# HG changeset patch
# User devteam
# Date 1444755387 14400
# Node ID cc56fc603e53ccefd506e0709da516a71205ad55
# Parent  cd6eb75c9819b29bee432b0e2b3fca84128c1b3b
planemo upload commit 33927a87ba2eee9bf0ecdd376a66241b17b3d734

diff -r cd6eb75c9819 -r cc56fc603e53 macros.xml
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/macros.xml	Tue Oct 13 12:56:27 2015 -0400
@@ -0,0 +1,70 @@
+<macros>
+    <xml name="requirements">
+        <requirements>
+            <requirement type="package" version="1.2">samtools</requirement>
+            <yield/>
+        </requirements>
+    </xml>
+    <xml name="citations">
+        <citations>
+            <citation type="bibtex">
+                @misc{SAM_def,
+                title={Definition of SAM/BAM format},
+                url = {https://samtools.github.io/hts-specs/SAMv1.pdf},}
+            </citation>
+            <citation type="doi">10.1093/bioinformatics/btp352</citation>
+            <citation type="doi">10.1093/bioinformatics/btr076</citation>
+            <citation type="doi">10.1093/bioinformatics/btr509</citation>
+            <citation type="bibtex">
+                @misc{Danecek_et_al,
+                Author={Danecek, P., Schiffels, S., Durbin, R.},
+                title={Multiallelic calling model in bcftools (-m)},
+                url = {http://samtools.github.io/bcftools/call-m.pdf},}
+            </citation>
+            <citation type="bibtex">
+                @misc{Durbin_VCQC,
+                Author={Durbin, R.},
+                title={Segregation based metric for variant call QC},
+                url = {http://samtools.github.io/bcftools/rd-SegBias.pdf},}
+            </citation>
+            <citation type="bibtex">
+                @misc{Li_SamMath,
+                Author={Li, H.},
+                title={Mathematical Notes on SAMtools Algorithms},
+                url = {http://www.broadinstitute.org/gatk/media/docs/Samtools.pdf},}
+            </citation>
+            <citation type="bibtex">
+                @misc{SamTools_github,
+                title={SAMTools GitHub page},
+                url = {https://github.com/samtools/samtools},}
+            </citation>
+        </citations>
+    </xml>
+    <xml name="version_command">
+        <version_command>samtools --version | head -n 1 | awk '{ print $2 }'</version_command>
+    </xml>
+    <xml name="stdio">
+        <stdio>
+            <exit_code range="1:" level="fatal" description="Error" />
+        </stdio>
+    </xml>
+    <token name="@no-chrom-options@">
+-----
+
+.. class:: warningmark
+
+**No options available? How to re-detect metadata**
+
+If you see a &quot;No options available&quot; within the &quot;**Select references (chromosomes and contigs) you would like to restrict bam to**&quot; drop down, you need to re-detect metadata for the dataset you are trying to process. To do this follow these steps:
+
+1. Click on the **pencil** icon adjacent to the dataset in the history
+2. A new menu will appear in the center pane of the interface
+3. Click **Datatype** tab
+4. Set **New Type** to **BAM**
+5. Click **Save**
+
+The medatada will be re-detected and you will be able to see the list of reference sequences in the &quot;**Select references (chromosomes and contigs) you would like to restrict bam to**&quot; drop-down.
+
+    </token>
+
+</macros>
diff -r cd6eb75c9819 -r cc56fc603e53 samtools_stats.xml
--- a/samtools_stats.xml	Mon Oct 20 14:56:49 2014 -0400
+++ b/samtools_stats.xml	Tue Oct 13 12:56:27 2015 -0400
@@ -1,9 +1,11 @@
-<tool id="samtools_stats" name="Generate statistics" version="1.0.0">
-    <description>for a BAM or SAM file</description>
-    <requirements>
-        <requirement type="package" version="1.1">samtools</requirement>
-    </requirements>
-    <version_command>samtools --version | head -n 1 | awk '{ print $2 }'</version_command>
+<tool id="samtools_stats" name="Stats" version="2.0">
+    <description>generate statistics for BAM dataset</description>
+    <macros>
+    <import>macros.xml</import>
+  </macros>
+    <expand macro="requirements"></expand>
+    <expand macro="stdio"></expand>
+    <expand macro="version_command"></expand>
     <command><![CDATA[
         #if $use_reference.use_ref_selector == "yes":
             #if $use_reference.reference_source.reference_source_selector == "history":
@@ -27,6 +29,14 @@
         #end if
         --GC-depth ${gc_depth}
         --insert-size ${insert_size}
+
+        ## The code below is commented out because using -I/--id options causes the following exception
+        ## Samtools-htslib: init_group_id() header parsing not yet implemented
+
+        ##if str($read_group) != "":
+        ##    -I "${read_group}"
+        ##end if
+
