:136:69:67:2457:2486:69,67	.	.	.	.	.	.	.	.	.	0/1:-191.872,0,-152.849:135:62:73:2764:2247:62,73	0/1:-87.7005,0,-141.415:89:53:36:1315:1925:53,36	.	.	0/1:-123.08,0,-88.1206:82:35:47:1782:1294:35,47	1/1:-800.19,-79.773,0:265:0:265:9773:0:0,265	.	.	.	.	.	.	.	.	.	.	.
+chr3	196792163	.	C	T	1489.09	.	AB=0.504202;ABP=3.02855;AC=1;AF=0.5;AN=2;AO=60;CIGAR=1X;DP=119;DPB=119;DPRA=0;EPP=3.15506;EPPR=3.34154;GTI=0;LEN=1;MEANALT=1;MQM=41.6333;MQMR=42;NS=1;NUMALT=1;ODDS=327.409;PAIRED=0.966667;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2265;QR=2186;RO=59;RPL=19;RPP=20.5268;RPPR=19.2411;RPR=41;RUN=1;SAF=42;SAP=23.8564;SAR=18;SF=16;SRF=45;SRP=38.3795;SRR=14;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-158.897,0,-153.601:119:59:60:2265:2186:59,60	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr3	196812473	.	C	T	2176.21	.	AB=0.494318;ABP=3.05965;AC=1;AF=0.5;AN=2;AO=87;CIGAR=1X;DP=176;DPB=176;DPRA=0;EPP=4.23331;EPPR=3.63429;GTI=0;LEN=1;MEANALT=3;MQM=42;MQMR=41.7931;NS=1;NUMALT=1;ODDS=487.194;PAIRED=1;PAIREDR=0.988506;PAO=0;PQA=0;PQR=0;PRO=0;QA=3217;QR=3112;RO=87;RPL=30;RPP=21.2057;RPPR=3.23494;RPR=57;RUN=1;SAF=48;SAP=5.03202;SAR=39;SF=20;SRF=46;SRP=3.63429;SRR=41;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-226.197,0,-218.157:176:87:87:3217:3112:87,87	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr3	196865242	.	C	T	926.16	.	AB=0;ABP=0;AC=8;AF=1;AN=12;AO=40;CIGAR=1X;DP=305;DPB=41;DPRA=0;EPP=8.43898;EPPR=0;GTI=0;LEN=1;MEANALT=2;MQM=42;MQMR=0;NS=1;NUMALT=1;ODDS=60.0569;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1493;QR=0;RO=0;RPL=35;RPP=51.8684;RPPR=0;RPR=5;RUN=1;SAF=14;SAP=10.8276;SAR=26;SF=6,10,20,21,24,25;SRF=0;SRP=0;SRR=0;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	1/1:-129.504,-12.0412,0:41:0:40:1493:0:0,40	.	.	.	0/1:-96.0278,0,-40.2464:52:18:34:1285:638:18,34	.	.	.	.	.	.	.	.	.	0/1:-75.8278,0,-58.0216:51:23:28:1052:838:23,28	0/1:-16.4169,0,-92.6197:43:34:9:334:1219:34,9	.	.	0/1:-30.5003,0,-44.5769:29:17:12:448:609:17,12	1/1:-281.771,-26.7917,0:89:0:89:3249:0:0,89	.	.	.	.	.	.	.	.	.	.	.
+chr3	196869688	.	A	G	2408.42	.	AB=0;ABP=0;AC=26;AF=1;AN=26;AO=63;CIGAR=1X;DP=1019;DPB=63;DPRA=0;EPP=45.2334;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=41.3968;MQMR=0;NS=1;NUMALT=1;ODDS=91.9417;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=2267;QR=0;RO=0;RPL=40;RPP=12.9715;RPPR=0;RPR=23;RUN=1;SAF=42;SAP=18.2106;SAR=21;SF=0,3,5,6,9,10,12,16,20,21,24,25,27;SRF=0;SRP=0;SRR=0;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	1/1:-196.825,-18.9649,0:63:0:63:2267:0:0,63	.	.	1/1:-231.837,-21.3731,0:71:0:71:2680:0:0,71	.	1/1:-261.967,-24.3834,0:81:0:81:3022:0:0,81	1/1:-205.79,-19.2659,0:64:0:64:2369:0:0,64	.	.	1/1:-142.518,-13.5464,0:45:0:45:1647:0:0,45	1/1:-208.485,-19.567,0:65:0:65:2416:0:0,65	.	1/1:-327.264,-31.3071,0:104:0:104:3777:0:0,104	.	.	.	1/1:-232.465,-21.6742,0:72:0:72:2707:0:0,72	.	.	.	1/1:-264.88,-24.9855,0:83:0:83:3050:0:0,83	1/1:-220.281,-20.47,0:68:0:68:2536:0:0,68	.	.	1/1:-111.953,-10.235,0:34:0:34:1290:0:0,34	1/1:-432.119,-40.9401,0:137:0:136:4984:0:0,136	.	1/1:-424.238,-39.4349,0:132:0:131:4896:0:0,131	.	.	.	.	.	.	.	.	.
+chr3	196876600	.	G	A	1092.14	.	AB=0.4875;ABP=3.11887;AC=4;AF=0.5;AN=6;AO=39;CIGAR=1X;DP=208;DPB=80;DPRA=0;EPP=3.51141;EPPR=3.06326;GTI=0;LEN=1;MEANALT=1;MQM=41.8974;MQMR=42;NS=1;NUMALT=1;ODDS=201.235;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1372;QR=1511;RO=41;RPL=29;RPP=23.1103;RPPR=67.8897;RPR=10;RUN=1;SAF=21;SAP=3.51141;SAR=18;SF=5,9,12;SRF=20;SRP=3.06326;SRR=21;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	0/1:-95.2842,0,-107.045:80:41:39:1372:1511:41,39	.	.	.	1/1:-151.603,-14.1484,0:47:0:47:1747:0:0,47	.	.	0/1:-101.626,0,-105.195:81:42:39:1455:1508:42,39	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr3	196921360	.	T	C	1525.49	.	AB=0.575472;ABP=8.25461;AC=1;AF=0.5;AN=2;AO=61;CIGAR=1X;DP=106;DPB=106;DPRA=0;EPP=3.0459;EPPR=4.21667;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=41.9111;NS=1;NUMALT=1;ODDS=235.178;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2199;QR=1627;RO=45;RPL=34;RPP=4.7546;RPPR=3.44459;RPR=27;RUN=1;SAF=31;SAP=3.0459;SAR=30;SF=6;SRF=16;SRP=11.1654;SRR=29;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	0/1:-159.339,0,-109.52:106:45:61:2199:1627:45,61	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr4	114120284	.	C	T	416.75	.	AB=0.461538;ABP=3.51141;AC=1;AF=0.5;AN=2;AO=18;CIGAR=1X;DP=39;DPB=39;DPRA=0;EPP=4.9405;EPPR=3.1137;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=42;NS=1;NUMALT=1;ODDS=95.9598;PAIRED=1;PAIREDR=0.952381;PAO=0;PQA=0;PQR=0;PRO=0;QA=682;QR=808;RO=21;RPL=12;RPP=7.35324;RPPR=26.2761;RPR=6;RUN=1;SAF=7;SAP=4.9405;SAR=11;SF=10;SRF=11;SRP=3.1137;SRR=10;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	0/1:-47.6015,0,-58.2695:39:21:18:682:808:21,18	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr4	114161619	.	T	C	1832.43	.	AB=0.573643;ABP=9.08706;AC=1;AF=0.5;AN=2;AO=74;CIGAR=1X;DP=129;DPB=129;DPRA=0;EPP=4.06669;EPPR=3.36563;GTI=0;LEN=1;MEANALT=1;MQM=41.9459;MQMR=42;NS=1;NUMALT=1;ODDS=297.419;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2730;QR=2093;RO=55;RPL=13;RPP=70.6194;RPPR=51.3749;RPR=61;RUN=1;SAF=45;SAP=10.5224;SAR=29;SF=10;SRF=37;SRP=17.2631;SRR=18;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	0/1:-198.178,0,-142.42:129:55:74:2730:2093:55,74	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr4	114195737	.	C	T	3971.77	.	AB=0.435013;ABP=16.8398;AC=1;AF=0.5;AN=2;AO=164;CIGAR=1X;DP=377;DPB=377;DPRA=0;EPP=3.22215;EPPR=5.30411;GTI=0;LEN=1;MEANALT=1;MQM=41.8902;MQMR=41.9812;NS=1;NUMALT=1;ODDS=914.535;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=6017;QR=7850;RO=213;RPL=92;RPP=8.30657;RPPR=10.4422;RPR=72;RUN=1;SAF=80;SAP=3.22215;SAR=84;SF=0;SRF=103;SRP=3.50984;SRR=110;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	0/1:-406.135,0,-567.681:377:213:164:6017:7850:213,164	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr4	114213631	.	C	T	6089.13	.	AB=0.487705;ABP=3.65106;AC=1;AF=0.5;AN=2;AO=238;CIGAR=1X;DP=488;DPB=488;DPRA=0;EPP=10.1634;EPPR=14.949;GTI=0;LEN=1;MEANALT=2;MQM=41.8067;MQMR=41.9076;NS=1;NUMALT=1;ODDS=1402.07;PAIRED=0.991597;PAIREDR=0.991968;PAO=0;PQA=0;PQR=0;PRO=0;QA=8904;QR=9416;RO=249;RPL=92;RPP=29.6154;RPPR=44.5299;RPR=146;RUN=1;SAF=129;SAP=6.65983;SAR=109;SF=3;SRF=133;SRP=5.5306;SRR=116;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	0/1:-620.02,0,-666.969:488:249:238:8904:9416:249,238	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr4	114257201	.	C	T	3489.75	.	AB=0.55642;ABP=10.1162;AC=1;AF=0.5;AN=2;AO=143;CIGAR=1X;DP=257;DPB=257;DPRA=0;EPP=14.0803;EPPR=5.3355;GTI=0;LEN=1;MEANALT=2;MQM=41.972;MQMR=42;NS=1;NUMALT=1;ODDS=600.546;PAIRED=0.993007;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=5108;QR=4066;RO=113;RPL=110;RPP=93.0429;RPPR=79.2809;RPR=33;RUN=1;SAF=61;SAP=9.70694;SAR=82;SF=12;SRF=46;SRP=11.4848;SRR=67;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-367.767,0,-277.332:257:113:143:5108:4066:113,143	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr4	114260492	.	G	T	2004.60	.	AB=0.522293;ABP=3.68802;AC=1;AF=0.5;AN=2;AO=82;CIGAR=1X;DP=157;DPB=157;DPRA=0;EPP=4.70511;EPPR=3.73412;GTI=0;LEN=1;MEANALT=1;MQM=41.3293;MQMR=42;NS=1;NUMALT=1;ODDS=414.339;PAIRED=0.963415;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3031;QR=2839;RO=75;RPL=66;RPP=69.2137;RPPR=110.744;RPR=16;RUN=1;SAF=39;SAP=3.434;SAR=43;SF=12;SRF=37;SRP=3.03925;SRR=38;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-214.11,0,-198.637:157:75:82:3031:2839:75,82	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr4	114275243	.	C	T	4488.25	.	AB=0.423954;ABP=29.4313;AC=4;AF=0.5;AN=8;AO=223;CIGAR=1X;DP=1553;DPB=526;DPRA=0;EPP=4.18854;EPPR=9.89738;GTI=0;LEN=1;MEANALT=1;MQM=41.0673;MQMR=41.538;NS=1;NUMALT=1;ODDS=1208.68;PAIRED=0.977578;PAIREDR=0.990099;PAO=0;PQA=0;PQR=0;PRO=0;QA=8146;QR=10794;RO=303;RPL=84;RPP=32.4664;RPPR=24.6892;RPR=139;RUN=1;SAF=115;SAP=3.48744;SAR=108;SF=12,16,24,27;SRF=145;SRP=4.22145;SRR=158;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-537.975,0,-774.08:526:303:223:8146:10794:303,223	.	.	.	0/1:-521.394,0,-461.275:391:187:203:7367:6765:187,203	.	.	.	.	.	.	.	0/1:-303.517,0,-222.851:208:92:116:4271:3279:92,116	.	.	0/1:-479.576,0,-552.442:428:225:202:7073:7892:225,202	.	.	.	.	.	.	.	.	.
+chr4	114275600	.	C	T	2566.41	.	AB=0.424812;ABP=16.0718;AC=1;AF=0.5;AN=2;AO=113;CIGAR=1X;DP=266;DPB=266;DPRA=0;EPP=3.49071;EPPR=6.24594;GTI=0;LEN=1;MEANALT=3;MQM=38.8407;MQMR=38.6556;NS=1;NUMALT=1;ODDS=590.938;PAIRED=0.964602;PAIREDR=0.993377;PAO=0;PQA=0;PQR=0;PRO=0;QA=4252;QR=5327;RO=151;RPL=51;RPP=5.3355;RPPR=4.17513;RPR=62;RUN=1;SAF=45;SAP=13.1759;SAR=68;SF=0;SRF=55;SRP=27.1841;SRR=96;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	0/1:-265.807,0,-358.565:266:151:113:4252:5327:151,113	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr4	114276330	.	G	A	4226.85	.	AB=0.482249;ABP=3.93542;AC=1;AF=0.5;AN=2;AO=163;CIGAR=1X;DP=338;DPB=338;DPRA=0;EPP=8.88527;EPPR=21.8835;GTI=0;LEN=1;MEANALT=1;MQM=41.6442;MQMR=41.8857;NS=1;NUMALT=1;ODDS=973.268;PAIRED=1;PAIREDR=0.994286;PAO=0;PQA=0;PQR=0;PRO=0;QA=6207;QR=6594;RO=175;RPL=87;RPP=4.62225;RPPR=3.02271;RPR=76;RUN=1;SAF=70;SAP=10.0576;SAR=93;SF=20;SRF=74;SRP=12.056;SRR=101;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-431.203,0,-466.212:338:175:163:6207:6594:175,163	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr4	114276422	.	C	G	2339.32	.	AB=0.530726;ABP=4.47817;AC=1;AF=0.5;AN=2;AO=95;CIGAR=1X;DP=179;DPB=179;DPRA=0;EPP=27.9022;EPPR=29.4816;GTI=0;LEN=1;MEANALT=1;MQM=41.6211;MQMR=41.7262;NS=1;NUMALT=1;ODDS=453.163;PAIRED=1;PAIREDR=0.988095;PAO=0;PQA=0;PQR=0;PRO=0;QA=3441;QR=3037;RO=84;RPL=59;RPP=15.102;RPPR=17.9004;RPR=36;RUN=1;SAF=41;SAP=6.87324;SAR=54;SF=16;SRF=32;SRP=13.3506;SRR=52;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-244.674,0,-208.566:179:84:95:3441:3037:84,95	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr4	114276880	.	TTCAA	CTCAG	6079.16	.	AB=0.444109;ABP=20.9725;AC=4;AF=0.5;AN=8;AO=294;CIGAR=1X3M1X;DP=1952;DPB=662;DPRA=0;EPP=60.2072;EPPR=126.003;GTI=0;LEN=5;MEANALT=11;MQM=41.602;MQMR=41.8258;NS=1;NUMALT=1;ODDS=1646.08;PAIRED=0.996599;PAIREDR=0.983146;PAO=0;PQA=0;PQR=0;PRO=0;QA=10781;QR=13212;RO=356;RPL=196;RPP=73.9451;RPPR=52.4174;RPR=98;RUN=1;SAF=153;SAP=4.07388;SAR=141;SF=12,16,24,27;SRF=192;SRP=7.79242;SRR=164;TYPE=complex	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-736.769,0,-947.874:662:356:294:10781:13212:356,294	.	.	.	0/1:-628.522,0,-590.168:470:227:237:8796:8438:227,237	.	.	.	.	.	.	.	0/1:-340.946,0,-300.367:248:116:129:4794:4343:116,129	.	.	0/1:-797.283,0,-663.203:572:263:301:10991:9622:263,301	.	.	.	.	.	.	.	.	.
+chr4	114279422	.	A	G	4473.26	.	AB=0.463617;ABP=8.54056;AC=4;AF=0.5;AN=8;AO=223;CIGAR=1X;DP=1442;DPB=481;DPRA=0;EPP=4.18854;EPPR=3.01875;GTI=0;LEN=1;MEANALT=2;MQM=42;MQMR=41.7743;NS=1;NUMALT=1;ODDS=1265.55;PAIRED=1;PAIREDR=0.996109;PAO=0;PQA=0;PQR=0;PRO=0;QA=8207;QR=9326;RO=257;RPL=145;RPP=46.7221;RPPR=69.9373;RPR=78;RUN=1;SAF=82;SAP=36.9067;SAR=141;SF=12,16,24,27;SRF=88;SRP=58.4462;SRR=169;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-565.353,0,-661.283:481:257:223:8207:9326:257,223	.	.	.	0/1:-493.341,0,-465.407:367:179:187:7070:6684:179,187	.	.	.	.	.	.	.	0/1:-165.24,0,-215.549:148:82:66:2421:3000:82,66	.	.	0/1:-619.75,0,-489.908:446:204:241:8704:7213:204,241	.	.	.	.	.	.	.	.	.
+chr4	114279674	.	C	A	4650.53	.	AB=0.446556;ABP=13.455;AC=1;AF=0.5;AN=2;AO=188;CIGAR=1X;DP=421;DPB=421;DPRA=0;EPP=31.8863;EPPR=20.2423;GTI=0;LEN=1;MEANALT=1;MQM=41.867;MQMR=41.9828;NS=1;NUMALT=1;ODDS=1070.82;PAIRED=1;PAIREDR=0.995708;PAO=0;PQA=0;PQR=0;PRO=0;QA=7012;QR=8763;RO=233;RPL=110;RPP=14.8379;RPPR=29.1891;RPR=78;RUN=1;SAF=79;SAP=13.4056;SAR=109;SF=5;SRF=107;SRP=6.37468;SRR=126;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	0/1:-478.342,0,-629.854:421:233:188:7012:8763:233,188	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr4	114284645	.	C	T	1750.58	.	AB=0.527919;ABP=4.34405;AC=4;AF=0.5;AN=8;AO=104;CIGAR=1X;DP=535;DPB=197;DPRA=0;EPP=39.8418;EPPR=48.7056;GTI=0;LEN=1;MEANALT=2;MQM=42;MQMR=41.9565;NS=1;NUMALT=1;ODDS=496.948;PAIRED=1;PAIREDR=0.98913;PAO=0;PQA=0;PQR=0;PRO=0;QA=3868;QR=3334;RO=92;RPL=62;RPP=11.3621;RPPR=21.515;RPR=42;RUN=1;SAF=39;SAP=17.1249;SAR=65;SF=12,16,24,27;SRF=36;SRP=12.4515;SRR=56;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-275.848,0,-229.975:197:92:104:3868:3334:92,104	.	.	.	0/1:-154.217,0,-181.229:130:68:62:2227:2547:68,62	.	.	.	.	.	.	.	0/1:-71.3049,0,-62.9434:51:24:27:996:900:24,27	.	.	0/1:-242.447,0,-156.757:157:64:92:3332:2351:64,92	.	.	.	.	.	.	.	.	.
+chr4	114286357	.	ATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTGTGTC	ATGTGTGTGTGTGTGTGTGTGTGTGTGTGTTGTGTC,ATGTGTGTGTGTGTGTGTGTGTGTGTGTTGTGTC,ATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTGTGTC,ATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTGTGTC	731.02	.	AB=0.54902,0.215686;ABP=4.07475,38.8183;AC=18,6,1,1;AF=0.5,0.5;AN=26;AO=28,11;CIGAR=1M2D35M,1M4D33M;DP=697;DPB=47.6579;DPRA=0,0;EPP=3.32051,19.0002;EPPR=0;GTI=0;LEN=2,4;MEANALT=13,13;MQM=41.1786,40.7273;MQMR=0;NS=1;NUMALT=2;ODDS=17.2521;PAIRED=1,1;PAIREDR=0;PAO=0.333333,0.333333;PQA=7.33333,7.33333;PQR=7.33333;PRO=0.333333;QA=945,324;QR=0;RO=0;RPL=24,7;RPP=34.0313,4.78696;RPPR=0;RPR=4,4;RUN=1,1;SAF=11,6;SAP=5.80219,3.20771;SAR=17,5;SF=0,3,5,6,9,10,12,16,20,21,24,25,27;SRF=0;SRP=0;SRR=0;TYPE=del,del	GT:GL:DP:RO:AO:QA:QR:AD	1/2:-97.8178,-25.0497,-15.7178,-73.7398,0,-69.5254,.,.,.,.,.,.,.,.,.:51:0:28,11,.,.:945,324,.,.:0:0,28,11	.	.	1/1:-133.813,-13.6297,0,.,.,.,.,.,.,.,.,.,.,.,.:76:1:51,.,.,.:1576,.,.,.:37:1,51	.	1/1:-97.3983,-8.68561,0,.,.,.,.,.,.,.,.,.,.,.,.:61:3:39,.,.,.:1215,.,.,.:104:3,39	1/2:-42.5776,-13.6088,-12.1149,-27.1931,0,-27.5043,.,.,.,.,.,.,.,.,.:26:1:12,6,.,.:380,200,.,.:27:1,12,6	.	.	1/2:-70.3246,-20.0641,-13.7424,-50.2893,0,-46.9779,.,.,.,.,.,.,.,.,.:49:0:21,11,.,.:646,271,.,.:0:0,21,11	1/2:-91.8382,-23.1461,-7.79353,-74.7596,0,-65.067,.,.,.,.,.,.,.,.,.:55:0:31,12,.,.:963,306,.,.:0:0,31,12	.	1/1:-68.444,-9.0309,0,.,.,.,.,.,.,.,.,.,.,.,.:57:0:26,.,.,.:789,.,.,.:0:0,26	.	.	.	1/4:-40.262,-18.9527,-12.1747,.,.,.,.,.,.,.,-24.7868,0,.,.,-18.9116:47:1:12,.,.,9:357,.,.,282:36:1,12,9	.	.	.	1/2:-206.439,-48.8823,-28.4122,-158.532,0,-151.608,.,.,.,.,.,.,.,.,.:101:0:65,20,.,.:2040,632,.,.:0:0,65,20	1/1:-32.7744,-3.61236,0,.,.,.,.,.,.,.,.,.,.,.,.:19:0:12,.,.,.:373,.,.,.:0:0,12	.	.	1/3:-17.3597,-3.18917,-3.52201,.,.,.,-12.6481,0,.,-13.5773,.,.,.,.,.:15:1:5,.,3,.:184,.,68,.:36:1,5,3	1/2:-125.039,-36.7252,-26.5885,-87.3679,0,-83.2505,.,.,.,.,.,.,.,.,.:72:1:38,18,.,.:1156,507,.,.:28:1,38,18	.	1/1:-50.9827,-3.26312,0,.,.,.,.,.,.,.,.,.,.,.,.:68:2:24,.,.,.:650,.,.,.:65:2,24	.	.	.	.	.	.	.	.	.
+chr4	114294308	.	T	C	3723.68	.	AB=0.575521;ABP=22.0333;AC=4;AF=0.5;AN=8;AO=221;CIGAR=1X;DP=1094;DPB=384;DPRA=0;EPP=24.7152;EPPR=12.722;GTI=0;LEN=1;MEANALT=1;MQM=41.991;MQMR=41.8896;NS=1;NUMALT=1;ODDS=883.88;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=7989;QR=5939;RO=163;RPL=168;RPP=132.955;RPPR=52.5812;RPR=53;RUN=1;SAF=118;SAP=5.22108;SAR=103;SF=12,16,24,27;SRF=89;SRP=6.00773;SRR=74;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-579.012,0,-399.089:384:163:221:7989:5939:163,221	.	.	.	0/1:-376.197,0,-292.372:258:114:143:5219:4277:114,143	.	.	.	.	.	.	.	0/1:-209.381,0,-119.192:127:49:78:2846:1811:49,78	.	.	0/1:-387.971,0,-416.085:325:163:158:5579:5920:163,158	.	.	.	.	.	.	.	.	.
+chr4	120079159	.	A	G	1012.67	.	AB=0.465753;ABP=3.75395;AC=14;AF=0.5;AN=22;AO=34;CIGAR=1X;DP=700;DPB=73;DPRA=0;EPP=3.26577;EPPR=9.74743;GTI=0;LEN=1;MEANALT=1;MQM=41.9412;MQMR=42;NS=1;NUMALT=1;ODDS=171.968;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1223;QR=1419;RO=39;RPL=5;RPP=39.7976;RPPR=49.8362;RPR=29;RUN=1;SAF=19;SAP=4.03217;SAR=15;SF=0,5,6,9,10,12,16,20,21,24,27;SRF=19;SRP=3.06598;SRR=20;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	0/1:-84.4384,0,-101.377:73:39:34:1223:1419:39,34	.	.	.	.	1/1:-221.073,-20.7711,0:69:0:69:2594:0:0,69	0/1:-49.1222,0,-69.2486:45:25:20:719:954:25,20	.	.	0/1:-52.5918,0,-56.7633:42:21:21:751:799:21,21	0/1:-122.487,0,-68.0844:73:28:45:1668:1037:28,45	.	0/1:-97.6663,0,-88.3572:73:36:37:1389:1268:36,37	.	.	.	0/1:-86.1611,0,-130.284:82:48:34:1281:1814:48,34	.	.	.	1/1:-241.706,-22.8783,0:76:0:76:2852:0:0,76	1/1:-134.684,-12.6433,0:42:0:42:1553:0:0,42	.	.	0/1:-44.467,0,-62.6935:40:23:17:650:858:23,17	.	.	0/1:-99.7462,0,-121.362:85:46:39:1448:1694:46,39	.	.	.	.	.	.	.	.	.
+chr4	120085448	.	A	G	2860.24	.	AB=0.457014;ABP=6.55737;AC=3;AF=0.5;AN=6;AO=101;CIGAR=1X;DP=804;DPB=221;DPRA=0;EPP=18.6836;EPPR=36.7502;GTI=0;LEN=1;MEANALT=2;MQM=41.9604;MQMR=41.9832;NS=1;NUMALT=1;ODDS=545.813;PAIRED=1;PAIREDR=0.991597;PAO=0;PQA=0;PQR=0;PRO=0;QA=3591;QR=4417;RO=119;RPL=50;RPP=3.0318;RPPR=14.4151;RPR=51;RUN=1;SAF=45;SAP=5.61177;SAR=56;SF=0,3,27;SRF=63;SRP=3.90444;SRR=56;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	0/1:-245.767,0,-316.014:221:119:101:3591:4417:119,101	.	.	0/1:-257.969,0,-314.825:224:120:104:3745:4409:120,104	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-381.533,0,-521.896:359:200:158:5642:7272:200,158	.	.	.	.	.	.	.	.	.
+chr4	186064502	.	G	A	757.61	.	AB=0.584906;ABP=6.32897;AC=1;AF=0.5;AN=2;AO=31;CIGAR=1X;DP=53;DPB=53;DPRA=0;EPP=6.44263;EPPR=4.58955;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=42;NS=1;NUMALT=1;ODDS=99.2224;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1166;QR=798;RO=22;RPL=4;RPP=40.0654;RPPR=50.7827;RPR=27;RUN=1;SAF=19;SAP=6.44263;SAR=12;SF=27;SRF=13;SRP=4.58955;SRR=9;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-85.3457,0,-53.9526:53:22:31:1166:798:22,31	.	.	.	.	.	.	.	.	.
+chr4	186066373	.	T	C	1040.67	.	AB=0.445545;ABP=5.61177;AC=1;AF=0.5;AN=2;AO=45;CIGAR=1X;DP=101;DPB=101;DPRA=0;EPP=5.37479;EPPR=6.88793;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=42;NS=1;NUMALT=1;ODDS=239.624;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1625;QR=2048;RO=56;RPL=27;RPP=6.91895;RPPR=5.49198;RPR=18;RUN=1;SAF=19;SAP=5.37479;SAR=26;SF=10;SRF=27;SRP=3.16541;SRR=29;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	0/1:-111.057,0,-147.03:101:56:45:1625:2048:56,45	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr4	186423637	.	G	A	5004.58	.	AB=0;ABP=0;AC=21;AF=1;AN=22;AO=154;CIGAR=1X;DP=1869;DPB=154;DPRA=0;EPP=19.3104;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=41.4286;MQMR=0;NS=1;NUMALT=1;ODDS=218.095;PAIRED=0.993506;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=5396;QR=0;RO=0;RPL=115;RPP=84.4546;RPPR=0;RPR=39;RUN=1;SAF=63;SAP=14.0651;SAR=91;SF=3,5,6,9,10,12,16,21,24,25,27;SRF=0;SRP=0;SRR=0;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	1/1:-466.631,-46.3586,0:154:0:154:5396:0:0,154	.	1/1:-504.417,-47.8638,0:161:0:159:5846:0:0,159	1/1:-388.947,-37.0267,0:123:0:123:4491:0:0,123	.	.	1/1:-421.538,-40.037,0:133:0:133:4853:0:0,133	1/1:-511.178,-49.3689,0:165:0:164:5925:0:0,164	.	1/1:-693.203,-67.4307,0:224:0:224:8157:0:0,224	.	.	.	1/1:-518.243,-48.1648,0:162:0:160:6004:0:0,160	.	.	.	.	0/1:-149.597,0,-83.6188:95:37:58:2047:1298:37,58	.	.	1/1:-333.002,-31.6082,0:105:0:105:3839:0:0,105	1/1:-894.497,-88.2018,0:295:0:293:10328:0:0,293	.	1/1:-766.364,-75.5585,0:252:0:251:8860:0:0,251	.	.	.	.	.	.	.	.	.
+chr4	186423655	.	G	A	1793.99	.	AB=0.522936;ABP=3.50834;AC=5;AF=0.5;AN=10;AO=57;CIGAR=1X;DP=756;DPB=109;DPRA=0;EPP=49.6779;EPPR=16.5402;GTI=0;LEN=1;MEANALT=1;MQM=41.2281;MQMR=41.2692;NS=1;NUMALT=1;ODDS=273.182;PAIRED=1;PAIREDR=0.980769;PAO=0;PQA=0;PQR=0;PRO=0;QA=2136;QR=1874;RO=52;RPL=35;RPP=9.44853;RPPR=19.7139;RPR=22;RUN=1;SAF=24;SAP=6.09608;SAR=33;SF=3,5,21,25,27;SRF=19;SRP=11.1951;SRR=33;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	0/1:-150.494,0,-128.529:109:52:57:2136:1874:52,57	.	0/1:-156.023,0,-155.445:119:59:60:2240:2212:59,60	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-67.2493,0,-137.888:80:52:28:1053:1880:52,28	.	.	.	0/1:-310.545,0,-326.954:247:127:120:4477:4646:127,120	.	0/1:-272.819,0,-245.324:201:95:105:3884:3542:95,105	.	.	.	.	.	.	.	.	.
+chr4	186446257	.	G	A	1819.02	.	AB=0.408867;ABP=17.6544;AC=1;AF=0.5;AN=2;AO=83;CIGAR=1X;DP=203;DPB=203;DPRA=0;EPP=3.66436;EPPR=8.28388;GTI=0;LEN=1;MEANALT=2;MQM=41.9518;MQMR=41.9832;NS=1;NUMALT=1;ODDS=418.845;PAIRED=1;PAIREDR=0.991597;PAO=0;PQA=0;PQR=0;PRO=0;QA=2908;QR=4405;RO=119;RPL=26;RPP=28.1523;RPPR=58.2095;RPR=57;RUN=1;SAF=46;SAP=5.12945;SAR=37;SF=3;SRF=72;SRP=14.4151;SRR=47;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	0/1:-192.542,0,-320.707:203:119:83:2908:4405:119,83	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr4	186456617	.	A	G	1596.42	.	AB=0;ABP=0;AC=26;AF=1;AN=26;AO=52;CIGAR=1X;DP=752;DPB=52;DPRA=0;EPP=5.68288;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=0;NS=1;NUMALT=1;ODDS=76.6925;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1941;QR=0;RO=0;RPL=52;RPP=115.927;RPPR=0;RPR=0;RUN=1;SAF=22;SAP=5.68288;SAR=30;SF=0,3,5,6,9,10,12,16,20,21,24,25,27;SRF=0;SRP=0;SRR=0;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	1/1:-168.459,-15.6536,0:52:0:52:1941:0:0,52	.	.	1/1:-135.213,-12.9443,0:43:0:43:1555:0:0,43	.	1/1:-213.367,-19.868,0:66:0:66:2458:0:0,66	1/1:-157.289,-15.0515,0:50:0:50:1806:0:0,50	.	.	1/1:-166.7,-15.9546,0:54:0:53:1921:0:0,53	1/1:-211.718,-21.3731,0:71:0:71:2475:0:0,71	.	1/1:-265.521,-26.1896,0:87:0:87:3053:0:0,87	.	.	.	1/1:-181.088,-14.581,0:58:1:57:2121:29:1,57	.	.	.	1/1:-263.344,-24.9855,0:83:0:83:3065:0:0,83	1/1:-62.7826,-6.32163,0:21:0:21:718:0:0,21	.	.	1/1:-82.8828,-8.12781,0:27:0:27:944:0:0,27	1/1:-248.158,-23.4803,0:78:0:78:2856:0:0,78	.	1/1:-188.346,-18.6639,0:62:0:62:2179:0:0,62	.	.	.	.	.	.	.	.	.
+chr5	223646	.	A	T	1277.39	.	AB=0.47079;ABP=5.16685;AC=1;AF=0.5;AN=2;AO=137;CIGAR=1X;DP=291;DPB=291;DPRA=0;EPP=10.0002;EPPR=3.0667;GTI=0;LEN=1;MEANALT=1;MQM=18.4599;MQMR=29.9481;NS=1;NUMALT=1;ODDS=294.13;PAIRED=0.992701;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=5136;QR=5771;RO=154;RPL=56;RPP=12.9167;RPPR=5.04077;RPR=81;RUN=1;SAF=74;SAP=4.92817;SAR=63;SF=12;SRF=77;SRP=3.0103;SRR=77;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-136.662,0,-308.918:291:154:137:5136:5771:154,137	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr5	224633	.	A	G	292.47	.	AB=0.433735;ABP=9.34158;AC=4;AF=0.5;AN=8;AO=72;CIGAR=1X;DP=915;DPB=166;DPRA=0;EPP=6.02623;EPPR=4.48875;GTI=0;LEN=1;MEANALT=1;MQM=13.6389;MQMR=30.1383;NS=1;NUMALT=1;ODDS=51.5048;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2667;QR=3483;RO=94;RPL=61;RPP=78.4086;RPPR=116.204;RPR=11;RUN=1;SAF=32;SAP=4.9405;SAR=40;SF=0,5,16,25;SRF=41;SRP=6.33681;SRR=53;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	0/1:-37.9476,0,-193.511:166:94:72:2667:3483:94,72	.	.	.	.	0/1:-53.5096,0,-308.645:268:153:115:4083:5711:153,115	.	.	.	.	.	.	.	.	.	.	0/1:-51.022,0,-204.322:212:112:98:3496:4041:112,98	.	.	.	.	.	.	.	.	0/1:-47.8157,0,-293.321:269:157:111:4020:5658:157,111	.	.	.	.	.	.	.	.	.	.	.
+chr5	226160	.	A	C	433.39	.	AB=0.461538;ABP=4.17955;AC=4;AF=0.5;AN=8;AO=42;CIGAR=1X;DP=414;DPB=91;DPRA=0;EPP=4.87156;EPPR=4.6389;GTI=0;LEN=1;MEANALT=2;MQM=20.5952;MQMR=28.0417;NS=1;NUMALT=1;ODDS=86.3589;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1454;QR=1747;RO=48;RPL=35;RPP=43.5445;RPPR=14.5915;RPR=7;RUN=1;SAF=13;SAP=16.2459;SAR=29;SF=0,5,16,25;SRF=15;SRP=17.6677;SRR=33;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	0/1:-49.2108,0,-87.1106:91:48:42:1454:1747:48,42	.	.	.	.	0/1:-41.9309,0,-91.7397:91:49:42:1518:1742:49,42	.	.	.	.	.	.	.	.	.	.	0/1:-53.5637,0,-76.6138:87:42:45:1658:1546:42,45	.	.	.	.	.	.	.	.	0/1:-74.3281,0,-133.668:145:75:70:2503:2689:75,70	.	.	.	.	.	.	.	.	.	.	.
+chr5	228362	.	T	C	453.14	.	AB=0.536913;ABP=6.53712;AC=4;AF=0.5;AN=8;AO=160;CIGAR=1X;DP=1394;DPB=298;DPRA=0;EPP=51.8684;EPPR=54.5075;GTI=0;LEN=1;MEANALT=2;MQM=10.1062;MQMR=28.9781;NS=1;NUMALT=1;ODDS=39.1605;PAIRED=0.99375;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=5774;QR=5226;RO=137;RPL=136;RPP=173.254;RPPR=134.266;RPR=24;RUN=1;SAF=46;SAP=65.7659;SAR=114;SF=0,5,16,25;SRF=41;SRP=50.957;SRR=96;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	0/1:-54.3879,0,-258.97:298:137:160:5774:5226:137,160	.	.	.	.	0/1:-76.1954,0,-285.614:339:156:182:6695:5755:156,182	.	.	.	.	.	.	.	.	.	.	0/1:-103.531,0,-211.249:288:121:167:6181:4585:121,167	.	.	.	.	.	.	.	.	0/1:-71.7417,0,-448.689:469:244:225:8307:9127:244,225	.	.	.	.	.	.	.	.	.	.	.
+chr5	230980	.	A	G	4613.43	.	AB=0;ABP=0;AC=21;AF=1;AN=24;AO=260;CIGAR=1X;DP=3185;DPB=260;DPRA=0;EPP=12.665;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=22.25;MQMR=0;NS=1;NUMALT=1;ODDS=365.042;PAIRED=0.984615;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=9875;QR=0;RO=0;RPL=78;RPP=93.3436;RPPR=0;RPR=182;RUN=1;SAF=157;SAP=27.3642;SAR=103;SF=0,5,6,9,10,12,16,20,21,24,25,27;SRF=0;SRP=0;SRR=0;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	1/1:-512.795,-78.2678,0:260:0:260:9875:0:0,260	.	.	.	.	1/1:-609.659,-94.2224,0:313:0:313:11880:0:0,313	1/1:-386.064,-54.0977,0:191:1:190:7187:37:1,190	.	.	1/1:-481.906,-70.14,0:233:0:233:8826:0:0,233	1/1:-553.42,-83.6863,0:279:0:278:10386:0:0,278	.	1/1:-722.1,-108.973,0:362:0:362:13622:0:0,362	.	.	.	1/1:-579.929,-88.8039,0:295:0:295:11133:0:0,295	.	.	.	1/1:-747.16,-114.382,0:385:1:383:14404:15:1,383	0/1:-56.57,0,-87.0288:74:37:37:1378:1338:37,37	.	.	0/1:-83.2057,0,-121.929:113:55:58:2222:2030:55,58	1/1:-706.138,-104.156,0:346:0:346:13006:0:0,346	.	0/1:-257.375,0,-329.109:334:150:184:6876:5620:150,184	.	.	.	.	.	.	.	.	.
+chr5	231111	.	T	C	2691.43	.	AB=0;ABP=0;AC=17;AF=1;AN=22;AO=219;CIGAR=1X;DP=2578;DPB=221;DPRA=0;EPP=5.24126;EPPR=0;GTI=0;LEN=1;MEANALT=2;MQM=19.1324;MQMR=0;NS=1;NUMALT=1;ODDS=308.204;PAIRED=0.995434;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=8040;QR=0;RO=0;RPL=178;RPP=189.112;RPPR=0;RPR=41;RUN=1;SAF=96;SAP=10.2386;SAR=123;SF=0,5,6,9,10,12,16,20,24,25,27;SRF=0;SRP=0;SRR=0;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	1/1:-371.816,-65.9256,0:221:0:219:8040:0:0,219	.	.	.	.	1/1:-435.809,-78.2678,0:261:0:260:9652:0:0,260	1/1:-287.322,-46.0576,0:153:0:153:5524:0:0,153	.	.	0/1:-150.64,0,-126.887:192:78:114:4250:2864:78,114	1/1:-363.125,-59.6039,0:198:0:198:7311:0:0,198	.	1/1:-590.664,-101.447,0:337:0:337:12415:0:0,337	.	.	.	0/1:-88.8731,0,-221.102:220:118:102:3743:4421:118,102	.	.	.	1/1:-507.015,-85.7936,0:285:0:285:10457:0:0,285	.	.	.	0/1:-42.4027,0,-150.441:110:67:42:1579:2491:67,42	0/1:-155.489,0,-245.084:285:130:155:5564:4849:130,155	.	0/1:-195.101,0,-324.044:316:154:161:5855:5564:154,161	.	.	.	.	.	.	.	.	.
+chr5	231143	.	T	C	593.55	.	AB=0.432258;ABP=9.18849;AC=4;AF=0.5;AN=8;AO=67;CIGAR=1X;DP=688;DPB=155;DPRA=0;EPP=12.3768;EPPR=6.56362;GTI=0;LEN=1;MEANALT=1;MQM=17.5224;MQMR=22.8977;NS=1;NUMALT=1;ODDS=100.872;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2411;QR=3131;RO=88;RPL=53;RPP=52.306;RPPR=91.8433;RPR=14;RUN=1;SAF=28;SAP=6.93191;SAR=39;SF=0,5,16,25;SRF=36;SRP=9.32731;SRR=52;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	0/1:-57.1424,0,-129.158:155:88:67:2411:3131:88,67	.	.	.	.	0/1:-74.2072,0,-136.04:174:94:80:2902:3402:94,80	.	.	.	.	.	.	.	.	.	.	0/1:-60.2797,0,-162.991:148:82:65:2373:3042:82,65	.	.	.	.	.	.	.	.	0/1:-110.84,0,-200.177:211:104:106:3813:3739:104,106	.	.	.	.	.	.	.	.	.	.	.
