# HG changeset patch
# User eduardo
# Date 1497725020 14400
# Node ID 31e855c959361ccfc498f37807ae8500d765f816
# Parent  ce990f818362331763c9753e6ee12829104ed48d
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/annotateviz commit 9bbaa3eacc76ff3bf2b6da313cc0d85705f15dd1-dirty

diff -r ce990f818362 -r 31e855c95936 annotateviz.xml
--- a/annotateviz.xml	Sat Jun 17 13:45:05 2017 -0400
+++ b/annotateviz.xml	Sat Jun 17 14:43:40 2017 -0400
@@ -14,12 +14,11 @@
 --outdir $output.files_path
 $trackxml &&
 ##  $output.files_path/index.html $output;
-python  $__tool_directory__/annotateviz.py $db > $__tool_directory__/trans.json  &&
-sed "s@input_db@${__app__.security.encode_id($db.id)}@" $__tool_directory__/static/trinotateviz.html > $output  &&
-cp $__tool_directory__/static/js/gff_app.js ${output.files_path}  &&
-cp $__tool_directory__/static/css/main.css ${output.files_path}  &&
-cp $__tool_directory__/static/trans.json ${output.files_path};
-
+python  $__tool_directory__/annotateviz.py $db > $__tool_directory__/trans.json &&
+sed "s@input_db@${__app__.security.encode_id($db.id)}@" $__tool_directory__/static/trinotateviz.html > $output &&
+cp $__tool_directory__/static/js/gff_app.js ${output.files_path} &&
+cp $__tool_directory__/static/css/main.css ${output.files_path} &&
+cp $__tool_directory__/trans.json ${output.files_path};
 ]]></command>
   <configfiles>
       <configfile name="trackxml"><![CDATA[<?xml version="1.0"?>
diff -r ce990f818362 -r 31e855c95936 static/trinotateviz.html
--- a/static/trinotateviz.html	Sat Jun 17 13:45:05 2017 -0400
+++ b/static/trinotateviz.html	Sat Jun 17 14:43:40 2017 -0400
@@ -21,9 +21,6 @@
 
     <div id="GenomeBrowser" style="height: 100%; width: 100%; padding: 0; border: 0;"></div>
     <div style="display: none">JBrowseDefaultMainPage</div>
-
-
- <script type="text/javascript">
      <script type="text/javascript">
             // jshint unused: false
             var dojoConfig = {