Mercurial > repos > ebi-gxa > scanpy_parameter_iterator

annotate scanpy_macros.xml @ 1:81db17245979 draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/scanpy-scripts commit 41af6a6f7b0d302e0a1900d1ad8bc24718bfc84b
author ebi-gxa
date Wed, 20 Mar 2019 12:00:08 -0400
parents 86730078be1e
children a13cc1d401b7
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
0
86730078be1e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/scanpy-scripts commit dca9be719ceb86abad7589c240b1bb7656826c48-dirty
ebi-gxa
parents:
diff changeset
1 <macros>
86730078be1e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/scanpy-scripts commit dca9be719ceb86abad7589c240b1bb7656826c48-dirty
ebi-gxa
parents:
diff changeset
2 <token name="@TOOL_VERSION@">1.3.2</token>
86730078be1e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/scanpy-scripts commit dca9be719ceb86abad7589c240b1bb7656826c48-dirty
ebi-gxa
parents:
diff changeset
3 <token name="@HELP@">More information can be found at https://scanpy.readthedocs.io</token>
86730078be1e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/scanpy-scripts commit dca9be719ceb86abad7589c240b1bb7656826c48-dirty
ebi-gxa
parents:
diff changeset
4 <token name="@PLOT_OPTS@">
86730078be1e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/scanpy-scripts commit dca9be719ceb86abad7589c240b1bb7656826c48-dirty
ebi-gxa
parents:
diff changeset
5 #if $do_plotting.plot
86730078be1e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/scanpy-scripts commit dca9be719ceb86abad7589c240b1bb7656826c48-dirty
ebi-gxa
parents:
diff changeset
6 -P output.png
86730078be1e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/scanpy-scripts commit dca9be719ceb86abad7589c240b1bb7656826c48-dirty
ebi-gxa
parents:
diff changeset
7 --projectio $do_plotting.projection
86730078be1e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/scanpy-scripts commit dca9be719ceb86abad7589c240b1bb7656826c48-dirty
ebi-gxa
parents:
diff changeset
8 --components $do_plotting.components
86730078be1e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/scanpy-scripts commit dca9be719ceb86abad7589c240b1bb7656826c48-dirty
ebi-gxa
parents:
diff changeset
9 #if $do_plotting.color_by
86730078be1e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/scanpy-scripts commit dca9be719ceb86abad7589c240b1bb7656826c48-dirty
ebi-gxa
parents:
diff changeset
10 --color-by $do_plotting.color_by
86730078be1e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/scanpy-scripts commit dca9be719ceb86abad7589c240b1bb7656826c48-dirty
ebi-gxa
parents:
diff changeset
11 #end if
86730078be1e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/scanpy-scripts commit dca9be719ceb86abad7589c240b1bb7656826c48-dirty
ebi-gxa
parents:
diff changeset
12 #if $do_plotting.groups
86730078be1e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/scanpy-scripts commit dca9be719ceb86abad7589c240b1bb7656826c48-dirty
ebi-gxa
parents:
diff changeset
13 --group $do_plotting.groups
86730078be1e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/scanpy-scripts commit dca9be719ceb86abad7589c240b1bb7656826c48-dirty
ebi-gxa
parents:
diff changeset
14 #end if
86730078be1e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/scanpy-scripts commit dca9be719ceb86abad7589c240b1bb7656826c48-dirty
ebi-gxa
parents:
diff changeset
15 #if $do_plotting.use_raw
86730078be1e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/scanpy-scripts commit dca9be719ceb86abad7589c240b1bb7656826c48-dirty
ebi-gxa
parents:
diff changeset
16 --use-raw
86730078be1e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/scanpy-scripts commit dca9be719ceb86abad7589c240b1bb7656826c48-dirty
ebi-gxa
parents:
diff changeset
17 #end if
86730078be1e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/scanpy-scripts commit dca9be719ceb86abad7589c240b1bb7656826c48-dirty
ebi-gxa
parents:
diff changeset
18 #if $do_plotting.palette
86730078be1e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/scanpy-scripts commit dca9be719ceb86abad7589c240b1bb7656826c48-dirty
ebi-gxa
parents:
diff changeset
19 --palette $do_plotting.palette
86730078be1e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/scanpy-scripts commit dca9be719ceb86abad7589c240b1bb7656826c48-dirty
ebi-gxa
parents:
diff changeset
20 #end if
86730078be1e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/scanpy-scripts commit dca9be719ceb86abad7589c240b1bb7656826c48-dirty
ebi-gxa
parents:
diff changeset
21 #if $do_plotting.edges