+chr5	233734	.	C	G	849.72	.	AB=0.580645;ABP=15.2686;AC=4;AF=0.5;AN=8;AO=126;CIGAR=1X;DP=986;DPB=217;DPRA=0;EPP=14.6604;EPPR=15.6335;GTI=0;LEN=1;MEANALT=1;MQM=14.9524;MQMR=29.2967;NS=1;NUMALT=1;ODDS=213.152;PAIRED=0.992063;PAIREDR=0.989011;PAO=0;PQA=0;PQR=0;PRO=0;QA=4691;QR=3402;RO=91;RPL=76;RPP=14.6604;RPPR=39.3049;RPR=50;RUN=1;SAF=58;SAP=4.73369;SAR=68;SF=0,5,16,25;SRF=39;SRP=7.04303;SRR=52;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	0/1:-103.009,0,-167.287:217:91:126:4691:3402:91,126	.	.	.	.	0/1:-96.9475,0,-216.628:249:117:132:4956:4292:117,132	.	.	.	.	.	.	.	.	.	.	0/1:-63.524,0,-209.639:207:108:99:3686:4051:108,99	.	.	.	.	.	.	.	.	0/1:-118.908,0,-277.724:313:145:168:6201:5356:145,168	.	.	.	.	.	.	.	.	.	.	.
+chr5	251541	.	A	G	805.04	.	AB=0.45993;ABP=7.01277;AC=4;AF=0.5;AN=8;AO=132;CIGAR=1X;DP=1625;DPB=287;DPRA=0;EPP=14.1309;EPPR=25.5711;GTI=0;LEN=1;MEANALT=2;MQM=12.7121;MQMR=25.4805;NS=1;NUMALT=1;ODDS=121.824;PAIRED=1;PAIREDR=0.987013;PAO=0;PQA=0;PQR=0;PRO=0;QA=4844;QR=5590;RO=154;RPL=45;RPP=32.0291;RPPR=3.91273;RPR=87;RUN=1;SAF=66;SAP=3.0103;SAR=66;SF=0,5,16,25;SRF=80;SRP=3.51792;SRR=74;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	0/1:-64.1187,0,-252.09:287:154:132:4844:5590:154,132	.	.	.	.	0/1:-128.69,0,-363.639:474:238:236:8591:8658:238,236	.	.	.	.	.	.	.	.	.	.	0/1:-66.5002,0,-291.655:334:179:154:5473:6538:179,154	.	.	.	.	.	.	.	.	0/1:-113.837,0,-469.637:530:280:250:8802:10195:280,250	.	.	.	.	.	.	.	.	.	.	.
+chr5	256472	.	G	A	947.55	.	AB=0.492754;ABP=3.10471;AC=4;AF=0.5;AN=8;AO=102;CIGAR=1X;DP=1052;DPB=207;DPRA=0;EPP=3.7767;EPPR=7.66346;GTI=0;LEN=1;MEANALT=1;MQM=16.7255;MQMR=29.8857;NS=1;NUMALT=1;ODDS=176.394;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3755;QR=3819;RO=105;RPL=41;RPP=11.5259;RPPR=31.3222;RPR=61;RUN=1;SAF=53;SAP=3.35092;SAR=49;SF=0,5,16,25;SRF=52;SRP=3.03098;SRR=53;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	0/1:-84.1416,0,-203.082:207:105:102:3755:3819:105,102	.	.	.	.	0/1:-115.713,0,-238.915:291:120:171:6324:4382:120,171	.	.	.	.	.	.	.	.	.	.	0/1:-83.9636,0,-196.196:241:104:137:5181:3842:104,137	.	.	.	.	.	.	.	.	0/1:-138.383,0,-254.391:313:138:175:6424:4817:138,175	.	.	.	.	.	.	.	.	.	.	.
+chr5	256509	.	G	A	937.79	.	AB=0.470588;ABP=5.18177;AC=4;AF=0.5;AN=8;AO=136;CIGAR=1X;DP=1467;DPB=289;DPRA=0;EPP=4.03217;EPPR=4.4389;GTI=0;LEN=1;MEANALT=2;MQM=15.2279;MQMR=29.1974;NS=1;NUMALT=1;ODDS=182.389;PAIRED=0.992647;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=4928;QR=5367;RO=152;RPL=41;RPP=49.5692;RPPR=81.2405;RPR=95;RUN=1;SAF=65;SAP=3.5851;SAR=71;SF=0,5,16,25;SRF=74;SRP=3.23888;SRR=78;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	0/1:-91.1361,0,-285.123:289:152:136:4928:5367:152,136	.	.	.	.	0/1:-106.6,0,-407.104:426:237:189:6807:8429:237,189	.	.	.	.	.	.	.	.	.	.	0/1:-86.4281,0,-257.483:297:160:137:5066:5704:160,137	.	.	.	.	.	.	.	.	0/1:-148.353,0,-365.903:455:228:226:7969:7865:228,226	.	.	.	.	.	.	.	.	.	.	.
+chr5	37294473	.	T	C	1582.11	.	AB=0.483516;ABP=3.22506;AC=7;AF=0.5;AN=14;AO=44;CIGAR=1X;DP=862;DPB=91;DPRA=0;EPP=15.6443;EPPR=36.6912;GTI=0;LEN=1;MEANALT=1;MQM=41.1818;MQMR=41.1277;NS=1;NUMALT=1;ODDS=238.45;PAIRED=0.977273;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1617;QR=1684;RO=47;RPL=16;RPP=10.1169;RPPR=8.60069;RPR=28;RUN=1;SAF=24;SAP=3.79993;SAR=20;SF=0,3,6,10,12,16,25;SRF=26;SRP=4.16534;SRR=21;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	0/1:-111.467,0,-116.78:91:47:44:1617:1684:47,44	.	.	0/1:-140.018,0,-98.8236:94:42:52:1944:1471:42,52	.	.	0/1:-130.553,0,-113.472:97:45:52:1848:1644:45,52	.	.	.	0/1:-157.972,0,-122.823:109:50:59:2202:1787:50,59	.	0/1:-214.904,0,-209.523:168:85:83:3059:2985:85,83	.	.	.	0/1:-160.649,0,-123.215:113:52:61:2245:1799:52,61	.	.	.	.	.	.	.	.	0/1:-253.139,0,-230.015:190:92:98:3577:3314:92,98	.	.	.	.	.	.	.	.	.	.	.
+chr5	37307389	.	T	C	1276.64	.	AB=0.455172;ABP=5.54119;AC=1;AF=0.5;AN=2;AO=66;CIGAR=1X;DP=145;DPB=145;DPRA=0;EPP=55.6521;EPPR=31.5964;GTI=0;LEN=1;MEANALT=3;MQM=41.0909;MQMR=40.9589;NS=1;NUMALT=1;ODDS=293.958;PAIRED=0.984848;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2107;QR=2278;RO=73;RPL=32;RPP=3.1419;RPPR=3.75395;RPR=34;RUN=1;SAF=43;SAP=16.1707;SAR=23;SF=25;SRF=55;SRP=43.7328;SRR=18;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-140.816,0,-156.222:145:73:66:2107:2278:73,66	.	.	.	.	.	.	.	.	.	.	.
+chr5	37309371	.	TAGAAGAGG	TAGAGG	985.57	.	AB=0.397436;ABP=10.1372;AC=7;AF=0.5;AN=14;AO=31;CIGAR=1M3D5M;DP=704;DPB=67.6667;DPRA=0;EPP=11.486;EPPR=12.2627;GTI=0;LEN=3;MEANALT=2;MQM=42;MQMR=41.913;NS=1;NUMALT=1;ODDS=129.529;PAIRED=1;PAIREDR=0.978261;PAO=0;PQA=0;PQR=0;PRO=0;QA=1016;QR=1653;RO=46;RPL=24;RPP=23.254;RPPR=71.1757;RPR=7;RUN=1;SAF=14;SAP=3.64073;SAR=17;SF=0,3,6,10,12,16,25;SRF=26;SRP=4.70971;SRR=20;TYPE=del	GT:GL:DP:RO:AO:QA:QR:AD	0/1:-65.432,0,-120.943:78:46:31:1016:1653:46,31	.	.	0/1:-90.7291,0,-84.8995:71:33:37:1286:1219:33,37	.	.	0/1:-92.1349,0,-112.673:84:44:40:1349:1578:44,40	.	.	.	0/1:-128.827,0,-108.598:96:43:51:1811:1572:43,51	.	0/1:-118.144,0,-112.791:96:45:50:1684:1640:45,50	.	.	.	0/1:-93.4043,0,-129.86:90:49:40:1385:1804:49,40	.	.	.	.	.	.	.	.	0/1:-199.471,0,-254.65:189:98:89:2941:3577:98,89	.	.	.	.	.	.	.	.	.	.	.
+chr5	37333727	.	A	G	558.43	.	AB=0.408451;ABP=8.17902;AC=9;AF=0.5;AN=18;AO=29;CIGAR=1X;DP=536;DPB=71;DPRA=0;EPP=3.08518;EPPR=13.1438;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=41.5476;NS=1;NUMALT=1;ODDS=144.5;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1074;QR=1580;RO=42;RPL=24;RPP=30.0414;RPPR=55.9529;RPR=5;RUN=1;SAF=10;SAP=9.07545;SAR=19;SF=0,5,9,10,12,20,21,24,25;SRF=9;SRP=32.7905;SRR=33;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	0/1:-72.2167,0,-115.433:71:42:29:1074:1580:42,29	.	.	.	.	0/1:-61.4677,0,-101.92:64:37:27:924:1397:37,27	.	.	.	0/1:-71.2981,0,-64.341:53:25:28:998:924:25,28	0/1:-69.8233,0,-95.071:63:35:28:1017:1312:35,28	.	0/1:-87.4393,0,-94.1452:72:37:35:1268:1333:37,35	.	.	.	.	.	.	.	0/1:-60.0034,0,-80.5976:54:30:24:882:1128:30,24	0/1:-36.8874,0,-90.3484:50:33:17:588:1214:33,17	.	.	0/1:-40.7347,0,-30.3521:27:12:15:559:438:12,15	0/1:-87.0143,0,-119.634:82:46:36:1284:1662:46,36	.	.	.	.	.	.	.	.	.	.	.
+chr5	37341352	.	T	C	2024.88	.	AB=0.533333;ABP=4.31318;AC=4;AF=0.5;AN=8;AO=72;CIGAR=1X;DP=659;DPB=135;DPRA=0;EPP=6.02623;EPPR=18.2106;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=42;NS=1;NUMALT=1;ODDS=353.437;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2638;QR=2356;RO=63;RPL=46;RPP=15.074;RPPR=24.5527;RPR=26;RUN=1;SAF=25;SAP=17.6074;SAR=47;SF=0,6,12,25;SRF=25;SRP=8.83536;SRR=38;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	0/1:-188.969,0,-164.067:135:63:72:2638:2356:63,72	.	.	.	.	.	0/1:-190.317,0,-174.179:140:68:72:2677:2491:68,72	.	.	.	.	.	0/1:-216.811,0,-225.055:176:87:88:3141:3200:87,88	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-260.792,0,-267.154:208:103:102:3718:3790:103,102	.	.	.	.	.	.	.	.	.	.	.
+chr5	37348573	.	C	A	1334.59	.	AB=0.45082;ABP=5.57335;AC=1;AF=0.5;AN=2;AO=55;CIGAR=1X;DP=122;DPB=122;DPRA=0;EPP=11.8936;EPPR=17.3031;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=41.9104;NS=1;NUMALT=1;ODDS=307.302;PAIRED=0.981818;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2085;QR=2523;RO=67;RPL=21;RPP=9.68264;RPPR=26.6372;RPR=34;RUN=1;SAF=39;SAP=23.8959;SAR=16;SF=0;SRF=39;SRP=6.93191;SRR=28;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	0/1:-143.424,0,-181.616:122:67:55:2085:2523:67,55	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr5	37350390	.	C	A	872.80	.	AB=0.423913;ABP=7.63648;AC=8;AF=0.5;AN=16;AO=39;CIGAR=1X;DP=711;DPB=92;DPRA=0;EPP=9.74743;EPPR=6.32897;GTI=0;LEN=1;MEANALT=1;MQM=41.9487;MQMR=42;NS=1;NUMALT=1;ODDS=204.756;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1447;QR=2004;RO=53;RPL=29;RPP=23.1103;RPPR=42.3836;RPR=10;RUN=1;SAF=19;SAP=3.06598;SAR=20;SF=5,9,10,12,20,21,24,25;SRF=20;SRP=9.93443;SRR=33;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	0/1:-97.8651,0,-146.127:92:53:39:1447:2004:53,39	.	.	.	0/1:-101.067,0,-67.903:64:27:37:1387:999:27,37	0/1:-67.9384,0,-136.489:78:50:28:1056:1841:50,28	.	0/1:-150.265,0,-152.439:115:59:56:2139:2151:59,56	.	.	.	.	.	.	.	0/1:-107.728,0,-153.921:100:58:42:1593:2117:58,42	0/1:-17.2402,0,-186.512:82:68:14:478:2433:68,14	.	.	0/1:-51.1073,0,-62.1439:45:25:20:745:867:25,20	0/1:-190.681,0,-150.631:135:60:74:2662:2203:60,74	.	.	.	.	.	.	.	.	.	.	.
+chr5	37364443	.	C	T	5975.85	.	AB=0;ABP=0;AC=26;AF=1;AN=26;AO=160;CIGAR=1X;DP=2441;DPB=161;DPRA=0;EPP=5.67035;EPPR=0;GTI=0;LEN=1;MEANALT=2;MQM=41.7188;MQMR=0;NS=1;NUMALT=1;ODDS=226.412;PAIRED=0.9875;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=6054;QR=0;RO=0;RPL=95;RPP=15.2248;RPPR=0;RPR=65;RUN=1;SAF=90;SAP=8.43898;SAR=70;SF=0,3,5,6,9,10,12,16,20,21,24,25,27;SRF=0;SRP=0;SRR=0;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	1/1:-519.979,-48.1648,0:161:0:160:6054:0:0,160	.	.	1/1:-559.296,-51.7772,0:172:0:172:6505:0:0,172	.	1/1:-661.565,-60.8081,0:202:0:202:7656:0:0,202	1/1:-404.908,-37.6288,0:126:0:125:4702:0:0,125	.	.	1/1:-472.481,-44.2514,0:149:0:147:5485:0:0,147	1/1:-565.156,-52.3792,0:174:0:174:6603:0:0,174	.	1/1:-774.105,-73.4513,0:244:0:244:9042:0:0,244	.	.	.	1/1:-730.304,-67.4307,0:224:0:224:8478:0:0,224	.	.	.	1/1:-748,-68.9359,0:229:0:229:8703:0:0,229	1/1:-311.988,-29.5009,0:98:0:98:3595:0:0,98	.	.	1/1:-290.993,-27.0927,0:90:0:90:3388:0:0,90	1/1:-899.622,-86.0946,0:289:0:286:10546:0:0,286	.	1/1:-899.532,-85.1915,0:283:0:283:10503:0:0,283	.	.	.	.	.	.	.	.	.
+chr5	155771579	.	T	C	7452.23	.	AB=0.46395;ABP=6.61127;AC=13;AF=0.5;AN=20;AO=148;CIGAR=1X;DP=3617;DPB=319;DPRA=0;EPP=18.0345;EPPR=5.51388;GTI=0;LEN=1;MEANALT=2;MQM=41.9189;MQMR=41.9765;NS=1;NUMALT=1;ODDS=842.203;PAIRED=0.986486;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=5445;QR=6445;RO=170;RPL=69;RPP=4.47751;RPPR=4.28764;RPR=79;RUN=1;SAF=87;SAP=12.9286;SAR=61;SF=0,3,5,6,9,10,20,21,24,25;SRF=90;SRP=4.28764;SRR=80;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	0/1:-375.635,0,-460.559:319:170:148:5445:6445:170,148	.	.	1/1:-1183.18,-111.682,0:372:0:371:13761:0:0,371	.	0/1:-730.46,0,-536.711:479:211:268:10118:7879:211,268	0/1:-371.917,0,-361.311:280:136:142:5313:5161:136,142	.	.	0/1:-449.92,0,-419.369:331:158:173:6359:6014:158,173	0/1:-511.555,0,-480.419:380:184:195:7347:6897:184,195	.	.	.	.	.	.	.	.	.	1/1:-1521.82,-143.29,0:476:0:476:17719:0:0,476	0/1:-199.595,0,-257.403:180:98:81:2948:3597:98,81	.	.	0/1:-295.673,0,-218.564:195:85:110:4089:3209:85,110	1/1:-1923.43,-177.85,0:605:1:601:22269:39:1,601	.	.	.	.	.	.	.	.	.	.	.
+chr6	7542148	.	CAT	CAAT	319.79	.	AB=0.6;ABP=4.31318;AC=2;AF=0.5;AN=4;AO=9;CIGAR=1M1I2M;DP=48;DPB=18;DPRA=0;EPP=3.25157;EPPR=3.0103;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=42;NS=1;NUMALT=1;ODDS=18.0585;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=299;QR=194;RO=6;RPL=3;RPP=5.18177;RPPR=8.80089;RPR=6;RUN=1;SAF=5;SAP=3.25157;SAR=4;SF=0,20;SRF=4;SRP=4.45795;SRR=2;TYPE=ins	GT:GL:DP:RO:AO:QA:QR:AD	0/1:-22.0369,0,-12.822:15:6:9:299:194:6,9	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-58.1461,0,-22.0993:33:10:23:778:363:10,23	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr6	7542274	.	T	C	449.40	.	AB=0.514706;ABP=3.13803;AC=2;AF=0.5;AN=4;AO=35;CIGAR=1X;DP=97;DPB=68;DPRA=0;EPP=3.56868;EPPR=4.65535;GTI=0;LEN=1;MEANALT=1;MQM=39.8857;MQMR=42;NS=1;NUMALT=1;ODDS=176.486;PAIRED=0.914286;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1228;QR=1210;RO=33;RPL=24;RPP=13.4954;RPPR=26.7649;RPR=11;RUN=1;SAF=16;SAP=3.56868;SAR=19;SF=12,21;SRF=18;SRP=3.60252;SRR=15;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-84.1947,0,-84.9177:68:33:35:1228:1210:33,35	.	.	.	.	.	.	.	.	0/1:-19.9071,0,-46.3731:29:20:9:324:627:20,9	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr6	7563983	.	T	G	5812.78	.	AB=0;ABP=0;AC=26;AF=1;AN=26;AO=154;CIGAR=1X;DP=2445;DPB=154;DPRA=0;EPP=4.42035;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=41.7532;MQMR=0;NS=1;NUMALT=1;ODDS=218.095;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=5727;QR=0;RO=0;RPL=61;RPP=17.4492;RPPR=0;RPR=93;RUN=1;SAF=89;SAP=11.1322;SAR=65;SF=0,3,5,6,9,10,12,16,20,21,24,25,27;SRF=0;SRP=0;SRR=0;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	1/1:-494.853,-46.3586,0:154:0:154:5727:0:0,154	.	.	1/1:-586.138,-53.6731,0:186:1:183:6786:19:1,183	.	1/1:-725.678,-69.2369,0:230:0:230:8385:0:0,230	1/1:-507.916,-48.1648,0:160:0:160:5852:0:0,160	.	.	1/1:-494.464,-46.6597,0:155:0:155:5706:0:0,155	1/1:-628.448,-59.6039,0:199:0:198:7295:0:0,198	.	1/1:-810.829,-74.3267,0:257:2:255:9412:32:2,255	.	.	.	1/1:-570.047,-53.8844,0:179:0:179:6580:0:0,179	.	.	.	1/1:-604.897,-58.0988,0:194:0:193:7035:0:0,193	1/1:-402.884,-38.8329,0:129:0:129:4659:0:0,129	.	.	1/1:-300.415,-28.5979,0:95:0:95:3463:0:0,95	1/1:-896.532,-85.1915,0:283:0:283:10345:0:0,283	.	1/1:-675.155,-65.7321,0:224:1:223:7816:17:1,223	.	.	.	.	.	.	.	.	.
+chr6	7565727	.	A	T	3828.31	.	AB=0.5;ABP=3.0103;AC=1;AF=0.5;AN=2;AO=155;CIGAR=1X;DP=310;DPB=310;DPRA=0;EPP=18.2666;EPPR=18.2666;GTI=0;LEN=1;MEANALT=1;MQM=41.9871;MQMR=42;NS=1;NUMALT=1;ODDS=881.5;PAIRED=1;PAIREDR=0.987097;PAO=0;PQA=0;PQR=0;PRO=0;QA=5628;QR=5730;RO=155;RPL=105;RPP=45.389;RPPR=58.614;RPR=50;RUN=1;SAF=80;SAP=3.36054;SAR=75;SF=0;SRF=76;SRP=3.13639;SRR=79;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	0/1:-395.621,0,-403.717:310:155:155:5628:5730:155,155	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr6	7566745	.	GAAAAAAAAAAACTTT	GAAAAAAAAAACTTT	1821.44	.	AB=0.5;ABP=3.0103;AC=1;AF=0.5;AN=2;AO=83;CIGAR=1M1D14M;DP=166;DPB=161.25;DPRA=0;EPP=7.43173;EPPR=11.8491;GTI=0;LEN=1;MEANALT=6;MQM=41.5542;MQMR=41.7042;NS=1;NUMALT=1;ODDS=386.505;PAIRED=0.987952;PAIREDR=0.985915;PAO=0;PQA=0;PQR=0;PRO=0;QA=2770;QR=2598;RO=71;RPL=59;RPP=35.0591;RPPR=22.1254;RPR=24;RUN=1;SAF=24;SAP=35.0591;SAR=59;SF=27;SRF=21;SRP=28.7315;SRR=50;TYPE=del	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-194.782,0,-178.838:166:71:83:2770:2598:71,83	.	.	.	.	.	.	.	.	.
+chr6	7572262	.	A	G	6388.08	.	AB=0;ABP=0;AC=20;AF=1;AN=26;AO=292;CIGAR=1X;DP=3597;DPB=292;DPRA=0;EPP=113.696;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=41.9384;MQMR=0;NS=1;NUMALT=1;ODDS=409.403;PAIRED=0.986301;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=10663;QR=0;RO=0;RPL=201;RPP=92.9925;RPPR=0;RPR=91;RUN=1;SAF=108;SAP=45.9638;SAR=184;SF=0,3,5,6,9,10,12,16,20,21,24,25,27;SRF=0;SRP=0;SRR=0;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	1/1:-925.933,-87.9008,0:292:0:292:10663:0:0,292	.	.	1/1:-715.955,-67.7318,0:225:0:225:8244:0:0,225	.	0/1:-393.23,0,-404.068:312:156:155:5608:5737:156,155	0/1:-262.904,0,-325.317:228:124:104:3814:4550:124,104	.	.	1/1:-706.83,-68.3338,0:228:0:227:8151:0:0,227	0/1:-346.361,0,-374.485:280:143:136:4951:5299:143,136	.	1/1:-1154.64,-111.381,0:371:0:370:13300:0:0,370	.	.	.	1/1:-889.494,-84.5894,0:281:0:281:10285:0:0,281	.	.	.	0/1:-398.778,0,-415.242:319:161:157:5725:5888:161,157	0/1:-291.052,0,-99.1393:157:47:110:3882:1680:47,110	.	.	0/1:-192.744,0,-190.37:149:73:75:2732:2705:73,75	1/1:-1230.84,-119.208,0:397:0:396:14203:0:0,396	.	1/1:-1115.23,-107.468,0:358:0:357:12853:0:0,357	.	.	.	.	.	.	.	.	.
+chr6	7576527	.	G	A	1645.33	.	AB=0;ABP=0;AC=20;AF=1;AN=26;AO=62;CIGAR=1X;DP=927;DPB=62;DPRA=0;EPP=19.9618;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=0;NS=1;NUMALT=1;ODDS=90.5554;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=2331;QR=0;RO=0;RPL=11;RPP=59.0483;RPPR=0;RPR=51;RUN=1;SAF=31;SAP=3.0103;SAR=31;SF=0,3,5,6,9,10,12,16,20,21,24,25,27;SRF=0;SRP=0;SRR=0;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	1/1:-202.157,-18.6639,0:62:0:62:2331:0:0,62	.	.	1/1:-173.537,-15.9546,0:54:0:53:2005:0:0,53	.	0/1:-118.42,0,-107.152:87:42:45:1665:1534:42,45	0/1:-60.1858,0,-88.1534:61:36:25:903:1220:36,25	.	.	1/1:-127.945,-12.3422,0:41:0:41:1477:0:0,41	0/1:-75.4043,0,-68.9365:57:27:29:1063:986:27,29	.	1/1:-270.825,-25.5876,0:87:0:85:3143:0:0,85	.	.	.	1/1:-230.573,-21.3731,0:71:0:71:2696:0:0,71	.	.	.	0/1:-98.7451,0,-84.3443:70:33:37:1383:1210:33,37	0/1:-114.29,0,-30.0522:57:15:42:1512:539:15,42	.	.	0/1:-45.9597,0,-52.7306:41:22:19:682:743:22,19	1/1:-412.431,-36.3825,0:133:1:132:4813:38:1,132	.	1/1:-333.477,-31.6082,0:106:0:105:3848:0:0,105	.	.	.	.	.	.	.	.	.
+chr6	7577260	.	C	T	2235.84	.	AB=0.50566;ABP=3.08405;AC=6;AF=0.5;AN=12;AO=134;CIGAR=1X;DP=1130;DPB=265;DPRA=0;EPP=19.6042;EPPR=18.94;GTI=0;LEN=1;MEANALT=1;MQM=41.7164;MQMR=41.8244;NS=1;NUMALT=1;ODDS=720.62;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=5039;QR=4675;RO=131;RPL=39;RPP=53.8292;RPPR=46.1248;RPR=95;RUN=1;SAF=50;SAP=21.7433;SAR=84;SF=5,6,12,20,21,24;SRF=58;SRP=6.73993;SRR=73;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	0/1:-353.996,0,-326.11:265:131:134:5039:4675:131,134	0/1:-188.816,0,-146.737:134:59:73:2641:2147:59,73	.	.	.	.	.	0/1:-420.169,0,-341.93:292:133:159:5870:4961:133,159	.	.	.	.	.	.	.	0/1:-194.317,0,-286.214:188:106:81:2903:3951:106,81	0/1:-120.366,0,-257.036:148:97:51:1900:3475:97,51	.	.	0/1:-124.754,0,-140.123:103:54:49:1797:1980:54,49	.	.	.	.	.	.	.	.	.	.	.	.
+chr6	7578819	.	TAGCG	GAGCA	3894.28	.	AB=0;ABP=0;AC=20;AF=1;AN=26;AO=175;CIGAR=1X3M1X;DP=2038;DPB=177.6;DPRA=0;EPP=62.0868;EPPR=0;GTI=0;LEN=5;MEANALT=2;MQM=41.7371;MQMR=0;NS=1;NUMALT=1;ODDS=249.286;PAIRED=0.988571;PAIREDR=0;PAO=3;PQA=116;PQR=0;PRO=0;QA=6501;QR=0;RO=0;RPL=97;RPP=7.48974;RPPR=0;RPR=78;RUN=1;SAF=82;SAP=4.51172;SAR=93;SF=0,3,5,6,9,10,12,16,20,21,24,25,27;SRF=0;SRP=0;SRR=0;TYPE=complex	GT:GL:DP:RO:AO:QA:QR:AD	1/1:-570.943,-53.5833,0:177:0:175:6501:0:0,175	.	.	1/1:-516.283,-48.1648,0:154:0:154:5730:0:0,154	.	0/1:-285.298,0,-222.93:194:89:102:3827:3237:89,102	0/1:-157.753,0,-173.788:126:67:59:2220:2432:67,59	.	.	1/1:-358.134,-34.0164,0:110:0:109:4031:0:0,109	0/1:-215.798,0,-157.607:139:63:76:2840:2303:63,76	.	1/1:-615.249,-56.8947,0:186:0:186:7005:0:0,186	.	.	.	1/1:-478.239,-44.5524,0:147:0:147:5527:0:0,147	.	.	.	0/1:-168.202,0,-220.07:150:83:64:2403:3045:83,64	0/1:-229.396,0,-57.0632:110:29:80:2959:1037:29,80	.	.	0/1:-85.2829,0,-106.655:74:40:34:1236:1479:40,34	1/1:-830.621,-78.2678,0:256:0:254:9358:0:0,254	.	1/1:-686.186,-64.7215,0:215:0:210:7745:0:0,210	.	.	.	.	.	.	.	.	.
+chr6	7580243	.	G	C	4405.88	.	AB=0.494709;ABP=3.10221;AC=1;AF=0.5;AN=2;AO=187;CIGAR=1X;DP=378;DPB=378;DPRA=0;EPP=9.15313;EPPR=3.0103;GTI=0;LEN=1;MEANALT=2;MQM=42;MQMR=42;NS=1;NUMALT=1;ODDS=1014.49;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=6585;QR=6952;RO=190;RPL=54;RPP=75.4817;RPPR=55.8571;RPR=133;RUN=1;SAF=64;SAP=43.4322;SAR=123;SF=0;SRF=64;SRP=46.9426;SRR=126;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	0/1:-459.823,0,-490.757:378:190:187:6585:6952:190,187	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr6	7581196	.	G	A	4758.75	.	AB=0.5;ABP=3.0103;AC=2;AF=0.5;AN=4;AO=124;CIGAR=1X;DP=742;DPB=248;DPRA=0;EPP=16.7396;EPPR=11.486;GTI=0;LEN=1;MEANALT=1;MQM=41.8548;MQMR=42;NS=1;NUMALT=1;ODDS=727.706;PAIRED=0.983871;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=4607;QR=4621;RO=124;RPL=61;RPP=3.08035;RPPR=13.0971;RPR=63;RUN=1;SAF=69;SAP=6.44263;SAR=55;SF=24,27;SRF=59;SRP=3.64073;SRR=65;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-323.539,0,-324.726:248:124:124:4607:4621:124,124	.	.	0/1:-647.873,0,-618.128:494:238:253:9183:8887:238,253	.	.	.	.	.	.	.	.	.
+chr6	7581636	.	G	A	2340.50	.	AB=0.450617;ABP=9.87323;AC=5;AF=0.5;AN=10;AO=146;CIGAR=1X;DP=1126;DPB=324;DPRA=0;EPP=6.81781;EPPR=10.0371;GTI=0;LEN=1;MEANALT=1;MQM=41.9726;MQMR=41.6854;NS=1;NUMALT=1;ODDS=833.225;PAIRED=1;PAIREDR=0.988764;PAO=0;PQA=0;PQR=0;PRO=0;QA=5388;QR=6510;RO=178;RPL=79;RPP=5.15203;RPPR=3.79105;RPR=67;RUN=1;SAF=72;SAP=3.06979;SAR=74;SF=5,6,20,21,24;SRF=90;SRP=3.0591;SRR=88;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	0/1:-370.045,0,-467.905:324:178:146:5388:6510:178,146	0/1:-216.955,0,-358.323:225:135:90:3274:4916:135,90	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-290.933,0,-376.359:258:142:115:4246:5214:142,115	0/1:-96.1329,0,-312.144:161:115:46:1660:4135:115,46	.	.	0/1:-241.021,0,-168.577:158:69:89:3325:2476:69,89	.	.	.	.	.	.	.	.	.	.	.	.
+chr6	7584611	.	C	T	2813.36	.	AB=0.489451;ABP=3.23936;AC=1;AF=0.5;AN=2;AO=116;CIGAR=1X;DP=237;DPB=237;DPRA=0;EPP=36.0317;EPPR=61.317;GTI=0;LEN=1;MEANALT=1;MQM=41.8276;MQMR=41.7025;NS=1;NUMALT=1;ODDS=647.799;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=4222;QR=4460;RO=121;RPL=74;RPP=22.1792;RPPR=74.2382;RPR=42;RUN=1;SAF=47;SAP=12.0706;SAR=69;SF=27;SRF=45;SRP=20.2565;SRR=76;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-293.311,0,-314.262:237:121:116:4222:4460:121,116	.	.	.	.	.	.	.	.	.
+chr6	7584617	.	C	T	3664.19	.	AB=0.5125;ABP=3.22745;AC=12;AF=0.5;AN=20;AO=82;CIGAR=1X;DP=2255;DPB=160;DPRA=0;EPP=37.3302;EPPR=56.9074;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=42;NS=1;NUMALT=1;ODDS=428.709;PAIRED=1;PAIREDR=0.987179;PAO=0;PQA=0;PQR=0;PRO=0;QA=3006;QR=2889;RO=78;RPL=48;RPP=8.20065;RPPR=31.5178;RPR=34;RUN=1;SAF=33;SAP=9.78953;SAR=49;SF=0,3,6,9,12,16,20,21,25,27;SRF=26;SRP=21.8297;SRR=52;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	0/1:-213.119,0,-202.972:160:78:82:3006:2889:78,82	.	.	0/1:-287.105,0,-276.989:219:108:111:4072:3947:108,111	.	.	0/1:-218.925,0,-192.035:161:76:85:3069:2762:76,85	.	.	0/1:-233.042,0,-197.614:171:81:90:3269:2887:81,90	.	.	0/1:-347.769,0,-336.129:274:134:139:4954:4840:134,139	.	.	.	1/1:-733.606,-68.9359,0:229:0:229:8452:0:0,229	.	.	.	0/1:-325.14,0,-406.434:288:157:130:4735:5679:157,130	0/1:-105.245,0,-264.787:149:99:50:1716:3558:99,50	.	.	.	1/1:-1094.27,-102.487,0:363:2:361:12706:74:2,361	.	0/1:-308.428,0,-285.982:241:118:123:4403:4133:118,123	.	.	.	.	.	.	.	.	.
+chr6	7585670	.	C	A	7032.85	.	AB=0.544012;ABP=14.6698;AC=5;AF=0.5;AN=10;AO=377;CIGAR=1X;DP=2831;DPB=693;DPRA=0;EPP=98.8604;EPPR=29.5935;GTI=0;LEN=1;MEANALT=2;MQM=41.9363;MQMR=41.586;NS=1;NUMALT=1;ODDS=1721.33;PAIRED=1;PAIREDR=0.984076;PAO=0;PQA=0;PQR=0;PRO=0;QA=13459;QR=11286;RO=314;RPL=216;RPP=20.4339;RPPR=64.1158;RPR=161;RUN=1;SAF=178;SAP=5.5504;SAR=199;SF=5,9,10,24,27;SRF=144;SRP=7.68519;SRR=170;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	0/1:-959.63,0,-765.69:693:314:377:13459:11286:314,377	.	.	.	0/1:-636.34,0,-753.74:563:299:263:9285:10633:299,263	0/1:-590.935,0,-671.377:506:262:244:8552:9484:262,244	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-518.142,0,-370.754:358:156:202:7200:5496:156,202	.	.	0/1:-903.247,0,-807.795:711:341:367:12882:11752:341,367	.	.	.	.	.	.	.	.	.
+chr6	7585967	.	G	C	7756.78	.	AB=0;ABP=0;AC=19;AF=1;AN=26;AO=338;CIGAR=1X;DP=4537;DPB=339;DPRA=0;EPP=5.09183;EPPR=5.18177;GTI=0;LEN=1;MEANALT=1;MQM=41.9882;MQMR=42;NS=1;NUMALT=1;ODDS=462.747;PAIRED=0.985207;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=12015;QR=36;RO=1;RPL=194;RPP=19.0715;RPPR=5.18177;RPR=144;RUN=1;SAF=154;SAP=8.79233;SAR=184;SF=0,3,5,6,9,10,12,16,20,21,24,25,27;SRF=1;SRP=5.18177;SRR=0;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	1/1:-1043.19,-98.5465,0:339:1:338:12015:36:1,338	.	.	1/1:-873.787,-85.1915,0:284:0:283:10055:0:0,283	.	0/1:-604.878,0,-456.537:426:187:237:8422:6706:187,237	0/1:-354.191,0,-353.524:284:143:141:5058:5036:143,141	.	.	1/1:-930.755,-90.9401,0:306:1:305:10694:12:1,305	0/1:-384.051,0,-367.574:303:148:154:5492:5275:148,154	.	0/1:-597.942,0,-459.658:426:189:237:8345:6746:189,237	.	.	.	1/1:-1084.39,-105.361,0:351:0:350:12469:0:0,350	.	.	.	0/1:-426.796,0,-493.588:367:197:170:6200:6937:197,170	0/1:-441.821,0,-71.2209:208:44:164:5797:1528:44,164	.	.	0/1:-207.589,0,-224.463:171:89:82:2974:3172:89,82	1/1:-1856.18,-182.123,0:608:0:605:21328:0:0,605	.	1/1:-1409.49,-139.678,0:464:0:464:16188:0:0,464	.	.	.	.	.	.	.	.	.
+chr6	76545684	.	T	C	1912.11	.	AB=0.436893;ABP=6.5732;AC=2;AF=0.5;AN=4;AO=45;CIGAR=1X;DP=303;DPB=103;DPRA=0;EPP=3.05855;EPPR=4.877;GTI=0;LEN=1;MEANALT=2;MQM=42;MQMR=42;NS=1;NUMALT=1;ODDS=243.102;PAIRED=1;PAIREDR=0.982456;PAO=0;PQA=0;PQR=0;PRO=0;QA=1655;QR=2183;RO=57;RPL=22;RPP=3.05855;RPPR=3.35316;RPR=23;RUN=1;SAF=28;SAP=8.84915;SAR=17;SF=6,25;SRF=33;SRP=6.09608;SRR=24;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	0/1:-112.353,0,-157.717:103:57:45:1655:2183:57,45	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-285.658,0,-240.71:200:92:108:3998:3486:92,108	.	.	.	.	.	.	.	.	.	.	.
+chr6	76554593	.	G	A	3684.32	.	AB=0;ABP=0;AC=26;AF=1;AN=26;AO=101;CIGAR=1X;DP=1517;DPB=101;DPRA=0;EPP=42.7633;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=41.9802;MQMR=0;NS=1;NUMALT=1;ODDS=144.621;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=3836;QR=0;RO=0;RPL=43;RPP=7.84774;RPPR=0;RPR=58;RUN=1;SAF=60;SAP=10.7717;SAR=41;SF=0,3,5,6,9,10,12,16,20,21,24,25,27;SRF=0;SRP=0;SRR=0;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	1/1:-331.272,-30.404,0:101:0:101:3836:0:0,101	.	.	1/1:-349.701,-32.5112,0:108:0:108:4046:0:0,108	.	1/1:-341.206,-32.5112,0:108:0:108:3949:0:0,108	1/1:-259.668,-24.6845,0:82:0:82:2999:0:0,82	.	.	1/1:-303.13,-27.9958,0:93:0:93:3505:0:0,93	1/1:-298.084,-27.9958,0:93:0:93:3446:0:0,93	.	1/1:-380.325,-35.8226,0:119:0:119:4445:0:0,119	.	.	.	1/1:-426.375,-40.037,0:133:0:133:4956:0:0,133	.	.	.	1/1:-493.096,-45.7566,0:152:0:152:5715:0:0,152	1/1:-298.349,-27.6948,0:93:0:92:3455:0:0,92	.	.	1/1:-240.347,-21.9752,0:73:0:73:2777:0:0,73	1/1:-644.574,-60.206,0:200:0:200:7511:0:0,200	.	1/1:-529.218,-48.7669,0:162:0:162:6132:0:0,162	.	.	.	.	.	.	.	.	.
+chr6	76558260	.	ATTTTTTTAAG	ATTTTTTTTAAG	1274.32	.	AB=0.487805;ABP=3.11623;AC=3;AF=0.5;AN=6;AO=40;CIGAR=1M1I10M;DP=309;DPB=85.6364;DPRA=0;EPP=13.6505;EPPR=7.30028;GTI=0;LEN=1;MEANALT=2;MQM=42;MQMR=41.9512;NS=1;NUMALT=1;ODDS=219.885;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1471;QR=1508;RO=41;RPL=15;RPP=8.43898;RPPR=9.41879;RPR=25;RUN=1;SAF=16;SAP=6.48466;SAR=24;SF=0,5,10;SRF=20;SRP=3.06326;SRR=21;TYPE=ins	GT:GL:DP:RO:AO:QA:QR:AD	0/1:-103.191,0,-106.544:82:41:40:1471:1508:41,40	.	.	.	.	0/1:-155.009,0,-142.712:115:55:59:2186:2039:55,59	.	.	.	.	0/1:-144.954,0,-126.919:112:49:55:2035:1820:49,55	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr6	76576290	.	C	T	1117.06	.	AB=0.565789;ABP=5.8675;AC=1;AF=0.5;AN=2;AO=43;CIGAR=1X;DP=76;DPB=76;DPRA=0;EPP=3.0608;EPPR=3.60252;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=40.8788;NS=1;NUMALT=1;ODDS=176.523;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1632;QR=1236;RO=33;RPL=16;RPP=9.12072;RPPR=8.34028;RPR=27;RUN=1;SAF=18;SAP=5.48477;SAR=25;SF=3;SRF=15;SRP=3.60252;SRR=18;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	0/1:-118.632,0,-83.206:76:33:43:1632:1236:33,43	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr6	76596728	.	C	T	1337.11	.	AB=0.479452;ABP=3.27802;AC=14;AF=0.5;AN=22;AO=35;CIGAR=1X;DP=884;DPB=73;DPRA=0;EPP=55.1877;EPPR=41.6397;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=42;NS=1;NUMALT=1;ODDS=187.45;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1331;QR=1348;RO=38;RPL=19;RPP=3.56868;RPPR=3.9246;RPR=16;RUN=1;SAF=16;SAP=3.56868;SAR=19;SF=0,3,5,9,10,12,16,20,24,25,27;SRF=15;SRP=6.66752;SRR=23;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	0/1:-93.0413,0,-95.3643:73:38:35:1331:1348:38,35	.	.	0/1:-53.7064,0,-69.4613:48:27:21:786:961:27,21	.	0/1:-74.6736,0,-138.389:82:51:31:1147:1882:51,31	.	.	.	1/1:-183.395,-16.8577,0:56:0:56:2140:0:0,56	0/1:-128.819,0,-33.0678:61:16:45:1702:596:16,45	.	1/1:-375.732,-34.3174,0:115:0:114:4354:0:0,114	.	.	.	0/1:-97.6722,0,-141.3:88:51:37:1440:1935:51,37	.	.	.	1/1:-241.054,-21.9752,0:73:0:73:2793:0:0,73	.	.	.	0/1:-45.1478,0,-40.3992:33:16:17:634:575:16,17	0/1:-204.344,0,-195.886:152:76:76:2896:2785:76,76	.	0/1:-87.504,0,-176.095:103:66:37:1383:2379:66,37	.	.	.	.	.	.	.	.	.
