Mercurial > repos > drosofff > msp_sr_bowtie_parser

changeset 5:aa3620d405b1 draft

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planemo upload for repository https://bitbucket.org/drosofff/gedtools/
author mvdbeek
date Thu, 11 Jun 2015 12:54:47 -0400
parents 2c7f42686440
children 385a8ada30c1
files sRbowtieParser.xml tool_dependencies.xml
diffstat 2 files changed, 9 insertions(+), 3 deletions(-) [+]
line wrap: on
line diff
--- a/sRbowtieParser.xml	Thu Jun 11 12:35:45 2015 -0400
+++ b/sRbowtieParser.xml	Thu Jun 11 12:54:47 2015 -0400
@@ -1,10 +1,10 @@
-<tool id="sRbowtieParser" name="Parse items in sRbowtie alignment" version="1.0.3">
+<tool id="sRbowtieParser" name="Parse items in sRbowtie alignment" version="1.0.4">
   <description></description>
   <requirements>
 	<requirement type="package" version="0.12.7">bowtie</requirement>
         <requirement type="package" version="1.2">samtools</requirement>
         <requirement type="package" version="0.7.7">pysam</requirement>
-        <requirement type="package" version="2.7">python</requirement>
+        <requirement type="package" version="1.9">numpy</requirement>
         <requirement type="package" version="0.14">scipy</requirement>
  </requirements>
 <command interpreter="python">
--- a/tool_dependencies.xml	Thu Jun 11 12:35:45 2015 -0400
+++ b/tool_dependencies.xml	Thu Jun 11 12:54:47 2015 -0400
@@ -9,7 +9,13 @@
     <package name="pysam" version="0.7.7">
       <repository changeset_revision="ca10c522f37e" name="package_pysam_0_7_7" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" />
     </package>
+    <package name="python" version="2.7">
+        <repository changeset_revision="44e7542c51e6" name="package_python_2_7" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" />
+    </package>
+    <package name="numpy" version="1.9">
+        <repository changeset_revision="507f3ab4e38d" name="package_python_2_7_numpy_1_9" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" />
+    </package>
     <package name="scipy" version="0.14">
-        <repository changeset_revision="145ba5a36683" name="package_python_2_7_scipy_0_14" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
+        <repository changeset_revision="145ba5a36683" name="package_python_2_7_scipy_0_14" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" />
     </package>
 </tool_dependency>