Mercurial > repos > devteam > vcfvcfintersect

annotate test-data/vcfvcfintersect-input2.vcf @ 0:d3b62e656435 draft

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planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/vcflib/vcfvcfintersect commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
author devteam
date Mon, 09 Nov 2015 12:34:50 -0500
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d3b62e656435 planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/vcflib/vcfvcfintersect commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
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1 ##fileformat=VCFv4.1
d3b62e656435 planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/vcflib/vcfvcfintersect commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
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2 ##fileDate=20140610
d3b62e656435 planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/vcflib/vcfvcfintersect commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
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3 ##source=Dan
d3b62e656435 planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/vcflib/vcfvcfintersect commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
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4 ##reference=file:///galaxy/data/phiX/sam_index/phiX.fa
d3b62e656435 planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/vcflib/vcfvcfintersect commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
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5 ##filter="AF > .001"
d3b62e656435 planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/vcflib/vcfvcfintersect commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
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6 ##INFO=<ID=AC,Number=A,Type=Integer,Description="Allele count in genotypes, for each ALT allele, in the same order as listed">
d3b62e656435 planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/vcflib/vcfvcfintersect commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
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7 ##INFO=<ID=AF,Number=A,Type=Float,Description="Allele Frequency, for each ALT allele, in the same order as listed">
d3b62e656435 planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/vcflib/vcfvcfintersect commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
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8 ##FORMAT=<ID=GT,Number=1,Type=String,Description="Genotype">
d3b62e656435 planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/vcflib/vcfvcfintersect commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
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9 ##FORMAT=<ID=AC,Number=.,Type=Integer,Description="Allele count in genotypes, for each ALT allele, in the same order as listed">
d3b62e656435 planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/vcflib/vcfvcfintersect commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
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10 ##FORMAT=<ID=AF,Number=.,Type=Float,Description="Allele Frequency, for each ALT allele, in the same order as listed">
d3b62e656435 planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/vcflib/vcfvcfintersect commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
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11 ##FORMAT=<ID=NC,Number=.,Type=String,Description="Nucleotide and indel counts">
d3b62e656435 planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/vcflib/vcfvcfintersect commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
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12 #CHROM POS ID REF ALT QUAL FILTER INFO FORMAT groupA groupB
d3b62e656435 planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/vcflib/vcfvcfintersect commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
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13 phiX174 1503 . A C 0 . AC=2;AF=0.0454545454545 GT:AC:AF:NC 0:0:0:A=20,C=1, 0:2:0.0833333333333:A=22,C=2,
d3b62e656435 planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/vcflib/vcfvcfintersect commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
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14 phiX174 1536 . A C 0 . AC=3;AF=0.0545454545455 GT:AC:AF:NC 0:3:0.111111111111:A=24,C=3, 0:0:0:A=28,C=1,
d3b62e656435 planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/vcflib/vcfvcfintersect commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
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15 phiX174 1541 . T G 0 . AC=2;AF=0.0363636363636 GT:AC:AF:NC 0:2:0.0740740740741:T=25,G=2, 0:0:0:T=28,
d3b62e656435 planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/vcflib/vcfvcfintersect commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
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16 phiX174 1553 . A G 0 . AC=2;AF=0.0408163265306 GT:AC:AF:NC 0:2:0.0952380952381:A=19,C=1,G=2, 0:0:0:A=28,
d3b62e656435 planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/vcflib/vcfvcfintersect commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
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17 phiX174 1566 . C G 0 . AC=2;AF=0.0307692307692 GT:AC:AF:NC 0:0:0:C=30,T=1, 0:2:0.0571428571429:C=33,G=2,
d3b62e656435 planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/vcflib/vcfvcfintersect commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
