comparison tool-data/bwameth_indexes.loc.sample @ 20:5924e53ef39c draft default tip

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author dpryan79
date Thu, 15 Sep 2016 04:57:12 -0400
parents 596690559dab
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19:54c3b261783b 20:5924e53ef39c
1 # This is a sample file distributed with Galaxy that is used to define a 1 # This is a sample file distributed with Galaxy that is used to define a
2 # list of bwa-meth indices, using three columns tab separated: 2 # list of bwa-meth indices, using three columns tab separated:
3 # 3 #
4 # bwameth_index_id\tSome description text\t/path/to/genome.fasta 4 # <unique_build_id> <dbkey> <display_name> <genome_fasta_file_path>
5 # 5 #
6 # An index can be created with the following command: 6 # An index can be created with the following command:
7 # 7 #
8 # bwameth.py index /some/path/genome.fa 8 # bwameth.py index /some/path/genome.fa
9 # 9 #
10 # "/some/path/genome.fa" would then be the last column in the line 10 # "/some/path/genome.fa" would then be the last column in the line
11 # If this were for the mm10 mouse genome, the resulting entry would look like:
12 #
13 #mm9 mm9 Mouse (mm9) /some/path/genome.fa
14 #
15 #