# HG changeset patch # User elixir-it # Date 1542315326 18000 # Node ID cbe203c9bc3a67d58682788ea72c48d16d87c3b2 # Parent 03593410f057f91ad32d024f33e4e2c03569ca13 Uploaded diff -r 03593410f057 -r cbe203c9bc3a tool-data/covacs_bed.loc.sample --- a/tool-data/covacs_bed.loc.sample Fri Nov 09 05:25:43 2018 -0500 +++ b/tool-data/covacs_bed.loc.sample Thu Nov 15 15:55:26 2018 -0500 @@ -13,5 +13,5 @@ #is the value stored in the workflow for that parameter. That is why the #hg19 entry above looks odd. New genomes can be better-looking. # -hg19 hg19 hg19-padded /export/BED/S07084713_Padded.bed -hgbed hg19 hg19-bed-test /export/BED/chr22.bed +#hg19 hg19 hg19-padded /export/BED/S07084713_Padded.bed +#hgbed hg19 hg19-bed-test /export/BED/chr22.bed diff -r 03593410f057 -r cbe203c9bc3a tool-data/covacs_gatk_indexes.loc.sample --- a/tool-data/covacs_gatk_indexes.loc.sample Fri Nov 09 05:25:43 2018 -0500 +++ b/tool-data/covacs_gatk_indexes.loc.sample Thu Nov 15 15:55:26 2018 -0500 @@ -32,5 +32,5 @@ #is the value stored in the workflow for that parameter. That is why the #hg19 entry above looks odd. New genomes can be better-looking. # -hg38 hg38 hg38_GDC /export/gatkhg38pl/GRCh38.d1.vd1.fa -hg19 hg19 hg19 /export/gatk_hg19_index_bundle/ucsc.hg19.fasta +#hg38 hg38 hg38_GDC /export/gatkhg38pl/GRCh38.d1.vd1.fa +#hg19 hg19 hg19 /export/gatk_hg19_index_bundle/ucsc.hg19.fasta