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18 phiX174 1572 . T G 0 . AC=2;AF=0.03125 GT:AC:AF:NC 0:2:0.0625:T=30,G=2, 0:0:0:T=32,
d3b62e656435 planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/vcflib/vcfvcfintersect commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
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19 phiX174 1574 . G C 0 . AC=3;AF=0.0441176470588 GT:AC:AF:NC 0:3:0.0882352941176:C=3,G=31, 0:0:0:G=34,
d3b62e656435 planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/vcflib/vcfvcfintersect commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
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20 phiX174 1575 . A C 0 . AC=2;AF=0.0294117647059 GT:AC:AF:NC 0:2:0.0571428571429:A=33,C=2, 0:0:0:A=33,T=1,
d3b62e656435 planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/vcflib/vcfvcfintersect commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
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21 phiX174 1577 . A C 0 . AC=3;AF=0.0441176470588 GT:AC:AF:NC 0:0:0:A=35, 0:3:0.0909090909091:A=30,C=3,
d3b62e656435 planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/vcflib/vcfvcfintersect commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
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22 phiX174 1581 . T G 0 . AC=2;AF=0.0285714285714 GT:AC:AF:NC 0:2:0.0555555555556:C=1,T=34,G=2, 0:0:0:T=34,G=1,
d3b62e656435 planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/vcflib/vcfvcfintersect commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
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23 phiX174 1591 . A C 0 . AC=3;AF=0.037037037037 GT:AC:AF:NC 0:3:0.0789473684211:A=35,C=3, 0:0:0:A=43,C=1,
d3b62e656435 planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/vcflib/vcfvcfintersect commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
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24 phiX174 1597 . T G 0 . AC=2;AF=0.025641025641 GT:AC:AF:NC 0:2:0.0606060606061:T=31,G=2, 0:0:0:C=1,T=45,
d3b62e656435 planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/vcflib/vcfvcfintersect commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
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25 phiX174 1603 . T G 0 . AC=2;AF=0.0243902439024 GT:AC:AF:NC 0:2:0.0625:T=30,G=2, 0:0:0:T=50,
d3b62e656435 planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/vcflib/vcfvcfintersect commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
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26 phiX174 1606 . T G 0 . AC=2;AF=0.0243902439024 GT:AC:AF:NC 0:2:0.0666666666667:A=1,C=1,T=28,G=2, 0:0:0:T=52,
d3b62e656435 planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/vcflib/vcfvcfintersect commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
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27 phiX174 1611 . A C 0 . AC=2;AF=0.0243902439024 GT:AC:AF:NC 0:2:0.0769230769231:A=24,C=2, 0:0:0:A=56,C=1,
d3b62e656435 planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/vcflib/vcfvcfintersect commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
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28 phiX174 1613 . A G 0 . AC=2;AF=0.0240963855422 GT:AC:AF:NC 0:0:0:A=25,C=1,G=1, 0:2:0.0344827586207:A=56,G=2,
d3b62e656435 planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/vcflib/vcfvcfintersect commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
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29 phiX174 1618 . C A 0 . AC=2;AF=0.0229885057471 GT:AC:AF:NC 0:2:0.0666666666667:A=2,C=28,G=1, 0:0:0:A=1,C=57,
d3b62e656435 planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/vcflib/vcfvcfintersect commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
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30 phiX174 1619 . C A 0 . AC=2;AF=0.0229885057471 GT:AC:AF:NC 0:2:0.0666666666667:A=2,C=28, 0:0:0:C=57,
d3b62e656435 planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/vcflib/vcfvcfintersect commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
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31 phiX174 1621 . A C 0 . AC=3;AF=0.0352941176471 GT:AC:AF:NC 0:0:0:A=31,T=1,G=1, 0:3:0.0555555555556:A=51,C=3,
d3b62e656435 planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/vcflib/vcfvcfintersect commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
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32 phiX174 1622 . G T 0 . AC=2;AF=0.0224719101124 GT:AC:AF:NC 0:0:0:A=1,G=35, 0:2:0.037037037037:T=2,G=52,
d3b62e656435 planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/vcflib/vcfvcfintersect commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
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33 phiX174 1624 . A G 0 . AC=2;AF=0.0235294117647 GT:AC:AF:NC 0:2:0.0555555555556:A=34,T=1,G=2, 0:0:0:A=49,
d3b62e656435 planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/vcflib/vcfvcfintersect commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
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34 phiX174 1627 . T G,C 0 . AC=2,2;AF=0.0246913580247,0.0246913580247 GT:AC:AF:NC 0:0,0:0,0:T=37,G=1, 0:2,2:0.0454545454545,0.0454545454545:C=2,T=40,G=2,
d3b62e656435 planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/vcflib/vcfvcfintersect commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
