# HG changeset patch
# User devteam
# Date 1348769446 14400
# Node ID 515163fbe70f8cf2bf3be6b7b31a1e05fb5f5b06
# Parent  d8bd4326dc3a8a8c83c1db327f7337bfd8898eab
Uploaded

diff -r d8bd4326dc3a -r 515163fbe70f snpeff_with_dep-244c09911d7a/tool_dependencies.xml
--- a/snpeff_with_dep-244c09911d7a/tool_dependencies.xml	Thu Sep 27 13:40:17 2012 -0400
+++ b/snpeff_with_dep-244c09911d7a/tool_dependencies.xml	Thu Sep 27 14:10:46 2012 -0400
@@ -8,7 +8,6 @@
                     <source_directory>.</source_directory>
                     <destination_directory>$INSTALL_DIR</destination_directory>
                 </action>
-
                 <action type="set_environment">
                     <environment_variable name="JAVA_JAR_PATH" action="prepend_to">$INSTALL_DIR/snpEff</environment_variable>
                 </action>
@@ -20,21 +19,4 @@
         <readme>
         </readme>
     </package>
-    <package name="SnpSift" version="1.7">
-        <install version="1.0">
-            <actions>
-                <action type="shell_command">mkdir SnpSift; cd SnpSift; wget http://sourceforge.net/projects/snpeff/files/SnpSift_v1_7.jar</action>
-                <action type="move_directory_files">
-                    <source_directory>.</source_directory>
-                    <destination_directory>$INSTALL_DIR</destination_directory>
-                </action>
-                <action type="set_environment">
-                    <environment_variable name="JAVA_JAR_PATH" action="prepend_to">$INSTALL_DIR/SnpSift</environment_variable>
-                </action>
-            </actions>
-        </install>
-        <readme>
-        </readme>
-    </package>
-</tool_dependency>
-
+</tool_dependency>
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