# HG changeset patch
# User Eduardo <eduardoalves@abdn.ac.uk>
# Date 1448459688 0
# Node ID dfa4f03b5baaf4c42e8ea9853f269ec0880146ec
# Parent  f35d462f57b9449c8d3a530d30a515b605cd473f
added <requirement type="set_environment">

diff -r f35d462f57b9 -r dfa4f03b5baa blobplot.xml
--- a/blobplot.xml	Wed Nov 25 13:39:32 2015 +0000
+++ b/blobplot.xml	Wed Nov 25 13:54:48 2015 +0000
@@ -3,7 +3,7 @@
   <requirements>
       <requirement type="package" version="0.9.3">r_ggplot2</requirement>
       <requirement type="package" version="0.1.19">samtools</requirement>
-
+      <requirement type="set_environment">TAXDUMP</requirement>
   </requirements>
   <command>
   cut -f1,13 $blast_res | perl gc_cov_annotate.pl --blasttaxid -  --assembly $coding_seq --taxdump $TAXDUMP --bam $bam_file --out  blob_file  &amp;&amp;