         #if str($read_length) != "0":
             --read-length "${read_length}"
         #end if
@@ -43,60 +53,88 @@
         #if $split_output.split_output_selector == "yes":
             #set outputs_to_split = str($split_output.generate_tables).split(',')
             && mkdir split && echo ${split_output.generate_tables} &&
+
             #if 'sn' in $outputs_to_split:
-                grep -q ^SN  "${output}" ; if [ $? = 0 ] ; then grep ^SN  "${output}" | cut -f 2- > "split/Summary numbers.tab"  ; fi &&
+                echo "# Summary Numbers\n"  > "split/Summary numbers.tab" &&
+                grep -q ^SN  "${output}" ; if [ $? = 0 ] ; then grep ^SN  "${output}" | cut -f 2- >> "split/Summary numbers.tab"  ; fi &&
             #end if
+
             #if 'ffq' in $outputs_to_split:
-                grep -q ^FFQ "${output}" ; if [ $? = 0 ] ; then grep ^FFQ "${output}" | cut -f 2- > "split/First Fragment Qualities.tab" ; fi &&
+                echo "# Columns correspond to qualities and rows to cycles. First column is the cycle number\n" > "split/First Fragment Qualities.tab" &&
+                grep -q ^FFQ "${output}" ; if [ $? = 0 ] ; then grep ^FFQ "${output}" | cut -f 2- >> "split/First Fragment Qualities.tab" ; fi &&
             #end if
+
             #if 'lfq' in $outputs_to_split:
-                grep -q ^LFQ "${output}" ; if [ $? = 0 ] ; then grep ^LFQ "${output}" | cut -f 2- > "split/Last Fragment Qualities.tab" ; fi &&
+                echo "# Columns correspond to qualities and rows to cycles. First column is the cycle number" > "split/Last Fragment Qualities.tab" &&
+                grep -q ^LFQ "${output}" ; if [ $? = 0 ] ; then grep ^LFQ "${output}" | cut -f 2- >> "split/Last Fragment Qualities.tab" ; fi &&
             #end if
+
             #if 'mpc' in $outputs_to_split:
-                grep -q ^MPC "${output}" ; if [ $? = 0 ] ; then grep ^MPC "${output}" | cut -f 2- > "split/Mismatches per cycle.tab" ; fi &&
+                echo "# Columns correspond to qualities, rows to cycles. First column is the cycle number, second is the number of N's and the rest is the number of mismatches" > "split/Mismatches per cycle.tab" &&
+                grep -q ^MPC "${output}" ; if [ $? = 0 ] ; then grep ^MPC "${output}" | cut -f 2- >> "split/Mismatches per cycle.tab" ; fi &&
             #end if
+
             #if 'gcf' in $outputs_to_split:
-                grep -q ^GCF "${output}" ; if [ $? = 0 ] ; then grep ^GCF "${output}" | cut -f 2- > "split/GC Content of first fragments.tab" ; fi &&
+                echo "# GC Content of first fragments" > "split/GC Content of first fragments.tab" &&
+                grep -q ^GCF "${output}" ; if [ $? = 0 ] ; then grep ^GCF "${output}" | cut -f 2- >> "split/GC Content of first fragments.tab" ; fi &&
             #end if
+
             #if 'gcl' in $outputs_to_split:
-                grep -q ^GCL "${output}" ; if [ $? = 0 ] ; then grep ^GCL "${output}" | cut -f 2- > "split/GC Content of last fragments.tab" ; fi &&
+                echo "# GC Content of last fragments" > "split/GC Content of last fragments.tab" &&
+                grep -q ^GCL "${output}" ; if [ $? = 0 ] ; then grep ^GCL "${output}" | cut -f 2- >> "split/GC Content of last fragments.tab" ; fi &&
             #end if
+
             #if 'gcc' in $outputs_to_split:
-                grep -q ^GCC "${output}" ; if [ $? = 0 ] ; then grep ^GCC "${output}" | cut -f 2- > "split/ACGT content per cycle.tab" ; fi &&
+                echo "# ACGT content per cycle. The columns are: cycle, and A,C,G,T counts (percent)" > "split/ACGT content per cycle.tab" &&
+                grep -q ^GCC "${output}" ; if [ $? = 0 ] ; then grep ^GCC "${output}" | cut -f 2- >> "split/ACGT content per cycle.tab" ; fi &&
             #end if
+
             #if 'is' in $outputs_to_split:
-                grep -q ^IS  "${output}" ; if [ $? = 0 ] ; then grep ^IS  "${output}" | cut -f 2- > "split/Insert sizes.tab"  ; fi &&
+                echo "# Insert sizes. The columns are: insert size, pairs total, inward oriented pairs, outward oriented pairs, other pairs" > "split/Insert sizes.tab" &&
+                grep -q ^IS  "${output}" ; if [ $? = 0 ] ; then grep ^IS  "${output}" | cut -f 2- >> "split/Insert sizes.tab"  ; fi &&
             #end if
+
             #if 'rl' in $outputs_to_split:
-                grep -q ^RL  "${output}" ; if [ $? = 0 ] ; then grep ^RL  "${output}" | cut -f 2- > "split/Read lengths.tab"  ; fi &&
+                echo "# Read lengths. The columns are: read length, count" > "split/Read lengths.tab" &&
+                grep -q ^RL  "${output}" ; if [ $? = 0 ] ; then grep ^RL  "${output}" | cut -f 2- >> "split/Read lengths.tab"  ; fi &&
             #end if
+
