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comparison meme_chip_wrapper.xml @ 8:9fa889764fa5 draft

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planemo upload
author eduardo
date Mon, 20 Feb 2017 13:41:31 -0500
parents 1ed33876e25d
children 89eab5bd597e
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7:1ed33876e25d 8:9fa889764fa5
4 <requirement type="package" version="2.6">perl_module_HTML_Template</requirement> 4 <requirement type="package" version="2.6">perl_module_HTML_Template</requirement>
5 </requirements> 5 </requirements>
6 <description></description> 6 <description></description>
7 <version_command>echo "MEME version r4.10.0"</version_command> 7 <version_command>echo "MEME version r4.10.0"</version_command>
8 <command> meme-chip $input_file -o ${memechip_out.files_path} 8 <command> meme-chip $input_file -o ${memechip_out.files_path}
9 -db $__tool_directory__/JASPAR_CORE_2016.memep 9 -db $__tool_directory__/JASPAR_CORE_2016.meme
10 #if str( $options_type.options_type_selector ) == 'advanced': 10 #if str( $options_type.options_type_selector ) == 'advanced':
11 #if str( $options_type.bg_type.bg_type_selector) == 'bg_user': 11 #if str( $options_type.bg_type.bg_type_selector) == 'bg_user':
12 -bfile "${ str( $options_type.bg_type.bfile ) }" 12 -bfile "${ str( $options_type.bg_type.bfile ) }"
13 #end if 13 #end if
14 14