# HG changeset patch
# User dpryan79
# Date 1449134897 18000
# Node ID 2cc21210969f1d89ab3d61b12c783b8e748fa616
# Parent  fb99562582d75ac1079956e5839d6d41665dd209
Replace tool_dependencies.xml

diff -r fb99562582d7 -r 2cc21210969f tool_dependencies.xml
--- a/tool_dependencies.xml	Wed Dec 02 10:13:19 2015 -0500
+++ b/tool_dependencies.xml	Thu Dec 03 04:28:17 2015 -0500
@@ -4,50 +4,49 @@
         <repository changeset_revision="786e3000ca58" name="package_samtools_0_1_19" owner="devteam" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
     </package>
     <package name="numpy" version="1.9">
-        <repository changeset_revision="db045339112b" name="package_python_2_7_numpy_1_9" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
+        <repository changeset_revision="88d3bc8da3d9" name="package_python_2_7_numpy_1_9" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
     </package>
     <package name="matplotlib" version="1.4">
-        <repository changeset_revision="f05de70312d0" name="package_python_2_7_matplotlib_1_4" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
+        <repository changeset_revision="7f9e94628d10" name="package_python_2_7_matplotlib_1_4" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
     </package>
     <package name="scipy" version="0.14">
-        <repository changeset_revision="68c8bff2b07b" name="package_python_2_7_scipy_0_14" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
+        <repository changeset_revision="fe627de3acd5" name="package_python_2_7_scipy_0_14" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
     </package>
     <package name="pysam" version="0.8.3">
-        <repository changeset_revision="b6a9c72acd7e" name="package_python_2_7_pysam_0_8_3" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
+        <repository changeset_revision="f88a5f4ac6c1" name="package_python_2_7_pysam_0_8_3" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
     </package>
     <package name="bx-python" version="0.7.2">
-        <repository changeset_revision="0fc815b1609d" name="package_python_2_7_bx_python_0_7" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
+        <repository changeset_revision="a6b1f4f37b64" name="package_python_2_7_bx_python_0_7" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
     </package>
     <package name="ucsc_tools" version="312">
         <repository changeset_revision="ceda74761368" name="package_ucsc_tools_312" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
     </package>
-    <!-- The updated iuc versions aren't in the toolshed yet -->
     <package name="pybigwig" version="0.1.9">
-        <repository changeset_revision="7af2c2f2ed3b" name="package_python_2_7_pybigwig" owner="dpryan79" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
+        <repository changeset_revision="8bb46d8235a0" name="package_python_2_7_10_pybigwig_0_1_9" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
     </package>
     <package name="python" version="2.7.10">
-        <repository changeset_revision="a9a28015c0ce" name="test_package_python_2_7_10" owner="dpryan79" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
+        <repository changeset_revision="59d69069d35d" name="package_python_2_7_10" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
     </package>
     <package name="deepTools" version="2.0.0">
         <install version="1.0">
             <actions>
                 <action type="setup_python_environment">
-                    <repository changeset_revision="a9a28015c0ce" name="test_package_python_2_7_10" owner="dpryan79" toolshed="https://testtoolshed.g2.bx.psu.edu">
+                    <repository changeset_revision="59d69069d35d" name="package_python_2_7_10" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu">
                         <package name="python" version="2.7.10" />
                     </repository>
-                    <repository changeset_revision="b6a9c72acd7e" name="package_python_2_7_pysam_0_8_3" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu">
+                    <repository changeset_revision="f88a5f4ac6c1" name="package_python_2_7_pysam_0_8_3" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu">
                         <package name="pysam" version="0.8.3" />
                     </repository>
-                    <repository changeset_revision="db045339112b" name="package_python_2_7_numpy_1_9" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu">
+                    <repository changeset_revision="88d3bc8da3d9" name="package_python_2_7_numpy_1_9" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu">
                         <package name="numpy" version="1.9" />
                     </repository>
-                    <repository changeset_revision="f05de70312d0" name="package_python_2_7_matplotlib_1_4" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu">
+                    <repository changeset_revision="7f9e94628d10" name="package_python_2_7_matplotlib_1_4" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu">
                         <package name="matplotlib" version="1.4" />
                     </repository>
-                    <repository changeset_revision="68c8bff2b07b" name="package_python_2_7_scipy_0_14" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu">
+                    <repository changeset_revision="fe627de3acd5" name="package_python_2_7_scipy_0_14" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu">
                         <package name="scipy" version="0.14" />
                     </repository>
-                    <repository changeset_revision="0fc815b1609d" name="package_python_2_7_bx_python_0_7" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu">
+                    <repository changeset_revision="a6b1f4f37b64" name="package_python_2_7_bx_python_0_7" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu">
                         <package name="bx-python" version="0.7.2" />
                     </repository>
                     <repository changeset_revision="786e3000ca58" name="package_samtools_0_1_19" owner="devteam" toolshed="https://testtoolshed.g2.bx.psu.edu">
@@ -56,7 +55,7 @@
                     <repository changeset_revision="ceda74761368" name="package_ucsc_tools_312" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu">
                         <package name="ucsc_tools" version="312" />
                     </repository>
-                    <repository changeset_revision="7af2c2f2ed3b" name="package_python_2_7_pybigwig" owner="dpryan79" toolshed="https://testtoolshed.g2.bx.psu.edu">
+                    <repository changeset_revision="8bb46d8235a0" name="package_python_2_7_10_pybigwig_0_1_9" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu">
                         <package name="pybigwig" version="0.1.9" />
                     </repository>
                     <package>https://github.com/dpryan79/deepTools/archive/1.6.1.tar.gz</package>