             #if 'id' in $outputs_to_split:
-                grep -q ^ID  "${output}" ; if [ $? = 0 ] ; then grep ^ID  "${output}" | cut -f 2- > "split/Indel distribution.tab"  ; fi &&
+                echo "# Indel distribution. The columns are: length, number of insertions, number of deletions" > "split/Indel distribution.tab" &&
+                grep -q ^ID  "${output}" ; if [ $? = 0 ] ; then grep ^ID  "${output}" | cut -f 2- >> "split/Indel distribution.tab"  ; fi &&
             #end if
+
             #if 'ic' in $outputs_to_split:
-                grep -q ^IC  "${output}" ; if [ $? = 0 ] ; then grep ^IC  "${output}" | cut -f 2- > "split/Indels per cycle.tab"  ; fi &&
+                echo "# Indels per cycle. The columns are: cycle, number of insertions (fwd), .. (rev) , number of deletions (fwd), .. (rev)" >  "split/Indels per cycle.tab"  &&
+                grep -q ^IC  "${output}" ; if [ $? = 0 ] ; then grep ^IC  "${output}" | cut -f 2- >> "split/Indels per cycle.tab"  ; fi &&
             #end if
+
             #if 'cov' in $outputs_to_split:
-                grep -q ^COV "${output}" ; if [ $? = 0 ] ; then grep ^COV "${output}" | cut -f 2- > "split/Coverage distribution.tab" ; fi &&
+                echo "# Coverage distribution" > "split/Coverage distribution.tab" &&
+                grep -q ^COV "${output}" ; if [ $? = 0 ] ; then grep ^COV "${output}" | cut -f 2- >> "split/Coverage distribution.tab" ; fi &&
             #end if
+
             #if 'gcd' in $outputs_to_split:
-                grep -q ^GCD "${output}" ; if [ $? = 0 ] ; then grep ^GCD "${output}" | cut -f 2- > "split/GC depth.tab" ; fi
+                echo "# GC-depth. The columns are: GC%, unique sequence percentiles, 10th, 25th, 50th, 75th and 90th depth percentile" > "split/GC depth.tab" &&
+                grep -q ^GCD "${output}" ; if [ $? = 0 ] ; then grep ^GCD "${output}" | cut -f 2- >> "split/GC depth.tab" ; fi &&
             #end if
+
+            ## Unix true command below
+
+            true
+
         #end if
         ]]></command>
-    <stdio>
-        <exit_code range="1:" level="fatal" description="Error" />
-    </stdio>
     <inputs>
         <param name="input_file" type="data" format="sam,bam" label="BAM file" />
-        <param name="coverage_min" type="integer" value="1" label="Minimum coverage" />
-        <param name="coverage_max" type="integer" value="1000" label="Maximum coverage" />
-        <param name="coverage_step" type="integer" value="1" label="Coverage step" />
-        <param name="remove_dups" type="boolean" truevalue="--remove-dups" falsevalue="" checked="False" label="Exclude reads marked as duplicates" />
+        <param name="coverage_min" type="integer" value="1" label="Minimum coverage" help="minimum coverage value for --coverage option"/>
+        <param name="coverage_max" type="integer" value="1000" label="Maximum coverage" help="maximum coverage value for --coverage option"/>
+        <param name="coverage_step" type="integer" value="1" label="Coverage step" help="step value for --coverage option"/>
+        <param name="remove_dups" type="boolean" truevalue="--remove-dups" falsevalue="" checked="False" label="Exclude reads marked as duplicates" help="--remove-dups; default = False"/>
         <conditional name="split_output">
-            <param name="split_output_selector" type="select" label="Output">
-                <option value="no" selected="True">Output to a summary file</option>
-                <option value="yes">Extract separate statistics</option>
+            <param name="split_output_selector" type="select" label="Output" help="Select between a single output or separate outputs for each statistics">
+                <option value="no" selected="True">a single summary file</option>
+                <option value="yes">separate datasets for each statistics</option>
             </param>
             <when value="no" />
             <when value="yes">
@@ -118,12 +156,12 @@
             </when>
         </conditional>
         <conditional name="filter_by_flags">
-            <param name="filter_flags" type="select" label="Set filter by flags">
+            <param name="filter_flags" type="select" label="Set filter by flags" help="-f and -F options">
                 <option value="nofilter" selected="True">Do not filter</option>
                 <option value="filter">Filter by flags to exclude or require</option>
             </param>
             <when value="filter">
-                <param name="require_flags" type="select" display="checkboxes" multiple="True" label="Require">
+                <param name="require_flags" type="select" display="checkboxes" multiple="True" label="Require" help="-f">
                     <option value="1">Read is paired</option>
