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view data_manager/mob_suite_build_database.xml @ 9:426c12575896 draft

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planemo upload for repository https://github.com/dfornika/galaxytools/tree/master/data_managers/data_manager_build_mob_suite_database/ commit ecc87b04e2f486f941c6eb4746738690db3a9e94-dirty
author dfornika
date Fri, 21 Jun 2019 20:20:26 -0400
parents 34171fd6daed
children c0f35fbf421f
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<?xml version="1.0"?>
<tool id="mob_suite_build_database" name="MOB-Suite Database Builder" tool_type="manage_data" version="1.4.9.1">
    <description>database builder</description>
    <requirements>
        <requirement type="package" version="1.4.9.1">mob_suite</requirement>
    </requirements>
    <version_command>echo '1.4.9.1'</version_command>
    <command detect_errors="exit_code">
    <![CDATA[
        python '$__tool_directory__/mob_suite_build_database.py'
          '${out_file}'
          --threads \${GALAXY_SLOTS:-1}
          --input '${input}'
	  --database-name '${database_name}'
    ]]>
    </command>
    <inputs>
        <param name="input" type="data" multiple="true" label="Plasmid Assemblies" />
        <param name="database_name" type="string" label="Database Name" />
    </inputs>
    <outputs>
        <data name="out_file" format="data_manager_json" />
    </outputs>
    <help>
    </help>
    <citations>
        <citation type="doi">10.1099/mgen.0.000206</citation>
    </citations>
</tool>