view test-data/amplicon_sequevars_to_dict/amplicon_sequevars_without_safelist.txt @ 1:71bc4fd01351 draft default tip

planemo upload for repository https://github.com/DiDigsDNA/amplicon_sequevars_to_dict commit ca00fa6b41cfb8f6a27901792a4e4d3fc3e1878b
author diane
date Fri, 07 Sep 2018 15:22:34 -0400
parents
children
line wrap: on
line source

---------------------------------------------------------------------------
RESULTS OF SEARCH FOR EXACT MATCHES TO OLIGONUCLEOTIDES IN QUERY SEQUENCES:
---------------------------------------------------------------------------

Analysis as of: Thu Sep  6 18:19:51 2018


---------------------------------------------------------------------------
16 Different Amplicon Sequevars Found: test-data/amplicons.fasta 



36 Records in Sequevar: GACCAATCTTGTCACCTCTGACTAAGGGAATTTTAGGATTTGTGTTCACGCTCACCGTGCCCAGTGAGCGAGGACTGCAGCGTAGACGCTTTATCCAAAATGCCC
	KY925925
	KY925930
	KY925952
	KY925960
	KY925968
	KY926011
	KY926047
	KY926053
	KY926055
	KY926082
	KY926097
	KY926123
	KY926125
	KY926132
	KY950197
	KY950209
	KY950219
	MF593496
	MF593504
	MF593512
	MF593520
	MF593528
	MF593533
	MF593538
	MF593544
	MF593549
	MF593557
	MF593562
	MF593570
	MF593578
	MF593586
	MF593594
	MF593602
	MF593610
	MF593615
	MF593623

23 Records in Sequevar: GACCAATTCTGTCACCTCTGACTAAGGGGATTTTAGGGTTTGTTTTCACGCTCACCGTGCCCAGTGAGCGAGGACTGCAGCGTAGACGCTTTGTCCAAAATGCCC
	KY925966
	KY925996
	KY926140
	MF441140
	MF441142
	MF441143
	MF441144
	MF441146
	MF441150
	MF441151
	MF441153
	MF441156
	MF441157
	MF441163
	MF441164
	MF441165
	MF441166
	MF441167
	MF441168
	MF441169
	MF441170
	MF441172
	MF441173

1 Records in Sequevar: GACCAATTCTGTCACCTCTGACTAAGGGGATTTTGGGGTTTGTGTTCACGCTCACCGTGCCAAGTGAGCGAGGACTGCAGCGTAGACGCTTTGTCCAAAATGCCC
	KY925981

2 Records in Sequevar: GACCAATCTTGTCACCTCTGACTAAGGGAATTTTAGGATTTGTGTTCACGCTCACCGTGCCCAGTGAGCGAGGACTGCAGCGTAGACGCTTTGTCCAAAATGCCC
	KY926040
	KY926049

1 Records in Sequevar: GACCAATCTTGTCACCTCTGACTAAGGGAATTTTAGGATTTGTGTTCACGCTCACAGTGCCCAGTGAGCGAGGACTGCAGCGTAGACGCTTTATCCAAAATGCCC
	KY926095

4 Records in Sequevar: GACCAATTCTGTCACCTCTGACTAAGGGGATTTTGGGGTTTGTGTTCACGCTCACCGTGCCCAGTGAGCGAGGACTGCAGCGTAGACGCTTTGTCCAAAATGCCC
	KY926106
	MF441141
	MF441149
	MF441161

5 Records in Sequevar: GACCAATTCTGTCACCTTTGACTAAGGGGATTTTAGGGTTTGTTTTCACGCTCACCGTGCCCAGTGAGCGAGGACTGCAGCGTAGACGCTTTGTCCAAAATGCCC
	KY950187
	KY950217
	MF599433
	MF599434
	MF599438

4 Records in Sequevar: GACCAATCCTGTCACCTCTGACTAAGGGGATTTTAGGGTTTGTGTTCACGCTCACCGTGCCCAGTGAGCGAGGACTGCAGCGTAGACGGTTTGTCCAAAACGCCC
	MF039637
	MF370249
	MF370253
	MF370257

1 Records in Sequevar: GACCAATCCTGTCACCTCTGACTAAGGGGATTTTAGGATTTGTGTTCACGCTCACCGTGCCCAGTGAGCGGGGACTGCAGCGTAGACGCTTTGTCCAAAATGCTC
	MF039638

10 Records in Sequevar: GACCAATTCTGTCACCTCTGACTAAGGGGATTTTGGGATTTGTGTTCACGCTCACCGTGCCCAGTGAGCGAGGACTGCAGCGTAGACGCTTTGTCCAAAATGCCC
	MF441145
	MF441147
	MF441148
	MF441152
	MF441154
	MF441155
	MF441158
	MF441159
	MF441162
	MF441171

1 Records in Sequevar: GACCAATTCTGTCACCTCTGACTAAGGGGATTTTAGGGTTTGTTTTCACGCTCACCGTGCCCAGTGAGCGAGGACTGCAGCGTAGACGTTTTGTCCAAAATGCCC
	MF441160

1 Records in Sequevar: GACCAATTCTGTCACCTCTGACTAAGGGGATTTTGGGGTTTGTGTTCACGCTCACCGTGCCCAGTGAGCGAGGACTGCAGCGTAGACGCTTTGTTCAAAATGCCC
	MF441174

1 Records in Sequevar: GACCAATCTTGTCACCTCTGACTAAGGGAATTTTAGGATTTGTGTTCACGCTCACCGTGCCCAGTGAACGAGGACTGCAGCGTAGACGCTTTATCCAAAATGCCC
	MF593488

7 Records in Sequevar: GACCAATTCTGTCACCTTTGACTAAGGGGATTTTAGGGTTTGTTTTCACGCTCACCGTGCCAAGTGAGCGAGGACTGCAGCGTAGACGCTTTGTCCAAAATGCCC
	MF599435
	MF599437
	MF599439
	MF599440
	MF599441
	MF599442
	MF599443

1 Records in Sequevar: GACCAATTCTGTCACCTTTGACTAAGGGGATTTTAGGGTTTGTCTTCACGCTCACCGTGCCAAGTGAGCGAGGACTGCAGCGTAGACGCTTTGTCCAAAATGCCC
	MF599436

1 Records in Sequevar: GACCAATCTTGTCACCCCTGACTAAGGGAATTTTAGGATTTGTGTTCACGCTCACCGTGCCCAGTGAGCGAGGACTGCAGCGTAGACGCTTTGTCCAAAATGCCC
	MF629795
---------------------------------------------------------------------------

END OF RESULTS

Search Results (this file): amplicon_sequevars_without_safelist.txt
Fasta sequences for analysis: amplicon_sequevars_without_safelist.fasta