                     <option value="2">Read is mapped in a proper pair</option>
                     <option value="4">The read is unmapped</option>
@@ -136,7 +174,7 @@
                     <option value="512">The read fails platform/vendor quality checks</option>
                     <option value="1024">The read is a PCR or optical duplicate</option>
                 </param>
-                <param name="exclude_flags" type="select" display="checkboxes" multiple="True" label="Exclude">
+                <param name="exclude_flags" type="select" display="checkboxes" multiple="True" label="Exclude" help="-F">
                     <option value="1">Read is paired</option>
                     <option value="2">Read is mapped in a proper pair</option>
                     <option value="4">The read is unmapped</option>
@@ -151,17 +189,36 @@
                 </param>
             </when>
             <when value="nofilter" />
+
         </conditional>
-        <param name="gc_depth" type="float" value="2000" label="GC-depth bin size" />
-        <param name="insert_size" type="integer" value="8000" label="Maximum insert size" />
-        <param name="read_group" type="text" optional="true" label="Limit to a specific read group name" />
-        <param name="read_length" type="integer" value="0" optional="true" label="Minimum read length to generate statistics for" />
-        <param name="most_inserts" type="float" value="0.99" label="Report only the main part of inserts" />
-        <param name="trim_quality" type="integer" value="0" label="BWA trim parameter" />
+        <param name="gc_depth" type="float" value="20000" label="GC-depth bin size" help="--GC-depth; decreasing bin size increases memory requirement; default = 20000.0"/>
+        <param name="insert_size" type="integer" value="8000" label="Maximum insert size" help="--insert-size; default = 8000"/>
+
+        <!--
+            
+            The -I option of samtools stats returns the following message in version 1.2:
+
+            Samtools-htslib: init_group_id() header parsing not yet implemented
+            Abort trap: 6
+    
+            Because of this the section below is commented out until this stats bug is fixed
+
+            <param name="read_group" type="select" optional="true" label="Limit to a specific read group name" > 
+                <options>
+                    <filter type="data_meta" ref="input_file" key="read_groups" />
+                </options>
+            </param>
+
+        -->
+
+        <param name="read_length" type="integer" value="0" label="Minimum read length to generate statistics for" help="--read-length; default = no cutoff"/>
+        <param name="most_inserts" type="float" value="0.99" label="Report only the main part of inserts" help="--most-inserts; default = 0.99"/>
+        <param name="trim_quality" type="integer" value="0" label="BWA trim parameter" help="--trim-quality; default = 0"/>
+        
         <conditional name="use_reference">
-            <param name="use_ref_selector" type="select" label="Use reference sequence">
+            <param name="use_ref_selector" type="select" label="Use reference sequence" help="--ref-seq; required for GC-depth and mismatches-per-cycle calculation">
                 <option value="yes">Use reference</option>
-                <option value="no">Do not use reference</option>
+                <option selected="True" value="no">Do not use reference</option>
             </param>
             <when value="yes">
                 <conditional name="reference_source">
@@ -182,7 +239,9 @@
             </when>
             <when value="no" />
         </conditional>
+
     </inputs>
+
     <outputs>
         <data format="tabular" name="output" label="${tool.name} on ${on_string}">
             <discover_datasets pattern="(?P&lt;designation&gt;.+)\.tab" ext="tabular" visible="true" directory="split" />
@@ -190,38 +249,48 @@
     </outputs>
     <tests>
         <test>
-            <param name="input_file" value="phiX.bam" ftype="bam" />
-            <param name="use_ref_selector" value="no" />
-            <output name="output" file="samtools_stats_out1.tab" ftype="tabular" lines_diff="2" />
+            <param name="input_file" value="samtools_stats_input.bam" ftype="bam" />
+            <param name="use_ref_selector" value="yes" />
+            <param name="reference_source_selector" value="history" />
+            <param name="ref_file" value="samtools_stats_ref.fa" ftype="fasta" />
+            <output name="output" file="samtools_stats_out1.tab" ftype="tabular" lines_diff="4" />
         </test>
         <test>
-            <param name="input_file" value="phiX.bam" ftype="bam" />
