# HG changeset patch
# User dpryan79
# Date 1492526853 14400
# Node ID 2c818c851713f5406c5607feae87d48e0ea07f63

Uploaded

diff -r 000000000000 -r 2c818c851713 data_manager_conf.xml
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/data_manager_conf.xml	Tue Apr 18 10:47:33 2017 -0400
@@ -0,0 +1,24 @@
+<?xml version="1.0"?>
+<data_managers>
+    <data_manager tool_file="data_manager/rna_star_index_builder.xml" id="rna_star_index_builder" version="0.0.3">
+        <data_table name="rnastar_index2">
+            <output>
+                <column name="value" />
+                <column name="dbkey" />
+                <column name="name" />
+                <column name="path" output_ref="out_file" >
+                    <move type="directory" relativize_symlinks="True">
+                        <!-- <source>${path}</source>
+                            out_file.extra_files_path is used as base by default
+                            if no source, eg for type=directory, then refers to base 
+                        -->
+                        <target base="${GALAXY_DATA_MANAGER_DATA_PATH}">${dbkey}/rnastar_index2/${value}</target>
+                    </move>
+                    <value_translation>${GALAXY_DATA_MANAGER_DATA_PATH}/${dbkey}/rnastar_index2/${value}/${path}</value_translation>
+                    <value_translation type="function">abspath</value_translation>
+                </column>
+                <column name="withGTF" />
+            </output>
+        </data_table>
+    </data_manager>
+</data_managers>