Mercurial > repos > elixir-it > covacs_varscan2
comparison tool-data/covacs_bed.loc.sample @ 0:eaac11a49bd2 draft
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author | elixir-it |
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date | Fri, 09 Nov 2018 06:06:32 -0500 |
parents | |
children | 44e9fd8fd25a |
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-1:000000000000 | 0:eaac11a49bd2 |
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1 #This is a sample file distributed with Galaxy that enables tools | |
2 #to use a directory bed file for covacs sequences data files. You will need | |
3 #to create these data files and then create a bed_loc.loc file | |
4 #similar to this one (store it in this directory) that points to | |
5 #the directories in which those files are stored. The bed_loc.loc | |
6 #file has this format (longer white space characters are TAB characters): | |
7 # | |
8 #<unique_id> <dbkey> <display_name> <file_path> | |
9 # | |
10 # | |
11 #Note that for backwards compatibility with workflows, the unique ID of | |
12 #an entry must be the path that was in the original loc file, because that | |
13 #is the value stored in the workflow for that parameter. That is why the | |
14 #hg19 entry above looks odd. New genomes can be better-looking. | |
15 # | |
16 hg19 hg19 hg19-padded /export/BED/S07084713_Padded.bed | |
17 hgbed hg19 hg19-bed-test /export/BED/chr22.bed |