-            <param name="use_ref_selector" value="no" />
+            <param name="input_file" value="samtools_stats_input.bam" ftype="bam" />
+            <param name="use_ref_selector" value="yes" />
+            <param name="reference_source_selector" value="history" />
+            <param name="ref_file" value="samtools_stats_ref.fa" ftype="fasta" />
             <param name="split_output_selector" value="yes" />
-            <param name="generate_tables" value="sn,gcf,gcl,gcc,cov,gcd" />
-            <output name="output" file="samtools_stats_out2.tab" lines_diff="2">
+            <param name="generate_tables" value="sn,mpc,gcc" />
+            <output name="output" file="samtools_stats_out2.tab" lines_diff="4">
                 <discovered_dataset designation="Summary numbers" ftype="tabular" file="samtools_stats_out2/sn.tab" />
-                <discovered_dataset designation="GC Content of first fragments" ftype="tabular" file="samtools_stats_out2/gcf.tab" />
-                <discovered_dataset designation="GC Content of last fragments" ftype="tabular" file="samtools_stats_out2/gcl.tab" />
                 <discovered_dataset designation="ACGT content per cycle" ftype="tabular" file="samtools_stats_out2/gcc.tab" />
-                <discovered_dataset designation="Coverage distribution" ftype="tabular" file="samtools_stats_out2/cov.tab" />
-                <discovered_dataset designation="GC depth" ftype="tabular" file="samtools_stats_out2/gcd.tab" />
+                <discovered_dataset designation="Mismatches per cycle" ftype="tabular" file="samtools_stats_out2/mpc.tab" />
             </output>
         </test>
     </tests>
-    <help>
+    <help><![CDATA[
 **What it does**
 
-This tool runs the ``samtools stats`` command in the SAMtools toolkit.
-
-Collects statistics from BAM files. The output can be visualized using plot-bamstats.
-
-**Citation**
+This tool runs the ``samtools stats`` command. It has the following options::
 
-For the underlying tool, please cite `Li H, Handsaker B, Wysoker A, Fennell T, Ruan J, Homer N, Marth G, Abecasis G, Durbin R; 1000 Genome Project Data Processing Subgroup. The Sequence Alignment/Map format and SAMtools. Bioinformatics. 2009 Aug 15;25(16):2078-9. &lt;http://www.ncbi.nlm.nih.gov/pubmed/19505943&gt;`_
-
+    -c, --coverage <int>,<int>,<int>    Coverage distribution min,max,step [1,1000,1]
+    -d, --remove-dups                   Exclude from statistics reads marked as duplicates
+    -f, --required-flag  <str|int>      Required flag, 0 for unset. See also `samtools flags` [0]
+    -F, --filtering-flag <str|int>      Filtering flag, 0 for unset. See also `samtools flags` [0]
+        --GC-depth <float>              the size of GC-depth bins (decreasing bin size increases memory requirement) [2e4]
+    -h, --help                          This help message
+    -i, --insert-size <int>             Maximum insert size [8000]
+    -I, --id <string>                   Include only listed read group or sample name
+    -l, --read-length <int>             Include in the statistics only reads with the given read length []
+    -m, --most-inserts <float>          Report only the main part of inserts [0.99]
+    -q, --trim-quality <int>            The BWA trimming parameter [0]
+    -r, --ref-seq <file>                Reference sequence (required for GC-depth and mismatches-per-cycle calculation). Galaxy
+                                        will provide options for selecting a reference cached as this Galaxy instance or choosing
+                                        one from history.
+   
 
-If you use this tool in Galaxy, please cite Blankenberg D, et al. *In preparation.*
-    </help>
+    ]]></help>
+    <expand macro="citations"></expand>
 </tool>
 
diff -r cd6eb75c9819 -r cc56fc603e53 test-data/samtools_stats_input.bam
Binary file test-data/samtools_stats_input.bam has changed
diff -r cd6eb75c9819 -r cc56fc603e53 test-data/samtools_stats_out1.tab
--- a/test-data/samtools_stats_out1.tab	Mon Oct 20 14:56:49 2014 -0400
+++ b/test-data/samtools_stats_out1.tab	Tue Oct 13 12:56:27 2015 -0400
@@ -1,951 +1,1137 @@
-# This file was produced by samtools stats (1.1+htslib-1.1) and can be plotted using plot-bamstats
-# The command line was:  stats --coverage 1,1000,1 --GC-depth 2000.0 --insert-size 8000 --most-inserts 0.99 --trim-quality 0 /tmp/tmptYfjRJ/tmpl0qHNN/database/files/000/dataset_929.dat
+# This file was produced by samtools stats (1.2+htslib-1.2.1) and can be plotted using plot-bamstats
+# The command line was:  stats --coverage 1,1000,1 --GC-depth 20000.0 --insert-size 8000 --most-inserts 0.99 --trim-quality 0 --ref-seq /Users/anton/galaxy-git/database/files/000/dataset_9.dat /Users/anton/galaxy-git/database/files/000/dataset_10.dat