+chr6	76608128	.	G	C	1724.80	.	AB=0.663366;ABP=26.4235;AC=1;AF=0.5;AN=2;AO=67;CIGAR=1X;DP=101;DPB=101;DPRA=0;EPP=4.59839;EPPR=7.09778;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=42;NS=1;NUMALT=1;ODDS=152.822;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2434;QR=1218;RO=34;RPL=37;RPP=4.59839;RPPR=9.39698;RPR=30;RUN=1;SAF=35;SAP=3.30199;SAR=32;SF=3;SRF=15;SRP=4.03217;SRR=19;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	0/1:-181.322,0,-75.5613:101:34:67:2434:1218:34,67	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr6	76624741	.	C	T	5699.10	.	AB=0.543807;ABP=8.52755;AC=14;AF=0.5;AN=22;AO=180;CIGAR=1X;DP=3532;DPB=331;DPRA=0;EPP=24.2907;EPPR=32.131;GTI=0;LEN=1;MEANALT=1;MQM=41.9778;MQMR=42;NS=1;NUMALT=1;ODDS=851.221;PAIRED=1;PAIREDR=0.980132;PAO=0;PQA=0;PQR=0;PRO=0;QA=6669;QR=5658;RO=151;RPL=156;RPP=213.209;RPPR=88.2729;RPR=24;RUN=1;SAF=57;SAP=55.5599;SAR=123;SF=0,3,5,9,10,12,16,20,24,25,27;SRF=58;SRP=20.6265;SRR=93;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	0/1:-477.813,0,-390.732:331:151:180:6669:5658:151,180	.	.	0/1:-425.185,0,-352.254:300:138:162:5956:5106:138,162	.	0/1:-440.022,0,-441.398:343:173:170:6279:6310:173,170	.	.	.	1/1:-624.311,-59.905,0:199:0:199:7230:0:0,199	0/1:-373.941,0,-289.941:263:117:145:5247:4284:117,145	.	1/1:-1420.26,-132.757,0:450:2:448:16512:29:2,448	.	.	.	0/1:-387.31,0,-394.042:297:150:147:5515:5573:150,147	.	.	.	1/1:-1285.47,-110.034,0:410:5:403:15035:146:5,403	.	.	.	0/1:-210.591,0,-193.166:156:76:80:2971:2769:76,80	0/1:-598.905,0,-548.533:450:215:234:8540:7900:215,234	.	0/1:-392.921,0,-462.639:333:178:155:5685:6529:178,155	.	.	.	.	.	.	.	.	.
+chr6	112435264	.	T	G	1379.13	.	AB=0.463918;ABP=4.10723;AC=4;AF=0.5;AN=6;AO=45;CIGAR=1X;DP=279;DPB=97;DPRA=0;EPP=33.1696;EPPR=40.5935;GTI=0;LEN=1;MEANALT=1;MQM=41.9556;MQMR=42;NS=1;NUMALT=1;ODDS=244.656;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1703;QR=1995;RO=52;RPL=11;RPP=28.5372;RPPR=7.18621;RPR=34;RUN=1;SAF=21;SAP=3.44459;SAR=24;SF=0,10,21;SRF=26;SRP=3.0103;SRR=26;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	0/1:-118.006,0,-143.283:97:52:45:1703:1995:52,45	.	.	.	.	.	.	.	.	.	1/1:-300.342,-25.1753,0:96:1:95:3538:39:1,95	.	.	.	.	.	.	.	.	.	.	0/1:-33.323,0,-189.208:86:67:19:681:2488:67,19	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr6	112435273	.	A	C	1638.44	.	AB=0.456897;ABP=4.88226;AC=4;AF=0.5;AN=6;AO=53;CIGAR=1X;DP=334;DPB=116;DPRA=0;EPP=17.8009;EPPR=40.5458;GTI=0;LEN=1;MEANALT=1;MQM=41.9623;MQMR=42;NS=1;NUMALT=1;ODDS=257.005;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1799;QR=2313;RO=63;RPL=14;RPP=28.6173;RPPR=21.2438;RPR=39;RUN=1;SAF=25;SAP=3.37904;SAR=28;SF=0,10,21;SRF=29;SRP=3.872;SRR=34;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	0/1:-121.95,0,-166.066:116:63:53:1799:2313:63,53	.	.	.	.	.	.	.	.	.	1/1:-372.821,-33.0712,0:122:1:121:4354:38:1,121	.	.	.	.	.	.	.	.	.	.	0/1:-30.1552,0,-206.862:96:76:19:675:2709:76,19	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr6	112435912	.	A	T	3810.01	.	AB=0.555102;ABP=9.47154;AC=4;AF=0.5;AN=6;AO=136;CIGAR=1X;DP=628;DPB=245;DPRA=0;EPP=7.09778;EPPR=15.4614;GTI=0;LEN=1;MEANALT=1;MQM=41.9559;MQMR=41.7982;NS=1;NUMALT=1;ODDS=598.024;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=4997;QR=3964;RO=109;RPL=45;RPP=36.7959;RPPR=5.42083;RPR=91;RUN=1;SAF=79;SAP=10.7382;SAR=57;SF=0,10,21;SRF=68;SRP=17.5333;SRR=41;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	0/1:-360.502,0,-269.948:245:109:136:4997:3964:109,136	.	.	.	.	.	.	.	.	.	1/1:-773.648,-73.1503,0:243:0:243:8920:0:0,243	.	.	.	.	.	.	.	.	.	.	0/1:-43.7764,0,-315.249:140:113:27:982:4130:113,27	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr6	112440464	.	G	A	423.74	.	AB=0.232258;ABP=99.5217;AC=1;AF=0.5;AN=2;AO=36;CIGAR=1X;DP=155;DPB=155;DPRA=0;EPP=22.5536;EPPR=33.6846;GTI=0;LEN=1;MEANALT=1;MQM=41.8889;MQMR=41.8235;NS=1;NUMALT=1;ODDS=97.57;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1234;QR=4249;RO=119;RPL=22;RPP=6.8707;RPPR=25.3637;RPR=14;RUN=1;SAF=17;SAP=3.25157;SAR=19;SF=21;SRF=50;SRP=9.59771;SRR=69;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-60.694,0,-322.958:155:119:36:1234:4249:119,36	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr6	112457383	.	G	C	1187.11	.	AB=0.583333;ABP=10.9724;AC=3;AF=0.5;AN=6;AO=77;CIGAR=1X;DP=332;DPB=132;DPRA=0;EPP=3.0385;EPPR=7.78754;GTI=0;LEN=1;MEANALT=1;MQM=41.2987;MQMR=42;NS=1;NUMALT=1;ODDS=299.424;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2829;QR=2041;RO=55;RPL=39;RPP=3.0385;RPPR=3.04978;RPR=38;RUN=1;SAF=38;SAP=3.0385;SAR=39;SF=0,10,21;SRF=26;SRP=3.36563;SRR=29;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	0/1:-203.982,0,-137.413:132:55:77:2829:2041:55,77	.	.	.	.	.	.	.	.	.	0/1:-138.927,0,-150.734:117:60:55:2020:2136:60,55	.	.	.	.	.	.	.	.	.	.	0/1:-38.324,0,-165.725:83:63:20:722:2185:63,20	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr6	112457390	.	C	T	3818.68	.	AB=0;ABP=0;AC=23;AF=1;AN=24;AO=133;CIGAR=1X;DP=1499;DPB=133;DPRA=0;EPP=11.6472;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=41.594;MQMR=0;NS=1;NUMALT=1;ODDS=188.982;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=5015;QR=0;RO=0;RPL=69;RPP=3.41847;RPPR=0;RPR=64;RUN=1;SAF=65;SAP=3.15724;SAR=68;SF=0,3,5,6,9,10,12,16,20,21,24,27;SRF=0;SRP=0;SRR=0;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	1/1:-430.799,-40.037,0:133:0:133:5015:0:0,133	.	.	1/1:-397.111,-34.2062,0:126:1:125:4631:39:1,125	.	1/1:-456.261,-42.7463,0:142:0:142:5280:0:0,142	0/1:-123.752,0,-114.431:91:44:47:1740:1630:44,47	.	.	1/1:-266.283,-24.6845,0:82:0:82:3078:0:0,82	1/1:-359.254,-33.7154,0:112:0:112:4180:0:0,112	.	1/1:-520.657,-48.4658,0:161:0:161:6033:0:0,161	.	.	.	1/1:-503.765,-46.3586,0:154:0:154:5830:0:0,154	.	.	.	1/1:-488.199,-45.4555,0:151:0:151:5662:0:0,151	1/1:-276.796,-25.0913,0:88:1:87:3210:14:1,87	.	.	1/1:-268.618,-25.2865,0:84:0:84:3106:0:0,84	.	.	1/1:-543.775,-51.0819,0:175:1:174:6316:16:1,174	.	.	.	.	.	.	.	.	.
+chr6	112457471	.	G	A	2081.87	.	AB=0;ABP=0;AC=23;AF=1;AN=24;AO=68;CIGAR=1X;DP=844;DPB=68;DPRA=0;EPP=21.4039;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=41.7941;MQMR=0;NS=1;NUMALT=1;ODDS=98.8732;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=2543;QR=0;RO=0;RPL=50;RPP=35.7101;RPPR=0;RPR=18;RUN=1;SAF=28;SAP=7.60871;SAR=40;SF=0,3,5,6,9,10,12,16,20,21,24,27;SRF=0;SRP=0;SRR=0;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	1/1:-219.619,-20.47,0:68:0:68:2543:0:0,68	.	.	1/1:-187.882,-14.6392,0:61:1:60:2209:39:1,60	.	1/1:-200.047,-18.6639,0:62:0:62:2328:0:0,62	0/1:-93.8146,0,-72.6182:63:28:35:1302:1058:28,35	.	.	1/1:-149.023,-13.8474,0:46:0:46:1724:0:0,46	1/1:-173.923,-16.2556,0:54:0:54:2009:0:0,54	.	1/1:-291.259,-27.0927,0:90:0:90:3382:0:0,90	.	.	.	1/1:-336.78,-31.0061,0:103:0:103:3901:0:0,103	.	.	.	1/1:-250.772,-23.4803,0:78:0:78:2897:0:0,78	1/1:-196.059,-18.3628,0:61:0:61:2264:0:0,61	.	.	1/1:-191.945,-17.7608,0:59:0:59:2221:0:0,59	.	.	1/1:-313.62,-29.802,0:99:0:99:3635:0:0,99	.	.	.	.	.	.	.	.	.
+chr6	112471688	.	G	C	1851.08	.	AB=0.450704;ABP=6.00754;AC=5;AF=0.5;AN=8;AO=64;CIGAR=1X;DP=452;DPB=142;DPRA=0;EPP=4.23175;EPPR=3.45573;GTI=0;LEN=1;MEANALT=1;MQM=41.7031;MQMR=42;NS=1;NUMALT=1;ODDS=337.878;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2434;QR=2938;RO=78;RPL=3;RPP=117.148;RPPR=110.025;RPR=61;RUN=1;SAF=38;SAP=7.89611;SAR=26;SF=0,6,10,21;SRF=47;SRP=10.1372;SRR=31;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	0/1:-167.468,0,-211.29:142:78:64:2434:2938:78,64	.	.	.	.	.	1/1:-376.323,-34.9195,0:116:0:116:4355:0:0,116	.	.	.	0/1:-181.567,0,-128.681:116:50:66:2505:1888:50,66	.	.	.	.	.	.	.	.	.	.	0/1:-87.7913,0,-112.369:78:43:35:1279:1576:43,35	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr6	112480041	.	A	G	2074.94	.	AB=0.545455;ABP=5.77399;AC=1;AF=0.5;AN=2;AO=84;CIGAR=1X;DP=154;DPB=154;DPRA=0;EPP=4.66476;EPPR=3.50664;GTI=0;LEN=1;MEANALT=1;MQM=41.75;MQMR=41.7286;NS=1;NUMALT=1;ODDS=389.853;PAIRED=0.988095;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3041;QR=2614;RO=70;RPL=49;RPP=8.07707;RPPR=20.8784;RPR=35;RUN=1;SAF=55;SAP=20.4855;SAR=29;SF=12;SRF=48;SRP=23.9805;SRR=22;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-216.568,0,-179.807:154:70:84:3041:2614:70,84	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr6	112493872	.	A	G	12525.43	.	AB=0;ABP=0;AC=19;AF=1;AN=24;AO=535;CIGAR=1X;DP=6273;DPB=535;DPRA=0;EPP=28.3414;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=41.9065;MQMR=0;NS=1;NUMALT=1;ODDS=746.273;PAIRED=0.996262;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=19995;QR=0;RO=0;RPL=168;RPP=163.744;RPPR=0;RPR=367;RUN=1;SAF=280;SAP=5.54707;SAR=255;SF=0,3,5,6,9,12,16,20,21,24,25,27;SRF=0;SRP=0;SRR=0;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	1/1:-1726.75,-161.051,0:535:0:535:19995:0:0,535	.	.	0/1:-700.761,0,-597.205:499:235:264:9863:8642:235,264	.	1/1:-2220.79,-207.711,0:692:0:690:25754:0:0,690	1/1:-1361.25,-125.831,0:419:0:418:15765:0:0,418	.	.	1/1:-1295.05,-121.616,0:404:0:404:15038:0:0,404	.	.	0/1:-1101.59,0,-1056.61:825:403:419:15661:15132:403,419	.	.	.	0/1:-675.145,0,-637.105:498:243:254:9567:9122:243,254	.	.	.	0/1:-683.565,0,-843.038:583:317:266:9967:11813:317,266	0/1:-485.403,0,-106.611:233:57:176:6410:2052:57,176	.	.	1/1:-702.171,-65.9256,0:219:0:219:8133:0:0,219	1/1:-2392.68,-226.375,0:753:0:752:27651:0:0,752	.	1/1:-1948.19,-183.929,0:613:0:611:22523:0:0,611	.	.	.	.	.	.	.	.	.
+chr6	112496511	.	C	A	1450.59	.	AB=0.54918;ABP=5.57335;AC=3;AF=0.5;AN=6;AO=67;CIGAR=1X;DP=463;DPB=122;DPRA=0;EPP=3.30199;EPPR=3.04978;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=41.9636;NS=1;NUMALT=1;ODDS=294.023;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2511;QR=2022;RO=55;RPL=14;RPP=52.306;RPPR=40.9518;RPR=53;RUN=1;SAF=47;SAP=26.6372;SAR=20;SF=9,21,27;SRF=34;SRP=9.68264;SRR=21;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	0/1:-180.936,0,-138.61:122:55:67:2511:2022:55,67	.	.	.	.	.	.	.	.	.	.	.	0/1:-55.1209,0,-230.973:111:83:28:1029:3048:83,28	.	.	.	.	.	0/1:-243.866,0,-343.283:230:130:100:3610:4772:130,100	.	.	.	.	.	.	.	.	.
+chr6	112496690	.	G	C	436.27	.	AB=0.269231;ABP=51.1168;AC=1;AF=0.5;AN=2;AO=28;CIGAR=1X;DP=104;DPB=104;DPRA=0;EPP=7.97367;EPPR=19.4678;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=41.5132;NS=1;NUMALT=1;ODDS=100.454;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1007;QR=2842;RO=76;RPL=21;RPP=18.2106;RPPR=32.268;RPR=7;RUN=1;SAF=11;SAP=5.80219;SAR=17;SF=21;SRF=28;SRP=14.4391;SRR=48;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-56.4439,0,-212.475:104:76:28:1007:2842:76,28	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr6	112506583	.	G	T	3837.76	.	AB=0;ABP=0;AC=20;AF=1;AN=24;AO=167;CIGAR=1X;DP=1812;DPB=167;DPRA=0;EPP=9.8888;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=41.8683;MQMR=0;NS=1;NUMALT=1;ODDS=236.116;PAIRED=0.994012;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=6327;QR=0;RO=0;RPL=124;RPP=88.3219;RPPR=0;RPR=43;RUN=1;SAF=52;SAP=54.6185;SAR=115;SF=0,3,5,6,9,12,16,20,21,24,25,27;SRF=0;SRP=0;SRR=0;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	1/1:-546.268,-50.272,0:167:0:167:6327:0:0,167	.	.	0/1:-147.905,0,-124.533:104:49:55:2070:1795:49,55	.	1/1:-533.957,-49.3689,0:164:0:164:6185:0:0,164	1/1:-370.031,-34.0164,0:113:0:113:4282:0:0,113	.	.	1/1:-309.131,-28.2968,0:94:0:94:3592:0:0,94	.	.	0/1:-216.083,0,-227.415:170:87:83:3086:3222:87,83	.	.	.	0/1:-233.589,0,-160.221:151:64:87:3245:2378:64,87	.	.	.	0/1:-192.715,0,-180.836:142:69:73:2722:2584:69,73	1/1:-325.906,-30.404,0:101:0:101:3762:0:0,101	.	.	1/1:-273.934,-25.2865,0:84:0:84:3167:0:0,84	1/1:-808.036,-76.4616,0:255:0:254:9346:0:0,254	.	1/1:-863.575,-80.375,0:267:0:267:10033:0:0,267	.	.	.	.	.	.	.	.	.
+chr6	112508769	.	TG	GT	7600.18	.	AB=0;ABP=0;AC=26;AF=1;AN=26;AO=224;CIGAR=2X;DP=3237;DPB=228;DPRA=0;EPP=3.04908;EPPR=0;GTI=0;LEN=2;MEANALT=5;MQM=41.6295;MQMR=0;NS=1;NUMALT=1;ODDS=315.135;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=7973;QR=0;RO=0;RPL=144;RPP=42.7172;RPPR=0;RPR=80;RUN=1;SAF=125;SAP=9.56349;SAR=99;SF=0,3,5,6,9,10,12,16,20,21,24,25,27;SRF=0;SRP=0;SRR=0;TYPE=mnp	GT:GL:DP:RO:AO:QA:QR:AD	1/1:-692.209,-67.4307,0:228:0:224:7973:0:0,224	.	.	1/1:-762.015,-73.1503,0:242:0:241:8708:0:0,241	.	1/1:-888.408,-86.0946,0:288:0:283:10149:0:0,283	1/1:-516.779,-49.971,0:166:0:166:5936:0:0,166	.	.	1/1:-624.654,-60.507,0:203:0:201:7252:0:0,201	1/1:-682.556,-66.8287,0:226:0:221:7907:0:0,221	.	1/1:-1053.36,-100.845,0:336:0:333:12116:0:0,333	.	.	.	1/1:-824.368,-78.8699,0:260:0:259:9402:0:0,259	.	.	.	1/1:-995.87,-95.1255,0:314:0:311:11331:0:0,311	1/1:-430.605,-43.6494,0:142:0:142:4824:0:0,142	.	.	1/1:-429.49,-41.8432,0:140:0:138:4977:0:0,138	1/1:-1234.39,-120.111,0:408:0:398:14181:0:0,398	.	1/1:-842.911,-83.6863,0:284:0:278:9690:0:0,278	.	.	.	.	.	.	.	.	.
+chr6	112512905	.	G	A	2919.27	.	AB=0.534884;ABP=5.28277;AC=3;AF=0.5;AN=6;AO=115;CIGAR=1X;DP=838;DPB=215;DPRA=0;EPP=3.93554;EPPR=8.56927;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=41.81;NS=1;NUMALT=1;ODDS=561.448;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=4335;QR=3704;RO=100;RPL=41;RPP=23.5732;RPPR=53.041;RPR=74;RUN=1;SAF=74;SAP=23.5732;SAR=41;SF=9,21,27;SRF=60;SRP=11.6962;SRR=40;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	0/1:-309.959,0,-257.2:215:100:115:4335:3704:100,115	.	.	.	.	.	.	.	.	.	.	.	0/1:-64.9102,0,-427.869:194:154:40:1420:5587:154,40	.	.	.	.	.	0/1:-548.926,0,-564.663:429:218:210:7856:7993:218,210	.	.	.	.	.	.	.	.	.
+chr6	112522852	.	G	A	3545.88	.	AB=0.52381;ABP=4.25114;AC=5;AF=0.5;AN=10;AO=132;CIGAR=1X;DP=1391;DPB=252;DPRA=0;EPP=34.8586;EPPR=21.5402;GTI=0;LEN=1;MEANALT=1;MQM=41.8258;MQMR=42;NS=1;NUMALT=1;ODDS=680.95;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=4997;QR=4377;RO=120;RPL=64;RPP=3.27351;RPPR=3.0103;RPR=68;RUN=1;SAF=64;SAP=3.27351;SAR=68;SF=0,3,5,12,27;SRF=60;SRP=3.0103;SRR=60;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	0/1:-354.396,0,-304.431:252:120:132:4997:4377:120,132	.	.	0/1:-244.293,0,-288.878:206:110:96:3542:4048:110,96	.	0/1:-330.291,0,-283.717:235:112:123:4639:4101:112,123	.	.	.	.	.	.	0/1:-414.061,0,-467.893:340:179:161:5999:6579:179,161	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-489.991,0,-424.524:358:174:184:6920:6117:174,184	.	.	.	.	.	.	.	.	.
+chr6	112522893	.	A	C	2378.25	.	AB=0.482517;ABP=3.38993;AC=2;AF=0.5;AN=4;AO=69;CIGAR=1X;DP=402;DPB=143;DPRA=0;EPP=14.3712;EPPR=7.23587;GTI=0;LEN=1;MEANALT=1;MQM=41.7246;MQMR=41.973;NS=1;NUMALT=1;ODDS=401.333;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2624;QR=2802;RO=74;RPL=39;RPP=5.55942;RPPR=3.0103;RPR=30;RUN=1;SAF=24;SAP=16.8888;SAR=45;SF=9,27;SRF=20;SRP=36.9322;SRR=54;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	0/1:-183.343,0,-199.037:143:74:69:2624:2802:74,69	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-312.382,0,-372.219:259:139:120:4529:5215:139,120	.	.	.	.	.	.	.	.	.
+chr6	112537682	.	A	G	9290.99	.	AB=0;ABP=0;AC=2;AF=1;AN=2;AO=316;CIGAR=1X;DP=316;DPB=316;DPRA=0;EPP=206.304;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=41.8133;MQMR=0;NS=1;NUMALT=1;ODDS=440.595;PAIRED=0.996835;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=11097;QR=0;RO=0;RPL=184;RPP=21.5915;RPPR=0;RPR=132;RUN=1;SAF=214;SAP=89.2095;SAR=102;SF=27;SRF=0;SRP=0;SRR=0;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	1/1:-965.185,-95.1255,0:316:0:316:11097:0:0,316	.	.	.	.	.	.	.	.	.
+chr6	123539904	.	C	T	5080.54	.	AB=0.526971;ABP=4.53303;AC=13;AF=0.5;AN=20;AO=127;CIGAR=1X;DP=2891;DPB=241;DPRA=0;EPP=5.07918;EPPR=9.18185;GTI=0;LEN=1;MEANALT=1;MQM=41.9843;MQMR=41.6667;NS=1;NUMALT=1;ODDS=610.233;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=4755;QR=4162;RO=114;RPL=107;RPP=132.427;RPPR=131.089;RPR=20;RUN=1;SAF=49;SAP=17.3899;SAR=78;SF=0,3,5,10,12,16,20,21,24,25;SRF=50;SRP=6.74371;SRR=64;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	0/1:-339.016,0,-286.909:241:114:127:4755:4162:114,127	.	.	0/1:-407.661,0,-389.093:304:149:153:5772:5584:149,153	.	1/1:-811.485,-73.3401,0:256:1:255:9425:39:1,255	.	.	.	.	0/1:-469.447,0,-357.973:314:141:173:6528:5235:141,173	.	0/1:-519.33,0,-467.416:372:178:194:7308:6712:178,194	.	.	.	0/1:-316.687,0,-587.098:345:213:132:4869:8013:213,132	.	.	.	0/1:-438.398,0,-441.705:337:169:168:6298:6316:169,168	0/1:-143.134,0,-200.855:132:76:56:2113:2773:76,56	.	.	1/1:-543.148,-49.67,0:165:0:165:6290:0:0,165	1/1:-1364.31,-126.339,0:425:1:424:15798:16:1,424	.	.	.	.	.	.	.	.	.	.	.
+chr6	123581789	.	GAAAAAAAAAAAAAAAGAATGTAGAAAGAAAGG	GAAAAAAAAAAAAAAAAGAATGTAGAAAGAAAGG,AAAAAAAAAAAAAAAAAGAATGTAGAAAGAAAGG,GAAAAAAAAAAAAAAGAATGTAGAAAGAAAGG	139.11	.	AB=0.214286;ABP=22.8638;AC=14,4,1;AF=0.5;AN=26;AO=6;CIGAR=1M1I32M;DP=576;DPB=28.3939;DPRA=0;EPP=16.0391;EPPR=10.7656;GTI=0;LEN=1;MEANALT=16;MQM=39;MQMR=42;NS=1;NUMALT=1;ODDS=3.72788;PAIRED=1;PAIREDR=0.714286;PAO=0.5;PQA=9;PQR=9;PRO=0.5;QA=135;QR=251;RO=7;RPL=2;RPP=4.45795;RPPR=3.32051;RPR=4;RUN=1;SAF=2;SAP=4.45795;SAR=4;SF=0,3,5,6,9,10,12,16,20,21,24,25,27;SRF=2;SRP=5.80219;SRR=5;TYPE=ins	GT:GL:DP:RO:AO:QA:QR:AD	0/1:-7.36423,0,-17.4721,.,.,.,.,.,.,.:28:7:6,.,.:135,.,.:251:7,6	.	.	2/2:-17.2847,.,.,-4.06,.,0,.,.,.,.:29:2:.,2,.:.,50,.:73:2,2	.	0/1:-19.0684,0,-15.1103,.,.,.,.,.,.,.:47:8:13,.,.:317,.,.:271:8,13	2/1:-10.6655,-3.984,-3.71938,-6.3488,0,-5.94477,.,.,.,.:20:1:3,2,.:103,48,.:37:1,2,3	.	.	1/1:-19.7151,-5.11751,0,.,.,.,.,.,.,.:18:0:9,.,.:222,.,.:0:0,9	0/1:-14.2879,0,-2.20155,.,.,.,.,.,.,.:42:3:10,.,.:237,.,.:100:3,10	.	0/3:-15.9294,.,.,.,.,.,0,.,.,-59.0991:86:24:.,.,11:.,.,322:826:24,11	.	.	.	1/1:-32.692,-1.83064,0,.,.,.,.,.,.,.:37:2:18,.,.:438,.,.:68:2,18	.	.	.	0/1:-19.2028,0,-13.5363,.,.,.,.,.,.,.:43:7:12,.,.:309,.,.:247:7,12	2/1:-41.4462,-6.88501,-18.0799,-19.7552,0,-32.3781,.,.,.,.:49:6:18,10,.:482,246,.:218:6,10,18	.	.	1/1:-18.1525,-3.61236,0,.,.,.,.,.,.,.:12:0:8,.,.:205,.,.:0:0,8	0/1:-12.2922,0,-60.6411,.,.,.,.,.,.,.:82:26:12,.,.:309,.,.:886:26,12	.	0/1:-19.845,0,-32.7294,.,.,.,.,.,.,.:83:17:15,.,.:418,.,.:570:17,15	.	.	.	.	.	.	.	.	.
+chr6	123594181	.	T	G	80.05	.	AB=0.571429;ABP=3.32051;AC=1;AF=0.5;AN=2;AO=4;CIGAR=1X;DP=7;DPB=7;DPRA=0;EPP=11.6962;EPPR=3.73412;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=42;NS=1;NUMALT=1;ODDS=11.2606;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=156;QR=116;RO=3;RPL=2;RPP=3.0103;RPPR=9.52472;RPR=2;RUN=1;SAF=2;SAP=3.0103;SAR=2;SF=24;SRF=2;SRP=3.73412;SRR=1;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-11.67,0,-8.25433:7:3:4:156:116:3,4	.	.	.	.	.	.	.	.	.	.	.	.
+chr6	123595869	.	A	C	625.41	.	AB=0.492063;ABP=3.04477;AC=2;AF=0.5;AN=4;AO=31;CIGAR=1X;DP=150;DPB=63;DPRA=0;EPP=11.486;EPPR=16.3106;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=42;NS=1;NUMALT=1;ODDS=170.185;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1159;QR=1199;RO=32;RPL=17;RPP=3.64073;RPPR=7.35324;RPR=14;RUN=1;SAF=9;SAP=14.8483;SAR=22;SF=10,21;SRF=13;SRP=5.45321;SRR=19;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	0/1:-81.5343,0,-84.9534:63:32:31:1159:1199:32,31	.	.	.	.	.	.	.	.	.	.	0/1:-60.6761,0,-166.741:87:60:27:999:2260:60,27	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr6	123658825	.	G	T	666.15	.	AB=0.216216;ABP=28.8919;AC=2;AF=0.5;AN=4;AO=8;CIGAR=1X;DP=123;DPB=37;DPRA=0;EPP=3.0103;EPPR=9.07545;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=41.931;NS=1;NUMALT=1;ODDS=17.1322;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=307;QR=1046;RO=29;RPL=7;RPP=12.7819;RPPR=3.68421;RPR=1;RUN=1;SAF=3;SAP=4.09604;SAR=5;SF=21,27;SRF=16;SRP=3.68421;SRR=13;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-15.7202,0,-79.9522:37:29:8:307:1046:29,8	.	.	.	.	.	0/1:-134.448,0,-91.4978:86:36:50:1856:1351:36,50	.	.	.	.	.	.	.	.	.
+chr6	123687288	.	A	C	3963.62	.	AB=0;ABP=0;AC=26;AF=1;AN=26;AO=117;CIGAR=1X;DP=1621;DPB=117;DPRA=0;EPP=3.17734;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=41.6667;MQMR=0;NS=1;NUMALT=1;ODDS=166.802;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=4308;QR=0;RO=0;RPL=46;RPP=14.61;RPPR=0;RPR=71;RUN=1;SAF=60;SAP=3.17734;SAR=57;SF=0,3,5,6,9,10,12,16,20,21,24,25,27;SRF=0;SRP=0;SRR=0;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	1/1:-372.497,-35.2205,0:117:0:117:4308:0:0,117	.	.	1/1:-335.562,-31.3071,0:104:0:104:3883:0:0,104	.	1/1:-481.05,-44.5524,0:148:0:148:5587:0:0,148	1/1:-315.547,-29.1999,0:97:0:97:3651:0:0,97	.	.	1/1:-235.868,-21.6742,0:72:0:72:2727:0:0,72	1/1:-385.022,-35.5215,0:118:0:118:4459:0:0,118	.	1/1:-541.421,-49.67,0:165:0:165:6272:0:0,165	.	.	.	1/1:-376.577,-33.7232,0:118:1:117:4380:18:1,117	.	.	.	1/1:-440.773,-37.8877,0:138:1:137:5158:38:1,137	1/1:-292.646,-27.2999,0:96:1:95:3397:16:1,95	.	.	1/1:-218.066,-20.47,0:68:0:68:2519:0:0,68	1/1:-647.405,-58.6071,0:200:1:199:7513:16:1,199	.	1/1:-584.353,-54.1854,0:180:0:180:6765:0:0,180	.	.	.	.	.	.	.	.	.
+chr6	123687403	.	A	G	830.52	.	AB=0.73913;ABP=25.858;AC=1;AF=0.5;AN=2;AO=34;CIGAR=1X;DP=46;DPB=46;DPRA=0;EPP=3.26577;EPPR=3.0103;GTI=0;LEN=1;MEANALT=1;MQM=40.9412;MQMR=42;NS=1;NUMALT=1;ODDS=41.2912;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1287;QR=465;RO=12;RPL=28;RPP=33.9218;RPPR=5.9056;RPR=6;RUN=1;SAF=10;SAP=15.5282;SAR=24;SF=3;SRF=2;SRP=14.5915;SRR=10;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	0/1:-95.4245,0,-26.5471:46:12:34:1287:465:12,34	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr6	123696766	.	G	T	1312.19	.	AB=0.447917;ABP=5.27225;AC=5;AF=0.5;AN=10;AO=43;CIGAR=1X;DP=557;DPB=96;DPRA=0;EPP=11.5447;EPPR=9.93443;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=42;NS=1;NUMALT=1;ODDS=243.904;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1655;QR=2022;RO=53;RPL=29;RPP=14.3727;RPPR=5.01789;RPR=14;RUN=1;SAF=24;SAP=4.27278;SAR=19;SF=0,6,12,20,27;SRF=28;SRP=3.37904;SRR=25;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	0/1:-114.096,0,-145.818:96:53:43:1655:2022:53,43	.	.	.	.	.	0/1:-75.3539,0,-108.54:69:40:29:1110:1494:40,29	.	.	.	.	.	0/1:-221.497,0,-189.667:155:73:82:3100:2734:73,82	.	.	.	.	.	.	.	0/1:-127.967,0,-150.989:104:56:48:1843:2110:56,48	.	.	.	.	.	.	0/1:-155.938,0,-195.663:133:73:60:2268:2724:73,60	.	.	.	.	.	.	.	.	.
+chr6	123699019	.	A	C	1174.66	.	AB=0.569767;ABP=6.64625;AC=5;AF=0.5;AN=8;AO=49;CIGAR=1X;DP=338;DPB=86;DPRA=0;EPP=6.59988;EPPR=5.88603;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=42;NS=1;NUMALT=1;ODDS=187.932;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1818;QR=1364;RO=37;RPL=25;RPP=3.05462;RPPR=10.1116;RPR=24;RUN=1;SAF=10;SAP=40.2799;SAR=39;SF=5,6,9,25;SRF=6;SRP=39.6906;SRR=31;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	0/1:-131.691,0,-92.5697:86:37:49:1818:1364:37,49	0/1:-56.4585,0,-74.2573:50:28:22:820:1028:28,22	.	.	1/1:-147.1,-13.8474,0:46:0:46:1693:0:0,46	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-176.859,0,-219.745:156:85:70:2583:3072:85,70	.	.	.	.	.	.	.	.	.	.	.
+chr6	123699042	.	T	C	1262.57	.	AB=0.471264;ABP=3.63429;AC=11;AF=0.5;AN=18;AO=41;CIGAR=1X;DP=789;DPB=87;DPRA=0;EPP=3.48696;EPPR=4.70971;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=42;NS=1;NUMALT=1;ODDS=221.917;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1550;QR=1735;RO=46;RPL=25;RPP=7.30028;RPPR=9.80795;RPR=16;RUN=1;SAF=5;SAP=53.9075;SAR=36;SF=0,3,5,10,16,20,21,24,25;SRF=11;SRP=30.2009;SRR=35;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	0/1:-108.258,0,-124.01:87:46:41:1550:1735:46,41	.	.	0/1:-115.727,0,-95.2192:82:36:45:1617:1385:36,45	.	0/1:-91.4261,0,-136.461:85:49:36:1349:1873:49,36	.	.	.	.	1/1:-208.707,-20.169,0:67:0:67:2422:0:0,67	.	.	.	.	.	0/1:-99.5462,0,-87.9234:72:34:38:1396:1267:34,38	.	.	.	0/1:-164.363,0,-118.947:108:47:61:2275:1748:47,61	0/1:-68.3826,0,-140.153:79:51:28:1062:1905:51,28	.	.	1/1:-155.065,-14.1484,0:47:0:47:1791:0:0,47	0/1:-224.352,0,-199.688:162:77:85:3155:2871:77,85	.	.	.	.	.	.	.	.	.	.	.
+chr6	123702499	.	G	A	1833.72	.	AB=0.443548;ABP=6.44263;AC=7;AF=0.5;AN=12;AO=55;CIGAR=1X;DP=835;DPB=124;DPRA=0;EPP=9.68264;EPPR=3.82055;GTI=0;LEN=1;MEANALT=3;MQM=42;MQMR=42;NS=1;NUMALT=1;ODDS=306.969;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2051;QR=2473;RO=67;RPL=23;RPP=6.20829;RPPR=10.3026;RPR=32;RUN=1;SAF=32;SAP=6.20829;SAR=23;SF=5,6,9,21,25,27;SRF=39;SRP=6.93191;SRR=28;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	0/1:-140.914,0,-177.626:124:67:55:2051:2473:67,55	0/1:-104.577,0,-121.897:88:47:41:1507:1707:47,41	.	.	1/1:-309.417,-28.8989,0:96:0:96:3574:0:0,96	.	.	.	.	.	.	.	.	.	.	.	0/1:-49.4737,0,-181.818:96:69:27:899:2424:69,27	.	.	.	0/1:-306.815,0,-314.404:243:123:120:4384:4466:123,120	.	0/1:-242.256,0,-233.751:188:94:94:3450:3336:94,94	.	.	.	.	.	.	.	.	.
+chr6	123714764	.	C	T	137.78	.	AB=0.22449;ABP=35.3165;AC=1;AF=0.5;AN=2;AO=11;CIGAR=1X;DP=49;DPB=49;DPRA=0;EPP=4.78696;EPPR=5.88603;GTI=0;LEN=1;MEANALT=2;MQM=42;MQMR=42;NS=1;NUMALT=1;ODDS=31.7259;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=426;QR=1374;RO=37;RPL=6;RPP=3.20771;RPPR=3.5385;RPR=5;RUN=1;SAF=8;SAP=7.94546;SAR=3;SF=21;SRF=24;SRP=10.1116;SRR=13;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-22.4072,0,-104.963:49:37:11:426:1374:37,11	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr6	123833457	.	G	C	1035.46	.	AB=0.458333;ABP=3.37221;AC=21;AF=0.5;AN=22;AO=11;CIGAR=1X;DP=392;DPB=24;DPRA=0;EPP=4.78696;EPPR=16.5402;GTI=0;LEN=1;MEANALT=1;MQM=41.8182;MQMR=42;NS=1;NUMALT=1;ODDS=54.3147;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=416;QR=488;RO=13;RPL=4;RPP=4.78696;RPPR=16.5402;RPR=7;RUN=1;SAF=8;SAP=7.94546;SAR=3;SF=0,3,5,6,9,10,16,20,21,24,25;SRF=4;SRP=7.18621;SRR=9;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	0/1:-29.0955,0,-35.4123:24:13:11:416:488:13,11	.	.	1/1:-107.777,-10.5361,0:35:0:35:1268:0:0,35	.	1/1:-130.461,-12.9443,0:43:0:43:1528:0:0,43	1/1:-81.3707,-7.82678,0:26:0:26:931:0:0,26	.	.	1/1:-74.196,-6.92369,0:23:0:23:861:0:0,23	1/1:-115.21,-11.1381,0:37:0:37:1323:0:0,37	.	.	.	.	.	1/1:-155.192,-15.0515,0:50:0:50:1815:0:0,50	.	.	.	1/1:-131.437,-12.3422,0:41:0:41:1511:0:0,41	1/1:-102.042,-9.63296,0:32:0:32:1172:0:0,32	.	.	1/1:-68.2832,-6.32163,0:21:0:21:783:0:0,21	1/1:-189.477,-18.0618,0:60:0:60:2195:0:0,60	.	.	.	.	.	.	.	.	.	.	.
+chr6	123851610	.	G	A	592.95	.	AB=0;ABP=0;AC=18;AF=1;AN=20;AO=25;CIGAR=1X;DP=232;DPB=25;DPRA=0;EPP=3.09716;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=39;MQMR=0;NS=1;NUMALT=1;ODDS=39.2625;PAIRED=0.92;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=927;QR=0;RO=0;RPL=9;RPP=7.26639;RPPR=0;RPR=16;RUN=1;SAF=19;SAP=17.6895;SAR=6;SF=3,5,6,9,10,16,20,21,24,25;SRF=0;SRP=0;SRR=0;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	1/1:-75.9009,-7.52575,0:25:0:25:927:0:0,25	.	0/1:-42.083,0,-38.3451:32:15:17:634:550:15,17	1/1:-26.5302,-2.70927,0:9:0:9:317:0:0,9	.	.	1/1:-34.742,-3.31133,0:11:0:11:428:0:0,11	1/1:-75.5497,-7.22472,0:24:0:24:882:0:0,24	.	.	.	.	.	1/1:-71.408,-7.22472,0:24:0:24:881:0:0,24	.	.	.	1/1:-62.105,-6.0206,0:20:0:20:758:0:0,20	1/1:-79.1826,-7.22472,0:24:0:24:912:0:0,24	.	.	0/1:-28.1961,0,-11.6926:16:5:11:391:186:5,11	1/1:-147.369,-14.1484,0:47:0:47:1743:0:0,47	.	.	.	.	.	.	.	.	.	.	.
