# HG changeset patch # User dfornika # Date 1561401099 14400 # Node ID 746cfbee7afd1adedc2161d03b30c6a5c74ab452 # Parent c946718c1328d065f3f0749341382ac09ea71922 planemo upload for repository https://github.com/dfornika/galaxytools/tree/master/data_managers/data_manager_build_mob_suite_database/ commit ded3b42d8a746eac2973cc17826160e43ac11186-dirty diff -r c946718c1328 -r 746cfbee7afd data_manager/mob_suite_build_database.py --- a/data_manager/mob_suite_build_database.py Mon Jun 24 14:25:41 2019 -0400 +++ b/data_manager/mob_suite_build_database.py Mon Jun 24 14:31:39 2019 -0400 @@ -43,9 +43,9 @@ subprocess.check_call(['mob_cluster'] + mob_cluster_args_list, cwd=target_directory) - shutil.copyfile( - os.path.join(database_path, 'references_updated.fasta'), - os.path.join(database_path, 'ncbi_plasmid_full_seqs.fas') + os.rename( + os.path.join(target_directory, database_path, 'references_updated.fasta'), + os.path.join(target_directory, database_path, 'ncbi_plasmid_full_seqs.fas') ) print("Sleeping for 20s")