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35 phiX174 1630 . T G 0 . AC=2;AF=0.025641025641 GT:AC:AF:NC 0:2:0.0526315789474:C=1,T=36,G=2, 0:0:0:T=40,
d3b62e656435 planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/vcflib/vcfvcfintersect commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
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36 phiX174 1632 . A C 0 . AC=2;AF=0.0246913580247 GT:AC:AF:NC 0:2:0.05:A=38,C=2, 0:0:0:A=41,
d3b62e656435 planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/vcflib/vcfvcfintersect commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
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37 phiX174 1634 . T G 0 . AC=4;AF=0.0493827160494 GT:AC:AF:NC 0:2:0.047619047619:C=1,T=40,G=2, 0:2:0.0512820512821:T=37,G=2,
d3b62e656435 planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/vcflib/vcfvcfintersect commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
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38 phiX174 1635 . T G 0 . AC=3;AF=0.0365853658537 GT:AC:AF:NC 0:3:0.0714285714286:T=39,G=3, 0:0:0:T=40,
d3b62e656435 planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/vcflib/vcfvcfintersect commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
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39 phiX174 1639 . G A 0 . AC=3;AF=0.0405405405405 GT:AC:AF:NC 0:3:0.075:A=3,T=1,G=37, 0:0:0:G=34,
d3b62e656435 planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/vcflib/vcfvcfintersect commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
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40 phiX174 1645 . T G 0 . AC=2;AF=0.027027027027 GT:AC:AF:NC 0:2:0.0425531914894:T=45,G=2, 0:0:0:T=27,G=1,
d3b62e656435 planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/vcflib/vcfvcfintersect commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
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41 phiX174 1647 . A T,G,C 0 . AC=2,2,2;AF=0.0253164556962,0.0253164556962,0.0253164556962 GT:AC:AF:NC 0:0,2,2:0,0.0384615384615,0.0384615384615:A=48,C=2,G=2, 0:2,0,0:0.0740740740741,0,0:A=25,T=2,
d3b62e656435 planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/vcflib/vcfvcfintersect commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
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42 phiX174 1652 . G A 0 . AC=2;AF=0.0240963855422 GT:AC:AF:NC 0:2:0.037037037037:A=2,G=52, 0:0:0:G=29,
d3b62e656435 planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/vcflib/vcfvcfintersect commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
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43 phiX174 1656 . T G 0 . AC=3;AF=0.0348837209302 GT:AC:AF:NC 0:3:0.0555555555556:T=51,G=3, 0:0:0:T=32,G=1,
d3b62e656435 planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/vcflib/vcfvcfintersect commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
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44 phiX174 1658 . A C 0 . AC=2;AF=0.0240963855422 GT:AC:AF:NC 0:2:0.04:A=48,C=2, 0:0:0:A=33,
d3b62e656435 planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/vcflib/vcfvcfintersect commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
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45 phiX174 1659 . T G 0 . AC=3;AF=0.0365853658537 GT:AC:AF:NC 0:3:0.0625:C=1,T=45,G=3, 0:0:0:T=34,
d3b62e656435 planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/vcflib/vcfvcfintersect commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
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46 phiX174 1663 . T G 0 . AC=4;AF=0.0454545454545 GT:AC:AF:NC 0:0:0:A=1,T=53, 0:4:0.114285714286:T=31,G=4,
d3b62e656435 planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/vcflib/vcfvcfintersect commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
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47 phiX174 1665 . C A 0 . AC=2;AF=0.0212765957447 GT:AC:AF:NC 0:2:0.0384615384615:A=2,C=50,G=1, 0:0:0:C=42,
d3b62e656435 planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/vcflib/vcfvcfintersect commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
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48 phiX174 1670 . G C 0 . AC=2;AF=0.0224719101124 GT:AC:AF:NC 0:0,2:0,0.0408163265306:A=1,C=2,T=1,G=47, 0:0,0:0,0:T=1,G=40,
d3b62e656435 planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/vcflib/vcfvcfintersect commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
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49 phiX174 1671 . G T 0 . AC=2;AF=0.0212765957447 GT:AC:AF:NC 0:2:0.0384615384615:C=1,T=2,G=50, 0:0:0:G=42,
d3b62e656435 planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/vcflib/vcfvcfintersect commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
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50 phiX174 1672 . A G 0 . AC=3;AF=0.0315789473684 GT:AC:AF:NC 0:3:0.0545454545455:A=52,G=3, 0:0:0:A=40,T=1,
d3b62e656435 planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/vcflib/vcfvcfintersect commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
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51 phiX174 1673 . G T 0 . AC=2;AF=0.0212765957447 GT:AC:AF:NC 0:2:0.0377358490566:C=1,T=2,G=51, 0:0:0:G=41,
d3b62e656435 planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/vcflib/vcfvcfintersect commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