+chr6	123869607	.	G	C	3085.31	.	AB=0;ABP=0;AC=14;AF=1;AN=18;AO=134;CIGAR=1X;DP=1189;DPB=134;DPRA=0;EPP=7.15878;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=41.9851;MQMR=0;NS=1;NUMALT=1;ODDS=190.369;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=5009;QR=0;RO=0;RPL=18;RPP=158.643;RPPR=0;RPR=116;RUN=1;SAF=77;SAP=9.49231;SAR=57;SF=5,9,10,12,16,20,21,24,25;SRF=0;SRP=0;SRR=0;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	1/1:-433.169,-40.338,0:134:0:134:5009:0:0,134	.	.	.	0/1:-80.3634,0,-148.652:89:55:34:1235:2024:55,34	1/1:-321.672,-30.103,0:100:0:100:3730:0:0,100	.	1/1:-616.69,-57.1957,0:190:0:190:7151:0:0,190	.	.	.	0/1:-148.741,0,-262.053:157:96:61:2295:3579:96,61	.	.	.	1/1:-460.629,-43.3483,0:145:0:144:5354:0:0,144	0/1:-119.136,0,-94.8927:83:39:44:1662:1391:39,44	.	.	0/1:-52.3913,0,-123.173:68:44:24:866:1658:44,24	1/1:-703.434,-65.5308,0:223:1:222:8154:16:1,222	.	.	.	.	.	.	.	.	.	.	.
+chr6	123869769	.	TAAAAAAAAAAAAAAAGAAAAAGTTTGTG	TAAAAAAAAAAAAAGAAAAAGTTTGTG	567.58	.	AB=0;ABP=0;AC=15;AF=1;AN=18;AO=35;CIGAR=1M2D24M;DP=350;DPB=44.5185;DPRA=0;EPP=35.8306;EPPR=0;GTI=0;LEN=2;MEANALT=8;MQM=40;MQMR=0;NS=1;NUMALT=1;ODDS=23.1864;PAIRED=0.942857;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1017;QR=0;RO=0;RPL=21;RPP=6.05036;RPPR=0;RPR=14;RUN=1;SAF=15;SAP=4.56135;SAR=20;SF=5,9,10,12,16,20,21,24,25;SRF=0;SRP=0;SRR=0;TYPE=del	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	1/1:.,.,0:48:0:35:1017:0:0,35	.	.	.	0/1:-11.7526,0,-6.21648:18:3:5:169:106:3,5	1/1:.,.,0:23:0:19:622:0:0,19	.	1/1:.,.,0:68:0:47:1589:0:0,47	.	.	.	1/1:.,.,0:30:0:20:602:0:0,20	.	.	.	1/1:.,.,0:38:1:24:728:37:1,24	0/1:.,.,-24.521:34:10:7:222:352:10,7	.	.	0/1:.,.,-15.1555:16:6:4:112:222:6,4	1/1:.,.,0:75:0:45:1532:0:0,45	.	.	.	.	.	.	.	.	.	.	.
+chr6	133782375	.	T	A	1307.19	.	AB=0.504673;ABP=3.03059;AC=4;AF=0.5;AN=8;AO=54;CIGAR=1X;DP=455;DPB=107;DPRA=0;EPP=4.45795;EPPR=14.851;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=41.6604;NS=1;NUMALT=1;ODDS=300.248;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2010;QR=2006;RO=53;RPL=41;RPP=34.5369;RPPR=32.8783;RPR=13;RUN=1;SAF=17;SAP=19.0953;SAR=37;SF=3,10,21,27;SRF=22;SRP=6.32897;SRR=31;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	0/1:-141.869,0,-140.975:107:53:54:2010:2006:53,54	.	.	.	.	.	.	0/1:-133.664,0,-126.862:100:49:51:1913:1836:49,51	.	.	.	.	.	.	.	.	.	.	0/1:-63.8853,0,-128.646:75:48:27:994:1743:48,27	.	.	.	.	.	0/1:-226.581,0,-221.675:173:87:86:3216:3165:87,86	.	.	.	.	.	.	.	.	.
+chr6	133783625	.	ATCTTCTG	ATCTG	386.21	.	AB=0.246154;ABP=75.7713;AC=1;AF=0.5;AN=2;AO=32;CIGAR=1M3D4M;DP=130;DPB=118;DPRA=0;EPP=9.79615;EPPR=5.22609;GTI=0;LEN=3;MEANALT=1;MQM=41.8125;MQMR=41.8061;NS=1;NUMALT=1;ODDS=88.9289;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1095;QR=3632;RO=98;RPL=12;RPP=7.35324;RPPR=4.4284;RPR=20;RUN=1;SAF=27;SAP=35.8538;SAR=5;SF=21;SRF=77;SRP=72.4974;SRR=21;TYPE=del	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-56.4696,0,-275.141:130:98:32:1095:3632:98,32	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr6	133789728	.	G	A	4341.43	.	AB=0;ABP=0;AC=11;AF=1;AN=20;AO=284;CIGAR=1X;DP=2948;DPB=284;DPRA=0;EPP=5.48761;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=41.7535;MQMR=0;NS=1;NUMALT=1;ODDS=398.313;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=10688;QR=0;RO=0;RPL=161;RPP=14.0512;RPPR=0;RPR=123;RUN=1;SAF=136;SAP=4.11133;SAR=148;SF=0,3,5,6,9,10,12,20,21,27;SRF=0;SRP=0;SRR=0;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	1/1:-919.724,-85.4925,0:284:0:284:10688:0:0,284	.	.	0/1:-330.081,0,-423.627:292:160:132:4836:5915:160,132	.	0/1:-567.395,0,-336.273:342:135:207:7769:5085:135,207	0/1:-266.991,0,-316.717:221:118:103:3868:4456:118,103	.	.	0/1:-309.295,0,-352.616:254:135:119:4464:5000:135,119	0/1:-361.331,0,-300.844:254:118:135:5078:4364:118,135	.	0/1:-425.531,0,-382.142:311:146:162:6008:5495:146,162	.	.	.	.	.	.	.	0/1:-511.347,0,-543.689:397:202:195:7301:7683:202,195	0/1:-241.571,0,-292.124:205:111:94:3516:4097:111,94	.	.	.	.	.	0/1:-497.462,0,-494.79:388:194:194:7129:7065:194,194	.	.	.	.	.	.	.	.	.
+chr6	133827354	.	A	G	771.60	.	AB=0;ABP=0;AC=17;AF=1;AN=26;AO=44;CIGAR=1X;DP=617;DPB=44;DPRA=0;EPP=3.0103;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=0;NS=1;NUMALT=1;ODDS=65.6021;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1649;QR=0;RO=0;RPL=38;RPP=53.5464;RPPR=0;RPR=6;RUN=1;SAF=16;SAP=10.1169;SAR=28;SF=0,3,5,6,9,10,12,16,20,21,24,25,27;SRF=0;SRP=0;SRR=0;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	1/1:-143.351,-13.2453,0:44:0:44:1649:0:0,44	.	.	0/1:-82.8189,0,-54.1397:52:21:31:1133:804:21,31	.	0/1:-68.5656,0,-41.1608:42:16:26:932:621:16,26	1/1:-89.6643,-8.42884,0:28:0:28:1030:0:0,28	.	.	0/1:-31.7488,0,-68.4202:38:25:13:496:918:25,13	0/1:-58.3723,0,-88.8864:59:33:25:871:1226:33,25	.	0/1:-118.616,0,-78.5723:76:32:44:1628:1168:32,44	.	.	.	0/1:-46.8344,0,-81.1179:48:29:19:706:1101:29,19	.	.	.	0/1:-51.2097,0,-35.8729:33:14:19:702:525:14,19	0/1:-28.2069,0,-41.8809:26:15:11:411:571:15,11	.	.	1/1:-84.7977,-7.82678,0:26:0:26:974:0:0,26	0/1:-111.295,0,-98.8367:80:38:42:1554:1416:38,42	.	1/1:-205.218,-19.567,0:65:0:65:2356:0:0,65	.	.	.	.	.	.	.	.	.
+chr6	133849966	.	C	T	2128.58	.	AB=0.544776;ABP=5.34382;AC=10;AF=0.5;AN=18;AO=73;CIGAR=1X;DP=1246;DPB=134;DPRA=0;EPP=9.70319;EPPR=3.33068;GTI=0;LEN=1;MEANALT=1;MQM=41.726;MQMR=42;NS=1;NUMALT=1;ODDS=342.208;PAIRED=0.986301;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2772;QR=2321;RO=61;RPL=58;RPP=58.011;RPPR=51.7438;RPR=15;RUN=1;SAF=39;SAP=3.75395;SAR=34;SF=0,3,6,10,16,21,24,25,27;SRF=30;SRP=3.0459;SRR=31;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	0/1:-197.986,0,-160.155:134:61:73:2772:2321:61,73	.	.	0/1:-164.939,0,-188.363:133:71:62:2387:2643:71,62	.	.	0/1:-134.549,0,-139.619:104:53:51:1919:1974:53,51	.	.	.	0/1:-142.318,0,-151.837:112:58:54:2060:2147:58,54	.	.	.	.	.	0/1:-186.355,0,-206.389:147:76:71:2679:2910:76,71	.	.	.	.	0/1:-54.5993,0,-230.515:109:81:28:1029:3060:81,28	.	.	0/1:-83.8548,0,-72.5208:58:27:31:1170:1040:27,31	0/1:-360.331,0,-256.322:231:100:131:4981:3779:100,131	.	1/1:-706.343,-65.3235,0:218:0:217:8185:0:0,217	.	.	.	.	.	.	.	.	.
+chr6	152443744	.	G	T	7437.88	.	AB=0.48816;ABP=3.67875;AC=2;AF=0.5;AN=4;AO=268;CIGAR=1X;DP=1128;DPB=549;DPRA=0;EPP=7.67735;EPPR=3.38896;GTI=0;LEN=1;MEANALT=1;MQM=41.903;MQMR=41.9929;NS=1;NUMALT=1;ODDS=1610.7;PAIRED=0.996269;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=10134;QR=10560;RO=281;RPL=152;RPP=13.5112;RPPR=39.8017;RPR=116;RUN=1;SAF=128;SAP=4.17706;SAR=140;SF=5,20;SRF=141;SRP=3.01803;SRR=140;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	0/1:-708.623,0,-746.739:549:281:268:10134:10560:281,268	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-800.705,0,-734.312:579:277:302:11388:10523:277,302	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr6	152453291	.	G	A	4604.57	.	AB=0.378747;ABP=49.8774;AC=2;AF=0.5;AN=4;AO=139;CIGAR=1X;DP=898;DPB=367;DPRA=0;EPP=8.64988;EPPR=3.9627;GTI=0;LEN=1;MEANALT=1;MQM=41.4676;MQMR=41.9912;NS=1;NUMALT=1;ODDS=758.669;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=5275;QR=8398;RO=228;RPL=76;RPP=5.65044;RPPR=19.8106;RPR=63;RUN=1;SAF=64;SAP=4.90057;SAR=75;SF=9,27;SRF=104;SRP=6.8199;SRR=124;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	0/1:-342.11,0,-616.832:367:228:139:5275:8398:228,139	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-600.109,0,-775.521:531:293:237:8775:10826:293,237	.	.	.	.	.	.	.	.	.
+chr6	152454618	.	T	C	3409.72	.	AB=0.487544;ABP=3.38896;AC=1;AF=0.5;AN=2;AO=137;CIGAR=1X;DP=281;DPB=281;DPRA=0;EPP=38.0233;EPPR=63.28;GTI=0;LEN=1;MEANALT=2;MQM=41.9416;MQMR=41.8322;NS=1;NUMALT=1;ODDS=785.116;PAIRED=1;PAIREDR=0.993007;PAO=0;PQA=0;PQR=0;PRO=0;QA=5061;QR=5397;RO=143;RPL=60;RPP=7.591;RPPR=14.0803;RPR=77;RUN=1;SAF=53;SAP=18.2423;SAR=84;SF=25;SRF=60;SRP=11.0432;SRR=83;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-353.35,0,-381.24:281:143:137:5061:5397:143,137	.	.	.	.	.	.	.	.	.	.	.
+chr6	152464839	.	A	G	5552.82	.	AB=0.526611;ABP=5.2061;AC=12;AF=0.5;AN=20;AO=188;CIGAR=1X;DP=3333;DPB=357;DPRA=0;EPP=3.0565;EPPR=4.30284;GTI=0;LEN=1;MEANALT=2;MQM=42;MQMR=42;NS=1;NUMALT=1;ODDS=937.622;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=6943;QR=6136;RO=168;RPL=150;RPP=147.898;RPPR=107.706;RPR=38;RUN=1;SAF=97;SAP=3.42611;SAR=91;SF=0,3,5,6,10,12,16,20,21,24;SRF=82;SRP=3.21711;SRR=86;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	0/1:-494.041,0,-425.57:357:168:188:6943:6136:168,188	.	.	0/1:-452.825,0,-481.719:363:185:176:6500:6822:185,176	.	1/1:-1312.75,-120.745,0:413:1:412:15206:37:1,412	0/1:-371.32,0,-404.929:302:157:145:5329:5734:157,145	.	.	.	0/1:-428.446,0,-420.379:327:164:163:6086:6018:164,163	.	0/1:-633.299,0,-582.126:468:227:240:8939:8327:227,240	.	.	.	1/1:-964.884,-90.008,0:300:0:299:11158:0:0,299	.	.	.	0/1:-514.849,0,-558.709:415:217:198:7388:7883:217,198	0/1:-396.793,0,-83.0502:193:47:144:5244:1610:47,144	.	.	0/1:-207.361,0,-284.39:195:111:84:3073:3943:111,84	.	.	.	.	.	.	.	.	.	.	.	.
+chr6	152466674	.	T	C	2477.80	.	AB=0.436937;ABP=10.6789;AC=6;AF=0.5;AN=12;AO=97;CIGAR=1X;DP=1291;DPB=222;DPRA=0;EPP=4.10723;EPPR=10.015;GTI=0;LEN=1;MEANALT=2;MQM=41.567;MQMR=42;NS=1;NUMALT=1;ODDS=489.513;PAIRED=1;PAIREDR=0.983871;PAO=0;PQA=0;PQR=0;PRO=0;QA=3360;QR=4532;RO=124;RPL=67;RPP=33.6572;RPPR=4.13106;RPR=30;RUN=1;SAF=46;SAP=3.56996;SAR=51;SF=0,5,12,20,21,24;SRF=66;SRP=4.13106;SRR=58;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	0/1:-223.13,0,-326.383:222:124:97:3360:4532:124,97	.	.	.	.	0/1:-321.279,0,-318.66:252:125:127:4572:4551:125,127	.	.	.	.	.	.	0/1:-316.675,0,-436.944:294:164:130:4665:6060:164,130	.	.	.	.	.	.	.	0/1:-311.629,0,-307.815:243:119:124:4436:4414:119,124	0/1:-195.464,0,-162.082:147:67:80:2745:2380:67,80	.	.	0/1:-172.238,0,-156.564:133:62:71:2431:2283:62,71	.	.	.	.	.	.	.	.	.	.	.	.
+chr6	152469188	.	C	G	895.89	.	AB=0.481928;ABP=3.24576;AC=6;AF=0.5;AN=12;AO=40;CIGAR=1X;DP=488;DPB=83;DPRA=0;EPP=6.48466;EPPR=5.48477;GTI=0;LEN=1;MEANALT=1;MQM=41.9;MQMR=42;NS=1;NUMALT=1;ODDS=208.223;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1431;QR=1606;RO=43;RPL=9;RPP=29.2851;RPPR=21.2406;RPR=31;RUN=1;SAF=25;SAP=8.43898;SAR=15;SF=0,5,12,20,21,24;SRF=30;SRP=17.6046;SRR=13;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	0/1:-99.7961,0,-114.364:83:43:40:1431:1606:43,40	.	.	.	.	0/1:-115.264,0,-149.05:102:56:46:1678:2071:56,46	.	.	.	.	.	.	0/1:-82.424,0,-152.312:91:57:34:1265:2069:57,34	.	.	.	.	.	.	.	0/1:-157.083,0,-145.913:118:58:60:2222:2088:58,60	0/1:-83.1383,0,-47.787:52:20:32:1134:729:20,32	.	.	0/1:-59.6311,0,-44.925:42:18:22:827:658:18,22	.	.	.	.	.	.	.	.	.	.	.	.
+chr6	152469331	.	C	T	2910.18	.	AB=0.537634;ABP=6.44263;AC=4;AF=0.5;AN=8;AO=150;CIGAR=1X;DP=989;DPB=279;DPRA=0;EPP=14.3599;EPPR=10.4337;GTI=0;LEN=1;MEANALT=1;MQM=41.8733;MQMR=42;NS=1;NUMALT=1;ODDS=737.657;PAIRED=0.993333;PAIREDR=0.984496;PAO=0;PQA=0;PQR=0;PRO=0;QA=5545;QR=4759;RO=129;RPL=64;RPP=10.0169;RPPR=13.531;RPR=86;RUN=1;SAF=83;SAP=6.71628;SAR=67;SF=0,12,21,24;SRF=64;SRP=3.02713;SRR=65;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	0/1:-396.424,0,-329.278:279:129:150:5545:4759:129,150	.	.	.	.	.	.	.	.	.	.	.	0/1:-558.913,0,-573.945:439:221:217:7969:8142:221,217	.	.	.	.	.	.	.	.	0/1:-48.0683,0,-287.565:133:103:29:1004:3774:103,29	.	.	0/1:-204.116,0,-150.357:138:60:77:2834:2236:60,77	.	.	.	.	.	.	.	.	.	.	.	.
+chr6	152470752	.	C	A	3558.12	.	AB=0.40991;ABP=34.3108;AC=3;AF=0.5;AN=6;AO=182;CIGAR=1X;DP=1124;DPB=444;DPRA=0;EPP=8.78498;EPPR=9.07545;GTI=0;LEN=1;MEANALT=2;MQM=41.8791;MQMR=41.9234;NS=1;NUMALT=1;ODDS=993.919;PAIRED=0.994505;PAIREDR=0.992337;PAO=0;PQA=0;PQR=0;PRO=0;QA=6741;QR=9835;RO=261;RPL=119;RPP=40.4264;RPPR=49.8093;RPR=63;RUN=1;SAF=71;SAP=22.1002;SAR=111;SF=5,20,21;SRF=118;SRP=8.21019;SRR=143;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	0/1:-448.101,0,-715.202:444:261:182:6741:9835:261,182	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-616.891,0,-525.657:443:206:237:8697:7626:206,237	0/1:-71.9655,0,-525.355:237:190:45:1651:6885:190,45	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr6	152473181	.	T	C	6151.30	.	AB=0.451289;ABP=17.3955;AC=3;AF=0.5;AN=6;AO=315;CIGAR=1X;DP=1629;DPB=698;DPRA=0;EPP=28.6612;EPPR=52.047;GTI=0;LEN=1;MEANALT=1;MQM=41.7492;MQMR=41.8747;NS=1;NUMALT=1;ODDS=1786.88;PAIRED=0.987302;PAIREDR=0.994778;PAO=0;PQA=0;PQR=0;PRO=0;QA=11567;QR=14344;RO=383;RPL=177;RPP=13.4954;RPPR=42.0685;RPR=138;RUN=1;SAF=156;SAP=3.07234;SAR=159;SF=5,20,21;SRF=192;SRP=3.01597;SRR=191;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	0/1:-788.66,0,-1027.05:698:383:315:11567:14344:383,315	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-1001.95,0,-777.384:693:306:386:13991:11462:306,386	0/1:-108.367,0,-501.209:238:180:57:2086:6621:180,57	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr6	152529122	.	G	A	2980.07	.	AB=0.470817;ABP=4.91139;AC=1;AF=0.5;AN=2;AO=121;CIGAR=1X;DP=257;DPB=257;DPRA=0;EPP=6.04318;EPPR=3.07417;GTI=0;LEN=1;MEANALT=1;MQM=40.9174;MQMR=41.6691;NS=1;NUMALT=1;ODDS=686.186;PAIRED=1;PAIREDR=0.970588;PAO=0;PQA=0;PQR=0;PRO=0;QA=4505;QR=5059;RO=136;RPL=57;RPP=3.88966;RPPR=31.1756;RPR=64;RUN=1;SAF=70;SAP=9.48883;SAR=51;SF=10;SRF=76;SRP=7.09778;SRR=60;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	0/1:-305.955,0,-357.128:257:136:121:4505:5059:136,121	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr6	152529260	.	GAT	AAT	3285.85	.	AB=0.527027;ABP=5.35784;AC=6;AF=0.5;AN=12;AO=195;CIGAR=1X;DP=1960;DPB=370;DPRA=0;EPP=39.1904;EPPR=12.7944;GTI=0;LEN=1;MEANALT=2;MQM=40.9897;MQMR=40.8506;NS=1;NUMALT=1;ODDS=811.914;PAIRED=0.974359;PAIREDR=0.971264;PAO=0;PQA=0;PQR=0;PRO=0;QA=6711;QR=5530;RO=174;RPL=142;RPP=91.2166;RPPR=50.9824;RPR=53;RUN=1;SAF=92;SAP=4.35773;SAR=103;SF=0,9,16,21,24,25;SRF=83;SRP=3.809;SRR=91;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	0/1:.,.,-365.839:370:174:195:6711:5530:174,195	.	.	.	.	.	.	.	.	0/1:-262.695,0,-227.998:259:112:111:3814:3421:112,111	.	.	.	.	.	.	0/1:-452.704,0,-310.054:392:148:183:6382:4764:148,183	.	.	.	.	0/1:.,.,-337.492:187:138:48:1546:4508:138,48	.	.	0/1:-181.684,0,-217.885:205:95:81:2703:3104:95,81	0/1:-617.703,0,-459.131:547:222:254:8768:6944:222,254	.	.	.	.	.	.	.	.	.	.	.
+chr6	152540278	.	A	C	14931.68	.	AB=0;ABP=0;AC=25;AF=1;AN=26;AO=446;CIGAR=1X;DP=6449;DPB=446;DPRA=0;EPP=17.2076;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=41.991;MQMR=0;NS=1;NUMALT=1;ODDS=622.892;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=16766;QR=0;RO=0;RPL=301;RPP=121.497;RPPR=0;RPR=145;RUN=1;SAF=187;SAP=28.25;SAR=259;SF=0,3,5,6,9,10,12,16,20,21,24,25,27;SRF=0;SRP=0;SRR=0;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	1/1:-1447.32,-134.259,0:446:0:446:16766:0:0,446	.	.	1/1:-1466.6,-136.066,0:452:0:452:17069:0:0,452	.	1/1:-1798.86,-166.572,0:555:1:553:20936:16:1,553	1/1:-1379.1,-127.637,0:424:0:424:15980:0:0,424	.	.	1/1:-1333.07,-122.693,0:418:2:416:15517:34:2,416	1/1:-1662.77,-150.363,0:507:1:506:19340:33:1,506	.	1/1:-2117.11,-194.448,0:651:1:650:24627:16:1,650	.	.	.	1/1:-1787.56,-164.362,0:546:0:546:20771:0:0,546	.	.	.	0/1:-882.386,0,-809.415:638:306:331:12443:11642:306,331	1/1:-856.872,-79.0771,0:268:1:267:9928:16:1,267	.	.	1/1:-870.959,-80.9771,0:269:0:269:10101:0:0,269	1/1:-2193.67,-205.001,0:681:0:681:25412:0:0,681	.	1/1:-1927.27,-178.812,0:594:0:594:22347:0:0,594	.	.	.	.	.	.	.	.	.
+chr6	152542548	.	A	G	872.39	.	AB=0.546512;ABP=4.62628;AC=5;AF=0.5;AN=10;AO=47;CIGAR=1X;DP=409;DPB=86;DPRA=0;EPP=8.60069;EPPR=5.73856;GTI=0;LEN=1;MEANALT=1;MQM=41.9574;MQMR=42;NS=1;NUMALT=1;ODDS=211.785;PAIRED=1;PAIREDR=0.974359;PAO=0;PQA=0;PQR=0;PRO=0;QA=1697;QR=1447;RO=39;RPL=17;RPP=10.8184;RPPR=12.42;RPR=30;RUN=1;SAF=32;SAP=16.3625;SAR=15;SF=3,6,10,12,21;SRF=26;SRP=12.42;SRR=13;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	0/1:-121.685,0,-100.028:86:39:47:1697:1447:39,47	.	.	0/1:-102.337,0,-79.5548:72:31:40:1422:1164:31,40	.	.	.	0/1:-91.1275,0,-69.9717:64:28:36:1267:1028:28,36	.	0/1:-141.807,0,-152.962:112:58:54:2024:2154:58,54	.	.	.	.	.	.	.	.	0/1:-30.6583,0,-157.053:75:58:17:610:2063:58,17	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr6	152545665	.	G	A	1734.72	.	AB=0.515625;ABP=3.28173;AC=1;AF=0.5;AN=2;AO=66;CIGAR=1X;DP=128;DPB=128;DPRA=0;EPP=3.53672;EPPR=3.15039;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=42;NS=1;NUMALT=1;ODDS=356.357;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2538;QR=2323;RO=62;RPL=25;RPP=11.433;RPPR=23.184;RPR=41;RUN=1;SAF=36;SAP=4.19474;SAR=30;SF=3;SRF=29;SRP=3.57068;SRR=33;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	0/1:-180.686,0,-163.036:128:62:66:2538:2323:62,66	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr6	152555057	.	T	A	6300.44	.	AB=0.528889;ABP=6.27233;AC=1;AF=0.5;AN=2;AO=238;CIGAR=1X;DP=450;DPB=450;DPRA=0;EPP=5.346;EPPR=5.9845;GTI=0;LEN=1;MEANALT=2;MQM=41.9664;MQMR=41.8294;NS=1;NUMALT=1;ODDS=1252.74;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=8970;QR=7999;RO=211;RPL=117;RPP=3.15628;RPPR=3.02059;RPR=121;RUN=1;SAF=138;SAP=16.1851;SAR=100;SF=5;SRF=124;SRP=17.0991;SRR=87;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	0/1:-639.246,0,-553.322:450:211:238:8970:7999:211,238	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr6	152555112	.	C	T	6184.47	.	AB=0.487097;ABP=3.4586;AC=4;AF=0.5;AN=6;AO=151;CIGAR=1X;DP=1016;DPB=310;DPRA=0;EPP=22.6974;EPPR=14.4959;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=42;NS=1;NUMALT=1;ODDS=869.014;PAIRED=0.986755;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=5586;QR=5812;RO=159;RPL=101;RPP=40.4143;RPPR=5.31834;RPR=50;RUN=1;SAF=74;SAP=3.13973;SAR=77;SF=0,5,9;SRF=59;SRP=25.9678;SRR=100;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	0/1:-390.139,0,-411.484:310:159:151:5586:5812:159,151	.	.	.	.	0/1:-582.699,0,-478.235:411:188:222:8164:6956:188,222	.	.	.	1/1:-919.056,-88.5028,0:295:0:294:10622:0:0,294	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr6	152565669	.	C	T	1957.35	.	AB=0.596774;ABP=13.0971;AC=2;AF=0.5;AN=4;AO=74;CIGAR=1X;DP=283;DPB=124;DPRA=0;EPP=3.47981;EPPR=3.0103;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=42;NS=1;NUMALT=1;ODDS=249.574;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2732;QR=1776;RO=50;RPL=22;RPP=29.4201;RPPR=20.3821;RPR=52;RUN=1;SAF=41;SAP=4.88833;SAR=33;SF=0,16;SRF=30;SRP=7.35324;SRR=20;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	0/1:-199.834,0,-117.568:124:50:74:2732:1776:50,74	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-209.897,0,-198.829:159:79:79:2972:2833:79,79	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr6	152570274	.	A	G	453.96	.	AB=0.5;ABP=3.0103;AC=1;AF=0.5;AN=2;AO=19;CIGAR=1X;DP=38;DPB=38;DPRA=0;EPP=5.8675;EPPR=5.8675;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=42;NS=1;NUMALT=1;ODDS=94.8212;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=730;QR=713;RO=19;RPL=6;RPP=8.61041;RPPR=36.0395;RPR=13;RUN=1;SAF=13;SAP=8.61041;SAR=6;SF=9;SRF=8;SRP=4.03889;SRR=11;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	0/1:-51.8762,0,-50.3703:38:19:19:730:713:19,19	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr6	152570415	.	G	A	947.50	.	AB=0;ABP=0;AC=15;AF=1;AN=22;AO=59;CIGAR=1X;DP=575;DPB=59;DPRA=0;EPP=22.4799;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=0;NS=1;NUMALT=1;ODDS=86.3965;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=2270;QR=0;RO=0;RPL=43;RPP=29.8409;RPPR=0;RPR=16;RUN=1;SAF=25;SAP=5.99147;SAR=34;SF=0,3,5,6,9,10,12,16,20,21,24;SRF=0;SRP=0;SRR=0;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	1/1:-196.025,-17.7608,0:59:0:59:2270:0:0,59	.	.	0/1:-73.5475,0,-75.1228:56:28:28:1042:1059:28,28	.	1/1:-135.535,-12.3422,0:41:0:41:1571:0:0,41	0/1:-48.6924,0,-53.6087:40:21:19:699:753:21,19	.	.	0/1:-62.7646,0,-71.7089:53:28:25:907:1006:28,25	0/1:-82.8297,0,-60.7733:54:24:30:1143:886:24,30	.	0/1:-122.058,0,-120.54:92:46:46:1729:1709:46,46	.	.	.	1/1:-221.605,-20.169,0:67:0:67:2565:0:0,67	.	.	.	0/1:-54.9973,0,-53.0893:42:21:21:779:755:21,21	0/1:-59.2392,0,-65.8561:50:27:23:856:922:27,23	.	.	1/1:-65.8156,-6.32163,0:21:0:21:756:0:0,21	.	.	.	.	.	.	.	.	.	.	.	.
+chr6	152577752	.	T	C	3603.10	.	AB=0.563265;ABP=11.5278;AC=3;AF=0.5;AN=6;AO=138;CIGAR=1X;DP=840;DPB=245;DPRA=0;EPP=19.1233;EPPR=10.3365;GTI=0;LEN=1;MEANALT=1;MQM=41.9855;MQMR=41.8318;NS=1;NUMALT=1;ODDS=600.602;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=4967;QR=4042;RO=107;RPL=43;RPP=45.5586;RPPR=44.1059;RPR=95;RUN=1;SAF=84;SAP=17.1721;SAR=54;SF=0,16,20;SRF=67;SRP=17.8047;SRR=40;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	0/1:-357.757,0,-274.732:245:107:138:4967:4042:107,138	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-403.7,0,-402.359:306:151:155:5732:5739:151,155	.	.	.	0/1:-369.244,0,-376.577:289:145:144:5257:5386:145,144	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr6	152615200	.	G	A	5672.55	.	AB=0.538462;ABP=6.51806;AC=5;AF=0.5;AN=8;AO=147;CIGAR=1X;DP=1289;DPB=273;DPRA=0;EPP=4.20683;EPPR=4.11327;GTI=0;LEN=1;MEANALT=1;MQM=41.4694;MQMR=42;NS=1;NUMALT=1;ODDS=719.301;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=5556;QR=4638;RO=126;RPL=68;RPP=4.7977;RPPR=4.73369;RPR=79;RUN=1;SAF=61;SAP=12.2428;SAR=86;SF=0,5,6,12;SRF=55;SRP=7.42218;SRR=71;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	0/1:-394.27,0,-320.222:273:126:147:5556:4638:126,147	.	.	.	.	1/1:-1134.43,-104.758,0:348:0:348:13157:0:0,348	0/1:-313.348,0,-327.195:241:124:117:4471:4614:124,117	.	.	.	.	.	0/1:-461.485,0,-661.713:427:245:182:6867:9156:245,182	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr6	152629617	.	C	T	3562.19	.	AB=0.449275;ABP=6.09442;AC=9;AF=0.5;AN=14;AO=62;CIGAR=1X;DP=1351;DPB=138;DPRA=0;EPP=19.9618;EPPR=18.3264;GTI=0;LEN=1;MEANALT=2;MQM=40.871;MQMR=41.92;NS=1;NUMALT=1;ODDS=340.626;PAIRED=0.983871;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2330;QR=2690;RO=75;RPL=27;RPP=5.25182;RPPR=9.52472;RPR=35;RUN=1;SAF=35;SAP=5.25182;SAR=27;SF=0,6,10,12,20,25,27;SRF=44;SRP=7.90335;SRR=31;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	0/1:-156.5,0,-192.144:138:75:62:2330:2690:75,62	.	.	.	.	.	0/1:-199.166,0,-197.081:151:76:75:2843:2801:76,75	.	.	.	0/1:-235.848,0,-170.897:154:67:87:3266:2513:67,87	.	1/1:-600.242,-55.1906,0:189:1:188:6996:18:1,188	.	.	.	.	.	.	.	0/1:-301.88,0,-233.07:207:93:114:4221:3436:93,114	.	.	.	.	0/1:-296.589,0,-406.518:269:153:116:4366:5675:153,116	.	1/1:-783.376,-73.1503,0:243:0:243:9087:0:0,243	.	.	.	.	.	.	.	.	.
+chr6	152629631	.	C	T	1992.79	.	AB=0.465909;ABP=4.78696;AC=1;AF=0.5;AN=2;AO=82;CIGAR=1X;DP=176;DPB=176;DPRA=0;EPP=3.434;EPPR=3.84193;GTI=0;LEN=1;MEANALT=1;MQM=40.6829;MQMR=41.617;NS=1;NUMALT=1;ODDS=458.857;PAIRED=0.987805;PAIREDR=0.989362;PAO=0;PQA=0;PQR=0;PRO=0;QA=3053;QR=3474;RO=94;RPL=32;RPP=11.5903;RPPR=10.4949;RPR=50;RUN=1;SAF=43;SAP=3.434;SAR=39;SF=5;SRF=56;SRP=10.4949;SRR=38;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	0/1:-206.784,0,-247.284:176:94:82:3053:3474:94,82	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr6	152629772	.	GAAAAAAAAAAAAAACAGAAAGATAGAC	GAAAAAAAAAAAAACAGAAAGATAGAC,GAAAAAAAAAAAACAGAAAGATAGAC	1057.32	.	AB=0.353659;ABP=18.2636;AC=10,2;AF=0.5;AN=18;AO=29;CIGAR=1M1D26M;DP=952;DPB=80.4643;DPRA=0;EPP=6.67934;EPPR=8.35546;GTI=0;LEN=1;MEANALT=20;MQM=40.8276;MQMR=42;NS=1;NUMALT=1;ODDS=121.1;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=878;QR=949;RO=26;RPL=21;RPP=15.6647;RPPR=8.35546;RPR=8;RUN=1;SAF=10;SAP=9.07545;SAR=19;SF=0,5,6,10,12,16,20,25,27;SRF=8;SRP=11.3621;SRR=18;TYPE=del	GT:GL:DP:RO:AO:QA:QR:AD	0/1:-60.3142,0,-66.2141,.,.,.:82:26:29,.:878,.:949:26,29	.	.	.	.	0/1:-82.7695,0,-64.1581,.,.,.:92:29:39,.:1235,.:1018:29,39	0/1:-28.9163,0,-53.4292,.,.,.:49:20:14,.:446,.:729:20,14	.	.	.	0/1:-69.5454,0,-16.0599,.,.,.:66:11:31,.:994,.:382:11,31	.	1/2:-190.687,-32.7387,-26.4094,-147.448,0,-153.151:108:5:61,21:2067,615:187:5,61,21	.	.	.	0/1:-17.4997,0,-144.699,.,.,.:96:54:14,.:448,.:1951:54,14	.	.	.	1/1:-216.461,-18.442,0,.,.,.:129:3:82,.:2591,.:110:3,82	.	.	.	.	0/1:-141.078,0,-173.354,.,.,.:177:69:60,.:2063,.:2425:69,60	.	1/2:-251.038,-29.8981,-29.6728,-197.009,0,-217.242:153:11:92,24:2909,769:388:11,92,24	.	.	.	.	.	.	.	.	.
+chr6	152640110	.	G	A	2001.33	.	AB=0.573427;ABP=9.70694;AC=1;AF=0.5;AN=2;AO=82;CIGAR=1X;DP=143;DPB=143;DPRA=0;EPP=3.0103;EPPR=3.0459;GTI=0;LEN=1;MEANALT=1;MQM=41.5122;MQMR=42;NS=1;NUMALT=1;ODDS=316.314;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2938;QR=2176;RO=61;RPL=61;RPP=45.3805;RPPR=32.9481;RPR=21;RUN=1;SAF=44;SAP=3.96363;SAR=38;SF=9;SRF=32;SRP=3.33068;SRR=29;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	0/1:-211.605,0,-147.293:143:61:82:2938:2176:61,82	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr6	152646279	.	G	C	3309.72	.	AB=0.452459;ABP=8.99787;AC=1;AF=0.5;AN=2;AO=138;CIGAR=1X;DP=305;DPB=305;DPRA=0;EPP=10.6262;EPPR=12.4894;GTI=0;LEN=1;MEANALT=1;MQM=41.4783;MQMR=41.8623;NS=1;NUMALT=1;ODDS=762.091;PAIRED=0.985507;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=5060;QR=6022;RO=167;RPL=95;RPP=45.5586;RPPR=27.0525;RPR=43;RUN=1;SAF=79;SAP=9.30442;SAR=59;SF=9;SRF=92;SRP=6.76812;SRR=75;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	0/1:-344.132,0,-429.644:305:167:138:5060:6022:167,138	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr6	152647194	.	C	T	19.12	.	AB=0.181818;ABP=32.0291;AC=1;AF=0.5;AN=2;AO=6;CIGAR=1X;DP=33;DPB=33;DPRA=0;EPP=8.80089;EPPR=5.02092;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=42;NS=1;NUMALT=1;ODDS=4.39013;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=233;QR=978;RO=27;RPL=2;RPP=4.45795;RPPR=3.73412;RPR=4;RUN=1;SAF=5;SAP=8.80089;SAR=1;SF=21;SRF=7;SRP=16.6021;SRR=20;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-10.4824,0,-75.3209:33:27:6:233:978:27,6	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr6	152647681	.	A	T	6898.98	.	AB=0;ABP=0;AC=17;AF=1;AN=24;AO=303;CIGAR=1X;DP=3836;DPB=303;DPRA=0;EPP=6.80142;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=41.8614;MQMR=0;NS=1;NUMALT=1;ODDS=424.652;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=11490;QR=0;RO=0;RPL=160;RPP=5.08144;RPPR=0;RPR=143;RUN=1;SAF=169;SAP=11.7894;SAR=134;SF=0,3,5,6,9,10,12,16,21,24,25,27;SRF=0;SRP=0;SRR=0;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	1/1:-990.137,-91.2121,0:303:0:303:11490:0:0,303	.	.	0/1:-383.398,0,-329.669:273:129:142:5389:4761:129,142	.	0/1:-526.292,0,-496.173:390:191:198:7477:7095:191,198	0/1:-270.024,0,-359.337:240:135:105:3963:4989:135,105	.	.	0/1:-379.154,0,-355.053:281:136:145:5393:5081:136,145	1/1:-914.257,-85.1915,0:283:0:283:10625:0:0,283	.	1/1:-1350.57,-126.433,0:420:0:420:15745:0:0,420	.	.	.	1/1:-1016.26,-93.6203,0:311:0:311:11798:0:0,311	.	.	.	.	0/1:-261.677,0,-249.245:199:98:99:3710:3560:98,99	.	.	0/1:-244.049,0,-265.97:195:102:93:3524:3768:102,93	0/1:-719.546,0,-673.216:530:257:273:10191:9634:257,273	.	1/1:-1311.38,-123.723,0:411:0:411:15188:0:0,411	.	.	.	.	.	.	.	.	.
+chr6	152650903	.	G	A	3356.04	.	AB=0.49635;ABP=3.042;AC=1;AF=0.5;AN=2;AO=136;CIGAR=1X;DP=274;DPB=274;DPRA=0;EPP=39.7976;EPPR=16.3403;GTI=0;LEN=1;MEANALT=2;MQM=42;MQMR=41.9854;NS=1;NUMALT=1;ODDS=772.757;PAIRED=0.992647;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=5119;QR=5092;RO=137;RPL=31;RPP=90.444;RPPR=69.9772;RPR=105;RUN=1;SAF=97;SAP=56.7223;SAR=39;SF=10;SRF=93;SRP=41.0665;SRR=44;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	0/1:-360.812,0,-358.814:274:137:136:5119:5092:137,136	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr6	152652034	.	A	T	5296.89	.	AB=0;ABP=0;AC=17;AF=1;AN=24;AO=272;CIGAR=1X;DP=3032;DPB=272;DPRA=0;EPP=3.04223;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=41.9853;MQMR=0;NS=1;NUMALT=1;ODDS=381.677;PAIRED=0.996324;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=10046;QR=0;RO=0;RPL=190;RPP=96.1281;RPPR=0;RPR=82;RUN=1;SAF=183;SAP=73.5512;SAR=89;SF=0,3,5,6,9,10,12,16,21,24,25,27;SRF=0;SRP=0;SRR=0;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	1/1:-871.735,-81.8802,0:272:0:272:10046:0:0,272	.	.	0/1:-314.512,0,-292.454:238:114:122:4449:4198:114,122	.	0/1:-366.928,0,-346.732:272:132:139:5204:4948:132,139	0/1:-259.756,0,-259.038:201:101:100:3692:3682:101,100	.	.	0/1:-252.548,0,-202.766:179:83:96:3523:2956:83,96	1/1:-692.053,-64.689,0:220:1:219:8013:16:1,219	.	1/1:-909.595,-84.319,0:290:2:288:10542:32:2,288	.	.	.	1/1:-719.144,-68.0328,0:228:0:226:8309:0:0,226	.	.	.	.	0/1:-230.152,0,-260.425:196:100:95:3340:3680:100,95	.	.	0/1:-187.907,0,-196.667:150:76:74:2683:2789:76,74	0/1:-555.616,0,-474.903:396:186:210:7800:6864:186,210	.	1/1:-1222.32,-115.662,0:390:1:388:14126:16:1,388	.	.	.	.	.	.	.	.	.
