Mercurial > repos > dpryan79 > data_manager_bwameth_index_builder
diff tool-data/bwameth_indexes.loc.sample @ 0:a801458261bb draft
Uploaded
| author | dpryan79 |
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| date | Thu, 15 Sep 2016 04:59:28 -0400 |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/tool-data/bwameth_indexes.loc.sample Thu Sep 15 04:59:28 2016 -0400 @@ -0,0 +1,15 @@ +# This is a sample file distributed with Galaxy that is used to define a +# list of bwa-meth indices, using three columns tab separated: +# +# <unique_build_id> <dbkey> <display_name> <genome_fasta_file_path> +# +# An index can be created with the following command: +# +# bwameth.py index /some/path/genome.fa +# +# "/some/path/genome.fa" would then be the last column in the line +# If this were for the mm10 mouse genome, the resulting entry would look like: +# +#mm9 mm9 Mouse (mm9) /some/path/genome.fa +# +#