Mercurial > repos > dpryan79 > package_python_2_7_bwameth_0_20

comparison tool_dependencies.xml @ 1:18776a266ed9 draft

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author dpryan79
date Tue, 13 Sep 2016 07:52:51 -0400
parents cbb49b5bc43f
children 831f8397a424
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0:cbb49b5bc43f 1:18776a266ed9
16 <repository changeset_revision="a28e3c30828d" name="package_python_2_7_10" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu"> 16 <repository changeset_revision="a28e3c30828d" name="package_python_2_7_10" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu">
17 <package name="python" version="2.7.10" /> 17 <package name="python" version="2.7.10" />
18 </repository> 18 </repository>
19 </action> 19 </action>
20 <action type="shell_command">git clone https://github.com/brentp/bwa-meth</action> 20 <action type="shell_command">git clone https://github.com/brentp/bwa-meth</action>
21 <action type="shell_command">git reset --hard 7dfec747105b9fa2cf1678bf5f67e860a0155d0e</action> 21 <action type="shell_command">cd bwa-meth &amp;&amp; git reset --hard 7dfec747105b9fa2cf1678bf5f67e860a0155d0e</action>
22 <action type="set_environment"> 22 <action type="set_environment">
23 <environment_variable action="prepend_to" name="PATH">$INSTALL_DIR/bin</environment_variable> 23 <environment_variable action="prepend_to" name="PATH">$INSTALL_DIR/bin</environment_variable>
24 <environment_variable action="prepend_to" name="PYTHONPATH">$INSTALL_DIR</environment_variable> 24 <environment_variable action="prepend_to" name="PYTHONPATH">$INSTALL_DIR</environment_variable>
25 </action> 25 </action>
26 <action type="make_directory">$INSTALL_DIR/lib/python</action> 26 <action type="make_directory">$INSTALL_DIR/lib/python</action>