+chr6	152652599	.	G	A	5560.05	.	AB=0.516588;ABP=4.01885;AC=1;AF=0.5;AN=2;AO=218;CIGAR=1X;DP=422;DPB=422;DPRA=0;EPP=3.6478;EPPR=7.77458;GTI=0;LEN=1;MEANALT=3;MQM=41.8073;MQMR=41.9602;NS=1;NUMALT=1;ODDS=1148.61;PAIRED=0.990826;PAIREDR=0.985075;PAO=0;PQA=0;PQR=0;PRO=0;QA=8009;QR=7345;RO=201;RPL=89;RPP=18.9477;RPPR=48.6544;RPR=129;RUN=1;SAF=90;SAP=17.3938;SAR=128;SF=10;SRF=105;SRP=3.88537;SRR=96;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	0/1:-566.466,0,-511.328:422:201:218:8009:7345:201,218	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr6	152653037	.	T	C	2294.76	.	AB=0;ABP=0;AC=14;AF=1;AN=20;AO=120;CIGAR=1X;DP=1206;DPB=120;DPRA=0;EPP=29.1404;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=41.6667;MQMR=0;NS=1;NUMALT=1;ODDS=170.96;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=4392;QR=0;RO=0;RPL=85;RPP=48.2493;RPPR=0;RPR=35;RUN=1;SAF=28;SAP=77.1299;SAR=92;SF=0,3,5,6,10,12,16,21,25,27;SRF=0;SRP=0;SRR=0;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	1/1:-379.846,-36.1236,0:120:0:120:4392:0:0,120	.	.	0/1:-164.499,0,-115.292:108:45:63:2266:1705:45,63	.	0/1:-115.329,0,-163.676:106:60:46:1706:2264:60,46	0/1:-75.0219,0,-142.614:83:51:32:1148:1939:51,32	.	.	.	0/1:-125.251,0,-87.9738:84:35:47:1723:1311:35,47	.	1/1:-515.391,-48.7669,0:162:0:162:5953:0:0,162	.	.	.	1/1:-301.668,-27.9958,0:93:0:93:3476:0:0,93	.	.	.	.	0/1:-54.6107,0,-206.197:99:73:26:968:2724:73,26	.	.	.	0/1:-210.176,0,-280.757:185:102:83:3061:3914:102,83	.	1/1:-505.356,-49.971,0:166:0:166:5836:0:0,166	.	.	.	.	.	.	.	.	.
+chr6	152658062	.	C	G	4061.09	.	AB=0.538235;ABP=7.3277;AC=2;AF=0.5;AN=4;AO=183;CIGAR=1X;DP=600;DPB=340;DPRA=0;EPP=17.5461;EPPR=16.3019;GTI=0;LEN=1;MEANALT=1;MQM=41.7923;MQMR=42;NS=1;NUMALT=1;ODDS=922.312;PAIRED=0.994536;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=6876;QR=5945;RO=157;RPL=83;RPP=6.43957;RPPR=19.9533;RPR=100;RUN=1;SAF=104;SAP=10.4265;SAR=79;SF=5,9;SRF=77;SRP=3.13478;SRR=80;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	0/1:-491.047,0,-410.98:340:157:183:6876:5945:157,183	.	.	.	0/1:-339.367,0,-355.746:260:132:128:4837:5027:132,128	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr6	152658141	.	CT	AC,CC	5540.85	.	AB=0.439394,0.560606;ABP=9.32731,9.32731;AC=1,1;AF=0.5,0.5;AN=2;AO=87,111;CIGAR=2X,1M1X;DP=198;DPB=198;DPRA=0,0;EPP=44.9671,49.9806;EPPR=0;GTI=0;LEN=2,1;MEANALT=2,2;MQM=41.5632,41.9279;MQMR=0;NS=1;NUMALT=2;ODDS=463.46;PAIRED=1,0.981982;PAIREDR=0;PAO=0,0;PQA=0,0;PQR=0;PRO=0;QA=3166,4190;QR=0;RO=0;RPL=51,69;RPP=8.62618,17.2716;RPPR=0;RPR=36,42;RUN=1,1;SAF=36,50;SAP=8.62618,5.3774;SAR=51,61;SF=10;SRF=0;SRP=0;SRR=0;TYPE=mnp,snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	1/2:-576.442,-329.592,-303.402,-247.205,0,-213.791:198:0:87,111:3166,4190:0:0,87,111	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr6	152658142	.	T	C	3768.59	.	AB=0;ABP=0;AC=15;AF=1;AN=22;AO=194;CIGAR=1X;DP=2069;DPB=194;DPRA=0;EPP=35.6495;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=41.9072;MQMR=0;NS=1;NUMALT=1;ODDS=273.546;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=7127;QR=0;RO=0;RPL=120;RPP=26.695;RPPR=0;RPR=74;RUN=1;SAF=80;SAP=15.9496;SAR=114;SF=0,3,5,6,9,12,16,21,24,25,27;SRF=0;SRP=0;SRR=0;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	1/1:-617.886,-58.3998,0:194:0:194:7127:0:0,194	.	.	0/1:-240.845,0,-210.218:173:82:91:3372:3030:82,91	.	0/1:-269.197,0,-402.577:259:149:110:4000:5561:149,110	0/1:-183.401,0,-211.09:150:79:71:2638:2961:79,71	.	.	0/1:-215.648,0,-179.784:153:70:83:3021:2624:70,83	.	.	1/1:-799.103,-75.5585,0:252:0:251:9224:0:0,251	.	.	.	1/1:-519.07,-49.67,0:165:0:165:5998:0:0,165	.	.	.	.	0/1:-83.659,0,-138.053:88:51:36:1275:1924:51,36	.	.	0/1:-126.049,0,-65.9603:73:27:46:1702:1011:27,46	0/1:-346.135,0,-376.452:283:144:137:4980:5334:144,137	.	1/1:-875.788,-83.9874,0:279:0:279:10162:0:0,279	.	.	.	.	.	.	.	.	.
+chr6	152660451	.	G	A	680.37	.	AB=0.176471;ABP=95.7449;AC=2;AF=0.5;AN=4;AO=18;CIGAR=1X;DP=191;DPB=102;DPRA=0;EPP=20.3821;EPPR=89.9726;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=41.9762;NS=1;NUMALT=1;ODDS=22.7136;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=667;QR=3014;RO=84;RPL=6;RPP=7.35324;RPPR=3.1137;RPR=12;RUN=1;SAF=9;SAP=3.0103;SAR=9;SF=21,24;SRF=42;SRP=3.0103;SRR=42;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-27.3017,0,-231.677:102:84:18:667:3014:84,18	.	.	0/1:-136.607,0,-93.7634:89:38:51:1879:1385:38,51	.	.	.	.	.	.	.	.	.	.	.	.
+chr6	152665261	.	C	A	7284.58	.	AB=0;ABP=0;AC=16;AF=1;AN=22;AO=356;CIGAR=1X;DP=3773;DPB=358;DPRA=0;EPP=9.25633;EPPR=5.18177;GTI=0;LEN=1;MEANALT=2;MQM=41.9888;MQMR=42;NS=1;NUMALT=1;ODDS=492.63;PAIRED=0.997191;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=13190;QR=15;RO=1;RPL=178;RPP=3.0103;RPPR=5.18177;RPR=178;RUN=1;SAF=188;SAP=5.45016;SAR=168;SF=0,3,6,10,12,16,20,21,24,25,27;SRF=1;SRP=5.18177;SRR=0;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	1/1:-1138.9,-106.128,0:358:1:356:13190:15:1,356	.	.	0/1:-474.134,0,-419.092:344:162:182:6713:6049:162,182	.	.	0/1:-392.25,0,-387.025:303:150:153:5574:5523:150,153	.	.	.	1/1:-844.143,-79.773,0:267:0:265:9793:0:0,265	.	1/1:-1449.09,-134.768,0:453:1:452:16824:16:1,452	.	.	.	1/1:-966.647,-90.315,0:305:1:304:11261:15:1,304	.	.	.	0/1:-616.688,0,-604.255:463:228:234:8766:8621:228,234	0/1:-125.682,0,-362.332:188:130:58:2099:4840:130,58	.	.	0/1:-294.155,0,-248.039:208:96:112:4147:3591:96,112	0/1:-602.928,0,-673.709:498:259:239:8712:9526:259,239	.	1/1:-1186.16,-116.198,0:386:0:386:13721:0:0,386	.	.	.	.	.	.	.	.	.
+chr6	152671475	.	A	C	2590.38	.	AB=0;ABP=0;AC=16;AF=1;AN=22;AO=99;CIGAR=1X;DP=1326;DPB=100;DPRA=0;EPP=24.0889;EPPR=5.18177;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=42;NS=1;NUMALT=1;ODDS=132.294;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3621;QR=38;RO=1;RPL=67;RPP=29.8795;RPPR=5.18177;RPR=32;RUN=1;SAF=39;SAP=12.6832;SAR=60;SF=0,3,6,10,12,16,20,21,24,25,27;SRF=0;SRP=5.18177;SRR=1;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	1/1:-310.708,-26.4485,0:100:1:99:3621:38:1,99	.	.	0/1:-130.23,0,-150.461:111:59:52:1881:2131:59,52	.	.	0/1:-138.394,0,-89.3753:87:35:52:1894:1332:35,52	.	.	.	1/1:-366.799,-34.9195,0:116:0:116:4224:0:0,116	.	1/1:-477.352,-46.0576,0:153:0:153:5514:0:0,153	.	.	.	1/1:-359.751,-28.2114,0:117:2:115:4263:77:2,115	.	.	.	0/1:-197.963,0,-141.312:132:57:75:2738:2084:57,75	0/1:-47.614,0,-118.967:66:45:21:775:1594:45,21	.	.	0/1:-61.2641,0,-85.4899:55:31:24:894:1175:31,24	0/1:-266.171,0,-233.145:198:93:105:3758:3386:93,105	.	1/1:-598.972,-57.4967,0:191:0:191:6908:0:0,191	.	.	.	.	.	.	.	.	.
+chr6	152671919	.	GAAAAAAAAATGAGC	GAAAAAAAAAATGAGC	2853.50	.	AB=0;ABP=0;AC=16;AF=1;AN=22;AO=142;CIGAR=1M1I14M;DP=1812;DPB=171.2;DPRA=0;EPP=3.56081;EPPR=3.0103;GTI=0;LEN=1;MEANALT=4;MQM=41.9577;MQMR=42;NS=1;NUMALT=1;ODDS=150.404;PAIRED=0.978873;PAIREDR=1;PAO=1;PQA=30.3333;PQR=30.3333;PRO=1;QA=4816;QR=225;RO=6;RPL=126;RPP=188.044;RPPR=8.80089;RPR=16;RUN=1;SAF=52;SAP=25.092;SAR=90;SF=0,3,6,10,12,16,20,21,24,25,27;SRF=2;SRP=4.45795;SRR=4;TYPE=ins	GT:GL:DP:RO:AO:QA:QR:AD	1/1:-400.114,-27.6943,0:160:6:142:4816:225:6,142	.	.	0/1:-200.71,0,-215.641:170:83:82:2884:3048:83,82	.	.	0/1:-133.205,0,-127.282:111:50:56:1905:1856:50,56	.	.	.	1/1:-456.499,-45.4815,0:164:2:154:5288:76:2,154	.	1/1:-542.397,-53.4361,0:202:1:183:6269:36:1,183	.	.	.	1/1:-472.062,-14.5111,0:183:12:161:5886:445:12,161	.	.	.	0/1:-217.342,0,-247.939:194:96:88:3169:3566:96,88	0/1:-17.4936,0,-207.728:93:75:17:514:2697:75,17	.	.	0/1:-107.821,0,-185.478:122:69:51:1662:2562:69,51	0/1:-225.447,0,-239.753:196:94:94:3253:3429:94,94	.	1/1:-571.682,-51.9744,0:217:5:202:6747:188:5,202	.	.	.	.	.	.	.	.	.
+chr6	152673147	.	G	A	3114.42	.	AB=0;ABP=0;AC=16;AF=1;AN=22;AO=120;CIGAR=1X;DP=1761;DPB=120;DPRA=0;EPP=4.81986;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=41.8417;MQMR=0;NS=1;NUMALT=1;ODDS=170.96;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=4446;QR=0;RO=0;RPL=41;RPP=29.1404;RPPR=0;RPR=79;RUN=1;SAF=106;SAP=156.171;SAR=14;SF=0,3,6,10,12,16,20,21,24,25,27;SRF=0;SRP=0;SRR=0;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	1/1:-383.528,-36.1236,0:120:0:120:4446:0:0,120	.	.	0/1:-148.483,0,-173.993:126:67:58:2166:2458:67,58	.	.	0/1:-195.836,0,-141.866:134:59:75:2755:2130:59,75	.	.	.	1/1:-451.647,-42.4452,0:141:0:141:5258:0:0,141	.	1/1:-668.382,-61.0978,0:210:1:208:7792:20:1,208	.	.	.	1/1:-423.745,-39.736,0:132:0:132:4921:0:0,132	.	.	.	0/1:-240.744,0,-237.982:184:91:92:3432:3390:91,92	0/1:-46.279,0,-261.238:118:92:26:938:3423:92,26	.	.	0/1:-125.404,0,-84.0975:79:33:46:1721:1242:33,46	0/1:-300.781,0,-449.794:294:168:125:4504:6219:168,125	.	1/1:-700.537,-67.1297,0:223:0:223:8113:0:0,223	.	.	.	.	.	.	.	.	.
+chr6	152675854	.	A	G	7133.03	.	AB=0;ABP=0;AC=16;AF=1;AN=22;AO=341;CIGAR=1X;DP=4012;DPB=341;DPRA=0;EPP=6.99027;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=41.9413;MQMR=0;NS=1;NUMALT=1;ODDS=477.332;PAIRED=0.994135;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=12319;QR=0;RO=0;RPL=80;RPP=211.631;RPPR=0;RPR=261;RUN=1;SAF=239;SAP=122.53;SAR=102;SF=0,3,6,10,12,16,20,21,24,25,27;SRF=0;SRP=0;SRR=0;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	1/1:-1070.42,-102.651,0:341:0:341:12319:0:0,341	.	.	0/1:-383.892,0,-441.19:328:172:155:5640:6233:172,155	.	.	0/1:-286.967,0,-469.051:298:174:121:4314:6439:174,121	.	.	.	1/1:-957.754,-91.2121,0:303:0:303:11023:0:0,303	.	1/1:-1456.27,-138.775,0:462:0:461:16769:0:0,461	.	.	.	1/1:-1145.57,-107.167,0:356:0:356:13215:0:0,356	.	.	.	0/1:-581.063,0,-509.784:430:200:228:8172:7404:200,228	0/1:-86.1504,0,-509.376:246:192:54:1834:6709:192,54	.	.	0/1:-226.309,0,-247.267:187:95:92:3245:3505:95,92	0/1:-577.827,0,-886.265:582:334:246:8674:12256:334,246	.	1/1:-1440.75,-135.843,0:479:3:476:16672:93:3,476	.	.	.	.	.	.	.	.	.
+chr6	152679594	.	A	G	2786.02	.	AB=0.509091;ABP=3.16823;AC=1;AF=0.5;AN=2;AO=112;CIGAR=1X;DP=220;DPB=220;DPRA=0;EPP=3.32051;EPPR=5.46589;GTI=0;LEN=1;MEANALT=2;MQM=41.8214;MQMR=41.9626;NS=1;NUMALT=1;ODDS=625.972;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=4057;QR=3980;RO=107;RPL=56;RPP=3.0103;RPPR=6.44001;RPR=56;RUN=1;SAF=48;SAP=7.97367;SAR=64;SF=20;SRF=48;SRP=5.46589;SRR=59;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-285.79,0,-279.319:220:107:112:4057:3980:107,112	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr6	152683413	.	G	T	6413.35	.	AB=0;ABP=0;AC=20;AF=1;AN=24;AO=213;CIGAR=1X;DP=2873;DPB=213;DPRA=0;EPP=10.4422;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=41.9812;MQMR=0;NS=1;NUMALT=1;ODDS=299.886;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=7863;QR=0;RO=0;RPL=73;RPP=48.7743;RPPR=0;RPR=140;RUN=1;SAF=111;SAP=3.83607;SAR=102;SF=0,3,6,9,10,12,16,20,21,24,25,27;SRF=0;SRP=0;SRR=0;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	1/1:-680.399,-64.1194,0:213:0:213:7863:0:0,213	.	.	1/1:-757.217,-69.6829,0:236:1:235:8789:14:1,235	.	.	1/1:-575.495,-53.8844,0:179:0:179:6661:0:0,179	.	.	0/1:-188.053,0,-244.695:165:91:74:2768:3396:91,74	1/1:-734.679,-66.069,0:229:1:228:8540:29:1,228	.	1/1:-1122.01,-104.457,0:347:0:347:13008:0:0,347	.	.	.	1/1:-803.824,-75.2575,0:250:0:250:9303:0:0,250	.	.	.	0/1:-307.567,0,-454.888:290:168:122:4583:6268:168,122	0/1:-288.778,0,-60.8012:141:34:107:3823:1196:34,107	.	.	0/1:-127.193,0,-167.758:116:63:51:1862:2342:63,51	1/1:-1199.51,-104.16,0:388:5:383:14024:142:5,383	.	1/1:-1003.64,-96.0286,0:319:0:319:11660:0:0,319	.	.	.	.	.	.	.	.	.
+chr6	152686071	.	A	G	4356.47	.	AB=0.536508;ABP=6.65699;AC=2;AF=0.5;AN=4;AO=169;CIGAR=1X;DP=642;DPB=315;DPRA=0;EPP=15.3581;EPPR=13.0645;GTI=0;LEN=1;MEANALT=1;MQM=41.6095;MQMR=41.8288;NS=1;NUMALT=1;ODDS=819.917;PAIRED=1;PAIREDR=0.993151;PAO=0;PQA=0;PQR=0;PRO=0;QA=6320;QR=5322;RO=146;RPL=76;RPP=6.72365;RPPR=10.2089;RPR=93;RUN=1;SAF=96;SAP=9.80739;SAR=73;SF=12,27;SRF=78;SRP=4.49761;SRR=68;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-450.452,0,-365.209:315:146:169:6320:5322:146,169	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-442.241,0,-375.129:327:148:178:6316:5468:148,178	.	.	.	.	.	.	.	.	.
+chr6	152686090	.	G	T	4205.46	.	AB=0.512903;ABP=3.4586;AC=2;AF=0.5;AN=4;AO=159;CIGAR=1X;DP=628;DPB=310;DPRA=0;EPP=9.03306;EPPR=22.6974;GTI=0;LEN=1;MEANALT=1;MQM=41.5849;MQMR=41.9603;NS=1;NUMALT=1;ODDS=872.652;PAIRED=1;PAIREDR=0.986755;PAO=0;PQA=0;PQR=0;PRO=0;QA=5948;QR=5556;RO=151;RPL=73;RPP=5.31834;RPPR=8.2017;RPR=86;RUN=1;SAF=87;SAP=6.08314;SAR=72;SF=12,27;SRF=84;SRP=7.1663;SRR=67;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-419.853,0,-388.848:310:151:159:5948:5556:151,159	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-439.493,0,-385.249:318:150:168:6247:5543:150,168	.	.	.	.	.	.	.	.	.
+chr6	152694184	.	T	C	6024.00	.	AB=0.494737;ABP=3.07887;AC=15;AF=0.5;AN=22;AO=141;CIGAR=1X;DP=3303;DPB=285;DPRA=0;EPP=5.61299;EPPR=10.3089;GTI=0;LEN=1;MEANALT=1;MQM=41.3688;MQMR=41.6181;NS=1;NUMALT=1;ODDS=776.12;PAIRED=0.985816;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=5239;QR=5433;RO=144;RPL=16;RPP=185.984;RPPR=99.5202;RPR=125;RUN=1;SAF=74;SAP=3.76493;SAR=67;SF=0,3,6,10,12,16,20,21,24,25,27;SRF=79;SRP=5.96592;SRR=65;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	0/1:-364.84,0,-380.027:285:144:141:5239:5433:144,141	.	.	0/1:-418.803,0,-325.581:285:126:158:5850:4776:126,158	.	.	0/1:-376.671,0,-277.664:249:109:140:5223:4078:109,140	.	.	.	1/1:-809.535,-74.9565,0:249:0:249:9399:0:0,249	.	1/1:-1178.43,-111.08,0:369:0:369:13766:0:0,369	.	.	.	1/1:-842.572,-77.6657,0:264:0:258:9790:0:0,258	.	.	.	0/1:-522.961,0,-374.106:342:150:192:7274:5563:150,192	0/1:-141.602,0,-413.566:218:150:67:2399:5552:150,67	.	.	0/1:-188.806,0,-153.77:130:60:70:2634:2225:60,70	0/1:-613.779,0,-538.89:442:207:233:8633:7775:207,233	.	1/1:-1495.92,-139.847,0:470:1:468:17413:16:1,468	.	.	.	.	.	.	.	.	.
+chr6	152694190	.	T	C	1777.11	.	AB=0.533835;ABP=4.33278;AC=1;AF=0.5;AN=2;AO=71;CIGAR=1X;DP=133;DPB=133;DPRA=0;EPP=6.71098;EPPR=11.9764;GTI=0;LEN=1;MEANALT=1;MQM=41.9437;MQMR=42;NS=1;NUMALT=1;ODDS=348.594;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2670;QR=2346;RO=62;RPL=12;RPP=70.5706;RPPR=53.5846;RPR=59;RUN=1;SAF=38;SAP=3.7749;SAR=33;SF=24;SRF=31;SRP=3.0103;SRR=31;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-190.807,0,-162.944:133:62:71:2670:2346:62,71	.	.	.	.	.	.	.	.	.	.	.	.
+chr6	152697706	.	C	T	1647.77	.	AB=0.493976;ABP=3.03646;AC=11;AF=0.5;AN=18;AO=41;CIGAR=1X;DP=868;DPB=83;DPRA=0;EPP=11.961;EPPR=22.1298;GTI=0;LEN=1;MEANALT=2;MQM=42;MQMR=41.9512;NS=1;NUMALT=1;ODDS=206.24;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1580;QR=1407;RO=41;RPL=27;RPP=11.961;RPPR=3.06326;RPR=14;RUN=1;SAF=17;SAP=5.60547;SAR=24;SF=0,3,5,6,9,20,21,24,25;SRF=16;SRP=7.30028;SRR=25;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	0/1:-111.464,0,-97.7091:83:41:41:1580:1407:41,41	.	.	0/1:-161.002,0,-125.077:110:50:60:2248:1818:50,60	.	1/1:-310.987,-28.7012,0:98:1:97:3605:39:1,97	0/1:-124.036,0,-69.4469:75:30:45:1692:1055:30,45	.	.	1/1:-265.387,-24.6845,0:82:0:82:3070:0:0,82	.	.	.	.	.	.	.	.	.	.	0/1:-144.358,0,-94.1692:92:39:53:1991:1402:39,53	0/1:-144.861,0,-52.3015:79:26:53:1945:868:26,53	.	.	0/1:-76.8139,0,-87.971:64:34:30:1104:1228:34,30	0/1:-227.186,0,-237.66:185:95:90:3270:3371:95,90	.	.	.	.	.	.	.	.	.	.	.
+chr6	152708310	.	G	A	3634.09	.	AB=0.456019;ABP=10.2686;AC=4;AF=0.5;AN=8;AO=197;CIGAR=1X;DP=1426;DPB=432;DPRA=0;EPP=7.87131;EPPR=3.09346;GTI=0;LEN=1;MEANALT=1;MQM=41.5584;MQMR=41.9915;NS=1;NUMALT=1;ODDS=1144.4;PAIRED=0.989848;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=7420;QR=8851;RO=235;RPL=102;RPP=3.55041;RPPR=35.1758;RPR=95;RUN=1;SAF=112;SAP=11.0459;SAR=85;SF=0,6,9,21;SRF=144;SRP=28.9663;SRR=91;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	0/1:-506.227,0,-636.984:432:235:197:7420:8851:235,197	.	.	.	.	.	0/1:-479.754,0,-524.297:387:201:184:6900:7386:201,184	.	.	0/1:-423.732,0,-480.517:344:182:162:6101:6776:182,162	.	.	.	.	.	.	.	.	.	.	.	0/1:-98.2106,0,-574.749:263:207:55:2048:7530:207,55	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr6	152712715	.	GAAAAAAAAAAAAAAGAAAAAAAATTAATTCT	GAAAAAAAAAAAAAGAAAAAAAATTAATTCT,AAAAAAAAAAAAAAAAAAAAAAGAAAAAAAATTAATTCT,GAAAAAAAAAAAAAAAAAAAAGAAAAAAAATTAATTCT	166.91	.	AB=0.105263,0.368421;ABP=28.7251,5.8675;AC=2,1,1;AF=0.5,0.5;AN=6;AO=2,7;CIGAR=1X7I31M,1M6I31M;DP=140;DPB=22.6562;DPRA=0,0;EPP=3.0103,5.80219;EPPR=0;GTI=0;LEN=39,6;MEANALT=9,9;MQM=31.5,38.8571;MQMR=0;NS=1;NUMALT=2;ODDS=15.6224;PAIRED=1,1;PAIREDR=0;PAO=6,0;PQA=221,0;PQR=0;PRO=0;QA=57,209;QR=0;RO=0;RPL=1,2;RPP=3.0103,5.80219;RPPR=0;RPR=1,5;RUN=1,1;SAF=0,0;SAP=7.35324,18.2106;SAR=2,7;SF=9,24,27;SRF=0;SRP=0;SRR=0;TYPE=complex,ins	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	2/3:-37.6075,.,.,-16.0231,.,-13.6149,-21.5905,.,0,-19.4833:19:0:.,2,7:.,57,209:0:0,2,7	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-7.11502,0,-38.4409,.,.,.,.,.,.,.:22:14:4,.,.:143,.,.:515:14,4	.	.	0/1:-34.7015,0,-185.658,.,.,.,.,.,.,.:99:67:23,.,.:731,.,.:2477:67,23	.	.	.	.	.	.	.	.	.
+chr6	152746593	.	A	T	1352.09	.	AB=0.448819;ABP=5.8999;AC=1;AF=0.5;AN=2;AO=57;CIGAR=1X;DP=127;DPB=127;DPRA=0;EPP=3.0484;EPPR=7.47733;GTI=0;LEN=1;MEANALT=1;MQM=41.3684;MQMR=41.7429;NS=1;NUMALT=1;ODDS=311.331;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2113;QR=2623;RO=70;RPL=22;RPP=9.44853;RPPR=20.8784;RPR=35;RUN=1;SAF=26;SAP=3.9627;SAR=31;SF=0;SRF=34;SRP=3.13438;SRR=36;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	0/1:-142.316,0,-187.749:127:70:57:2113:2623:70,57	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr6	152751218	.	ATAGTAGA	ATAGA	274.96	.	AB=0.44;ABP=3.79203;AC=7;AF=0.5;AN=14;AO=11;CIGAR=1M3D4M;DP=197;DPB=21.125;DPRA=0;EPP=12.6832;EPPR=18.5208;GTI=0;LEN=3;MEANALT=1;MQM=41.8182;MQMR=42;NS=1;NUMALT=1;ODDS=47.0446;PAIRED=1;PAIREDR=1;PAO=1;PQA=37;PQR=37;PRO=1;QA=402;QR=522;RO=14;RPL=4;RPP=4.78696;RPPR=3.63072;RPR=7;RUN=1;SAF=6;SAP=3.20771;SAR=5;SF=5,9,10,16,20,21,25;SRF=10;SRP=8.59409;SRR=4;TYPE=del	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	0/1:-26.3184,0,-36.9298:25:14:11:402:522:14,11	.	.	.	0/1:-11.34,0,-26.2783:16:10:6:181:351:10,6	0/1:-44.6206,0,-18.8389:29:9:19:626:333:9,19	.	.	.	.	.	0/1:-32.2938,0,-5.46965:14:3:11:418:107:3,11	.	.	.	0/1:-39.1561,0,-74.9817:44:27:17:600:1014:27,17	0/1:-30.1884,0,-22.6934:22:9:13:417:333:9,13	.	.	.	0/1:-58.0914,0,-48.0338:47:20:27:857:740:20,27	.	.	.	.	.	.	.	.	.	.	.
+chr6	152765726	.	GAAAAAAAAAAACACGT	GAAAAAAAAAACACGT	376.30	.	AB=0.58;ABP=5.78978;AC=2;AF=0.5;AN=4;AO=29;CIGAR=1M1D15M;DP=94;DPB=48.0588;DPRA=0;EPP=24.6501;EPPR=10.1038;GTI=0;LEN=1;MEANALT=4;MQM=42;MQMR=40.8;NS=1;NUMALT=1;ODDS=58.7824;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1034;QR=536;RO=15;RPL=15;RPP=3.08518;RPPR=3.15506;RPR=14;RUN=1;SAF=9;SAP=12.0706;SAR=20;SF=0,21;SRF=4;SRP=10.1038;SRR=11;TYPE=del	GT:GL:DP:RO:AO:QA:QR:AD	0/1:-76.7487,0,-32.8802:50:15:29:1034:536:15,29	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-15.5986,0,-77.0622:44:29:9:311:1011:29,9	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr6	152771849	.	G	A	4698.22	.	AB=0.457213;ABP=9.5141;AC=1;AF=0.5;AN=2;AO=187;CIGAR=1X;DP=409;DPB=409;DPRA=0;EPP=5.62303;EPPR=6.92286;GTI=0;LEN=1;MEANALT=1;MQM=41.9786;MQMR=42;NS=1;NUMALT=1;ODDS=1081.81;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=7023;QR=8270;RO=222;RPL=127;RPP=55.1372;RPPR=43.0749;RPR=60;RUN=1;SAF=101;SAP=5.62303;SAR=86;SF=0;SRF=118;SRP=4.92746;SRR=104;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	0/1:-483.401,0,-593.681:409:222:187:7023:8270:222,187	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr6	152772264	.	A	G	4052.95	.	AB=0;ABP=0;AC=10;AF=1;AN=18;AO=238;CIGAR=1X;DP=2476;DPB=238;DPRA=0;EPP=3.0103;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=41.5294;MQMR=0;NS=1;NUMALT=1;ODDS=334.543;PAIRED=0.978992;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=8733;QR=0;RO=0;RPL=140;RPP=19.1047;RPPR=0;RPR=98;RUN=1;SAF=135;SAP=12.3531;SAR=103;SF=0,5,6,9,10,16,20,21,25;SRF=0;SRP=0;SRR=0;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	1/1:-749.627,-71.6451,0:238:0:238:8733:0:0,238	.	.	.	.	0/1:-447.149,0,-429.913:344:168:176:6392:6211:168,176	0/1:-353.054,0,-242.81:236:100:135:4956:3654:100,135	.	.	0/1:-278.89,0,-216.91:192:86:106:3925:3163:86,106	0/1:-319.571,0,-313.582:244:123:121:4569:4490:123,121	.	.	.	.	.	0/1:-393.057,0,-386.069:293:146:147:5583:5488:146,147	.	.	.	0/1:-397.934,0,-436.535:322:167:154:5811:6213:167,154	0/1:-299.681,0,-88.0547:161:44:115:3999:1563:44,115	.	.	.	0/1:-503.647,0,-615.059:446:238:208:7518:8759:238,208	.	.	.	.	.	.	.	.	.	.	.
+chr6	152777095	.	A	C	2238.85	.	AB=0.473404;ABP=4.16534;AC=1;AF=0.5;AN=2;AO=89;CIGAR=1X;DP=188;DPB=188;DPRA=0;EPP=7.13366;EPPR=9.34924;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=42;NS=1;NUMALT=1;ODDS=515.515;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3318;QR=3713;RO=99;RPL=37;RPP=8.49998;RPPR=4.08507;RPR=52;RUN=1;SAF=43;SAP=3.22989;SAR=46;SF=0;SRF=51;SRP=3.20771;SRR=48;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	0/1:-231.434,0,-264.762:188:99:89:3318:3713:99,89	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr6	152784602	.	G	A	1864.84	.	AB=0.443182;ABP=7.94546;AC=1;AF=0.5;AN=2;AO=78;CIGAR=1X;DP=176;DPB=176;DPRA=0;EPP=4.01252;EPPR=3.10078;GTI=0;LEN=1;MEANALT=3;MQM=41.7051;MQMR=41.7604;NS=1;NUMALT=1;ODDS=429.395;PAIRED=1;PAIREDR=0.989583;PAO=0;PQA=0;PQR=0;PRO=0;QA=2898;QR=3595;RO=96;RPL=56;RPP=35.1926;RPPR=26.1727;RPR=22;RUN=1;SAF=32;SAP=8.46682;SAR=46;SF=16;SRF=43;SRP=5.27225;SRR=53;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-197.166,0,-258.179:176:96:78:2898:3595:96,78	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr6	152793412	.	C	A	1942.50	.	AB=0;ABP=0;AC=16;AF=1;AN=22;AO=112;CIGAR=1X;DP=1078;DPB=112;DPRA=0;EPP=87.4651;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=41.8125;MQMR=0;NS=1;NUMALT=1;ODDS=159.87;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=4238;QR=0;RO=0;RPL=69;RPP=16.1167;RPPR=0;RPR=43;RUN=1;SAF=68;SAP=14.1779;SAR=44;SF=0,3,5,6,9,10,16,20,21,24,25;SRF=0;SRP=0;SRR=0;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	1/1:-365.895,-33.7154,0:112:0:112:4238:0:0,112	.	.	1/1:-254.95,-24.0824,0:81:0:80:2948:0:0,80	.	0/1:-128.121,0,-139.266:104:53:51:1866:1967:53,51	0/1:-150.155,0,-106.224:99:44:55:2081:1582:44,55	.	.	0/1:-67.9197,0,-83.4187:56:30:26:977:1160:30,26	0/1:-142.477,0,-114.13:105:47:56:2022:1705:47,56	.	.	.	.	.	0/1:-124.117,0,-105.824:85:40:45:1735:1520:40,45	.	.	.	1/1:-359.459,-32.8123,0:109:0:109:4165:0:0,109	1/1:-291.573,-27.0927,0:90:0:90:3369:0:0,90	.	.	1/1:-202.981,-18.5707,0:67:1:66:2361:16:1,66	0/1:-165.681,0,-276.442:170:102:68:2569:3786:102,68	.	.	.	.	.	.	.	.	.	.	.
+chr6	152793572	.	TAAA	AAAG,TAAG	2160.64	.	AB=0.442857,0.55;ABP=6.98099,6.05036;AC=9,1;AF=0.5,0.5;AN=18;AO=62,77;CIGAR=1X2M1X,3M1X;DP=1386;DPB=141.25;DPRA=0,0;EPP=4.27115,15.4469;EPPR=0;GTI=0;LEN=4,1;MEANALT=3,3;MQM=41.3387,41.7532;MQMR=0;NS=1;NUMALT=2;ODDS=325.782;PAIRED=0.983871,1;PAIREDR=0;PAO=2.5,0.5;PQA=49.5,19.5;PQR=39;PRO=1;QA=2262,2886;QR=0;RO=0;RPL=45,60;RPP=30.4689,55.1538;RPPR=0;RPR=17,17;RUN=1,1;SAF=19,34;SAP=23.184,5.29458;SAR=43,43;SF=0,5,6,9,10,16,20,21,25;SRF=0;SRP=0;SRR=0;TYPE=complex,snp	GT:GL:DP:RO:AO:QA:QR:AD	1/2:-397.465,-221.842,-205.025,-173.683,0,-152.953:140:0:62,77:2262,2886:0:0,62,77	.	.	.	.	0/1:-126.956,0,-258.786,.,.,.:148:94:49,.:1796,.:3526:94,49	0/1:-141.114,0,-102.558,.,.,.:97:41:55,.:1955,.:1511:41,55	.	.	0/1:-158.548,0,-135.721,.,.,.:120:53:64,.:2221,.:1970:53,64	0/1:-186.377,0,-152.752,.,.,.:133:59:71,.:2600,.:2228:59,71	.	.	.	.	.	0/1:-215.895,0,-170.2,.,.,.:147:66:80,.:2932,.:2489:66,80	.	.	.	0/1:-280.35,0,-191.427,.,.,.:190:79:106,.:3834,.:2853:79,106	0/1:-162.272,0,-71.3693,.,.,.:96:32:61,.:2154,.:1144:32,61	.	.	.	0/1:-416.179,0,-399.231,.,.,.:315:152:160,.:5736,.:5640:152,160	.	.	.	.	.	.	.	.	.	.	.
+chr6	152809527	.	A	T	1251.89	.	AB=0;ABP=0;AC=10;AF=1;AN=18;AO=86;CIGAR=1X;DP=770;DPB=86;DPRA=0;EPP=3.91929;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=41.9767;MQMR=0;NS=1;NUMALT=1;ODDS=123.826;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=3206;QR=0;RO=0;RPL=34;RPP=11.1912;RPPR=0;RPR=52;RUN=1;SAF=50;SAP=7.95924;SAR=36;SF=0,5,6,9,10,16,20,21,25;SRF=0;SRP=0;SRR=0;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	1/1:-277.579,-25.8886,0:86:0:86:3206:0:0,86	.	.	.	.	0/1:-88.2694,0,-116.725:78:44:34:1289:1617:44,34	0/1:-82.682,0,-131.602:81:48:33:1234:1800:48,33	.	.	0/1:-113.246,0,-83.7793:78:35:43:1575:1231:35,43	0/1:-106.19,0,-81.4145:70:31:39:1465:1182:31,39	.	.	.	.	.	0/1:-89.507,0,-100.498:72:38:34:1280:1410:38,34	.	.	.	0/1:-118.385,0,-127.812:93:49:44:1695:1796:49,44	0/1:-150.043,0,-57.0262:80:26:54:2006:929:26,54	.	.	.	0/1:-162.178,0,-183.35:132:70:62:2341:2571:70,62	.	.	.	.	.	.	.	.	.	.	.
+chr6	152847284	.	A	G	1278.96	.	AB=0.427481;ABP=8.99428;AC=1;AF=0.5;AN=2;AO=56;CIGAR=1X;DP=131;DPB=131;DPRA=0;EPP=3.16541;EPPR=3.27088;GTI=0;LEN=1;MEANALT=1;MQM=41.9643;MQMR=42;NS=1;NUMALT=1;ODDS=294.492;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2006;QR=2743;RO=75;RPL=21;RPP=10.6105;RPPR=18.3264;RPR=35;RUN=1;SAF=28;SAP=3.0103;SAR=28;SF=20;SRF=40;SRP=3.73412;SRR=35;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-135.342,0,-199.495:131:75:56:2006:2743:75,56	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr6	152847335	.	G	A	956.12	.	AB=0.634921;ABP=12.9715;AC=7;AF=0.5;AN=14;AO=40;CIGAR=1X;DP=522;DPB=63;DPRA=0;EPP=16.9077;EPPR=10.6577;GTI=0;LEN=1;MEANALT=1;MQM=41.55;MQMR=41.1739;NS=1;NUMALT=1;ODDS=102.87;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1495;QR=827;RO=23;RPL=26;RPP=10.8276;RPPR=10.6577;RPR=14;RUN=1;SAF=18;SAP=3.87889;SAR=22;SF=3,9,10,16,21,24,25;SRF=13;SRP=3.86001;SRR=10;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	0/1:-110.363,0,-52.6014:63:23:40:1495:827:23,40	.	.	.	.	.	0/1:-82.3375,0,-77.0179:61:30:31:1159:1097:30,31	0/1:-110.582,0,-29.2819:54:15:39:1464:522:15,39	.	.	.	.	.	0/1:-116.025,0,-125.413:91:47:44:1657:1797:47,44	.	.	.	.	0/1:-55.7627,0,-110.12:66:42:24:869:1494:42,24	.	.	0/1:-48.4566,0,-75.3281:47:27:20:717:1033:27,20	0/1:-207.337,0,-164.854:140:64:76:2892:2400:64,76	.	.	.	.	.	.	.	.	.	.	.