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52 phiX174 1674 . G T 0 . AC=4;AF=0.04 GT:AC:AF:NC 0:4:0.0714285714286:T=4,G=52, 0:0:0:G=44,
d3b62e656435 planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/vcflib/vcfvcfintersect commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
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53 phiX174 1677 . A C 0 . AC=3;AF=0.031914893617 GT:AC:AF:NC 0:3:0.0566037735849:A=50,C=3,N=1, 0:0:0:A=41,
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104 phiX174 1860 . T G 0 . AC=2;AF=0.0377358490566 GT:AC:AF:NC 0:0:0:A=1,T=20, 0:2:0.0606060606061:T=31,G=2,
d3b62e656435 planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/vcflib/vcfvcfintersect commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
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105 phiX174 1863 . C G 0 . AC=2;AF=0.0384615384615 GT:AC:AF:NC 0:2:0.105263157895:A=1,C=17,G=2, 0:0:0:C=33,
d3b62e656435 planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/vcflib/vcfvcfintersect commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
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106 phiX174 1866 . T G 0 . AC=2;AF=0.04 GT:AC:AF:NC 0:0:0:T=19,G=1, 0:2:0.0645161290323:T=29,G=2,
d3b62e656435 planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/vcflib/vcfvcfintersect commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
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107 phiX174 1875 . T A 0 . AC=2;AF=0.0377358490566 GT:AC:AF:NC 0:2:0.0952380952381:A=2,T=19, 0:0:0:T=32,G=1,
d3b62e656435 planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/vcflib/vcfvcfintersect commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
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108 phiX174 1876 . T G 0 . AC=3;AF=0.0588235294118 GT:AC:AF:NC 0:3:0.157894736842:C=1,T=16,G=3, 0:0:0:T=32,G=1,
d3b62e656435 planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/vcflib/vcfvcfintersect commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
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109 phiX174 1882 . T G 0 . AC=2;AF=0.0377358490566 GT:AC:AF:NC 0:2:0.105263157895:T=17,G=2, 0:0:0:T=34,
d3b62e656435 planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/vcflib/vcfvcfintersect commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
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110 phiX174 1889 . A C 0 . AC=2;AF=0.04 GT:AC:AF:NC 0:2:0.0869565217391:A=21,C=2, 0:0:0:A=27,
d3b62e656435 planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/vcflib/vcfvcfintersect commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
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111 phiX174 1913 . G C 0 . AC=2;AF=0.04 GT:AC:AF:NC 0:0:0:G=27, 0:2:0.0869565217391:C=2,G=21,
d3b62e656435 planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/vcflib/vcfvcfintersect commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
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112 phiX174 1915 . T G 0 . AC=2;AF=0.0425531914894 GT:AC:AF:NC 0:0:0:A=1,T=24, 0:2:0.0869565217391:T=21,G=2,
d3b62e656435 planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/vcflib/vcfvcfintersect commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
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113 phiX174 1917 . A T 0 . AC=2;AF=0.0444444444444 GT:AC:AF:NC 0:2,0:0.0833333333333,0:A=22,T=2,G=1, 0:0,0:0,0:A=21,G=1,
d3b62e656435 planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/vcflib/vcfvcfintersect commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
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114 phiX174 1930 . T A 0 . AC=2;AF=0.0526315789474 GT:AC:AF:NC 0:2:0.0909090909091:A=2,T=20, 0:0:0:T=16,
d3b62e656435 planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/vcflib/vcfvcfintersect commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
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115 phiX174 1934 . A C 0 . AC=2;AF=0.0512820512821 GT:AC:AF:NC 0:2:0.0952380952381:A=19,C=2,T=1, 0:0:0:A=18,C=1,
d3b62e656435 planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/vcflib/vcfvcfintersect commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
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116 phiX174 1940 . A C 0 . AC=2;AF=0.046511627907 GT:AC:AF:NC 0:2:0.0952380952381:A=19,C=2, 0:0:0:A=22,C=1,
d3b62e656435 planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/vcflib/vcfvcfintersect commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
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117 phiX174 1942 . T G 0 . AC=2;AF=0.047619047619 GT:AC:AF:NC 0:0:0:T=19, 0:2:0.0869565217391:T=21,G=2,
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118 phiX174 1945 . T G 0 . AC=3;AF=0.0769230769231 GT:AC:AF:NC 0:0:0:T=15,G=1, 0:3:0.125:T=21,G=3,
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119 phiX174 1954 . T C 0 . AC=2;AF=0.0625 GT:AC:AF:NC 0:0,0:0,0:T=12,G=1, 0:0,2:0,0.1:C=2,T=18,G=1,
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120 phiX174 1959 . T G 0 . AC=2;AF=0.0555555555556 GT:AC:AF:NC 0:2:0.153846153846:T=11,G=2, 0:0:0:T=23,
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121 phiX174 1994 . A C 0 . AC=2;AF=0.0512820512821 GT:AC:AF:NC 0:2:0.153846153846:A=11,C=2, 0:0:0:A=26,
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122 phiX174 1998 . A G 0 . AC=2;AF=0.05 GT:AC:AF:NC 0:2:0.142857142857:A=12,G=2, 0:0:0:A=26,