 # CHK, Checksum	[2]Read Names	[3]Sequences	[4]Qualities
 # CHK, CRC32 of reads which passed filtering followed by addition (32bit overflow)
-CHK	76594422	342222f2	06e86208
+CHK	1bd20fd8	58ad2167	29883386
 # Summary Numbers. Use `grep ^SN | cut -f 2-` to extract this part.
-SN	raw total sequences:	1000
+SN	raw total sequences:	200
 SN	filtered sequences:	0
-SN	sequences:	1000
+SN	sequences:	200
 SN	is sorted:	1
-SN	1st fragments:	500
-SN	last fragments:	500
-SN	reads mapped:	972
-SN	reads mapped and paired:	954	# paired-end technology bit set + both mates mapped
-SN	reads unmapped:	28
+SN	1st fragments:	100
+SN	last fragments:	100
+SN	reads mapped:	25
+SN	reads mapped and paired:	0	# paired-end technology bit set + both mates mapped
+SN	reads unmapped:	175
 SN	reads properly paired:	0	# proper-pair bit set
-SN	reads paired:	1000	# paired-end technology bit set
+SN	reads paired:	200	# paired-end technology bit set
 SN	reads duplicated:	0	# PCR or optical duplicate bit set
-SN	reads MQ0:	0	# mapped and MQ=0
+SN	reads MQ0:	6	# mapped and MQ=0
 SN	reads QC failed:	0
 SN	non-primary alignments:	0
-SN	total length:	70000	# ignores clipping
-SN	bases mapped:	68040	# ignores clipping
-SN	bases mapped (cigar):	68040	# more accurate
+SN	total length:	50200	# ignores clipping
+SN	bases mapped:	6275	# ignores clipping
+SN	bases mapped (cigar):	6275	# more accurate
 SN	bases trimmed:	0
 SN	bases duplicated:	0
-SN	mismatches:	1237	# from NM fields
-SN	error rate:	1.818048e-02	# mismatches / bases mapped (cigar)
-SN	average length:	70
-SN	maximum length:	70
-SN	average quality:	17.0
-SN	insert size average:	495.1
-SN	insert size standard deviation:	48.9
-SN	inward oriented pairs:	477
+SN	mismatches:	591	# from NM fields
+SN	error rate:	9.418327e-02	# mismatches / bases mapped (cigar)