+chr7	81579832	.	TAAAAAAAAAAGAAAAGAACAGAAAAAGAAAAATC	TAAAAAAAAAAAGAAAAGAACAGAAAAAGAAAAATC	204.75	.	AB=0.458333;ABP=3.37221;AC=1;AF=0.5;AN=2;AO=11;CIGAR=1M1I34M;DP=24;DPB=24.6286;DPRA=0;EPP=7.94546;EPPR=3.0103;GTI=0;LEN=1;MEANALT=2;MQM=42;MQMR=42;NS=1;NUMALT=1;ODDS=47.1448;PAIRED=1;PAIREDR=1;PAO=2;PQA=64.5;PQR=64.5;PRO=2;QA=406;QR=422;RO=12;RPL=6;RPP=3.20771;RPPR=14.5915;RPR=5;RUN=1;SAF=3;SAP=7.94546;SAR=8;SF=16;SRF=4;SRP=5.9056;SRR=8;TYPE=ins	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-26.1018,0,-27.6835:24:12:11:406:422:12,11	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr7	81588636	.	G	A	4277.57	.	AB=0;ABP=0;AC=5;AF=1;AN=6;AO=194;CIGAR=1X;DP=500;DPB=194;DPRA=0;EPP=15.9496;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=0;NS=1;NUMALT=1;ODDS=273.546;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=7355;QR=0;RO=0;RPL=73;RPP=28.7993;RPPR=0;RPR=121;RUN=1;SAF=109;SAP=9.45756;SAR=85;SF=12,20,21;SRF=0;SRP=0;SRR=0;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	.	.	1/1:-635.553,-58.3998,0:194:0:194:7355:0:0,194	.	.	.	.	.	.	.	1/1:-606.621,-56.2926,0:187:0:187:7051:0:0,187	0/1:-71.0241,0,-236.9:119:86:33:1229:3134:86,33	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr7	81591716	.	T	G	1729.07	.	AB=0;ABP=0;AC=5;AF=1;AN=6;AO=88;CIGAR=1X;DP=205;DPB=89;DPRA=0;EPP=3.109;EPPR=5.18177;GTI=0;LEN=1;MEANALT=1;MQM=41.9773;MQMR=42;NS=1;NUMALT=1;ODDS=121.435;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3280;QR=18;RO=1;RPL=40;RPP=4.58955;RPPR=5.18177;RPR=48;RUN=1;SAF=31;SAP=19.6912;SAR=57;SF=12,20,21;SRF=0;SRP=5.18177;SRR=1;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	.	.	1/1:-281.588,-24.9934,0:89:1:88:3280:18:1,88	.	.	.	.	.	.	.	1/1:-216.607,-20.169,0:67:0:67:2531:0:0,67	0/1:-35.1251,0,-94.3221:49:33:16:572:1277:33,16	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr7	81593454	.	G	A	1104.55	.	AB=0.556452;ABP=6.44263;AC=8;AF=0.5;AN=16;AO=69;CIGAR=1X;DP=801;DPB=124;DPRA=0;EPP=3.29354;EPPR=4.94488;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=42;NS=1;NUMALT=1;ODDS=297.618;PAIRED=0.985507;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2603;QR=2059;RO=55;RPL=42;RPP=10.0912;RPPR=23.8959;RPR=27;RUN=1;SAF=24;SAP=16.8888;SAR=45;SF=0,3,5,6,9,21,24,27;SRF=14;SRP=31.7922;SRR=41;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	0/1:-187.728,0,-140.902:124:55:69:2603:2059:55,69	.	.	0/1:-137.353,0,-116.876:96:44:52:1915:1686:44,52	.	0/1:-100.767,0,-156.459:98:57:41:1513:2148:57,41	0/1:-83.8439,0,-99.0782:70:38:32:1213:1385:38,32	.	.	0/1:-92.964,0,-119.836:80:44:36:1350:1662:44,36	.	.	.	.	.	.	.	.	.	.	.	0/1:-18.616,0,-157.731:67:55:12:445:2052:55,12	.	.	0/1:-73.4816,0,-97.5047:64:36:28:1070:1346:36,28	.	.	0/1:-259.957,0,-268.366:202:103:99:3714:3800:103,99	.	.	.	.	.	.	.	.	.
+chr7	81603870	.	TGAAAAAAAAACATTT	TGAAAAAAAAAAACATTT	104.84	.	AB=0.388889;ABP=4.9405;AC=1;AF=0.5;AN=2;AO=7;CIGAR=2M2I14M;DP=18;DPB=18.875;DPRA=0;EPP=5.80219;EPPR=22.5536;GTI=0;LEN=2;MEANALT=2;MQM=41.7143;MQMR=42;NS=1;NUMALT=1;ODDS=24.1401;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=229;QR=327;RO=9;RPL=5;RPP=5.80219;RPPR=3.25157;RPR=2;RUN=1;SAF=3;SAP=3.32051;SAR=4;SF=9;SRF=5;SRP=3.25157;SRR=4;TYPE=ins	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	0/1:-15.3751,0,-23.73:18:9:7:229:327:9,7	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr7	81603871	.	GAAAAAAAAACATTT	GAAAAAAAAAAACATTT	239.70	.	AB=0.352941;ABP=6.20364;AC=2;AF=0.5;AN=4;AO=6;CIGAR=1M2I14M;DP=59;DPB=18.1333;DPRA=0;EPP=4.45795;EPPR=14.8328;GTI=0;LEN=2;MEANALT=3;MQM=41.6667;MQMR=42;NS=1;NUMALT=1;ODDS=20.3069;PAIRED=1;PAIREDR=1;PAO=1;PQA=38;PQR=0;PRO=0;QA=175;QR=320;RO=9;RPL=3;RPP=3.0103;RPPR=3.25157;RPR=3;RUN=1;SAF=1;SAP=8.80089;SAR=5;SF=5,27;SRF=4;SRP=3.25157;SRR=5;TYPE=ins	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	0/1:-13.7985,0,-23.1953:17:9:6:175:320:9,6	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-45.6313,0,-35.0455:42:15:23:666:547:15,23	.	.	.	.	.	.	.	.	.
+chr7	81620630	.	C	T	1203.59	.	AB=0.485437;ABP=3.20004;AC=1;AF=0.5;AN=2;AO=50;CIGAR=1X;DP=103;DPB=103;DPRA=0;EPP=14.1282;EPPR=7.96781;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=42;NS=1;NUMALT=1;ODDS=270.701;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1905;QR=1924;RO=53;RPL=43;RPP=59.2949;RPPR=101.382;RPR=7;RUN=1;SAF=26;SAP=3.18402;SAR=24;SF=0;SRF=30;SRP=5.01789;SRR=23;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	0/1:-133.56,0,-136.116:103:53:50:1905:1924:53,50	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr7	81634822	.	GAAAAAAAAAAAAAAGCTT	GAAAAAAAAAAAAAGCTT	209.32	.	AB=0.141414;ABP=113.58;AC=6;AF=0.5;AN=12;AO=14;CIGAR=1M1D17M;DP=542;DPB=97.9474;DPRA=0;EPP=8.59409;EPPR=4.31318;GTI=0;LEN=1;MEANALT=14;MQM=42;MQMR=40.9833;NS=1;NUMALT=1;ODDS=15.219;PAIRED=1;PAIREDR=0.95;PAO=0;PQA=0;PQR=0;PRO=0;QA=470;QR=2061;RO=60;RPL=8;RPP=3.63072;RPPR=3.58936;RPR=6;RUN=1;SAF=6;SAP=3.63072;SAR=8;SF=3,9,10,16,20,21;SRF=25;SRP=6.62942;SRR=35;TYPE=del	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	0/1:-18.9145,0,-156.01:99:60:14:470:2061:60,14	.	.	.	.	.	0/1:-18.5556,0,-69.8738:57:26:10:337:920:26,10	0/1:-13.7164,0,-143.061:108:53:13:382:1867:53,13	.	.	.	.	.	0/1:-16.6876,0,-121.224:80:45:13:388:1593:45,13	.	.	.	0/1:-94.3476,0,-105.373:128:43:45:1379:1504:43,45	0/1:-17.2061,0,-81.1745:70:32:13:348:1106:32,13	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr7	81641570	.	GAAAAAAAAAAAAAGTCG	GAAAAAAAAAAAAGTCG,GAAAAAAAAAAAAAAAAGTCG,GAAAAAAAAAAAAAAAAAGTCG	196.30	.	AB=0.142857;ABP=111.584;AC=4,3,5;AF=0.5;AN=16;AO=14;CIGAR=1M1D16M;DP=844;DPB=96.4444;DPRA=0;EPP=5.49198;EPPR=30.7823;GTI=0;LEN=1;MEANALT=18;MQM=42;MQMR=41.2456;NS=1;NUMALT=1;ODDS=20.0122;PAIRED=1;PAIREDR=0.964912;PAO=0.333333;PQA=4.66667;PQR=4.66667;PRO=0.333333;QA=493;QR=1959;RO=57;RPL=9;RPP=5.49198;RPPR=16.763;RPR=5;RUN=1;SAF=10;SAP=8.59409;SAR=4;SF=3,6,9,10,12,16,25,27;SRF=37;SRP=14.02;SRR=20;TYPE=del	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	0/1:-20.7227,0,-148.076,.,.,.,.,.,.,.:98:57:14,.,.:493,.,.:1959:57,14	.	.	2/3:-20.5091,.,.,-10.8195,.,-6.30403,-15.7503,.,0,-10.9338:60:0:.,9,10:.,223,170:0:0,9,10	.	.	3/3:-23.3751,.,.,.,.,.,-5.41854,.,.,0:51:0:.,.,14:.,.,280:0:0,14	2/3:-37.6585,.,.,-15.0169,.,-10.2004,-25.8211,.,0,-21.9077:69:0:.,12,9:.,346,212:0:0,12,9	.	0/1:-21.6744,0,-211.072,.,.,.,.,.,.,.:153:80:18,.,.:605,.,.:2778:80,18	.	.	.	0/1:-17.2783,0,-125.333,.,.,.,.,.,.,.:82:49:11,.,.:406,.,.:1699:49,11	.	.	.	.	.	.	.	.	2/3:-77.9664,.,.,-39.4771,.,-37.0327,-38.1167,.,0,-34.1672:168:3:.,22,27:.,609,660:102:3,22,27	.	0/1:-15.9371,0,-119.027,.,.,.,.,.,.,.:163:45:10,.,.:374,.,.:1541:45,10	.	.	.	.	.	.	.	.	.
+chr7	81667468	.	C	T	876.83	.	AB=0.417582;ABP=8.37933;AC=1;AF=0.5;AN=2;AO=38;CIGAR=1X;DP=91;DPB=91;DPRA=0;EPP=5.06748;EPPR=4.03458;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=41.6604;NS=1;NUMALT=1;ODDS=201.898;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1402;QR=1889;RO=53;RPL=19;RPP=3.0103;RPPR=6.32897;RPR=19;RUN=1;SAF=23;SAP=6.66752;SAR=15;SF=21;SRF=25;SRP=3.37904;SRR=28;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-94.5279,0,-136.433:91:53:38:1402:1889:53,38	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr7	81695842	.	TAAAAAAAAAAAAAAAAGAGAGATATT	TAAAAAAAAAAAAAAAAAGAGAGATATT,TAAAAAAAAAAAAAAAGAGAGATATT	86.41	.	AB=0.178571;ABP=28.1373;AC=2,5;AF=0.5;AN=14;AO=5;CIGAR=1M1D25M;DP=347;DPB=28.2222;DPRA=0;EPP=3.44459;EPPR=8.80089;GTI=0;LEN=1;MEANALT=12;MQM=38;MQMR=39;NS=1;NUMALT=1;ODDS=12.651;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=155;QR=221;RO=6;RPL=1;RPP=6.91895;RPPR=8.80089;RPR=4;RUN=1;SAF=1;SAP=6.91895;SAR=4;SF=9,12,16,20,21,25,27;SRF=0;SRP=16.0391;SRR=6;TYPE=del	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	0/2:-10.2585,.,.,0,.,-14.8816:28:6:.,5:.,155:221:6,5	.	.	0/2:-15.412,.,.,0,.,-34.0755:64:15:.,9:.,263:536:15,9	.	.	.	0/2:-12.2221,.,.,0,.,-11.8409:20:5:.,6:.,192:184:5,6	.	.	.	0/1:-13.0414,0,-29.6145,.,.,.:51:12:8,.:236,.:426:12,8	0/2:-8.67072,.,.,0,.,-31.601:22:12:.,5:.,157:418:12,5	.	.	.	0/2:-18.0282,.,.,0,.,-89.5211:98:37:.,12:.,376:1244:37,12	.	0/1:-23.586,0,-26.7438,.,.,.:64:11:12,.:360,.:399:11,12	.	.	.	.	.	.	.	.	.
+chr7	81765996	.	CAAAAAAAAAAGAACGC	CAAAAAAAAAAAGAACGC,CAAAAAAAAAAGAATGC	796.98	.	AB=0.429688;ABP=8.50684;AC=1,1;AF=0.5;AN=4;AO=55;CIGAR=14M1X2M;DP=224;DPB=128;DPRA=0;EPP=3.99733;EPPR=4.40625;GTI=0;LEN=1;MEANALT=7;MQM=42;MQMR=42;NS=1;NUMALT=1;ODDS=314.589;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2041;QR=2077;RO=56;RPL=26;RPP=3.36563;RPPR=18.5208;RPR=29;RUN=1;SAF=28;SAP=3.04978;SAR=27;SF=3,21;SRF=31;SRP=4.40625;SRR=25;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	0/2:-142.794,.,.,0,.,-147.14:128:56:.,55:.,2041:2077:56,55	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-32.0772,0,-155.372,.,.,.:96:57:22,.:635,.:2065:57,22	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr7	81799966	.	G	A	1632.62	.	AB=0.585586;ABP=10.0725;AC=1;AF=0.5;AN=2;AO=65;CIGAR=1X;DP=111;DPB=111;DPRA=0;EPP=23.8898;EPPR=7.73089;GTI=0;LEN=1;MEANALT=1;MQM=41.7231;MQMR=42;NS=1;NUMALT=1;ODDS=234.848;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2444;QR=1677;RO=46;RPL=51;RPP=48.7448;RPPR=34.9215;RPR=14;RUN=1;SAF=39;SAP=8.65613;SAR=26;SF=3;SRF=26;SRP=4.70971;SRR=20;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	0/1:-177.549,0,-112.551:111:46:65:2444:1677:46,65	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr7	81799990	.	T	C	1376.79	.	AB=0.651163;ABP=20.0791;AC=1;AF=0.5;AN=2;AO=56;CIGAR=1X;DP=86;DPB=86;DPRA=0;EPP=71.4117;EPPR=36.0317;GTI=0;LEN=1;MEANALT=2;MQM=41.6786;MQMR=42;NS=1;NUMALT=1;ODDS=128.256;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2083;QR=1082;RO=29;RPL=38;RPP=18.5208;RPPR=15.6647;RPR=18;RUN=1;SAF=31;SAP=4.40625;SAR=25;SF=3;SRF=17;SRP=4.88226;SRR=12;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	0/1:-154.749,0,-68.1031:86:29:56:2083:1082:29,56	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr7	81799996	.	C	G	1412.33	.	AB=0.674157;ABP=26.4573;AC=1;AF=0.5;AN=2;AO=60;CIGAR=1X;DP=89;DPB=89;DPRA=0;EPP=79.5909;EPPR=30.0414;GTI=0;LEN=1;MEANALT=1;MQM=41.6667;MQMR=42;NS=1;NUMALT=1;ODDS=129.715;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2143;QR=1104;RO=29;RPL=39;RPP=14.7363;RPPR=19.8579;RPR=21;RUN=1;SAF=32;SAP=3.58936;SAR=28;SF=3;SRF=17;SRP=4.88226;SRR=12;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	0/1:-159.354,0,-68.9816:89:29:60:2143:1104:29,60	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr7	81964578	.	GAAAAAAAAAACTAG	GAAAAAAAAAAACTAG	701.46	.	AB=0;ABP=0;AC=10;AF=1;AN=18;AO=52;CIGAR=1M1I14M;DP=616;DPB=67.3333;DPRA=0;EPP=31.2394;EPPR=3.73412;GTI=0;LEN=1;MEANALT=5;MQM=42;MQMR=42;NS=1;NUMALT=1;ODDS=42.8751;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1819;QR=113;RO=3;RPL=38;RPP=27.0635;RPPR=9.52472;RPR=14;RUN=1;SAF=25;SAP=3.17734;SAR=27;SF=3,6,9,12,16,20,21,25,27;SRF=1;SRP=3.73412;SRR=2;TYPE=ins	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	1/1:-148.361,-6.74187,0:63:3:52:1819:113:3,52	.	.	0/1:-53.1447,0,-33.8499:37:14:21:728:507:14,21	.	.	0/1:-19.0767,0,-36.5682:28:14:10:299:500:14,10	.	.	0/1:-73.8746,0,-60.5912:66:26:31:1044:921:26,31	.	.	.	0/1:-45.5069,0,-43.0006:37:17:17:644:639:17,17	.	.	.	0/1:-76.6147,0,-96.957:79:38:33:1126:1369:38,33	0/1:-22.8019,0,-78.1804:42:29:12:402:1036:29,12	.	.	.	0/1:-157.642,0,-125.337:127:51:64:2203:1833:51,64	.	0/1:-106.323,0,-185.067:137:72:51:1641:2551:72,51	.	.	.	.	.	.	.	.	.
+chr7	91630620	.	G	T	4818.87	.	AB=0.509728;ABP=3.22153;AC=11;AF=0.5;AN=18;AO=131;CIGAR=1X;DP=2526;DPB=257;DPRA=0;EPP=7.8008;EPPR=18.5208;GTI=0;LEN=1;MEANALT=1;MQM=41.855;MQMR=41.9841;NS=1;NUMALT=1;ODDS=747.737;PAIRED=0.984733;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=4983;QR=4764;RO=126;RPL=95;RPP=60.7118;RPPR=9.90386;RPR=36;RUN=1;SAF=83;SAP=23.3161;SAR=48;SF=0,6,9,10,20,21,24,25,27;SRF=73;SRP=9.90386;SRR=53;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	0/1:-351.693,0,-334.437:257:126:131:4983:4764:126,131	.	.	.	.	.	0/1:-394.413,0,-311.358:264:120:144:5483:4521:120,144	.	.	0/1:-277.688,0,-324.552:228:121:107:4005:4559:121,107	0/1:-245.76,0,-321.03:215:119:95:3591:4455:119,95	.	.	.	.	.	.	.	.	.	0/1:-347.056,0,-470.009:308:173:135:5092:6514:173,135	0/1:-318.714,0,-289.938:234:113:121:4541:4161:113,121	.	.	1/1:-542.747,-49.67,0:165:0:165:6288:0:0,165	1/1:-1442.69,-135.162,0:449:0:449:16742:0:0,449	.	0/1:-519.894,0,-539.42:406:205:201:7435:7712:205,201	.	.	.	.	.	.	.	.	.
+chr7	91632306	.	C	T	4638.06	.	AB=0;ABP=0;AC=23;AF=1;AN=26;AO=156;CIGAR=1X;DP=2355;DPB=157;DPRA=0;EPP=120.827;EPPR=0;GTI=0;LEN=1;MEANALT=2;MQM=41.9872;MQMR=0;NS=1;NUMALT=1;ODDS=220.867;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=5917;QR=0;RO=0;RPL=52;RPP=40.6492;RPPR=0;RPR=104;RUN=1;SAF=110;SAP=60.0254;SAR=46;SF=0,3,5,6,9,10,12,16,20,21,24,25,27;SRF=0;SRP=0;SRR=0;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	1/1:-511.381,-46.9607,0:157:0:156:5917:0:0,156	.	.	0/1:-250.407,0,-250.576:193:96:97:3565:3573:96,97	.	0/1:-263.154,0,-203.56:177:79:98:3686:2969:79,98	1/1:-471.891,-44.2514,0:147:0:147:5445:0:0,147	.	.	1/1:-392.222,-36.4246,0:121:0:121:4532:0:0,121	1/1:-419.22,-38.8329,0:129:0:129:4846:0:0,129	.	1/1:-746.478,-69.2369,0:230:0:230:8629:0:0,230	.	.	.	1/1:-521.236,-48.7669,0:162:0:162:6030:0:0,162	.	.	.	1/1:-625.226,-58.7009,0:195:0:195:7253:0:0,195	1/1:-438.665,-40.9401,0:136:0:136:5082:0:0,136	.	.	1/1:-321.513,-29.802,0:99:0:99:3716:0:0,99	1/1:-1034.07,-96.3296,0:320:0:320:11945:0:0,320	.	0/1:-327.158,0,-432.187:289:161:128:4780:6014:161,128	.	.	.	.	.	.	.	.	.
+chr7	91641928	.	A	G	2727.03	.	AB=0.42029;ABP=10.6262;AC=11;AF=0.5;AN=18;AO=58;CIGAR=1X;DP=1497;DPB=138;DPRA=0;EPP=3.16006;EPPR=3.98746;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=42;NS=1;NUMALT=1;ODDS=303.749;PAIRED=0.965517;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2124;QR=3008;RO=80;RPL=37;RPP=12.5947;RPPR=3.44459;RPR=21;RUN=1;SAF=15;SAP=32.3626;SAR=43;SF=0,6,9,10,20,21,24,25,27;SRF=19;SRP=50.8913;SRR=61;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	0/1:-142.763,0,-219.158:138:80:58:2124:3008:80,58	.	.	.	.	.	0/1:-150.992,0,-213.751:139:79:60:2226:2949:79,60	.	.	0/1:-114.356,0,-177.627:114:67:47:1709:2446:67,47	0/1:-200.978,0,-156.403:142:63:78:2885:2306:63,78	.	.	.	.	.	.	.	.	.	0/1:-264.92,0,-221.163:188:86:101:3709:3207:86,101	0/1:-161.717,0,-134.376:116:54:62:2263:1945:54,62	.	.	1/1:-262.744,-24.3834,0:81:0:81:3030:0:0,81	1/1:-944.857,-88.5028,0:294:0:294:10955:0:0,294	.	0/1:-326.248,0,-389.055:285:151:134:4771:5481:151,134	.	.	.	.	.	.	.	.	.
+chr7	91643610	.	G	A	2262.27	.	AB=0.47343;ABP=4.27961;AC=1;AF=0.5;AN=2;AO=98;CIGAR=1X;DP=207;DPB=207;DPRA=0;EPP=8.68272;EPPR=3.03022;GTI=0;LEN=1;MEANALT=1;MQM=41.3776;MQMR=41.6422;NS=1;NUMALT=1;ODDS=520.908;PAIRED=0.989796;PAIREDR=0.990826;PAO=0;PQA=0;PQR=0;PRO=0;QA=3548;QR=4013;RO=109;RPL=20;RPP=77.5494;RPPR=67.7361;RPR=78;RUN=1;SAF=55;SAP=6.20103;SAR=43;SF=5;SRF=58;SRP=3.98647;SRR=51;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	0/1:-241.647,0,-283.062:207:109:98:3548:4013:109,98	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr7	91646406	.	G	A	1843.69	.	AB=0.438202;ABP=8.91475;AC=1;AF=0.5;AN=2;AO=78;CIGAR=1X;DP=178;DPB=178;DPRA=0;EPP=19.0458;EPPR=51.4626;GTI=0;LEN=1;MEANALT=2;MQM=41.9744;MQMR=41.9798;NS=1;NUMALT=1;ODDS=424.525;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2876;QR=3544;RO=99;RPL=31;RPP=10.1372;RPPR=4.78696;RPR=47;RUN=1;SAF=52;SAP=21.8297;SAR=26;SF=25;SRF=58;SRP=9.34924;SRR=41;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-195.477,0,-254.946:178:99:78:2876:3544:99,78	.	.	.	.	.	.	.	.	.	.	.
+chr7	91652178	.	AAACT	AAACAACT	4776.22	.	AB=0.463235;ABP=6.20364;AC=11;AF=0.5;AN=18;AO=126;CIGAR=1M3I4M;DP=2742;DPB=349.4;DPRA=0;EPP=9.90386;EPPR=42.5068;GTI=0;LEN=3;MEANALT=4;MQM=41.5556;MQMR=42;NS=1;NUMALT=1;ODDS=709.661;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=4633;QR=5388;RO=143;RPL=40;RPP=39.4772;RPPR=52.3468;RPR=86;RUN=1;SAF=67;SAP=4.11327;SAR=59;SF=0,6,9,10,20,21,24,25,27;SRF=75;SRP=3.75437;SRR=68;TYPE=ins	GT:GL:DP:RO:AO:QA:QR:AD	0/1:-319.693,0,-385.662:272:143:126:4633:5388:143,126	.	.	.	.	.	0/1:-310.992,0,-281.507:237:110:122:4394:4059:110,122	.	.	0/1:-201.806,0,-405.538:232:146:85:3137:5486:146,85	0/1:-340.933,0,-249.023:235:98:131:4729:3667:98,131	.	.	.	.	.	.	.	.	.	0/1:-417.765,0,-573.086:386:212:171:6165:7964:212,171	0/1:-232.775,0,-345.626:234:129:103:3486:4788:129,103	.	.	1/1:-674.369,-64.1194,0:213:0:213:7784:0:0,213	1/1:-1510.82,-140.849,0:496:2:486:17524:69:2,486	.	0/1:-454.63,0,-668.487:437:249:185:6754:9216:249,185	.	.	.	.	.	.	.	.	.
+chr7	91691601	.	C	T	3698.48	.	AB=0.573604;ABP=12.2804;AC=11;AF=0.5;AN=18;AO=113;CIGAR=1X;DP=1834;DPB=197;DPRA=0;EPP=3.49071;EPPR=5.59539;GTI=0;LEN=1;MEANALT=1;MQM=41.9823;MQMR=42;NS=1;NUMALT=1;ODDS=445.813;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=4181;QR=3013;RO=84;RPL=40;RPP=23.9371;RPPR=11.386;RPR=73;RUN=1;SAF=72;SAP=21.4774;SAR=41;SF=0,6,9,10,20,21,24,25,27;SRF=48;SRP=6.73282;SRR=36;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	0/1:-303.035,0,-202.429:197:84:113:4181:3013:84,113	.	.	.	.	.	0/1:-256.034,0,-195.77:176:80:96:3563:2862:80,96	.	.	0/1:-194.561,0,-150.635:133:60:73:2706:2195:60,73	0/1:-178.871,0,-211.687:148:80:68:2580:2954:80,68	.	.	.	.	.	.	.	.	.	0/1:-197.508,0,-315.492:198:118:80:2970:4330:118,80	0/1:-236.986,0,-212.602:181:88:93:3355:3067:88,93	.	.	1/1:-432.637,-40.338,0:134:0:134:4994:0:0,134	1/1:-1243.14,-117.402,0:390:0:390:14384:0:0,390	.	0/1:-379.813,0,-304.262:277:124:153:5354:4463:124,153	.	.	.	.	.	.	.	.	.
+chr7	91707197	.	C	T	942.46	.	AB=0.516129;ABP=3.15039;AC=11;AF=0.5;AN=18;AO=32;CIGAR=1X;DP=570;DPB=62;DPRA=0;EPP=3.28173;EPPR=3.29983;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=40.8;NS=1;NUMALT=1;ODDS=143.947;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1219;QR=1062;RO=30;RPL=28;RPP=42.0968;RPPR=44.7026;RPR=4;RUN=1;SAF=13;SAP=5.45321;SAR=19;SF=0,6,9,10,20,21,24,25,27;SRF=13;SRP=4.16842;SRR=17;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	0/1:-86.909,0,-72.7683:62:30:32:1219:1062:30,32	.	.	.	.	.	0/1:-42.0403,0,-73.2521:45:28:17:638:1025:28,17	.	.	0/1:-40.7097,0,-58.9964:38:22:16:599:807:22,16	0/1:-80.9076,0,-19.6726:39:10:29:1066:356:10,29	.	.	.	.	.	.	.	.	.	0/1:-79.6026,0,-104.652:71:39:32:1162:1454:39,32	0/1:-68.8705,0,-87.7428:61:34:27:1007:1218:34,27	.	.	1/1:-96.6011,-9.0309,0:30:0:30:1112:0:0,30	1/1:-338.642,-32.5112,0:108:0:108:3903:0:0,108	.	0/1:-114.478,0,-174.89:116:68:48:1716:2411:68,48	.	.	.	.	.	.	.	.	.
+chr7	91708898	.	A	G	4112.96	.	AB=0.517241;ABP=3.60933;AC=3;AF=0.5;AN=6;AO=120;CIGAR=1X;DP=913;DPB=232;DPRA=0;EPP=68.1545;EPPR=47.6806;GTI=0;LEN=1;MEANALT=1;MQM=41.9833;MQMR=42;NS=1;NUMALT=1;ODDS=657.281;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=4544;QR=4250;RO=112;RPL=59;RPP=3.08268;RPPR=5.80219;RPR=61;RUN=1;SAF=61;SAP=3.08268;SAR=59;SF=3,5,27;SRF=60;SRP=4.25114;SRR=52;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	0/1:-322.668,0,-297.137:232:112:120:4544:4250:112,120	.	0/1:-425.541,0,-317.132:278:122:156:5898:4644:122,156	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-526.279,0,-537.754:403:203:200:7490:7624:203,200	.	.	.	.	.	.	.	.	.
+chr7	91712698	.	A	G	3481.76	.	AB=0.497487;ABP=3.02121;AC=11;AF=0.5;AN=18;AO=99;CIGAR=1X;DP=1785;DPB=199;DPRA=0;EPP=26.8965;EPPR=31.1526;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=41.82;NS=1;NUMALT=1;ODDS=570.635;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3708;QR=3804;RO=100;RPL=32;RPP=29.8795;RPPR=15.518;RPR=67;RUN=1;SAF=62;SAP=16.7191;SAR=37;SF=0,6,9,10,20,21,24,25,27;SRF=60;SRP=11.6962;SRR=40;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	0/1:-260.862,0,-267.603:199:100:99:3708:3804:100,99	.	.	.	.	.	0/1:-165.576,0,-206.835:139:76:63:2398:2874:76,63	.	.	0/1:-183.475,0,-185.893:142:71:71:2612:2642:71,71	0/1:-256.417,0,-165.29:160:66:94:3527:2468:66,94	.	.	.	.	.	.	.	.	.	0/1:-248.366,0,-322.552:215:118:97:3619:4486:118,97	0/1:-203.466,0,-204.857:158:79:79:2897:2945:79,79	.	.	1/1:-388.044,-36.4246,0:121:0:121:4477:0:0,121	1/1:-1156.64,-106.973,0:361:1:360:13403:17:1,360	.	0/1:-391.913,0,-360.523:290:138:151:5528:5190:138,151	.	.	.	.	.	.	.	.	.
+chr7	91713972	.	C	T	1468.97	.	AB=0.530864;ABP=3.68051;AC=11;AF=0.5;AN=18;AO=43;CIGAR=1X;DP=811;DPB=81;DPRA=0;EPP=7.10075;EPPR=14.2105;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=42;NS=1;NUMALT=1;ODDS=205.322;PAIRED=1;PAIREDR=0.973684;PAO=0;PQA=0;PQR=0;PRO=0;QA=1619;QR=1406;RO=38;RPL=26;RPP=7.10075;RPPR=8.7247;RPR=17;RUN=1;SAF=26;SAP=7.10075;SAR=17;SF=0,6,9,10,20,21,24,25,27;SRF=26;SRP=14.2105;SRR=12;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	0/1:-116.061,0,-97.757:81:38:43:1619:1406:38,43	.	.	.	.	.	0/1:-99.6528,0,-100.342:78:40:38:1421:1430:40,38	.	.	0/1:-63.4499,0,-78.2695:54:29:25:917:1087:29,25	0/1:-94.3171,0,-115.589:81:44:37:1366:1623:44,37	.	.	.	.	.	.	.	.	.	0/1:-107.076,0,-136.286:93:50:43:1555:1898:50,43	0/1:-111.001,0,-99.1966:81:39:42:1559:1429:39,42	.	.	1/1:-156.063,-14.7505,0:49:0:49:1811:0:0,49	1/1:-460.362,-42.8134,0:147:1:146:5337:15:1,146	.	0/1:-184.205,0,-185.373:147:73:74:2627:2671:73,74	.	.	.	.	.	.	.	.	.
+chr7	91714092	.	ATTTTTTTTTTTTTAACAG	ATTTTTTTTTTTTAACAG	18.41	.	AB=0.148515;ABP=111.39;AC=1;AF=0.5;AN=2;AO=15;CIGAR=1M1D17M;DP=101;DPB=100.263;DPRA=0;EPP=10.1038;EPPR=44.88;GTI=0;LEN=1;MEANALT=9;MQM=40.7333;MQMR=41.9437;NS=1;NUMALT=1;ODDS=4.22419;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=492;QR=2424;RO=71;RPL=11;RPP=10.1038;RPPR=6.71098;RPR=4;RUN=1;SAF=9;SAP=4.31318;SAR=6;SF=21;SRF=36;SRP=3.04088;SRR=35;TYPE=del	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-16.9617,0,-187.011:101:71:15:492:2424:71,15	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr7	91714911	.	C	T	6531.70	.	AB=0;ABP=0;AC=26;AF=1;AN=26;AO=202;CIGAR=1X;DP=2655;DPB=202;DPRA=0;EPP=7.31025;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=0;NS=1;NUMALT=1;ODDS=284.637;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=7637;QR=0;RO=0;RPL=110;RPP=6.49326;RPPR=0;RPR=92;RUN=1;SAF=101;SAP=3.0103;SAR=101;SF=0,3,5,6,9,10,12,16,20,21,24,25,27;SRF=0;SRP=0;SRR=0;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	1/1:-659.666,-60.8081,0:202:0:202:7637:0:0,202	.	.	1/1:-591.732,-55.0885,0:183:0:183:6846:0:0,183	.	1/1:-697.607,-65.0225,0:216:0:216:8094:0:0,216	1/1:-617.036,-57.7978,0:192:0:192:7135:0:0,192	.	.	1/1:-448.108,-41.8432,0:139:0:139:5195:0:0,139	1/1:-537.207,-51.4761,0:171:0:171:6248:0:0,171	.	1/1:-969.495,-90.008,0:299:0:299:11258:0:0,299	.	.	.	1/1:-588.156,-54.1854,0:181:0:180:6824:0:0,180	.	.	.	1/1:-723.95,-67.1297,0:223:0:223:8410:0:0,223	1/1:-379.64,-36.7257,0:123:0:122:4380:0:0,122	.	.	1/1:-346.496,-31.6082,0:105:0:105:4010:0:0,105	1/1:-1108.07,-103.253,0:343:0:343:12858:0:0,343	.	1/1:-883.956,-83.3853,0:278:0:277:10227:0:0,277	.	.	.	.	.	.	.	.	.
+chr7	91715662	.	C	T	4782.90	.	AB=0.459627;ABP=7.56904;AC=11;AF=0.5;AN=18;AO=148;CIGAR=1X;DP=2695;DPB=322;DPRA=0;EPP=3.24505;EPPR=5.45633;GTI=0;LEN=1;MEANALT=1;MQM=41.9865;MQMR=41.8966;NS=1;NUMALT=1;ODDS=810.879;PAIRED=1;PAIREDR=0.994253;PAO=0;PQA=0;PQR=0;PRO=0;QA=5406;QR=6295;RO=174;RPL=120;RPP=127.195;RPPR=113.281;RPR=28;RUN=1;SAF=70;SAP=3.94932;SAR=78;SF=0,6,9,10,20,21,24,25,27;SRF=90;SRP=3.45957;SRR=84;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	0/1:-372.906,0,-448.892:322:174:148:5406:6295:174,148	.	.	.	.	.	0/1:-346.434,0,-295.811:254:121:133:4869:4281:121,133	.	.	0/1:-277.452,0,-239.581:200:94:106:3918:3457:94,106	0/1:-303.499,0,-362.735:257:137:120:4386:5069:137,120	.	.	.	.	.	.	.	.	.	0/1:-458.567,0,-508.72:377:196:180:6593:7205:196,180	0/1:-240.852,0,-330.443:226:129:97:3551:4575:129,97	.	.	1/1:-478.203,-46.0576,0:153:0:153:5520:0:0,153	1/1:-1420.75,-135.765,0:454:0:451:16365:0:0,451	.	0/1:-559.394,0,-582.668:452:232:220:8008:8260:232,220	.	.	.	.	.	.	.	.	.
+chr7	91726927	.	A	C	4890.15	.	AB=0.534351;ABP=5.69563;AC=11;AF=0.5;AN=18;AO=140;CIGAR=1X;DP=2575;DPB=262;DPRA=0;EPP=13.4954;EPPR=16.9647;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=42;NS=1;NUMALT=1;ODDS=705.53;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=5180;QR=4638;RO=122;RPL=68;RPP=3.25847;RPPR=3.65106;RPR=72;RUN=1;SAF=101;SAP=62.6327;SAR=39;SF=0,6,9,10,20,21,24,25,27;SRF=91;SRP=67.0865;SRR=31;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	0/1:-369.76,0,-321.504:262:122:140:5180:4638:122,140	.	.	.	.	.	0/1:-205.356,0,-292.638:189:107:82:3041:4043:107,82	.	.	0/1:-255.08,0,-299.22:212:112:100:3678:4215:112,100	0/1:-320.722,0,-318.219:247:122:125:4558:4540:122,125	.	.	.	.	.	.	.	.	.	0/1:-359.986,0,-442.333:307:165:142:5229:6202:165,142	0/1:-237.414,0,-269.807:196:104:92:3423:3793:104,92	.	.	1/1:-612.241,-58.3998,0:194:0:194:7063:0:0,194	1/1:-1602.85,-151.117,0:502:0:502:18597:0:0,502	.	0/1:-595.027,0,-601.388:466:233:233:8513:8569:233,233	.	.	.	.	.	.	.	.	.
+chr7	91729127	.	A	G	5268.16	.	AB=0.543243;ABP=9.02;AC=1;AF=0.5;AN=2;AO=201;CIGAR=1X;DP=370;DPB=370;DPRA=0;EPP=3.10753;EPPR=4.05106;GTI=0;LEN=1;MEANALT=1;MQM=41.9801;MQMR=41.8876;NS=1;NUMALT=1;ODDS=983.721;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=7530;QR=6447;RO=169;RPL=128;RPP=35.6904;RPPR=36.4304;RPR=73;RUN=1;SAF=78;SAP=24.8871;SAR=123;SF=0;SRF=51;SRP=60.6892;SRR=118;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	0/1:-540.047,0,-444.215:370:169:201:7530:6447:169,201	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr7	92085669	.	C	T	2055.74	.	AB=0.655462;ABP=27.9914;AC=1;AF=0.5;AN=2;AO=78;CIGAR=1X;DP=119;DPB=119;DPRA=0;EPP=12.0303;EPPR=5.60547;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=42;NS=1;NUMALT=1;ODDS=184.114;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2971;QR=1451;RO=41;RPL=20;RPP=43.2104;RPPR=7.30028;RPR=58;RUN=1;SAF=50;SAP=16.4846;SAR=28;SF=6;SRF=29;SRP=18.3165;SRR=12;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	0/1:-220.75,0,-90.5497:119:41:78:2971:1451:41,78	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr7	92085763	.	C	T	4754.16	.	AB=0.495979;ABP=3.06269;AC=1;AF=0.5;AN=2;AO=185;CIGAR=1X;DP=373;DPB=373;DPRA=0;EPP=9.21954;EPPR=12.1632;GTI=0;LEN=1;MEANALT=3;MQM=41.8919;MQMR=41.7366;NS=1;NUMALT=1;ODDS=1071.18;PAIRED=0.994595;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=6926;QR=6773;RO=186;RPL=114;RPP=24.7133;RPPR=27.7137;RPR=71;RUN=1;SAF=76;SAP=15.7926;SAR=109;SF=27;SRF=89;SRP=3.75747;SRR=97;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-485.669,0,-474.861:373:186:185:6926:6773:186,185	.	.	.	.	.	.	.	.	.
+chr7	128477472	.	T	C	58.05	.	AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X;DP=2;DPB=2;DPRA=0;EPP=7.35324;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=0;NS=1;NUMALT=1;ODDS=7.37776;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=77;QR=0;RO=0;RPL=1;RPP=3.0103;RPPR=0;RPR=1;RUN=1;SAF=1;SAP=3.0103;SAR=1;SF=25;SRF=0;SRP=0;SRR=0;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	1/1:-7.00916,-0.60206,0:2:0:2:77:0:0,2	.	.	.	.	.	.	.	.	.	.	.
+chr7	150645534	.	T	G	1659.75	.	AB=0.556604;ABP=5.96022;AC=7;AF=0.5;AN=12;AO=59;CIGAR=1X;DP=739;DPB=106;DPRA=0;EPP=19.2411;EPPR=30.2009;GTI=0;LEN=1;MEANALT=2;MQM=39.661;MQMR=42;NS=1;NUMALT=1;ODDS=183.023;PAIRED=0.881356;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2035;QR=1552;RO=46;RPL=3;RPP=106.394;RPPR=102.898;RPR=56;RUN=1;SAF=39;SAP=16.2968;SAR=20;SF=0,3,5,6,25,27;SRF=35;SRP=30.2009;SRR=11;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	0/1:-139.839,0,-104.234:106:46:59:2035:1552:46,59	.	.	0/1:-97.5629,0,-155.802:104:59:45:1557:2148:59,45	.	0/1:-179.128,0,-125.205:123:53:70:2474:1909:53,70	0/1:-91.982,0,-120.596:85:47:38:1343:1668:47,38	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-211.283,0,-188.43:172:79:88:3075:2732:79,88	.	1/1:-456.68,-44.8535,0:149:0:149:5231:0:0,149	.	.	.	.	.	.	.	.	.
+chr7	150648198	.	A	G	4472.28	.	AB=0;ABP=0;AC=18;AF=1;AN=22;AO=199;CIGAR=1X;DP=2171;DPB=199;DPRA=0;EPP=21.3532;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=38.6332;MQMR=0;NS=1;NUMALT=1;ODDS=280.478;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=7349;QR=0;RO=0;RPL=151;RPP=118.775;RPPR=0;RPR=48;RUN=1;SAF=37;SAP=173.509;SAR=162;SF=0,3,5,6,9,10,16,21,24,25,27;SRF=0;SRP=0;SRR=0;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	1/1:-601.296,-59.905,0:199:0:199:7349:0:0,199	.	.	1/1:-657.498,-66.2266,0:220:0:220:8004:0:0,220	.	0/1:-197.399,0,-374.455:225:137:88:3250:5157:137,88	1/1:-563.141,-52.3926,0:186:1:185:6794:39:1,185	.	.	0/1:-199.528,0,-232.089:180:93:86:3149:3369:93,86	1/1:-622.239,-63.5173,0:211:0:211:7691:0:0,211	.	.	.	.	.	1/1:-566.556,-57.4967,0:192:0:191:6904:0:0,191	.	.	.	.	0/1:-41.2123,0,-212.051:100:78:22:817:2804:78,22	.	.	0/1:-124.063,0,-119.357:100:48:52:1904:1733:48,52	1/1:-921.986,-90.9111,0:304:0:302:11068:0:0,302	.	1/1:-766.493,-69.5052,0:254:2:252:9130:78:2,252	.	.	.	.	.	.	.	.	.
