Mercurial > repos > ebi-gxa > suite_scanpy_scripts

view repository_dependencies.xml @ 3:542601f1e574 draft

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"planemo upload for repository https://github.com/ebi-gene-expression-group/container-galaxy-sc-tertiary/tree/develop/tools/tertiary-analysis/scanpy commit c98a1caf2a3eed8b1571dae2bf7a794adecdf406"
author ebi-gxa
date Wed, 08 Apr 2020 09:06:42 +0000
parents d7ecda865870
children 3b65b33c7a2a
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<?xml version="1.0" ?>
<repositories description="scanpy-scripts, command-line wrappers around Scanpy.">
    <repository changeset_revision="4371883fc21c" name="scanpy_find_cluster" owner="ebi-gxa" toolshed="https://testtoolshed.g2.bx.psu.edu"/>
    <repository changeset_revision="224d1c9d7f19" name="scanpy_plot_embed" owner="ebi-gxa" toolshed="https://testtoolshed.g2.bx.psu.edu"/>
    <repository changeset_revision="4c806f3f094c" name="scanpy_filter_cells" owner="ebi-gxa" toolshed="https://testtoolshed.g2.bx.psu.edu"/>
    <repository changeset_revision="9fd2a7160b35" name="scanpy_filter_genes" owner="ebi-gxa" toolshed="https://testtoolshed.g2.bx.psu.edu"/>
    <repository changeset_revision="b9dc69f6b3f1" name="scanpy_run_fdg" owner="ebi-gxa" toolshed="https://testtoolshed.g2.bx.psu.edu"/>
    <repository changeset_revision="5704635cef67" name="scanpy_normalise_data" owner="ebi-gxa" toolshed="https://testtoolshed.g2.bx.psu.edu"/>
    <repository changeset_revision="7e6f517f0a7d" name="scanpy_run_diffmap" owner="ebi-gxa" toolshed="https://testtoolshed.g2.bx.psu.edu"/>
    <repository changeset_revision="62f480b594c5" name="scanpy_plot_trajectory" owner="ebi-gxa" toolshed="https://testtoolshed.g2.bx.psu.edu"/>
    <repository changeset_revision="06b56d36fccc" name="scanpy_run_pca" owner="ebi-gxa" toolshed="https://testtoolshed.g2.bx.psu.edu"/>
    <repository changeset_revision="edb0d2e8ab66" name="scanpy_scale_data" owner="ebi-gxa" toolshed="https://testtoolshed.g2.bx.psu.edu"/>
    <repository changeset_revision="230ed44ddf01" name="scanpy_run_dpt" owner="ebi-gxa" toolshed="https://testtoolshed.g2.bx.psu.edu"/>
    <repository changeset_revision="a13cc1d401b7" name="scanpy_parameter_iterator" owner="ebi-gxa" toolshed="https://testtoolshed.g2.bx.psu.edu"/>
    <repository changeset_revision="0df0c864dc68" name="anndata_ops" owner="ebi-gxa" toolshed="https://testtoolshed.g2.bx.psu.edu"/>
    <repository changeset_revision="80a4c2939242" name="scanpy_run_tsne" owner="ebi-gxa" toolshed="https://testtoolshed.g2.bx.psu.edu"/>
    <repository changeset_revision="e20b84e8b579" name="scanpy_find_markers" owner="ebi-gxa" toolshed="https://testtoolshed.g2.bx.psu.edu"/>
    <repository changeset_revision="ae4616f3806e" name="scanpy_run_paga" owner="ebi-gxa" toolshed="https://testtoolshed.g2.bx.psu.edu"/>
    <repository changeset_revision="77f16c784c19" name="scanpy_compute_graph" owner="ebi-gxa" toolshed="https://testtoolshed.g2.bx.psu.edu"/>
    <repository changeset_revision="70840a50d3d2" name="scanpy_find_variable_genes" owner="ebi-gxa" toolshed="https://testtoolshed.g2.bx.psu.edu"/>
    <repository changeset_revision="88b0cb06c2b1" name="scanpy_regress_variable" owner="ebi-gxa" toolshed="https://testtoolshed.g2.bx.psu.edu"/>
    <repository changeset_revision="4af2017cbece" name="scanpy_read_10x" owner="ebi-gxa" toolshed="https://testtoolshed.g2.bx.psu.edu"/>
    <repository changeset_revision="f59c9aaf8e7c" name="scanpy_run_umap" owner="ebi-gxa" toolshed="https://testtoolshed.g2.bx.psu.edu"/>
</repositories>