86730078be1e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/scanpy-scripts commit dca9be719ceb86abad7589c240b1bb7656826c48-dirty
ebi-gxa
parents:
diff changeset
22 --edges
86730078be1e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/scanpy-scripts commit dca9be719ceb86abad7589c240b1bb7656826c48-dirty
ebi-gxa
parents:
diff changeset
23 #end if
86730078be1e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/scanpy-scripts commit dca9be719ceb86abad7589c240b1bb7656826c48-dirty
ebi-gxa
parents:
diff changeset
24 #if $do_plotting.arrows
86730078be1e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/scanpy-scripts commit dca9be719ceb86abad7589c240b1bb7656826c48-dirty
ebi-gxa
parents:
diff changeset
25 --arrows
86730078be1e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/scanpy-scripts commit dca9be719ceb86abad7589c240b1bb7656826c48-dirty
ebi-gxa
parents:
diff changeset
26 #end if
86730078be1e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/scanpy-scripts commit dca9be719ceb86abad7589c240b1bb7656826c48-dirty
ebi-gxa
parents:
diff changeset
27 #if not $do_plotting.sort_order
86730078be1e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/scanpy-scripts commit dca9be719ceb86abad7589c240b1bb7656826c48-dirty
ebi-gxa
parents:
diff changeset
28 --no-sort-order
86730078be1e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/scanpy-scripts commit dca9be719ceb86abad7589c240b1bb7656826c48-dirty
ebi-gxa
parents:
diff changeset
29 #end if
86730078be1e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/scanpy-scripts commit dca9be719ceb86abad7589c240b1bb7656826c48-dirty
ebi-gxa
parents:
diff changeset
30 #if $do_plotting.frameoff
86730078be1e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/scanpy-scripts commit dca9be719ceb86abad7589c240b1bb7656826c48-dirty
ebi-gxa
parents:
diff changeset
31 --frameoff
86730078be1e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/scanpy-scripts commit dca9be719ceb86abad7589c240b1bb7656826c48-dirty
ebi-gxa
parents:
diff changeset
32 #end if
86730078be1e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/scanpy-scripts commit dca9be719ceb86abad7589c240b1bb7656826c48-dirty
ebi-gxa
parents:
diff changeset
33 #end if
86730078be1e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/scanpy-scripts commit dca9be719ceb86abad7589c240b1bb7656826c48-dirty
ebi-gxa
parents:
diff changeset
34 </token>
86730078be1e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/scanpy-scripts commit dca9be719ceb86abad7589c240b1bb7656826c48-dirty
ebi-gxa
parents:
diff changeset
35 <xml name="requirements">
86730078be1e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/scanpy-scripts commit dca9be719ceb86abad7589c240b1bb7656826c48-dirty
ebi-gxa
parents:
diff changeset
36 <requirements>
86730078be1e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/scanpy-scripts commit dca9be719ceb86abad7589c240b1bb7656826c48-dirty
ebi-gxa
parents:
diff changeset
37 <requirement type="package" version="0.0.5">scanpy-scripts</requirement>
86730078be1e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/scanpy-scripts commit dca9be719ceb86abad7589c240b1bb7656826c48-dirty
ebi-gxa
parents:
diff changeset
38 <yield/>
86730078be1e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/scanpy-scripts commit dca9be719ceb86abad7589c240b1bb7656826c48-dirty
ebi-gxa
parents:
diff changeset
39 </requirements>
86730078be1e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/scanpy-scripts commit dca9be719ceb86abad7589c240b1bb7656826c48-dirty
ebi-gxa
parents:
diff changeset
40 </xml>
86730078be1e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/scanpy-scripts commit dca9be719ceb86abad7589c240b1bb7656826c48-dirty
ebi-gxa
parents:
diff changeset
41 <token name="@VERSION_HISTORY@"><![CDATA[
86730078be1e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/scanpy-scripts commit dca9be719ceb86abad7589c240b1bb7656826c48-dirty
ebi-gxa
parents:
diff changeset
42 **Version history**
86730078be1e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/scanpy-scripts commit dca9be719ceb86abad7589c240b1bb7656826c48-dirty
ebi-gxa
parents:
diff changeset
43
86730078be1e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/scanpy-scripts commit dca9be719ceb86abad7589c240b1bb7656826c48-dirty
ebi-gxa
parents:
diff changeset
44 1.3.2+galaxy0: Initial contribution. Ni Huang and Pablo Moreno, Expression Atlas team https://www.ebi.ac.uk/gxa/home at
86730078be1e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/scanpy-scripts commit dca9be719ceb86abad7589c240b1bb7656826c48-dirty
ebi-gxa
parents:
diff changeset
45 EMBL-EBI https://www.ebi.ac.uk/ and Teichmann Lab at Wellcome Sanger Institute.
86730078be1e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/scanpy-scripts commit dca9be719ceb86abad7589c240b1bb7656826c48-dirty
ebi-gxa
parents:
diff changeset
46 ]]></token>
86730078be1e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/scanpy-scripts commit dca9be719ceb86abad7589c240b1bb7656826c48-dirty
ebi-gxa
parents:
diff changeset
47 <xml name="citations">
86730078be1e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/scanpy-scripts commit dca9be719ceb86abad7589c240b1bb7656826c48-dirty
ebi-gxa
parents:
diff changeset
48 <citations>
86730078be1e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/scanpy-scripts commit dca9be719ceb86abad7589c240b1bb7656826c48-dirty
ebi-gxa
parents:
diff changeset
49 <citation type="doi">10.1186/s13059-017-1382-0</citation>
86730078be1e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/scanpy-scripts commit dca9be719ceb86abad7589c240b1bb7656826c48-dirty
ebi-gxa
parents:
diff changeset
50 <citation type="bibtex">
86730078be1e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/scanpy-scripts commit dca9be719ceb86abad7589c240b1bb7656826c48-dirty
ebi-gxa
parents:
diff changeset
51 @misc{githubscanpy-scripts,
86730078be1e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/scanpy-scripts commit dca9be719ceb86abad7589c240b1bb7656826c48-dirty
ebi-gxa
parents:
diff changeset
52 author = {Ni Huang, EBI Gene Expression Team},
86730078be1e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/scanpy-scripts commit dca9be719ceb86abad7589c240b1bb7656826c48-dirty
ebi-gxa
parents:
diff changeset
53 year = {2018},
86730078be1e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/scanpy-scripts commit dca9be719ceb86abad7589c240b1bb7656826c48-dirty
ebi-gxa
parents:
diff changeset
54 title = {Scanpy-scripts: command line interface for Scanpy},
86730078be1e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/scanpy-scripts commit dca9be719ceb86abad7589c240b1bb7656826c48-dirty
ebi-gxa
parents:
diff changeset
55 publisher = {GitHub},
86730078be1e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/scanpy-scripts commit dca9be719ceb86abad7589c240b1bb7656826c48-dirty
ebi-gxa
parents:
diff changeset
56 journal = {GitHub repository},
86730078be1e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/scanpy-scripts commit dca9be719ceb86abad7589c240b1bb7656826c48-dirty
ebi-gxa
parents:
diff changeset
57 url = {https://github.com/ebi-gene-expression-group/scanpy-scripts},
86730078be1e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/scanpy-scripts commit dca9be719ceb86abad7589c240b1bb7656826c48-dirty
ebi-gxa
parents:
diff changeset
58 }</citation>
86730078be1e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/scanpy-scripts commit dca9be719ceb86abad7589c240b1bb7656826c48-dirty
ebi-gxa
parents:
diff changeset
59 <yield />
86730078be1e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/scanpy-scripts commit dca9be719ceb86abad7589c240b1bb7656826c48-dirty
ebi-gxa
parents:
diff changeset
60 </citations>
86730078be1e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/scanpy-scripts commit dca9be719ceb86abad7589c240b1bb7656826c48-dirty
ebi-gxa
parents:
diff changeset
61 </xml>
86730078be1e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/scanpy-scripts commit dca9be719ceb86abad7589c240b1bb7656826c48-dirty
ebi-gxa
parents:
diff changeset
62 <xml name="input_object_params">
86730078be1e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/scanpy-scripts commit dca9be719ceb86abad7589c240b1bb7656826c48-dirty
ebi-gxa
parents:
diff changeset
63 <param name="input_obj_file" argument="--input-object-file" type="data" format="h5" label="Input object in hdf5 format"/>
86730078be1e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/scanpy-scripts commit dca9be719ceb86abad7589c240b1bb7656826c48-dirty
ebi-gxa
parents:
diff changeset
64 <param name="input_format" argument="--input-format" type="select" label="Format of input object">
86730078be1e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/scanpy-scripts commit dca9be719ceb86abad7589c240b1bb7656826c48-dirty
ebi-gxa
parents:
diff changeset
65 <option value="anndata" selected="true">AnnData format hdf5</option>
86730078be1e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/scanpy-scripts commit dca9be719ceb86abad7589c240b1bb7656826c48-dirty
ebi-gxa
parents:
diff changeset
66 <option value="loom">Loom format hdf5, current support is incomplete</option>
86730078be1e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/scanpy-scripts commit dca9be719ceb86abad7589c240b1bb7656826c48-dirty
ebi-gxa
parents:
diff changeset
67 </param>
86730078be1e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/scanpy-scripts commit dca9be719ceb86abad7589c240b1bb7656826c48-dirty
ebi-gxa
parents:
diff changeset
68 </xml>
86730078be1e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/scanpy-scripts commit dca9be719ceb86abad7589c240b1bb7656826c48-dirty
ebi-gxa
parents:
diff changeset
69 <xml name="output_object_params">