+chr7	150648789	.	T	C	7817.42	.	AB=0.5;ABP=3.0103;AC=10;AF=0.5;AN=16;AO=271;CIGAR=1X;DP=3884;DPB=542;DPRA=0;EPP=5.326;EPPR=4.81318;GTI=0;LEN=1;MEANALT=1;MQM=39.6015;MQMR=41.214;NS=1;NUMALT=1;ODDS=1431.25;PAIRED=0.99631;PAIREDR=0.99262;PAO=0;PQA=0;PQR=0;PRO=0;QA=9633;QR=9922;RO=271;RPL=178;RPP=60.9029;RPPR=30.9029;RPR=93;RUN=1;SAF=114;SAP=17.826;SAR=157;SF=3,6,9,10,16,21,24,25;SRF=112;SRP=20.7106;SRR=159;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	0/1:-636.573,0,-688.925:542:271:271:9633:9922:271,271	.	.	0/1:-462.579,0,-535.548:410:208:201:6998:7614:208,201	.	.	0/1:-565.339,0,-620.374:484:242:240:8437:8921:242,240	1/1:-1604.92,-163.158,0:542:0:542:19157:0:0,542	.	.	.	.	.	1/1:-1709.52,-169.781,0:564:0:564:20349:0:0,564	.	.	.	.	0/1:-77.2488,0,-489.586:235:184:49:1689:6515:184,49	.	.	0/1:-310.684,0,-349.483:267:137:129:4596:4991:137,129	0/1:-1029.79,0,-1020.91:840:402:436:15231:14766:402,436	.	.	.	.	.	.	.	.	.	.	.
+chr7	150649531	.	G	A	5013.93	.	AB=0.449807;ABP=14.3456;AC=8;AF=0.5;AN=16;AO=233;CIGAR=1X;DP=3553;DPB=518;DPRA=0;EPP=27.2506;EPPR=9.00479;GTI=0;LEN=1;MEANALT=2;MQM=39.7639;MQMR=40.8345;NS=1;NUMALT=1;ODDS=1252.61;PAIRED=0.987124;PAIREDR=0.989437;PAO=0;PQA=0;PQR=0;PRO=0;QA=8690;QR=10421;RO=284;RPL=79;RPP=55.4332;RPPR=67.7263;RPR=154;RUN=1;SAF=157;SAP=64.1564;SAR=76;SF=3,6,9,10,16,21,24,25;SRF=172;SRP=30.536;SRR=112;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	0/1:-566.356,0,-735.763:518:284:233:8690:10421:284,233	.	.	0/1:-522.611,0,-514.606:405:200:205:7648:7460:200,205	.	.	0/1:-492.362,0,-574.474:418:221:196:7372:8158:221,196	0/1:-697.504,0,-602.741:523:241:282:10470:8828:241,282	.	.	.	.	.	0/1:-638.3,0,-663.287:505:258:247:9275:9605:258,247	.	.	.	.	0/1:-119.573,0,-419.173:220:159:60:2204:5693:159,60	.	.	0/1:-280.249,0,-311.478:234:121:112:4188:4498:121,112	0/1:-914.483,0,-897.489:730:356:373:13662:13063:356,373	.	.	.	.	.	.	.	.	.	.	.
+chr7	150649603	.	G	A	6391.95	.	AB=0.458143;ABP=13.0083;AC=8;AF=0.5;AN=16;AO=301;CIGAR=1X;DP=4822;DPB=657;DPRA=0;EPP=55.1329;EPPR=34.6308;GTI=0;LEN=1;MEANALT=1;MQM=37.2658;MQMR=39.3427;NS=1;NUMALT=1;ODDS=1447.36;PAIRED=0.986711;PAIREDR=0.988764;PAO=0;PQA=0;PQR=0;PRO=0;QA=10620;QR=12688;RO=356;RPL=161;RPP=6.19176;RPPR=20.7969;RPR=140;RUN=1;SAF=177;SAP=23.275;SAR=124;SF=3,6,9,10,16,21,24,25;SRF=189;SRP=5.96253;SRR=167;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	0/1:-644.714,0,-868.975:657:356:301:10620:12688:356,301	.	.	0/1:-626.969,0,-706.897:554:285:269:9665:10329:285,269	.	.	0/1:-578.476,0,-756.164:571:304:265:9254:10971:304,265	0/1:-847.4,0,-836.88:715:339:374:13401:12352:339,374	.	.	.	.	.	0/1:-764.323,0,-885.535:696:362:333:11862:13093:362,333	.	.	.	.	0/1:-100.877,0,-471.365:249:189:60:2032:6506:189,60	.	.	0/1:-444.363,0,-396.764:354:166:188:6809:5965:166,188	0/1:-1246.77,0,-1140.18:1026:482:541:19282:17178:482,541	.	.	.	.	.	.	.	.	.	.	.
+chr7	150655219	.	C	T	37.87	.	AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X;DP=2;DPB=2;DPRA=0;EPP=3.0103;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=0;NS=1;NUMALT=1;ODDS=7.37776;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=54;QR=0;RO=0;RPL=2;RPP=7.35324;RPPR=0;RPR=0;RUN=1;SAF=1;SAP=3.0103;SAR=1;SF=6;SRF=0;SRP=0;SRR=0;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	1/1:-4.99075,-0.60206,0:2:0:2:54:0:0,2	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr7	150655361	.	C	A	54.39	.	AB=0;ABP=0;AC=2;AF=1;AN=2;AO=2;CIGAR=1X;DP=2;DPB=2;DPRA=0;EPP=3.0103;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=0;NS=1;NUMALT=1;ODDS=5.29832;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=72;QR=0;RO=0;RPL=0;RPP=7.35324;RPPR=0;RPR=2;RUN=1;SAF=1;SAP=3.0103;SAR=1;SF=27;SRF=0;SRP=0;SRR=0;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	1/1:-6.64108,-0.60206,0:2:0:2:72:0:0,2	.	.	.	.	.	.	.	.	.
+chr7	151262385	.	T	C	600.14	.	AB=0.377778;ABP=8.84915;AC=5;AF=0.5;AN=10;AO=17;CIGAR=1X;DP=308;DPB=45;DPRA=0;EPP=3.13803;EPPR=5.80219;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=42;NS=1;NUMALT=1;ODDS=77.0864;PAIRED=1;PAIREDR=0.964286;PAO=0;PQA=0;PQR=0;PRO=0;QA=628;QR=1043;RO=28;RPL=4;RPP=13.3567;RPPR=14.1779;RPR=13;RUN=1;SAF=13;SAP=13.3567;SAR=4;SF=6,9,20,21,25;SRF=19;SRP=10.7656;SRR=9;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	0/1:-41.1955,0,-77.0188:45:28:17:628:1043:28,17	.	.	0/1:-63.041,0,-49.8434:43:20:23:875:722:20,23	.	.	.	.	.	.	.	.	.	.	0/1:-55.6555,0,-91.6401:56:33:23:833:1251:33,23	0/1:-19.5189,0,-95.1246:44:34:10:374:1244:34,10	.	.	.	0/1:-162.774,0,-146.56:120:57:62:2308:2121:57,62	.	.	.	.	.	.	.	.	.	.	.
+chr7	151262528	.	A	C	353.03	.	AB=0.535714;ABP=3.32051;AC=1;AF=0.5;AN=2;AO=15;CIGAR=1X;DP=28;DPB=28;DPRA=0;EPP=3.15506;EPPR=4.51363;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=42;NS=1;NUMALT=1;ODDS=67.9895;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=563;QR=500;RO=13;RPL=11;RPP=10.1038;RPPR=16.5402;RPR=4;RUN=1;SAF=4;SAP=10.1038;SAR=11;SF=24;SRF=5;SRP=4.51363;SRR=8;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-40.6717,0,-35.0576:28:13:15:563:500:13,15	.	.	.	.	.	.	.	.	.	.	.	.
+chr7	151267353	.	G	A	1322.62	.	AB=0.544118;ABP=4.1599;AC=3;AF=0.5;AN=6;AO=37;CIGAR=1X;DP=269;DPB=68;DPRA=0;EPP=12.9286;EPPR=3.64073;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=42;NS=1;NUMALT=1;ODDS=162.215;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1312;QR=1142;RO=31;RPL=33;RPP=52.3673;RPPR=14.8483;RPR=4;RUN=1;SAF=8;SAP=28.8919;SAR=29;SF=0,12,16;SRF=8;SRP=18.771;SRR=23;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	0/1:-94.0646,0,-78.949:68:31:37:1312:1142:31,37	.	.	.	.	.	.	.	.	.	.	.	0/1:-190.765,0,-93.4044:110:40:70:2579:1456:40,70	.	.	.	0/1:-155.151,0,-82.6494:91:34:57:2102:1269:34,57	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr7	151329255	.	A	G	29.94	.	AB=0.5;ABP=3.0103;AC=1;AF=0.5;AN=2;AO=2;CIGAR=1X;DP=4;DPB=4;DPRA=0;EPP=3.0103;EPPR=3.0103;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=42;NS=1;NUMALT=1;ODDS=6.89266;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=75;QR=76;RO=2;RPL=2;RPP=7.35324;RPPR=7.35324;RPR=0;RUN=1;SAF=1;SAP=3.0103;SAR=1;SF=24;SRF=1;SRP=3.0103;SRR=1;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-5.66929,0,-5.73939:4:2:2:75:76:2,2	.	.	.	.	.	.	.	.	.	.	.	.
+chr7	151573580	.	G	A	1766.70	.	AB=0.484663;ABP=3.34335;AC=2;AF=0.5;AN=4;AO=79;CIGAR=1X;DP=350;DPB=163;DPRA=0;EPP=5.23675;EPPR=3.42391;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=42;NS=1;NUMALT=1;ODDS=369.863;PAIRED=0.987342;PAIREDR=0.988095;PAO=0;PQA=0;PQR=0;PRO=0;QA=2544;QR=2838;RO=84;RPL=22;RPP=36.6819;RPPR=62.5707;RPR=57;RUN=1;SAF=57;SAP=36.6819;SAR=22;SF=0,20;SRF=56;SRP=23.2774;SRR=28;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	0/1:-174.112,0,-198.86:163:84:79:2544:2838:84,79	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-207.599,0,-219.404:187:93:92:3007:3152:93,92	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr7	151573731	.	G	A	789.05	.	AB=0.40625;ABP=12.7819;AC=2;AF=0.5;AN=4;AO=52;CIGAR=1X;DP=201;DPB=128;DPRA=0;EPP=5.68288;EPPR=12.2676;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=42;NS=1;NUMALT=1;ODDS=277.9;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1966;QR=2859;RO=76;RPL=34;RPP=13.7006;RPPR=22.325;RPR=18;RUN=1;SAF=14;SAP=27.0635;SAR=38;SF=0,21;SRF=22;SRP=32.268;SRR=54;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	0/1:-131.469,0,-209.105:128:76:52:1966:2859:76,52	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-46.9316,0,-137.183:73:51:22:792:1826:51,22	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr9	71650752	.	A	G	535.00	.	AB=0;ABP=0;AC=26;AF=1;AN=26;AO=14;CIGAR=1X;DP=250;DPB=14;DPRA=0;EPP=3.0103;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=0;NS=1;NUMALT=1;ODDS=24.0133;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=523;QR=0;RO=0;RPL=8;RPP=3.63072;RPPR=0;RPR=6;RUN=1;SAF=7;SAP=3.0103;SAR=7;SF=0,3,5,6,9,10,12,16,20,21,24,25,27;SRF=0;SRP=0;SRR=0;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	1/1:-45.7436,-4.21442,0:14:0:14:523:0:0,14	.	.	1/1:-88.7949,-8.42884,0:28:0:28:1018:0:0,28	.	1/1:-86.7188,-8.42884,0:28:0:28:990:0:0,28	1/1:-6.79932,-0.60206,0:2:0:2:74:0:0,2	.	.	1/1:-88.1084,-8.72987,0:29:0:29:1004:0:0,29	1/1:-50.025,-4.81648,0:16:0:16:569:0:0,16	.	1/1:-128.298,-12.6433,0:42:0:42:1470:0:0,42	.	.	.	1/1:-64.7378,-6.0206,0:20:0:20:742:0:0,20	.	.	.	1/1:-98.4361,-9.93399,0:33:0:33:1126:0:0,33	1/1:-14.1226,-1.50515,0:5:0:5:157:0:0,5	.	.	1/1:-6.38754,-0.60206,0:2:0:2:70:0:0,2	1/1:-61.1144,-6.62266,0:22:0:22:693:0:0,22	.	1/1:-26.7373,-2.70927,0:9:0:9:327:0:0,9	.	.	.	.	.	.	.	.	.
+chr9	71668197	.	T	C	2209.58	.	AB=0;ABP=0;AC=17;AF=1;AN=24;AO=91;CIGAR=1X;DP=1310;DPB=91;DPRA=0;EPP=103.829;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=41.7473;MQMR=0;NS=1;NUMALT=1;ODDS=130.758;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=3391;QR=0;RO=0;RPL=63;RPP=32.2417;RPPR=0;RPR=28;RUN=1;SAF=54;SAP=9.90651;SAR=37;SF=0,3,6,9,10,12,16,20,21,24,25,27;SRF=0;SRP=0;SRR=0;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	1/1:-292.17,-27.3937,0:91:0:91:3391:0:0,91	.	.	1/1:-275.334,-25.2865,0:84:0:84:3191:0:0,84	.	.	0/1:-133.852,0,-70.2957:77:29:48:1818:1079:29,48	.	.	1/1:-272.406,-24.9855,0:83:0:83:3159:0:0,83	0/1:-121.543,0,-123.598:92:46:46:1724:1752:46,46	.	0/1:-195.791,0,-165.231:135:63:72:2753:2386:63,72	.	.	.	1/1:-402.904,-37.0267,0:123:0:123:4675:0:0,123	.	.	.	0/1:-98.2756,0,-203.773:113:72:41:1532:2756:72,41	0/1:-195.742,0,-78.0545:104:34:70:2625:1263:34,70	.	.	0/1:-70.9549,0,-65.4692:53:25:28:1001:940:25,28	1/1:-492.563,-44.6938,0:160:1:158:5763:35:1,158	.	0/1:-283.463,0,-237.028:195:91:104:3984:3423:91,104	.	.	.	.	.	.	.	.	.
+chr9	103348319	.	C	T	2563.22	.	AB=0.497738;ABP=3.02013;AC=1;AF=0.5;AN=2;AO=110;CIGAR=1X;DP=221;DPB=221;DPRA=0;EPP=9.40627;EPPR=11.6375;GTI=0;LEN=1;MEANALT=1;MQM=41.8091;MQMR=41.8288;NS=1;NUMALT=1;ODDS=590.203;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3829;QR=3994;RO=111;RPL=75;RPP=34.5954;RPPR=8.66395;RPR=35;RUN=1;SAF=51;SAP=4.2737;SAR=59;SF=24;SRF=48;SRP=7.41193;SRR=63;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-265.962,0,-280.561:221:111:110:3829:3994:111,110	.	.	.	.	.	.	.	.	.	.	.	.
+chr9	103348634	.	G	A	2160.89	.	AB=0.368421;ABP=23.0107;AC=8;AF=0.5;AN=14;AO=49;CIGAR=1X;DP=974;DPB=133;DPRA=0;EPP=10.4997;EPPR=7.43173;GTI=0;LEN=1;MEANALT=2;MQM=41.6327;MQMR=41.9759;NS=1;NUMALT=1;ODDS=252.986;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1851;QR=3043;RO=83;RPL=20;RPP=6.59988;RPPR=14.5479;RPR=29;RUN=1;SAF=28;SAP=5.18177;SAR=21;SF=0,9,10,12,21,24,27;SRF=45;SRP=4.29225;SRR=38;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	0/1:-119.083,0,-224.358:133:83:49:1851:3043:83,49	.	.	.	.	.	.	.	.	0/1:-138.135,0,-137.288:106:53:53:1975:1947:53,53	0/1:-168.08,0,-166.859:130:65:65:2391:2370:65,65	.	0/1:-235.845,0,-236.091:182:92:90:3378:3352:92,90	.	.	.	.	.	.	.	.	0/1:-66.3879,0,-178.324:97:67:30:1131:2395:67,30	.	.	0/1:-125.807,0,-120.966:95:48:47:1795:1719:48,47	.	.	1/1:-732.44,-69.5379,0:231:0:231:8477:0:0,231	.	.	.	.	.	.	.	.	.
+chr9	108363426	.	C	T	788.36	.	AB=0.5;ABP=3.0103;AC=2;AF=0.5;AN=4;AO=41;CIGAR=1X;DP=179;DPB=82;DPRA=0;EPP=3.48696;EPPR=3.06326;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=41.561;NS=1;NUMALT=1;ODDS=215.918;PAIRED=0.97561;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1509;QR=1486;RO=41;RPL=15;RPP=9.41879;RPPR=5.60547;RPR=26;RUN=1;SAF=35;SAP=47.552;SAR=6;SF=10,21;SRF=35;SRP=47.552;SRR=6;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	0/1:-106.269,0,-104.591:82:41:41:1509:1486:41,41	.	.	.	.	.	.	.	.	.	.	0/1:-74.8876,0,-171.418:97:63:33:1192:2306:63,33	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr9	108366499	.	G	A	1183.59	.	AB=0.494845;ABP=3.03269;AC=1;AF=0.5;AN=2;AO=48;CIGAR=1X;DP=97;DPB=97;DPRA=0;EPP=14.5915;EPPR=19.0083;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=41.9592;NS=1;NUMALT=1;ODDS=272.533;PAIRED=1;PAIREDR=0.979592;PAO=0;PQA=0;PQR=0;PRO=0;QA=1807;QR=1841;RO=49;RPL=15;RPP=17.6677;RPPR=35.3165;RPR=33;RUN=1;SAF=29;SAP=7.5342;SAR=19;SF=6;SRF=24;SRP=3.05462;SRR=25;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	0/1:-127.348,0,-130.748:97:49:48:1807:1841:49,48	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr9	108366734	.	G	A	3933.02	.	AB=0;ABP=0;AC=4;AF=1;AN=6;AO=192;CIGAR=1X;DP=645;DPB=196;DPRA=0;EPP=6.67466;EPPR=5.18177;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=42;NS=1;NUMALT=1;ODDS=230.74;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=7300;QR=154;RO=4;RPL=116;RPP=21.1059;RPPR=5.18177;RPR=76;RUN=1;SAF=73;SAP=26.9417;SAR=119;SF=0,5,10;SRF=2;SRP=3.0103;SRR=2;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	1/1:-616.097,-45.3525,0:196:4:192:7300:154:4,192	.	.	.	.	0/1:-369.93,0,-330.107:263:127:136:5204:4725:127,136	.	.	.	.	0/1:-218.907,0,-273.771:186:100:84:3179:3808:100,84	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr9	108370092	.	G	T	99.84	.	AB=0.359551;ABP=18.2594;AC=1;AF=0.5;AN=2;AO=32;CIGAR=1X;DP=89;DPB=89;DPRA=0;EPP=4.09604;EPPR=78.0812;GTI=0;LEN=1;MEANALT=2;MQM=37.9062;MQMR=39.9464;NS=1;NUMALT=1;ODDS=22.9883;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=590;QR=1937;RO=56;RPL=18;RPP=4.09604;RPPR=25.3454;RPR=14;RUN=1;SAF=32;SAP=72.4974;SAR=0;SF=24;SRF=14;SRP=33.4109;SRR=42;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-25.0759,0,-134.961:89:56:32:590:1937:56,32	.	.	.	.	.	.	.	.	.	.	.	.
+chr9	108380352	.	G	A	1282.31	.	AB=0.495238;ABP=3.03098;AC=1;AF=0.5;AN=2;AO=52;CIGAR=1X;DP=105;DPB=105;DPRA=0;EPP=40.5935;EPPR=40.5935;GTI=0;LEN=1;MEANALT=2;MQM=42;MQMR=42;NS=1;NUMALT=1;ODDS=295.262;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1961;QR=1960;RO=52;RPL=27;RPP=3.17734;RPPR=3.17734;RPR=25;RUN=1;SAF=22;SAP=5.68288;SAR=30;SF=9;SRF=28;SRP=3.67845;SRR=24;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	0/1:-138.407,0,-138.642:105:52:52:1961:1960:52,52	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr9	108380355	.	C	A	2010.56	.	AB=0;ABP=0;AC=4;AF=1;AN=6;AO=105;CIGAR=1X;DP=346;DPB=105;DPRA=0;EPP=65.5694;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=41.4667;MQMR=0;NS=1;NUMALT=1;ODDS=150.166;PAIRED=0.971429;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=3883;QR=0;RO=0;RPL=52;RPP=3.03098;RPPR=0;RPR=53;RUN=1;SAF=57;SAP=4.68544;SAR=48;SF=0,5,10;SRF=0;SRP=0;SRR=0;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	1/1:-334.829,-31.6082,0:105:0:105:3883:0:0,105	.	.	.	.	0/1:-145.191,0,-214.105:136:79:57:2163:2957:79,57	.	.	.	.	0/1:-155.002,0,-123.439:105:48:57:2154:1795:48,57	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr9	131709581	.	ATA	ATTA	3241.96	.	AB=0.462069;ABP=6.63441;AC=1;AF=0.5;AN=2;AO=134;CIGAR=1M1I2M;DP=290;DPB=335;DPRA=0;EPP=3.59368;EPPR=3.24192;GTI=0;LEN=1;MEANALT=3;MQM=41.9403;MQMR=41.9867;NS=1;NUMALT=1;ODDS=746.489;PAIRED=1;PAIREDR=1;PAO=1;PQA=38;PQR=0;PRO=0;QA=4895;QR=5489;RO=150;RPL=105;RPP=96.6105;RPPR=51.7092;RPR=29;RUN=1;SAF=59;SAP=7.15878;SAR=75;SF=5;SRF=65;SRP=8.80089;SRR=85;TYPE=ins	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	0/1:-341.531,0,-390.506:290:150:134:4895:5489:150,134	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chrX	31224684	.	A	G	2426.10	.	AB=0;ABP=0;AC=64;AF=1;AN=66;AO=99;CIGAR=1X;DP=2748;DPB=100;DPRA=0;EPP=4.78696;EPPR=0;GTI=0;LEN=1;MEANALT=2;MQM=41.798;MQMR=0;NS=1;NUMALT=1;ODDS=141.848;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=3663;QR=0;RO=0;RPL=25;RPP=55.674;RPPR=0;RPR=74;RUN=1;SAF=67;SAP=29.8795;SAR=32;SF=0,1,2,3,4,5,6,7,8,9,10,11,12,13,14,15,16,17,18,19,21,22,23,24,25,26,27,28,29,31,32,33,34;SRF=0;SRP=0;SRR=0;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	1/1:-316.063,-29.802,0:100:0:99:3663:0:0,99	1/1:-108.94,-10.5361,0:35:0:35:1249:0	1/1:-244.552,-23.1793,0:77:0:77:2824:0	1/1:-213.503,-19.868,0:66:0:66:2464:0:0,66	1/1:-486.574,-45.4555,0:151:0:151:5652:0	1/1:-398.149,-36.2311,0:126:1:125:4635:17:1,125	1/1:-241.713,-22.5773,0:75:0:75:2790:0:0,75	1/1:-281.818,-27.3937,0:91:0:91:3293:0	1/1:-175.182,-16.5567,0:55:0:55:2016:0	1/1:-380.408,-35.5215,0:119:0:118:4395:0:0,118	1/1:-280.569,-25.7948,0:91:1:90:3245:16:1,90	1/1:-279.54,-26.7917,0:89:0:89:3250:0	1/1:-595.207,-55.3895,0:184:0:184:6876:0:0,184	1/1:-311.609,-29.802,0:99:0:99:3592:0	1/1:-171.715,-13.2032,0:56:1:55:2020:38	1/1:-165.541,-15.3525,0:51:0:51:1908:0	1/1:-159.139,-15.0515,0:50:0:50:1831:0:0,50	0/1:-195.777,0,-225.528:158:83:75:2810:3158	0/1:-109.878,0,-84.3536:74:33:41:1521:1232	1/1:-149.558,-14.1484,0:47:0:47:1720:0	.	1/1:-185.316,-18.0618,0:60:0:60:2128:0:0,60	1/1:-94.7354,-9.0309,0:30:0:30:1087:0	1/1:-439.338,-40.9401,0:136:0:136:5072:0	1/1:-134.855,-12.3422,0:41:0:41:1556:0:0,41	1/1:-325.031,-31.0061,0:103:0:103:3759:0:0,103	1/1:-245.245,-23.1793,0:77:0:77:2822:0	1/1:-343.55,-33.1133,0:110:0:110:3982:0:0,110	1/1:-180.566,-17.4597,0:58:0:58:2087:0	1/1:-329.725,-31.3071,0:105:0:104:3823:0	.	1/1:-166.547,-15.9546,0:53:0:53:1915:0	1/1:-242.556,-22.8783,0:76:0:76:2796:0	1/1:-171.588,-16.2556,0:54:0:54:1979:0	1/1:-161.014,-15.3525,0:51:0:51:1853:0	.	.
+chrX	31496350	.	C	T	8269.58	.	AB=0;ABP=0;AC=65;AF=1;AN=66;AO=389;CIGAR=1X;DP=8877;DPB=391;DPRA=0;EPP=110.864;EPPR=5.18177;GTI=0;LEN=1;MEANALT=2;MQM=41.9846;MQMR=40;NS=1;NUMALT=1;ODDS=538.715;PAIRED=0.997429;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=14688;QR=13;RO=1;RPL=160;RPP=29.5871;RPPR=5.18177;RPR=229;RUN=1;SAF=189;SAP=3.68575;SAR=200;SF=0,1,2,4,5,6,7,8,9,10,12,13,14,15,16,17,18,19,20,21,22,23,24,26,28,29,30,31,32,33,34,35,36;SRF=0;SRP=5.18177;SRR=1;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	1/1:-1266.73,-116.247,0:391:1:389:14688:13:1,389	1/1:-262.67,-24.6845,0:82:0:82:3040:0	1/1:-767.527,-72.5482,0:242:0:241:8928:0	.	1/1:-1535.43,-143.29,0:476:0:476:17809:0	1/1:-1704.09,-157.439,0:527:0:523:19816:0:0,523	1/1:-1006.87,-93.6203,0:311:0:311:11673:0:0,311	1/1:-890.458,-84.2884,0:281:0:280:10318:0	1/1:-561.993,-52.9813,0:177:0:176:6554:0	1/1:-1077.75,-101.447,0:337:0:337:12483:0:0,337	0/1:-412.477,0,-516.905:359:195:163:6017:7261:195,163	.	1/1:-2077.32,-192.659,0:640:0:640:24108:0:0,640	1/1:-900.712,-84.8385,0:289:1:285:10435:14	1/1:-601.166,-55.9916,0:186:0:186:6964:0	1/1:-713.092,-64.8787,0:227:2:225:8309:52	1/1:-723.71,-67.4307,0:224:0:224:8399:0:0,224	1/1:-1524.07,-142.387,0:474:0:473:17685:0	1/1:-870.688,-80.676,0:268:0:268:10082:0	1/1:-646.135,-59.905,0:199:0:199:7482:0	1/1:-796.291,-73.9071,0:250:1:249:9348:14:1,249	1/1:-524.242,-49.67,0:166:0:165:6074:0:0,165	1/1:-382.445,-36.1236,0:120:0:120:4418:0	1/1:-1654.26,-152.622,0:508:0:507:19172:0	1/1:-317.741,-29.802,0:99:0:99:3673:0:0,99	.	1/1:-873.128,-79.0999,0:291:3:287:10227:93	.	1/1:-469.593,-44.5524,0:148:0:148:5441:0	1/1:-1038.9,-99.942,0:332:0:332:12015:0	1/1:-530.395,-49.3689,0:164:0:164:6135:0	1/1:-530.995,-49.67,0:165:0:165:6139:0	1/1:-707.77,-65.9256,0:219:0:219:8262:0	1/1:-513.391,-47.8638,0:159:0:159:5971:0	1/1:-643.084,-59.905,0:201:0:199:7460:0	1/1:-263.349,-24.3834,0:81:0:81:3045:0	1/1:-885.84,-78.2192,0:284:2:280:10370:76
+chrX	31496426	.	T	C	3965.23	.	AB=0;ABP=0;AC=2;AF=1;AN=2;AO=130;CIGAR=1X;DP=132;DPB=132;DPRA=0;EPP=14.302;EPPR=3.0103;GTI=0;LEN=1;MEANALT=1;MQM=41.8769;MQMR=42;NS=1;NUMALT=1;ODDS=165.013;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=4828;QR=78;RO=2;RPL=105;RPP=109.914;RPPR=7.35324;RPR=25;RUN=1;SAF=63;SAP=3.27756;SAR=67;SF=14;SRF=1;SRP=3.0103;SRR=1;TYPE=snp	GT:GL:DP:RO:AO:QA:QR	.	.	.	.	.	.	.	.	.	.	.	.	.	.	1/1:-411.332,-32.6612,0:132:2:130:4828:78	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chrX	31496431	.	T	A	3263.42	.	AB=0;ABP=0;AC=2;AF=1;AN=2;AO=110;CIGAR=1X;DP=112;DPB=112;DPRA=0;EPP=8.06391;EPPR=3.0103;GTI=0;LEN=1;MEANALT=1;MQM=41.8909;MQMR=42;NS=1;NUMALT=1;ODDS=137.617;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=3969;QR=78;RO=2;RPL=89;RPP=94.2911;RPPR=7.35324;RPR=21;RUN=1;SAF=56;SAP=3.08926;SAR=54;SF=14;SRF=1;SRP=3.0103;SRR=1;TYPE=snp	GT:GL:DP:RO:AO:QA:QR	.	.	.	.	.	.	.	.	.	.	.	.	.	.	1/1:-338.726,-26.6406,0:112:2:110:3969:78	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chrX	31676096	.	G	A	1309.33	.	AB=0.53125;ABP=3.55317;AC=25;AF=0.5;AN=30;AO=34;CIGAR=1X;DP=826;DPB=64;DPRA=0;EPP=3.0103;EPPR=5.61607;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=42;NS=1;NUMALT=1;ODDS=166.092;PAIRED=0.970588;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1292;QR=1148;RO=30;RPL=4;RPP=46.1843;RPPR=17.1973;RPR=30;RUN=1;SAF=21;SAP=7.09778;SAR=13;SF=0,1,4,5,6,7,9,10,12,13,17,18,26,30,36;SRF=20;SRP=10.2485;SRR=10;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	0/1:-92.4758,0,-80.0998:64:30:34:1292:1148:30,34	1/1:-19.9618,-1.80618,0:6:0:6:227:0	.	.	0/1:-91.3807,0,-94.0532:72:35:37:1313:1337	1/1:-201.383,-18.9649,0:63:0:63:2324:0:0,63	0/1:-55.9802,0,-67.7504:48:26:22:810:947:26,22	1/1:-163.216,-15.6536,0:52:0:52:1906:0	.	0/1:-58.8523,0,-90.6083:58:34:24:878:1244:34,24	0/1:-78.1259,0,-59.7866:52:23:29:1079:869:23,29	.	1/1:-276.725,-25.8886,0:87:0:86:3201:0:0,86	1/1:-237.319,-21.9752,0:73:0:73:2754:0	.	.	.	1/1:-243.158,-19.4557,0:77:1:76:2856:39	1/1:-169.151,-15.6536,0:52:0:52:1955:0	.	.	.	.	.	.	.	1/1:-160.144,-15.3525,0:51:0:51:1841:0	.	.	.	1/1:-124.514,-11.4391,0:38:0:38:1436:0	.	.	.	.	.	1/1:-107.317,-9.93399,0:33:0:33:1239:0
+chrX	31697636	.	A	G	3952.64	.	AB=0.413534;ABP=20.2841;AC=9;AF=0.5;AN=12;AO=110;CIGAR=1X;DP=1205;DPB=266;DPRA=0;EPP=3.32615;EPPR=3.0103;GTI=0;LEN=1;MEANALT=1;MQM=41.9636;MQMR=42;NS=1;NUMALT=1;ODDS=607.454;PAIRED=0.990909;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=4088;QR=5917;RO=156;RPL=62;RPP=6.87947;RPPR=3.51141;RPR=48;RUN=1;SAF=65;SAP=10.9066;SAR=45;SF=0,2,6,10,24,25;SRF=95;SRP=19.1015;SRR=61;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	0/1:-273.416,0,-430.577:266:156:110:4088:5917:156,110	.	1/1:-459.878,-42.7463,0:142:0:142:5348:0	.	.	.	0/1:-376.854,0,-301.295:253:115:138:5272:4371:115,138	.	.	.	0/1:-356.448,0,-282.77:244:109:134:4968:4133:109,134	.	.	.	.	.	.	.	.	.	.	.	.	.	1/1:-235.517,-21.9752,0:73:0:73:2723:0:0,73	1/1:-721.147,-68.3338,0:227:0:227:8399:0:0,227	.	.	.	.	.	.	.	.	.	.	.
+chrX	31893307	.	T	G	1962.36	.	AB=0.414815;ABP=11.5193;AC=19;AF=0.5;AN=24;AO=56;CIGAR=1X;DP=1091;DPB=135;DPRA=0;EPP=18.5208;EPPR=44.818;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=41.9494;NS=1;NUMALT=1;ODDS=303.413;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2099;QR=2947;RO=79;RPL=31;RPP=4.40625;RPPR=3.69747;RPR=25;RUN=1;SAF=21;SAP=10.6105;SAR=35;SF=0,4,6,7,9,10,13,15,19,21,22,26;SRF=37;SRP=3.69747;SRR=42;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	0/1:-141.154,0,-214.354:135:79:56:2099:2947:79,56	.	.	.	0/1:-167.271,0,-179.649:130:67:63:2388:2525	.	0/1:-139.373,0,-85.8537:90:37:53:1919:1298:37,53	1/1:-259.111,-24.0824,0:80:0:80:3000:0	.	0/1:-79.1124,0,-182.181:101:66:35:1261:2468:66,35	1/1:-311.186,-29.1999,0:97:0:97:3595:0:0,97	.	.	1/1:-281.317,-26.1896,0:87:0:87:3251:0	.	1/1:-200.65,-18.6639,0:62:0:62:2314:0	.	.	.	1/1:-212.783,-19.522,0:70:1:68:2470:14	.	0/1:-120.686,0,-63.6471:70:26:44:1631:978:26,44	1/1:-215.087,-19.868,0:66:0:66:2479:0	.	.	.	1/1:-320.546,-31.0061,0:103:0:103:3720:0	.	.	.	.	.	.	.	.	.	.
+chrX	31986499	.	G	A	2354.20	.	AB=0;ABP=0;AC=2;AF=1;AN=2;AO=74;CIGAR=1X;DP=74;DPB=74;DPRA=0;EPP=26.0162;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=0;NS=1;NUMALT=1;ODDS=107.191;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=2806;QR=0;RO=0;RPL=24;RPP=22.847;RPPR=0;RPR=50;RUN=1;SAF=37;SAP=3.0103;SAR=37;SF=36;SRF=0;SRP=0;SRR=0;TYPE=snp	GT:GL:DP:RO:AO:QA:QR	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	1/1:-242.847,-22.2762,0:74:0:74:2806:0
+chrX	32380996	.	C	T	4266.84	.	AB=0.46332;ABP=6.03695;AC=25;AF=0.5;AN=30;AO=120;CIGAR=1X;DP=2839;DPB=259;DPRA=0;EPP=3.66174;EPPR=4.90057;GTI=0;LEN=1;MEANALT=1;MQM=41.9833;MQMR=41.741;NS=1;NUMALT=1;ODDS=675.259;PAIRED=0.991667;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=4382;QR=5051;RO=139;RPL=75;RPP=19.2963;RPPR=12.7741;RPR=45;RUN=1;SAF=52;SAP=7.64277;SAR=68;SF=0,1,2,4,6,9,12,13,16,17,18,21,25,30,32;SRF=65;SRP=4.27569;SRR=74;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	0/1:-302.441,0,-359.463:259:139:120:4382:5051:139,120	1/1:-143.727,-13.2453,0:44:0:44:1662:0	1/1:-554.234,-54.1854,0:180:0:180:6437:0	.	1/1:-660.814,-62.6142,0:208:0:208:7636:0	.	1/1:-603.642,-55.9916,0:186:0:186:6979:0:0,186	.	.	0/1:-278.883,0,-271.305:214:107:107:3995:3852:107,107	.	.	0/1:-542.03,0,-521.405:414:205:209:7705:7430:205,209	1/1:-455.018,-43.0473,0:143:0:143:5256:0	.	.	1/1:-479.206,-44.5524,0:148:0:148:5533:0:0,148	0/1:-361.093,0,-460.708:320:176:142:5282:6394	1/1:-575.108,-50.6827,0:180:1:179:6736:36	.	.	0/1:-193.467,0,-88.3379:112:39:72:2616:1395:39,72	.	.	.	1/1:-679.631,-64.1194,0:213:0:213:7848:0:0,213	.	.	.	.	1/1:-396.995,-37.0267,0:123:0:123:4591:0	.	1/1:-305.938,-28.5979,0:95:0:95:3535:0	.	.	.	.
+chrX	32408311	.	T	C	1776.63	.	AB=0;ABP=0;AC=7;AF=1;AN=10;AO=40;CIGAR=1X;DP=501;DPB=40;DPRA=0;EPP=39.7082;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=41.525;MQMR=0;NS=1;NUMALT=1;ODDS=60.0569;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1518;QR=0;RO=0;RPL=24;RPP=6.48466;RPPR=0;RPR=16;RUN=1;SAF=19;SAP=3.22745;SAR=21;SF=1,2,6,9,21;SRF=0;SRP=0;SRR=0;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	1/1:-131.137,-12.0412,0:40:0:40:1518:0	1/1:-422.294,-37.8656,0:136:2:134:4915:33	.	.	.	0/1:-175.528,0,-154.521:126:60:66:2465:2223:60,66	.	.	0/1:-144.308,0,-161.01:120:61:59:2095:2277:61,59	.	.	.	.	.	.	.	.	.	.	.	0/1:-64.6482,0,-139.169:79:51:28:1019:1895:51,28	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chrX	32456458	.	C	T	865.24	.	AB=0;ABP=0;AC=2;AF=1;AN=2;AO=27;CIGAR=1X;DP=27;DPB=27;DPRA=0;EPP=3.09072;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=0;NS=1;NUMALT=1;ODDS=42.0351;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1034;QR=0;RO=0;RPL=16;RPP=5.02092;RPPR=0;RPR=11;RUN=1;SAF=10;SAP=6.95112;SAR=17;SF=19;SRF=0;SRP=0;SRR=0;TYPE=snp	GT:GL:DP:RO:AO:QA:QR	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	1/1:-89.5634,-8.12781,0:27:0:27:1034:0	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chrX	32459449	.	A	G	665.82	.	AB=0;ABP=0;AC=2;AF=1;AN=2;AO=22;CIGAR=1X;DP=22;DPB=22;DPRA=0;EPP=34.9902;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=0;NS=1;NUMALT=1;ODDS=35.1036;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=836;QR=0;RO=0;RPL=11;RPP=3.0103;RPPR=0;RPR=11;RUN=1;SAF=9;SAP=4.58955;SAR=13;SF=15;SRF=0;SRP=0;SRR=0;TYPE=snp	GT:GL:DP:RO:AO:QA:QR	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	1/1:-72.5413,-6.62266,0:22:0:22:836:0	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chrX	32472763	.	CTTTTTTTTTTTTTACCTTCA	CTTTTTTTTTTTTTTACCTTCA,CTTTTTTTTTTTTACCTTCA	221.89	.	AB=0.404762;ABP=6.31921;AC=21,5;AF=0.5;AN=50;AO=17;CIGAR=1M1I20M;DP=763;DPB=42.8095;DPRA=0;EPP=18.4661;EPPR=16.9077;GTI=0;LEN=1;MEANALT=14;MQM=42;MQMR=42;NS=1;NUMALT=1;ODDS=38.3335;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=597;QR=361;RO=10;RPL=10;RPP=4.1599;RPPR=3.87889;RPR=7;RUN=1;SAF=13;SAP=13.3567;SAR=4;SF=0,1,2,3,5,6,8,9,10,13,15,16,17,18,21,22,24,25,26,28,29,30,31,33,34;SRF=7;SRP=6.48466;SRR=3;TYPE=ins	GT:GL:DP:RO:AO:QA:QR:AD	0/1:-43.5837,0,-23.4792,.,.,.:42:10:17,.:597,.:361:10,17	0/1:.,.,-10.0653,.,.,.:10:4:5,.:134,.:144	0/1:.,.,-5.58565,.,.,.:15:3:8,.:283,.:112	0/2:-11.9144,.,.,0,.,-18.3067:19:7:.,6:.,183:254:7,6	.	0/1:-30.7028,0,-20.5991,.,.,.:30:9:14,.:431,.:313:9,14	0/1:-32.4865,0,-4.09101,.,.,.:17:3:12,.:425,.:96:3,12	.	0/1:.,.,-15.6773,.,.,.:27:7:16,.:531,.:260	0/1:-12.5516,0,-30.7749,.,.,.:30:12:6,.:208,.:411:12,6	0/1:-45.8558,0,-46.4578,.,.,.:64:19:22,.:671,.:670:19,22	.	.	0/1:.,.,-17.7288,.,.,.:51:9:28,.:800,.:331	.	0/2:.,.,.,.,.,-28.1313:26:11:.,12:.,404:405	0/2:-10.6139,.,.,0,.,-36.4438:25:14:.,5:.,188:479:14,5	0/1:.,.,-33.5106,.,.,.:49:15:24,.:860,.:546	0/1:.,.,-43.6878,.,.,.:29:16:7,.:219,.:587	.	.	0/2:-9.85948,.,.,0,.,-37.1666:38:14:.,6:.,183:491:14,6	0/2:.,.,.,.,.,-57.2038:34:21:.,9:.,238:756	.	1/1:-19.0616,-2.10721,0,.,.,.:11:0:7,.:219,.:0:0,7	0/1:-65.5897,0,-18.7637,.,.,.:61:10:28,.:887,.:352:10,28	0/1:.,.,-8.5043,.,.,.:26:5:13,.:441,.:188	.	0/1:.,.,-14.1039,.,.,.:34:8:21,.:605,.:293	0/1:.,.,-14.6996,.,.,.:50:9:26,.:848,.:322	0/1:.,.,-20.9676,.,.,.:20:8:4,.:155,.:280	0/1:.,.,-17.5779,.,.,.:33:8:18,.:594,.:299	.	0/1:.,.,-1.27349,.,.,.:7:1:6,.:179,.:35	0/1:.,.,-5.51616,.,.,.:15:3:11,.:377,.:112	.	.
