Mercurial > repos > ebi-gxa > suite_scanpy_scripts

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"planemo upload for repository https://github.com/ebi-gene-expression-group/container-galaxy-sc-tertiary/tree/develop/tools/tertiary-analysis/scanpy commit e2ec0706fd62528e5198e3c050d91ab0ee6cd4da"
author ebi-gxa
date Fri, 12 Jun 2020 12:43:41 +0000
parents 46c3b177bd0c
children
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<?xml version="1.0" ?>
<repositories description="scanpy-scripts, command-line wrappers around Scanpy.">
    <repository changeset_revision="d5cdb09739f4" name="scanpy_find_cluster" owner="ebi-gxa" toolshed="https://testtoolshed.g2.bx.psu.edu"/>
    <repository changeset_revision="a9bce05fbe3f" name="scanpy_plot_embed" owner="ebi-gxa" toolshed="https://testtoolshed.g2.bx.psu.edu"/>
    <repository changeset_revision="fd03785d0935" name="scanpy_filter_cells" owner="ebi-gxa" toolshed="https://testtoolshed.g2.bx.psu.edu"/>
    <repository changeset_revision="4ef335ac2864" name="scanpy_filter_genes" owner="ebi-gxa" toolshed="https://testtoolshed.g2.bx.psu.edu"/>
    <repository changeset_revision="777fd77dff37" name="scanpy_run_fdg" owner="ebi-gxa" toolshed="https://testtoolshed.g2.bx.psu.edu"/>
    <repository changeset_revision="a11effabd6aa" name="scanpy_normalise_data" owner="ebi-gxa" toolshed="https://testtoolshed.g2.bx.psu.edu"/>
    <repository changeset_revision="c47ce59b2912" name="scanpy_run_diffmap" owner="ebi-gxa" toolshed="https://testtoolshed.g2.bx.psu.edu"/>
    <repository changeset_revision="a6b2076b6600" name="scanpy_plot_trajectory" owner="ebi-gxa" toolshed="https://testtoolshed.g2.bx.psu.edu"/>
    <repository changeset_revision="4afc03f6e8e0" name="scanpy_run_pca" owner="ebi-gxa" toolshed="https://testtoolshed.g2.bx.psu.edu"/>
    <repository changeset_revision="9b07e1cf91d2" name="scanpy_scale_data" owner="ebi-gxa" toolshed="https://testtoolshed.g2.bx.psu.edu"/>
    <repository changeset_revision="8b0cfd707c6c" name="scanpy_run_dpt" owner="ebi-gxa" toolshed="https://testtoolshed.g2.bx.psu.edu"/>
    <repository changeset_revision="ee1765268174" name="scanpy_parameter_iterator" owner="ebi-gxa" toolshed="https://testtoolshed.g2.bx.psu.edu"/>
    <repository changeset_revision="34a9d77a558d" name="anndata_ops" owner="ebi-gxa" toolshed="https://testtoolshed.g2.bx.psu.edu"/>
    <repository changeset_revision="6e75d75c0da1" name="scanpy_run_tsne" owner="ebi-gxa" toolshed="https://testtoolshed.g2.bx.psu.edu"/>
    <repository changeset_revision="0cb9d0e98ccf" name="scanpy_find_markers" owner="ebi-gxa" toolshed="https://testtoolshed.g2.bx.psu.edu"/>
    <repository changeset_revision="f57cf7d0dc93" name="scanpy_run_paga" owner="ebi-gxa" toolshed="https://testtoolshed.g2.bx.psu.edu"/>
    <repository changeset_revision="888aa6dd3a0a" name="scanpy_compute_graph" owner="ebi-gxa" toolshed="https://testtoolshed.g2.bx.psu.edu"/>
    <repository changeset_revision="e26b80f2a3e4" name="scanpy_find_variable_genes" owner="ebi-gxa" toolshed="https://testtoolshed.g2.bx.psu.edu"/>
    <repository changeset_revision="aed61b9dcca9" name="scanpy_regress_variable" owner="ebi-gxa" toolshed="https://testtoolshed.g2.bx.psu.edu"/>
    <repository changeset_revision="b2c4f3eabcf1" name="scanpy_read_10x" owner="ebi-gxa" toolshed="https://testtoolshed.g2.bx.psu.edu"/>
    <repository changeset_revision="748969354be3" name="scanpy_run_umap" owner="ebi-gxa" toolshed="https://testtoolshed.g2.bx.psu.edu"/>
</repositories>