+SN	average length:	251
+SN	maximum length:	251
+SN	average quality:	34.7
+SN	insert size average:	0.0
+SN	insert size standard deviation:	0.0
+SN	inward oriented pairs:	0
 SN	outward oriented pairs:	0
 SN	pairs with other orientation:	0
 SN	pairs on different chromosomes:	0
 # First Fragment Qualitites. Use `grep ^FFQ | cut -f 2-` to extract this part.
 # Columns correspond to qualities and rows to cycles. First column is the cycle number.
-FFQ	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	500	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
-FFQ	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	500	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
-FFQ	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	500	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
-FFQ	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	500	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
-FFQ	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	500	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
-FFQ	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	500	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
-FFQ	7	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	500	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
-FFQ	8	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	500	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
-FFQ	9	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	500	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
-FFQ	10	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	500	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
-FFQ	11	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	500	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
-FFQ	12	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	500	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
-FFQ	13	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	500	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
-FFQ	14	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	500	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
-FFQ	15	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	500	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
-FFQ	16	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	500	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
-FFQ	17	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	500	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
-FFQ	18	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	500	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
-FFQ	19	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	500	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
-FFQ	20	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	500	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
-FFQ	21	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	500	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
-FFQ	22	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	500	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
-FFQ	23	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	500	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
-FFQ	24	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	500	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
-FFQ	25	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	500	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
-FFQ	26	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	500	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
-FFQ	27	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	500	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
-FFQ	28	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	500	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
-FFQ	29	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	500	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
-FFQ	30	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	500	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
-FFQ	31	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	500	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
-FFQ	32	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	500	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
-FFQ	33	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	500	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
-FFQ	34	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	500	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
-FFQ	35	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	500	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
-FFQ	36	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	500	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
-FFQ	37	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	500	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
-FFQ	38	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	500	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
-FFQ	39	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	500	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
-FFQ	40	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	500	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
-FFQ	41	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	500	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
-FFQ	42	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	500	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
-FFQ	43	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	500	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
-FFQ	44	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	500	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
-FFQ	45	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	500	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
-FFQ	46	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	500	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
-FFQ	47	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	500	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
-FFQ	48	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	500	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
