Mercurial > repos > dsobral > batch_plot
comparison r_wrapper.sh @ 1:74753a2845b9 default tip
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author | dsobral |
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date | Fri, 23 Mar 2012 03:22:08 -0400 |
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0:71c4282199f0 | 1:74753a2845b9 |
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1 #!/bin/sh | |
2 | |
3 ### Run R providing the R script in $1 as standard input and passing | |
4 ### the remaining arguments on the command line | |
5 | |
6 # Function that writes a message to stderr and exits | |
7 function fail | |
8 { | |
9 echo "$@" >&2 | |
10 exit 1 | |
11 } | |
12 | |
13 # Ensure R executable is found | |
14 which R > /dev/null || fail "'R' is required by this tool but was not found on path" | |
15 | |
16 # Extract first argument | |
17 infile=$1; shift | |
18 | |
19 # Ensure the file exists | |
20 test -f $infile || fail "R input file '$infile' does not exist" | |
21 | |
22 # Invoke R passing file named by first argument to stdin | |
23 R --vanilla --slave $* < $infile |