+chrX	32486756	.	C	T	2997.50	.	AB=0.428571;ABP=9.52472;AC=4;AF=0.5;AN=6;AO=63;CIGAR=1X;DP=551;DPB=147;DPRA=0;EPP=12.9715;EPPR=13.3506;GTI=0;LEN=1;MEANALT=1;MQM=41.9365;MQMR=41.9762;NS=1;NUMALT=1;ODDS=345.65;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2408;QR=3129;RO=84;RPL=49;RPP=45.2334;RPPR=102.381;RPR=14;RUN=1;SAF=21;SAP=18.2106;SAR=42;SF=9,11,23;SRF=29;SRP=20.4855;SRR=55;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	0/1:-163.853,0,-226.544:147:84:63:2408:3129:84,63	.	1/1:-573.376,-48.096,0:187:3:184:6763:90	.	.	.	.	.	.	.	.	.	.	.	0/1:-232.328,0,-342.908:217:127:90:3446:4720	.	.	.	.	.	.	.	.	.	.	.	.	.
+chrX	32503194	.	T	C	4303.42	.	AB=0;ABP=0;AC=34;AF=1;AN=40;AO=245;CIGAR=1X;DP=3598;DPB=246;DPRA=0;EPP=4.08274;EPPR=0;GTI=0;LEN=1;MEANALT=2;MQM=41.9918;MQMR=0;NS=1;NUMALT=1;ODDS=344.247;PAIRED=0.995918;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=9156;QR=0;RO=0;RPL=175;RPP=100.727;RPPR=0;RPR=70;RUN=1;SAF=99;SAP=22.589;SAR=146;SF=0,1,2,4,5,6,9,10,12,13,16,17,18,21,24,25,29,30,32,34;SRF=0;SRP=0;SRR=0;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	1/1:-791.483,-73.7524,0:246:0:245:9156:0:0,245	1/1:-164.921,-15.0515,0:50:0:50:1906:0	1/1:-310.266,-29.5009,0:99:0:98:3596:0	.	1/1:-685.696,-64.7215,0:215:0:215:7942:0	0/1:-347.186,0,-302.221:249:115:134:4891:4368:115,134	1/1:-533.767,-49.971,0:166:0:166:6169:0:0,166	.	.	0/1:-323.106,0,-231.467:213:92:121:4473:3428:92,121	0/1:-324.602,0,-338.677:253:128:124:4628:4820:128,124	.	1/1:-1244.76,-115.055,0:388:1:386:14419:16:1,386	1/1:-508.723,-47.1679,0:162:1:161:5897:16	.	.	1/1:-373.502,-32.099,0:119:1:118:4371:39:1,118	0/1:-328.519,0,-520.766:325:190:135:4924:7165	0/1:-190.576,0,-162.712:137:64:73:2674:2353	.	.	0/1:-71.2648,0,-233.535:121:86:35:1239:3112:86,35	.	.	1/1:-198.094,-18.6639,0:62:0:62:2284:0:0,62	1/1:-775.506,-72.7555,0:247:1:246:9016:16:1,246	.	.	.	1/1:-601.721,-60.206,0:200:0:200:6993:0	1/1:-388.85,-36.1236,0:120:0:120:4497:0	.	1/1:-347.774,-32.2102,0:107:0:107:4021:0	.	1/1:-373.918,-32.8794,0:119:2:117:4357:31	.	.
+chrX	32563263	.	A	G	1390.97	.	AB=0.403226;ABP=8.05372;AC=25;AF=0.5;AN=30;AO=25;CIGAR=1X;DP=980;DPB=62;DPRA=0;EPP=7.26639;EPPR=24.1968;GTI=0;LEN=1;MEANALT=1;MQM=40.56;MQMR=42;NS=1;NUMALT=1;ODDS=118.057;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=909;QR=1390;RO=37;RPL=6;RPP=17.6895;RPPR=12.9286;RPR=19;RUN=1;SAF=15;SAP=5.18177;SAR=10;SF=9,12,15,17,18,19,21,22,23,26,28,29,30,31,33;SRF=21;SRP=4.47751;SRR=16;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	0/1:-59.2714,0,-101.709:62:37:25:909:1390:37,25	.	.	0/1:-235.139,0,-217.644:173:84:89:3338:3131:84,89	.	.	1/1:-166.445,-15.6536,0:52:0:52:1923:0	.	0/1:-133.73,0,-127.71:100:48:52:1892:1823	1/1:-206.471,-19.567,0:66:0:65:2381:0	1/1:-143.401,-13.2453,0:44:0:44:1668:0	.	0/1:-43.8758,0,-70.3931:46:27:19:663:972:27,19	1/1:-110.307,-10.5361,0:35:0:35:1271:0	0/1:-184.755,0,-100.651:108:41:67:2511:1541	.	.	1/1:-195.385,-18.6639,0:62:0:62:2250:0	.	1/1:-131.065,-12.3422,0:41:0:41:1513:0	1/1:-289.516,-27.6948,0:94:0:92:3356:0	1/1:-83.5742,-7.52575,0:25:0:25:966:0	1/1:-82.2568,-7.82678,0:26:0:26:947:0	.	1/1:-151.366,-13.8474,0:46:0:46:1746:0	.	.	.
+chrX	32591811	.	A	G	1837.57	.	AB=0.529851;ABP=4.04742;AC=14;AF=0.5;AN=18;AO=71;CIGAR=1X;DP=870;DPB=134;DPRA=0;EPP=9.89173;EPPR=10.7656;GTI=0;LEN=1;MEANALT=1;MQM=41.7465;MQMR=41.6984;NS=1;NUMALT=1;ODDS=340.398;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2679;QR=2274;RO=63;RPL=34;RPP=3.28556;RPPR=3.04477;RPR=37;RUN=1;SAF=30;SAP=6.71098;SAR=41;SF=5,8,10,12,17,21,31,34,35;SRF=25;SRP=8.83536;SRR=38;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	0/1:-190.291,0,-155.448:134:63:71:2679:2274:63,71	.	.	1/1:-188.022,-17.1587,0:57:0:57:2174:0	.	1/1:-362.282,-33.4143,0:111:0:111:4187:0:0,111	.	0/1:-205.147,0,-254.045:177:96:81:3038:3557:96,81	.	.	.	.	0/1:-211.36,0,-195.057:153:74:79:2974:2801	.	.	.	0/1:-34.1864,0,-151.173:72:54:18:642:1992:54,18	.	.	.	.	.	.	.	.	.	1/1:-172.345,-10.8217,0:59:2:57:2063:76	.	.	1/1:-199.945,-18.6639,0:62:0:62:2320:0	1/1:-141.566,-13.5464,0:45:0:45:1631:0	.
+chrX	32591931	.	T	C	2918.73	.	AB=0.578723;ABP=15.6603;AC=14;AF=0.5;AN=18;AO=136;CIGAR=1X;DP=1337;DPB=235;DPRA=0;EPP=5.30951;EPPR=7.94546;GTI=0;LEN=1;MEANALT=1;MQM=41.9853;MQMR=41.8182;NS=1;NUMALT=1;ODDS=541.717;PAIRED=0.992647;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=4964;QR=3634;RO=99;RPL=67;RPP=3.07417;RPPR=3.03223;RPR=69;RUN=1;SAF=65;SAP=3.5851;SAR=71;SF=5,8,10,12,17,21,31,34,35;SRF=44;SRP=5.66432;SRR=55;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	0/1:-359.476,0,-243.86:235:99:136:4964:3634:99,136	.	.	1/1:-185.165,-17.7608,0:59:0:59:2144:0	.	1/1:-610.653,-56.8947,0:189:0:189:7057:0:0,189	.	0/1:-372.111,0,-309.022:261:121:140:5204:4473:121,140	.	.	.	.	0/1:-365.814,0,-293.291:256:118:138:5118:4296	.	.	.	0/1:-58.6749,0,-214.305:107:78:29:1046:2839:78,29	.	.	.	.	.	.	.	.	.	1/1:-283.917,-27.3937,0:91:0:91:3272:0	.	.	1/1:-247.785,-22.8783,0:76:0:76:2860:0	1/1:-202.084,-18.9649,0:63:0:63:2325:0	.
+chrX	32613880	.	T	A	1077.02	.	AB=0;ABP=0;AC=2;AF=1;AN=2;AO=35;CIGAR=1X;DP=35;DPB=35;DPRA=0;EPP=4.56135;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=0;NS=1;NUMALT=1;ODDS=53.1255;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1280;QR=0;RO=0;RPL=23;RPP=10.5174;RPPR=0;RPR=12;RUN=1;SAF=18;SAP=3.07234;SAR=17;SF=33;SRF=0;SRP=0;SRR=0;TYPE=snp	GT:GL:DP:RO:AO:QA:QR	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	1/1:-111.22,-10.5361,0:35:0:35:1280:0	.	.	.
+chrX	32632565	.	T	C	2479.91	.	AB=0;ABP=0;AC=2;AF=1;AN=2;AO=82;CIGAR=1X;DP=83;DPB=83;DPRA=0;EPP=8.20065;EPPR=5.18177;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=42;NS=1;NUMALT=1;ODDS=113.187;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2968;QR=18;RO=1;RPL=57;RPP=30.1272;RPPR=5.18177;RPR=25;RUN=1;SAF=25;SAP=30.1272;SAR=57;SF=13;SRF=0;SRP=5.18177;SRR=1;TYPE=snp	GT:GL:DP:RO:AO:QA:QR	.	.	.	.	.	.	.	.	.	.	.	.	.	1/1:-256.271,-23.1872,0:83:1:82:2968:18	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chrX	32867945	.	TAAAAAAAATACACT	TAAAAAAAAATACACT	1917.88	.	AB=0.537975;ABP=4.98936;AC=8;AF=0.5;AN=12;AO=85;CIGAR=1M1I14M;DP=712;DPB=163.867;DPRA=0;EPP=24.4951;EPPR=34.7758;GTI=0;LEN=1;MEANALT=3;MQM=42;MQMR=42;NS=1;NUMALT=1;ODDS=380.368;PAIRED=1;PAIREDR=1;PAO=0.5;PQA=19.5;PQR=19.5;PRO=0.5;QA=3209;QR=2572;RO=70;RPL=42;RPP=3.03585;RPPR=15.4187;RPR=43;RUN=1;SAF=52;SAP=12.2327;SAR=33;SF=0,9,12,16,18,35;SRF=40;SRP=6.1124;SRR=30;TYPE=ins	GT:GL:DP:RO:AO:QA:QR:AD	0/1:-230.277,0,-176.56:158:70:85:3209:2572:70,85	.	.	.	.	.	.	.	.	0/1:-129.664,0,-159.295:116:60:52:1893:2234:60,52	.	.	0/1:-278.47,0,-229.743:207:90:105:3892:3319:90,105	.	.	.	1/1:-224.739,-15.931,0:76:2:73:2671:75:2,73	.	0/1:.,.,-84.1784:89:34:50:1825:1259	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	1/1:.,.,0:66:0:64:2380:0	.
+chrX	100653950	.	T	C	1764.31	.	AB=0.429752;ABP=8.19671;AC=12;AF=0.5;AN=14;AO=52;CIGAR=1X;DP=570;DPB=121;DPRA=0;EPP=7.18621;EPPR=4.55236;GTI=0;LEN=1;MEANALT=1;MQM=40.9231;MQMR=41.971;NS=1;NUMALT=1;ODDS=260.333;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1855;QR=2588;RO=69;RPL=35;RPP=16.5402;RPPR=46.0936;RPR=17;RUN=1;SAF=14;SAP=27.0635;SAR=38;SF=5,13,19,20,23,28,31;SRF=15;SRP=50.8771;SRR=54;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	0/1:-123.806,0,-187.745:121:69:52:1855:2588:69,52	.	.	.	.	.	.	.	1/1:-293.532,-29.1999,0:97:0:97:3366:0	.	.	.	.	.	1/1:-189.541,-18.0618,0:60:0:60:2177:0	1/1:-211.115,-19.868,0:66:0:66:2431:0:0,66	.	.	0/1:-146.935,0,-143.115:111:55:56:2073:2043	.	.	.	.	1/1:-166.831,-16.8577,0:56:0:56:1923:0	.	.	1/1:-176.439,-15.7635,0:59:1:58:2043:20	.	.	.	.	.
+chrX	100662901	.	G	A	5381.56	.	AB=0.436019;ABP=18.0151;AC=10;AF=0.5;AN=12;AO=184;CIGAR=1X;DP=1591;DPB=422;DPRA=0;EPP=3.0103;EPPR=3.59423;GTI=0;LEN=1;MEANALT=1;MQM=41.6957;MQMR=41.8109;NS=1;NUMALT=1;ODDS=1022.72;PAIRED=0.994565;PAIREDR=0.995798;PAO=0;PQA=0;PQR=0;PRO=0;QA=6697;QR=8483;RO=238;RPL=94;RPP=3.19912;RPPR=5.96642;RPR=90;RUN=1;SAF=94;SAP=3.19912;SAR=90;SF=5,19,20,23,28,31;SRF=125;SRP=4.32413;SRR=113;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	0/1:-452.804,0,-609.759:422:238:184:6697:8483:238,184	.	.	.	.	.	.	.	.	.	.	.	.	.	1/1:-621.891,-58.8067,0:200:1:199:7190:14	1/1:-690.501,-66.2266,0:220:0:220:8000:0:0,220	.	.	0/1:-664.382,0,-545.665:484:222:262:9336:7960	.	.	.	.	1/1:-466.631,-44.8535,0:149:0:149:5365:0	.	.	1/1:-368.964,-34.9195,0:116:0:116:4241:0	.	.	.	.	.
+chrX	100662903	.	C	T	6871.48	.	AB=0.472318;ABP=6.85734;AC=1;AF=0.5;AN=2;AO=273;CIGAR=1X;DP=578;DPB=578;DPRA=0;EPP=3.65458;EPPR=3.46745;GTI=0;LEN=1;MEANALT=2;MQM=41.7363;MQMR=41.9375;NS=1;NUMALT=1;ODDS=1582.22;PAIRED=0.996337;PAIREDR=0.996711;PAO=0;PQA=0;PQR=0;PRO=0;QA=10080;QR=11064;RO=304;RPL=127;RPP=5.88173;RPPR=3.03887;RPR=146;RUN=1;SAF=141;SAP=3.65458;SAR=132;SF=12;SRF=163;SRP=6.46751;SRR=141;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-695.353,0,-786.333:578:304:273:10080:11064:304,273	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chrX	108868153	.	G	A	1861.34	.	AB=0.384211;ABP=25.1365;AC=9;AF=0.5;AN=12;AO=73;CIGAR=1X;DP=1098;DPB=190;DPRA=0;EPP=11.607;EPPR=23.9875;GTI=0;LEN=1;MEANALT=2;MQM=36.6027;MQMR=38.7453;NS=1;NUMALT=1;ODDS=236.928;PAIRED=0.958904;PAIREDR=0.943396;PAO=0;PQA=0;PQR=0;PRO=0;QA=2030;QR=2876;RO=106;RPL=47;RPP=16.1284;RPPR=14.81;RPR=26;RUN=1;SAF=37;SAP=3.04005;SAR=36;SF=9,15,17,23,32,34;SRF=44;SRP=9.64763;SRR=62;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	0/1:-112.707,0,-192.72:190:106:73:2030:2876:106,73	.	.	.	.	.	1/1:-238.703,-17.2903,0:140:18:117:3135:264	.	0/1:-155.457,0,-284.531:251:143:100:2770:4257	.	.	.	.	.	0/1:-206.609,0,-311.191:286:160:124:3448:4626	.	.	.	.	.	.	.	.	1/1:-242.537,-20.7529,0:131:14:110:3176:194	.	1/1:-196.775,-19.2538,0:100:8:89:2537:112	.	.
+chrX	119573169	.	G	A	366.33	.	AB=0.346154;ABP=13.7006;AC=1;AF=0.5;AN=2;AO=18;CIGAR=1X;DP=52;DPB=52;DPRA=0;EPP=15.074;EPPR=32.0291;GTI=0;LEN=1;MEANALT=2;MQM=42;MQMR=41.9394;NS=1;NUMALT=1;ODDS=84.3497;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=691;QR=1234;RO=33;RPL=12;RPP=7.35324;RPPR=22.0271;RPR=6;RUN=1;SAF=8;SAP=3.49285;SAR=10;SF=18;SRF=19;SRP=4.65535;SRR=14;TYPE=snp	GT:GL:DP:RO:AO:QA:QR	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-44.3997,0,-91.5092:52:33:18:691:1234	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chrX	119576454	.	C	T	2816.72	.	AB=0.567708;ABP=10.6557;AC=1;AF=0.5;AN=2;AO=109;CIGAR=1X;DP=192;DPB=192;DPRA=0;EPP=4.62396;EPPR=8.89682;GTI=0;LEN=1;MEANALT=1;MQM=41.6881;MQMR=41.506;NS=1;NUMALT=1;ODDS=453.256;PAIRED=0.981651;PAIREDR=0.987952;PAO=0;PQA=0;PQR=0;PRO=0;QA=4079;QR=3122;RO=83;RPL=34;RPP=36.4988;RPPR=51.3844;RPR=75;RUN=1;SAF=60;SAP=5.42083;SAR=49;SF=17;SRF=47;SRP=6.17594;SRR=36;TYPE=snp	GT:GL:DP:RO:AO:QA:QR	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-292.828,0,-209.939:192:83:109:4079:3122	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chrX	119576455	.	G	A	2497.87	.	AB=0.495495;ABP=3.04943;AC=4;AF=0.5;AN=6;AO=110;CIGAR=1X;DP=503;DPB=222;DPRA=0;EPP=3.32615;EPPR=4.25114;GTI=0;LEN=1;MEANALT=1;MQM=41.4909;MQMR=41.8125;NS=1;NUMALT=1;ODDS=627.086;PAIRED=0.990909;PAIREDR=0.991071;PAO=0;PQA=0;PQR=0;PRO=0;QA=4119;QR=4117;RO=112;RPL=28;RPP=60.5741;RPPR=40.5458;RPR=82;RUN=1;SAF=69;SAP=18.487;SAR=41;SF=12,15,17;SRF=64;SRP=7.97367;SRR=48;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-286.511,0,-290.157:222:112:110:4119:4117:112,110	.	.	1/1:-287.48,-26.7917,0:89:0:89:3341:0	.	0/1:-209.849,0,-292.055:192:108:83:3118:4064	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chrX	119590533	.	T	A	539.58	.	AB=0.469388;ABP=3.40914;AC=30;AF=0.5;AN=36;AO=23;CIGAR=1X;DP=450;DPB=49;DPRA=0;EPP=30.2953;EPPR=36.4176;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=42;NS=1;NUMALT=1;ODDS=117.454;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=851;QR=915;RO=26;RPL=12;RPP=3.10471;RPPR=8.35546;RPR=11;RUN=1;SAF=11;SAP=3.10471;SAR=12;SF=0,1,4,6,7,11,12,13,15,16,17,20,21,22,23,32,34,36;SRF=12;SRP=3.34437;SRR=14;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	0/1:-59.2549,0,-65.0555:49:26:23:851:915:26,23	1/1:-36.3009,-3.31133,0:11:0:11:416:0	.	.	0/1:-44.8522,0,-56.961:38:21:17:647:785	.	0/1:-31.5351,0,-32.8174:26:13:13:451:464:13,13	1/1:-62.33,-5.71957,0:19:0:19:716:0	.	.	.	1/1:-102.741,-9.63296,0:32:0:32:1182:0	0/1:-48.9877,0,-70.5455:50:29:20:734:977:29,20	1/1:-96.6945,-9.0309,0:30:0:30:1113:0	.	1/1:-63.8037,-6.0206,0:20:0:20:731:0	1/1:-59.3893,-5.41854,0:18:0:18:683:0:0,18	1/1:-112.339,-10.5361,0:35:0:35:1296:0	.	.	1/1:-46.5864,-4.51545,0:15:0:15:533:0:0,15	0/1:-49.3876,0,-3.91688:20:3:17:634:110:3,17	1/1:-68.6177,-6.32163,0:21:0:21:787:0	0/1:-24.9385,0,-10.7644:14:5:9:332:169	.	.	.	.	.	.	.	.	1/1:-43.0065,-3.91339,0:13:0:13:494:0	.	1/1:-76.8143,-7.22472,0:24:0:24:883:0	.	1/1:-49.7672,-4.51545,0:15:0:15:572:0
+chrX	135279350	.	C	A	17.32	.	AB=0.25;ABP=9.52472;AC=1;AF=0.5;AN=2;AO=3;CIGAR=1X;DP=12;DPB=12;DPRA=0;EPP=9.52472;EPPR=3.25157;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=42;NS=1;NUMALT=1;ODDS=3.97014;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=116;QR=332;RO=9;RPL=2;RPP=3.73412;RPPR=9.04217;RPR=1;RUN=1;SAF=2;SAP=3.73412;SAR=1;SF=34;SRF=2;SRP=9.04217;SRR=7;TYPE=snp	GT:GL:DP:RO:AO:QA:QR	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-6.74918,0,-25.6083:12:9:3:116:332	.	.
+chrX	135292022	.	C	T	1684.55	.	AB=0.513514;ABP=3.18637;AC=27;AF=0.5;AN=34;AO=57;CIGAR=1X;DP=1498;DPB=111;DPRA=0;EPP=23.1631;EPPR=10.8919;GTI=0;LEN=1;MEANALT=1;MQM=41.5614;MQMR=42;NS=1;NUMALT=1;ODDS=290.859;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=2003;QR=1917;RO=54;RPL=22;RPP=9.44853;RPPR=3.0103;RPR=35;RUN=1;SAF=25;SAP=4.877;SAR=32;SF=0,2,3,4,5,6,10,11,16,17,18,19,23,27,30,35,36;SRF=29;SRP=3.6537;SRR=25;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	0/1:-141.408,0,-133.202:111:54:57:2003:1917:54,57	.	1/1:-165.399,-17.7608,0:59:0:59:1926:0	1/1:-134.342,-10.1929,0:46:1:45:1589:38:1,45	0/1:-162.094,0,-161.606:127:63:64:2298:2299	0/1:-190.615,0,-153.083:140:64:76:2684:2243:64,76	0/1:-107.843,0,-135.198:103:57:46:1609:2050:57,46	.	.	.	1/1:-323.212,-28.4866,0:107:1:106:3779:39:1,106	1/1:-319.899,-32.5112,0:109:0:108:3677:0	.	.	.	.	1/1:-174.612,-17.7608,0:59:0:59:1996:0:0,59	0/1:-124.184,0,-216.09:138:83:55:1996:2968	0/1:-104.507,0,-59.8789:66:25:41:1437:912	1/1:-142.788,-14.7505,0:50:0:49:1660:0	.	.	.	0/1:-167.288,0,-175.366:137:69:67:2401:2525	.	.	.	1/1:-265.011,-23.5155,0:95:2:92:3093:54:2,92	.	.	1/1:-146.968,-14.4494,0:49:0:48:1685:0	.	.	.	.	1/1:-121.81,-12.3422,0:42:0:41:1394:0	1/1:-188.554,-18.0618,0:60:0:60:2168:0
+chrX	153640406	.	C	T	1118.81	.	AB=0.402062;ABP=11.0918;AC=22;AF=0.5;AN=26;AO=39;CIGAR=1X;DP=709;DPB=97;DPRA=0;EPP=3.51141;EPPR=4.35811;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=41.931;NS=1;NUMALT=1;ODDS=192.803;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1434;QR=2032;RO=58;RPL=6;RPP=43.6001;RPPR=62.913;RPR=33;RUN=1;SAF=25;SAP=9.74743;SAR=14;SF=5,8,9,14,17,21,22,23,26,27,32,33,35;SRF=35;SRP=8.40154;SRR=23;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	0/1:-95.3643,0,-147.402:97:58:39:1434:2032:58,39	.	.	1/1:-110.187,-10.5361,0:36:0:35:1274:0	0/1:-153.073,0,-100.988:102:43:59:2142:1510:43,59	.	.	.	.	1/1:-94.0616,-9.0309,0:30:0:30:1082:0	.	.	0/1:-120.358,0,-100.514:90:41:49:1697:1464	.	.	.	0/1:-59.7597,0,-42.5166:41:17:24:829:628:17,24	1/1:-46.3312,-4.81648,0:16:0:16:528:0	1/1:-401.5,-37.0267,0:123:0:123:4646:0	.	.	1/1:-99.3379,-10.235,0:34:0:34:1167:0	1/1:-154.482,-14.4494,0:48:0:48:1781:0:0,48	.	.	.	.	1/1:-102.4,-9.93399,0:33:0:33:1208:0	1/1:-147.645,-13.5464,0:45:0:45:1703:0	.	1/1:-42.9571,-4.21442,0:14:0:14:491:0	.
+chrX	153641619	.	C	T	4277.27	.	AB=0.471074;ABP=5.64837;AC=3;AF=0.5;AN=6;AO=171;CIGAR=1X;DP=1120;DPB=363;DPRA=0;EPP=8.61041;EPPR=5.9056;GTI=0;LEN=1;MEANALT=1;MQM=41.7427;MQMR=41.4948;NS=1;NUMALT=1;ODDS=874.872;PAIRED=0.988304;PAIREDR=0.96875;PAO=0;PQA=0;PQR=0;PRO=0;QA=5852;QR=6603;RO=192;RPL=134;RPP=122.492;RPPR=111.629;RPR=37;RUN=1;SAF=71;SAP=13.6899;SAR=100;SF=0,5,18;SRF=77;SRP=19.3416;SRR=115;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	0/1:-401.469,0,-464.854:363:192:171:5852:6603:192,171	.	.	.	.	0/1:-656.831,0,-586.811:521:246:274:9319:8577:246,274	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-288.432,0,-260.522:236:114:121:4105:3806	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chrX	153648032	.	C	T	8838.26	.	AB=0;ABP=0;AC=2;AF=1;AN=2;AO=285;CIGAR=1X;DP=287;DPB=287;DPRA=0;EPP=3.93222;EPPR=0;GTI=0;LEN=1;MEANALT=2;MQM=41.4912;MQMR=0;NS=1;NUMALT=1;ODDS=399.699;PAIRED=0.996491;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=10369;QR=0;RO=0;RPL=113;RPP=29.5327;RPPR=0;RPR=172;RUN=1;SAF=130;SAP=7.7723;SAR=155;SF=26;SRF=0;SRP=0;SRR=0;TYPE=snp	GT:GL:DP:RO:AO:QA:QR	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	1/1:-891.032,-85.7936,0:287:0:285:10369:0	.	.	.	.	.	.	.	.	.	.
+chrX	153648156	.	C	T	5688.38	.	AB=0;ABP=0;AC=2;AF=1;AN=2;AO=189;CIGAR=1X;DP=192;DPB=192;DPRA=0;EPP=3.02179;EPPR=0;GTI=0;LEN=1;MEANALT=3;MQM=41.7407;MQMR=0;NS=1;NUMALT=1;ODDS=266.615;PAIRED=0.994709;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=6648;QR=0;RO=0;RPL=119;RPP=30.596;RPPR=0;RPR=70;RUN=1;SAF=74;SAP=22.3238;SAR=115;SF=11;SRF=0;SRP=0;SRR=0;TYPE=snp	GT:GL:DP:RO:AO:QA:QR	.	.	.	.	.	.	.	.	.	.	.	1/1:-577.262,-56.8947,0:192:0:189:6648:0	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr3	12626632	.	T	G	2121	.	AB=0.544118;ABP=4.1599;AC=3;AF=0.5;AN=6;AO=37;CIGAR=1X;DP=269;DPB=68;DPRA=0;EPP=12.9286;EPPR=3.64073;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=42;NS=1;NUMALT=1;ODDS=162.215;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=1312;QR=1142;RO=31;RPL=33;RPP=52.3673;RPPR=14.8483;RPR=4;RUN=1;SAF=8;SAP=28.8919;SAR=29;SF=0,12,16;SRF=8;SRP=18.771;SRR=23;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	0/1:-94.0646,0,-78.949:68:31:37:1312:1142:31,37	.	.	.	.	.	.	.	.	.	.	.	0/1:-190.765,0,-93.4044:110:40:70:2579:1456:40,70	.	.	.	0/1:-155.151,0,-82.6494:91:34:57:2102:1269:34,57	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr12	32974391	.	CA	C	4511	.	AB=0;ABP=0;AC=4;AF=1;AN=6;AO=105;CIGAR=1X;DP=346;DPB=105;DPRA=0;EPP=65.5694;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=41.4667;MQMR=0;NS=1;NUMALT=1;ODDS=150.166;PAIRED=0.971429;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=3883;QR=0;RO=0;RPL=52;RPP=3.03098;RPPR=0;RPR=53;RUN=1;SAF=57;SAP=4.68544;SAR=48;SF=0,5,10;SRF=0;SRP=0;SRR=0;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	1/1:-334.829,-31.6082,0:105:0:105:3883:0:0,105	.	.	.	.	0/1:-145.191,0,-214.105:136:79:57:2163:2957:79,57	.	.	.	.	0/1:-155.002,0,-123.439:105:48:57:2154:1795:48,57	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr7	91726576	.	C	T	3246.67	.	AB=0.471074;ABP=5.64837;AC=3;AF=0.5;AN=6;AO=171;CIGAR=1X;DP=1120;DPB=363;DPRA=0;EPP=8.61041;EPPR=5.9056;GTI=0;LEN=1;MEANALT=1;MQM=41.7427;MQMR=41.4948;NS=1;NUMALT=1;ODDS=874.872;PAIRED=0.988304;PAIREDR=0.96875;PAO=0;PQA=0;PQR=0;PRO=0;QA=5852;QR=6603;RO=192;RPL=134;RPP=122.492;RPPR=111.629;RPR=37;RUN=1;SAF=71;SAP=13.6899;SAR=100;SF=0,5,18;SRF=77;SRP=19.3416;SRR=115;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	0/1:-401.469,0,-464.854:363:192:171:5852:6603:192,171	.	.	.	.	0/1:-656.831,0,-586.811:521:246:274:9319:8577:246,274	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-288.432,0,-260.522:236:114:121:4105:3806	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr7	91737871	.	C	G	541	.	AB=0;ABP=0;AC=2;AF=1;AN=2;AO=27;CIGAR=1X;DP=27;DPB=27;DPRA=0;EPP=3.09072;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=0;NS=1;NUMALT=1;ODDS=42.0351;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1034;QR=0;RO=0;RPL=16;RPP=5.02092;RPPR=0;RPR=11;RUN=1;SAF=10;SAP=6.95112;SAR=17;SF=19;SRF=0;SRP=0;SRR=0;TYPE=snp	GT:GL:DP:RO:AO:QA:QR	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	1/1:-89.5634,-8.12781,0:27:0:27:1034:0	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr6	7569521	.	G	GG	345	.	AB=0.535714;ABP=3.32051;AC=1;AF=0.5;AN=2;AO=15;CIGAR=1X;DP=28;DPB=28;DPRA=0;EPP=3.15506;EPPR=4.51363;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=42;NS=1;NUMALT=1;ODDS=67.9895;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=563;QR=500;RO=13;RPL=11;RPP=10.1038;RPPR=16.5402;RPR=4;RUN=1;SAF=4;SAP=10.1038;SAR=11;SF=24;SRF=5;SRP=4.51363;SRR=8;TYPE=dup	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-40.6717,0,-35.0576:28:13:15:563:500:13,15	.	.	.	.	.	.	.	.	.	.	.	.
+chr1	156100468	.	TCTGCTGAAC	TCTGCTGAACTCTGCTGAAC	768	.	AB=0;ABP=0;AC=7;AF=1;AN=10;AO=40;CIGAR=1X;DP=501;DPB=40;DPRA=0;EPP=39.7082;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=41.525;MQMR=0;NS=1;NUMALT=1;ODDS=60.0569;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1518;QR=0;RO=0;RPL=24;RPP=6.48466;RPPR=0;RPR=16;RUN=1;SAF=19;SAP=3.22745;SAR=21;SF=1,2,6,9,21;SRF=0;SRP=0;SRR=0;TYPE=dup	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	.	0/1:-175.528,0,-154.521:126:60:66:2465:2223:60,66	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0/1:-64.6482,0,-139.169:79:51:28:1019:1895:51,28	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
+chr11	47369407	.	C	T	501	.	AB=0;ABP=0;AC=2;AF=1;AN=2;AO=35;CIGAR=1X;DP=35;DPB=35;DPRA=0;EPP=4.56135;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=0;NS=1;NUMALT=1;ODDS=53.1255;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1280;QR=0;RO=0;RPL=23;RPP=10.5174;RPPR=0;RPR=12;RUN=1;SAF=18;SAP=3.07234;SAR=17;SF=33;SRF=0;SRP=0;SRR=0;TYPE=snp	GT:GL:DP:RO:AO:QA:QR	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	1/1:-111.22,-10.5361,0:35:0:35:1280:0	.	.	.
+chr1	78401653	.	AAAT	A	4511	.	AB=0.578723;ABP=15.6603;AC=14;AF=0.5;AN=18;AO=136;CIGAR=1X;DP=1337;DPB=235;DPRA=0;EPP=5.30951;EPPR=7.94546;GTI=0;LEN=1;MEANALT=1;MQM=41.9853;MQMR=41.8182;NS=1;NUMALT=1;ODDS=541.717;PAIRED=0.992647;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=4964;QR=3634;RO=99;RPL=67;RPP=3.07417;RPPR=3.03223;RPR=69;RUN=1;SAF=65;SAP=3.5851;SAR=71;SF=5,8,10,12,17,21,31,34,35;SRF=44;SRP=5.66432;SRR=55;TYPE=del	GT:GL:DP:RO:AO:QA:QR:AD	.	.	.	.	.	0/1:-359.476,0,-243.86:235:99:136:4964:3634:99,136	.	.	1/1:-185.165,-17.7608,0:59:0:59:2144:0	.	1/1:-610.653,-56.8947,0:189:0:189:7057:0:0,189	.	0/1:-372.111,0,-309.022:261:121:140:5204:4473:121,140	.	.	.	.	0/1:-365.814,0,-293.291:256:118:138:5118:4296	.	.	.	0/1:-58.6749,0,-214.305:107:78:29:1046:2839:78,29	.	.	.	.	.	.	.	.	.	1/1:-283.917,-27.3937,0:91:0:91:3272:0	.	.	1/1:-247.785,-22.8783,0:76:0:76:2860:0	1/1:-202.084,-18.9649,0:63:0:63:2325:0	.
+chr12	33030841	.	CCGCCTGGCCGA	C	601	.	AB=0;ABP=0;AC=2;AF=1;AN=2;AO=35;CIGAR=1X;DP=35;DPB=35;DPRA=0;EPP=4.56135;EPPR=0;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=0;NS=1;NUMALT=1;ODDS=53.1255;PAIRED=1;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1280;QR=0;RO=0;RPL=23;RPP=10.5174;RPPR=0;RPR=12;RUN=1;SAF=18;SAP=3.07234;SAR=17;SF=33;SRF=0;SRP=0;SRR=0;TYPE=snp	GT:GL:DP:RO:AO:QA:QR	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	1/1:-111.22,-10.5361,0:35:0:35:1280:0	.	.	.
+chr2	179434234	.	AC	A	114	.	AB=0;ABP=0;AC=4;AF=1;AN=6;AO=192;CIGAR=1X;DP=645;DPB=196;DPRA=0;EPP=6.67466;EPPR=5.18177;GTI=0;LEN=1;MEANALT=1;MQM=42;MQMR=42;NS=1;NUMALT=1;ODDS=230.74;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=7300;QR=154;RO=4;RPL=116;RPP=21.1059;RPPR=5.18177;RPR=76;RUN=1;SAF=73;SAP=26.9417;SAR=119;SF=0,5,10;SRF=2;SRP=3.0103;SRR=2;TYPE=snp	GT:GL:DP:RO:AO:QA:QR:AD	1/1:-616.097,-45.3525,0:196:4:192:7300:154:4,192	.	.	.	.	0/1:-369.93,0,-330.107:263:127:136:5204:4725:127,136	.	.	.	.	0/1:-218.907,0,-273.771:186:100:84:3179:3808:100,84	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/tool-data/annovar.loc	Tue Jun 09 16:21:34 2020 +0000
@@ -0,0 +1,85 @@
+
+#location of humandb the fields are tab delimited
+db	location	/cvmfs/elixir-italy.covacs.refdata/annovardb/humandb_vinyl
+#db	location	/annovardb/HumanDBAnnovar
+
+
+#definition of present db name + type(gene_ann, region, filter ) + assembly of the genome the fields are tab delimited
+#gene_ann
+refGene	gene_ann	hg19
+#filter
+dbnsfp35a	filter	hg19
+esp6500siv2_ea	filter	hg19
+exac03nontcga	filter	hg19
+gnomad211_exome	filter	hg19
+kaviar_20150923	filter	hg19
+hrcr1	filter	hg19
+avsnp150	filter	hg19
+clinvar_20190305	filter	hg19
+abraom	filter	hg19
+1000g2015aug_all	filter	hg19
+gnomad211_genome	filter	hg19
+gme	filter	hg19
+dbscsnv11	filter	hg19
+#for more info about the databases http://annovar.openbioinformatics.org/en/latest/user-guide/download/#-for-filter-based-annotation
+#eqtl
+Adipose_Subcutaneous	eqtl	hg19
+Adipose_Visceral_Omentum	eqtl	hg19
+Adrenal_Gland	eqtl	hg19
+Artery_Aorta	eqtl	hg19
+Artery_Coronary	eqtl	hg19
+Artery_Tibial	eqtl	hg19
+Brain_Amygdala	eqtl	hg19
+Brain_Anterior_cingulate_cortex_BA24	eqtl	hg19
+Brain_Caudate_basal_ganglia	eqtl	hg19
+Brain_Cerebellar_Hemisphere	eqtl	hg19
+Brain_Cerebellum	eqtl	hg19
+Brain_Cortex	eqtl	hg19
+Brain_Frontal_Cortex_BA9	eqtl	hg19
+Brain_Hippocampus	eqtl	hg19
+Brain_Hypothalamus	eqtl	hg19
+Brain_Nucleus_accumbens_basal_ganglia	eqtl	hg19
+Brain_Putamen_basal_ganglia	eqtl	hg19
+Brain_Spinal_cord_cervical_c-1	eqtl	hg19
+Brain_Substantia_nigra	eqtl	hg19
+Breast_Mammary_Tissue	eqtl	hg19
+Cells_EBV-transformed_lymphocytes	eqtl	hg19
+Cells_Transformed_fibroblasts	eqtl	hg19
+Colon_Sigmoid	eqtl	hg19
+Colon_Transverse	eqtl	hg19
+Esophagus_Gastroesophageal_Junction	eqtl	hg19
+Esophagus_Mucosa	eqtl	hg19
+Esophagus_Muscularis	eqtl	hg19
+Heart_Atrial_Appendage	eqtl	hg19
+Heart_Left_Ventricle	eqtl	hg19
+Liver	eqtl	hg19
+Lung	eqtl	hg19
+Minor_Salivary_Gland	eqtl	hg19
+Muscle_Skeletal	eqtl	hg19
+Nerve_Tibial	eqtl	hg19
+Ovary	eqtl	hg19
+Pancreas	eqtl	hg19
+Pituitary	eqtl	hg19
+Prostate	eqtl	hg19
+refGene	eqtl	hg19
+Skin_Not_Sun_Exposed_Suprapubic	eqtl	hg19
+Skin_Sun_Exposed_Lower_leg	eqtl	hg19
+Small_Intestine_Terminal_Ileum	eqtl	hg19
+Spleen	eqtl	hg19
+Stomach	eqtl	hg19
+Testis	eqtl	hg19
+Thyroid	eqtl	hg19
+Uterus	eqtl	hg19
+Vagina	eqtl	hg19
+Whole_Blood	eqtl	hg19
+#tracce personalizzate
+ENSEMBLReg	custom	hg19
+ENSmiRNA	custom	hg19
+ENSTFBS	custom	hg19
+GWAS	filter	hg19
+nCER90	custom	hg19
+nCER95	custom	hg19
+ORegAnno_REGULATORY_P	filter	hg19
+ORegAnno_REGULATORY_R	custom	hg19
+ORegAnno_REGULATORY_TFBS	custom	hg19
+ORegmiRNA	custom	hg19
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/tool_data_table_conf.xml.sample	Tue Jun 09 16:21:34 2020 +0000
@@ -0,0 +1,5 @@
+<!-- Location of annovar_elixir loc file -->
+<table name="annovar" comment_char="#">
+	<columns> value, type, path</columns>
+	<file path="tool-data/annovar.loc" />
+</table>