# HG changeset patch
# User mvdbeek
# Date 1460987574 14400
# Node ID 7b5e0fba8e74a36d74af854df19733353fb7b486
# Parent  bfeaf4415eba61818f434f1c670acfcc547e505e
planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/msp_sr_bowtie_parser commit 30a73e24eabb05f9d46150fd03471ff853579ad2-dirty

diff -r bfeaf4415eba -r 7b5e0fba8e74 sRbowtieParser.xml
--- a/sRbowtieParser.xml	Mon Apr 18 09:41:34 2016 -0400
+++ b/sRbowtieParser.xml	Mon Apr 18 09:52:54 2016 -0400
@@ -6,7 +6,7 @@
         <requirement type="package" version="1.9">numpy</requirement>
  </requirements>
 <command>
-        python sRbowtieParser.py
+        python $__tool_directory__/sRbowtieParser.py
 	          #if $refGenomeSource.genomeSource == "history":
                     --IndexSource $refGenomeSource.ownFile
          	    --ExtractDirective fastaSource