diff scpred_train_model.xml @ 2:bdca74ff364e draft

"planemo upload for repository https://github.com/ebi-gene-expression-group/container-galaxy-sc-tertiary/ commit 241c850301f8094f6aa0016e2335a8b550c29aed"

--- a/scpred_train_model.xml	Thu Apr 16 09:28:51 2020 +0000
+++ b/scpred_train_model.xml	Fri Apr 24 15:17:36 2020 +0000
@@ -5,10 +5,14 @@
     </macros>
     <expand macro="requirements" />
     <command detect_errors="exit_code"><![CDATA[
-        scpred_train_model.R --input-object "${input_object}" --model "${model}"  --output-path "${output_obj_path}" --train-probs-plot "${train_probs_plot}"
+        scpred_train_model.R --input-object "${input_object}" --model "${model}" --output-path "${output_obj_path}" --train-probs-plot "${train_probs_plot}"
+        #if $train_id
+        --train-id '${train_id}' 
+        #end if
         ]]></command>
     <inputs>
         <param type="data" name="input_object" label="Input SCE object" format="rdata" help="Input SCE object in .rds format"/>
+        <param type="text" name="train_id" label="Dataset ID" help="ID of the training dataset" />
         <param type="text" name="model" label="Model type to train" value="svmRadial" help="Model type used for training. Must be one of the models supported by Caret package. Default: svmRadial" />
     </inputs>
     <outputs>