86730078be1e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/scanpy-scripts commit dca9be719ceb86abad7589c240b1bb7656826c48-dirty
ebi-gxa
parents:
diff changeset
70 <param name="output_format" argument="--output-format" type="select" label="Format of output object">
86730078be1e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/scanpy-scripts commit dca9be719ceb86abad7589c240b1bb7656826c48-dirty
ebi-gxa
parents:
diff changeset
71 <option value="anndata" selected="true">AnnData format hdf5</option>
86730078be1e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/scanpy-scripts commit dca9be719ceb86abad7589c240b1bb7656826c48-dirty
ebi-gxa
parents:
diff changeset
72 <option value="loom">Loom format hdf5, current support is defective</option>
86730078be1e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/scanpy-scripts commit dca9be719ceb86abad7589c240b1bb7656826c48-dirty
ebi-gxa
parents:
diff changeset
73 </param>
86730078be1e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/scanpy-scripts commit dca9be719ceb86abad7589c240b1bb7656826c48-dirty
ebi-gxa
parents:
diff changeset
74 </xml>
86730078be1e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/scanpy-scripts commit dca9be719ceb86abad7589c240b1bb7656826c48-dirty
ebi-gxa
parents:
diff changeset
75 <xml name="output_plot_params">
86730078be1e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/scanpy-scripts commit dca9be719ceb86abad7589c240b1bb7656826c48-dirty
ebi-gxa
parents:
diff changeset
76 <param name="color_by" argument="--color-by" type="text" value="n_genes" label="Color by attributes, comma separated strings"/>
86730078be1e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/scanpy-scripts commit dca9be719ceb86abad7589c240b1bb7656826c48-dirty
ebi-gxa
parents:
diff changeset
77 <param name="groups" argument="--groups" type="text" optional="ture" label="Restrict plotting to named groups, comma separated strings"/>
86730078be1e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/scanpy-scripts commit dca9be719ceb86abad7589c240b1bb7656826c48-dirty
ebi-gxa
parents:
diff changeset
78 <param name="projection" argument="--projection" type="select" label="Plot projection">
86730078be1e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/scanpy-scripts commit dca9be719ceb86abad7589c240b1bb7656826c48-dirty
ebi-gxa
parents:
diff changeset
79 <option value="2d" selected="true">2D</option>
86730078be1e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/scanpy-scripts commit dca9be719ceb86abad7589c240b1bb7656826c48-dirty
ebi-gxa
parents:
diff changeset
80 <option value="3d">3D</option>
86730078be1e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/scanpy-scripts commit dca9be719ceb86abad7589c240b1bb7656826c48-dirty
ebi-gxa
parents:
diff changeset
81 </param>
86730078be1e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/scanpy-scripts commit dca9be719ceb86abad7589c240b1bb7656826c48-dirty
ebi-gxa
parents:
diff changeset
82 <param name="components" argument="--components" type="text" value="1,2" label="Components to plot, comma separated integers"/>
86730078be1e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/scanpy-scripts commit dca9be719ceb86abad7589c240b1bb7656826c48-dirty
ebi-gxa
parents:
diff changeset
83 <param name="palette" argument="--palette" type="text" optional="true" label="Palette"/>
86730078be1e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/scanpy-scripts commit dca9be719ceb86abad7589c240b1bb7656826c48-dirty
ebi-gxa
parents:
diff changeset
84 <param name="use_raw" argument="--use-raw" type="boolean" checked="false" label="Use raw attributes if present"/>
86730078be1e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/scanpy-scripts commit dca9be719ceb86abad7589c240b1bb7656826c48-dirty
ebi-gxa
parents:
diff changeset
85 <param name="edges" argument="--edges" type="boolean" checked="false" label="Show edges"/>
86730078be1e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/scanpy-scripts commit dca9be719ceb86abad7589c240b1bb7656826c48-dirty
ebi-gxa
parents:
diff changeset
86 <param name="arrows" argument="--arrows" type="boolean" checked="false" label="Show arrows"/>
86730078be1e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/scanpy-scripts commit dca9be719ceb86abad7589c240b1bb7656826c48-dirty
ebi-gxa
parents:
diff changeset
87 <param name="sort_order" argument="--no-sort-order" type="boolean" checked="true" label="Element with high color-by value plot on top"/>
86730078be1e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/scanpy-scripts commit dca9be719ceb86abad7589c240b1bb7656826c48-dirty
ebi-gxa
parents:
diff changeset
88 <param name="frameoff" argument="--frameoff" type="boolean" checked="false" label="Omit frame"/>
86730078be1e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/scanpy-scripts commit dca9be719ceb86abad7589c240b1bb7656826c48-dirty
ebi-gxa
parents:
diff changeset
89 </xml>
86730078be1e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/scanpy-scripts commit dca9be719ceb86abad7589c240b1bb7656826c48-dirty
ebi-gxa
parents:
diff changeset
90 </macros>