-FFQ	49	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	500	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
-FFQ	50	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	500	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
-FFQ	51	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	500	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
-FFQ	52	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	500	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
-FFQ	53	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	500	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
-FFQ	54	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	500	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
-FFQ	55	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	500	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
-FFQ	56	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	500	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
-FFQ	57	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	500	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
-FFQ	58	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	500	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
-FFQ	59	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	500	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
-FFQ	60	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	500	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
-FFQ	61	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	500	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
-FFQ	62	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	500	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
-FFQ	63	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	500	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
-FFQ	64	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	500	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
-FFQ	65	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	500	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
-FFQ	66	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	500	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
-FFQ	67	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	500	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
-FFQ	68	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	500	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
-FFQ	69	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	500	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
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-FFQ	71	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
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+FFQ	12	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	2	8	2	0	86	0	0	0	0
+FFQ	13	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	3	92	0	0	0
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+FFQ	192	0	0	0	0	0	0	0	0	0	0	0	0	3	3	2	6	0	0	0	0	0	0	0	0	3	3	6	0	1	0	0	1	5	9	4	4	5	38	7	0	0	0
+FFQ	193	0	0	0	0	0	0	0	0	0	0	0	0	1	1	2	7	0	0	0	0	0	0	0	0	4	3	3	0	0	0	0	0	5	10	4	2	11	43	4	0	0	0
+FFQ	194	0	0	0	0	0	0	0	0	0	0	0	0	1	1	1	6	0	0	0	0	0	0	0	0	5	1	8	0	1	0	1	0	4	8	2	7	3	43	8	0	0	0
+FFQ	195	0	0	0	0	0	0	0	0	0	0	0	0	4	1	2	8	0	0	0	0	0	0	0	0	0	0	4	0	1	0	3	0	2	13	1	4	8	39	10	0	0	0
+FFQ	196	0	0	0	0	0	0	0	0	0	0	0	0	1	6	1	3	0	0	0	0	0	0	0	0	1	1	3	0	2	0	1	1	4	11	2	1	9	43	10	0	0	0
+FFQ	197	0	0	0	0	0	0	0	0	0	0	0	0	2	0	2	10	0	0	0	0	0	0	0	0	3	0	1	0	0	0	2	1	6	10	2	0	4	47	10	0	0	0
+FFQ	198	0	0	0	0	0	0	0	0	0	0	0	0	2	4	4	7	0	0	0	0	0	0	0	0	1	0	5	1	2	1	0	0	1	7	4	2	4	47	8	0	0	0
+FFQ	199	0	0	0	0	0	0	0	0	0	0	0	0	1	4	5	6	0	0	0	0	0	0	0	0	3	2	7	0	0	0	1	0	3	7	3	3	7	39	9	0	0	0
+FFQ	200	0	0	0	0	0	0	0	0	0	0	0	0	0	5	2	8	0	0	0	0	0	0	0	0	5	1	1	0	1	0	2	0	5	12	5	5	3	40	5	0	0	0
+FFQ	201	0	0	0	0	0	0	0	0	0	0	0	0	2	1	6	7	0	0	0	0	0	0	0	0	5	0	4	0	0	0	1	1	7	8	1	0	4	47	6	0	0	0
+FFQ	202	0	0	0	0	0	0	0	0	0	0	0	0	6	7	3	8	0	0	0	0	0	0	0	0	3	3	1	0	0	0	1	0	4	12	2	3	2	34	11	0	0	0
+FFQ	203	0	0	0	0	0	0	0	0	0	0	0	0	8	5	2	5	0	0	0	0	0	0	0	0	2	0	4	0	1	0	1	1	4	9	7	2	2	37	10	0	0	0
+FFQ	204	0	0	0	0	0	0	0	0	0	0	0	0	2	5	1	6	0	0	0	0	0	0	0	0	4	3	5	0	0	0	0	0	5	11	3	3	5	41	6	0	0	0
+FFQ	205	0	0	0	0	0	0	0	0	0	0	0	0	5	11	1	5	0	0	0	0	0	0	0	0	3	0	3	0	0	0	2	0	4	18	2	4	4	33	5	0	0	0
+FFQ	206	0	0	0	0	0	0	0	0	0	0	0	0	3	7	2	5	0	0	0	0	0	0	0	0	4	5	7	0	0	0	0	0	2	13	0	3	4	37	8	0	0	0
+FFQ	207	0	0	0	0	0	0	0	0	0	0	0	0	1	6	5	6	0	0	0	0	0	0	0	0	4	2	4	0	2	0	4	1	3	10	4	2	3	36	7	0	0	0
+FFQ	208	0	0	0	0	0	0	0	0	0	0	0	0	1	4	3	4	0	0	0	0	0	0	0	0	6	4	4	0	0	0	1	0	9	11	2	5	3	36	7	0	0	0
+FFQ	209	0	0	0	0	0	0	0	0	0	0	0	0	2	7	4	8	0	0	0	0	0	0	0	0	3	2	4	0	0	0	3	0	8	14	2	1	2	33	7	0	0	0
+FFQ	210	0	0	0	0	0	0	0	0	0	0	0	0	1	5	6	7	0	0	0	0	0	0	0	0	4	3	3	0	0	0	3	0	6	6	0	3	5	43	5	0	0	0
+FFQ	211	0	0	0	0	0	0	0	0	0	0	0	0	2	5	6	4	0	0	0	0	0	0	0	0	6	3	5	0	0	0	0	2	5	11	4	3	3	35	6	0	0	0
+FFQ	212	0	0	0	0	0	0	0	0	0	0	0	0	0	3	6	7	0	0	0	0	0	0	0	0	3	4	8	0	0	0	0	0	5	17	1	1	4	35	6	0	0	0
+FFQ	213	0	0	0	0	0	0	0	0	0	0	0	0	6	6	10	5	0	0	0	0	0	0	0	0	5	3	1	0	0	0	0	1	4	7	1	5	2	43	1	0	0	0
+FFQ	214	0	0	0	0	0	0	0	0	0	0	0	0	4	9	4	10	0	0	0	0	0	0	0	0	4	1	6	0	2	0	1	1	3	9	0	2	3	39	2	0	0	0
+FFQ	215	0	0	0	0	0	0	0	0	0	0	0	0	5	6	5	6	0	0	0	0	0	0	0	0	5	5	8	0	0	0	1	2	5	12	0	0	4	34	2	0	0	0
+FFQ	216	0	0	0	0	0	0	0	0	0	0	0	0	3	3	6	5	0	0	0	0	0	0	0	0	3	6	5	1	3	0	1	0	5	15	1	3	2	37	1	0	0	0
+FFQ	217	0	0	0	0	0	0	0	0	0	0	0	0	3	7	6	4	0	0	0	0	0	0	0	0	4	1	2	0	0	1	1	0	10	15	1	3	2	39	1	0	0	0
+FFQ	218	0	0	0	0	0	0	0	0	0	0	0	0	2	4	7	2	0	0	0	0	0	0	0	0	6	4	10	0	0	0	1	0	3	13	1	5	3	35	4	0	0	0
+FFQ	219	0	0	0	0	0	0	0	0	0	0	0	0	2	5	4	4	0	0	0	0	0	0	0	0	5	1	5	0	0	1	0	0	4	13	1	6	3	45	1	0	0	0
+FFQ	220	0	0	0	0	0	0	0	0	0	0	0	0	2	4	9	4	0	0	0	0	0	0	0	0	4	2	2	0	0	0	0	2	5	14	1	1	2	47	1	0	0	0
+FFQ	221	0	0	0	0	0	0	0	0	0	0	0	0	3	4	6	4	0	0	0	0	0	0	0	0	1	4	6	0	0	0	0	0	2	10	1	3	3	53	0	0	0	0
+FFQ	222	0	0	0	0	0	0	0	0	0	0	0	0	3	5	8	6	0	0	0	0	0	0	0	0	5	2	6	0	0	0	0	0	2	6	1	3	4	49	0	0	0	0
+FFQ	223	0	0	0	0	0	0	0	0	0	0	0	0	5	8	6	8	0	0	0	0	0	0	0	0	3	3	5	1	1	0	1	0	0	13	1	0	2	43	0	0	0	0
+FFQ	224	0	0	0	0	0	0	0	0	0	0	0	0	2	9	11	6	0	0	0	0	0	0	0	0	4	3	3	0	0	0	0	1	2	15	1	0	1	42	0	0	0	0
+FFQ	225	0	0	0	0	0	0	0	0	0	0	0	0	4	8	2	4	0	0	0	0	0	0	0	0	7	3	10	0	2	0	0	0	3	10	1	2	5	39	0	0	0	0
+FFQ	226	0	0	0	0	0	0	0	0	0	0	0	0	5	9	3	7	0	0	0	0	0	0	0	0	8	5	5	0	1	0	2	1	3	13	0	2	3	33	0	0	0	0
+FFQ	227	0	0	0	0	0	0	0	0	0	0	0	0	10	8	4	5	0	0	0	0	0	0	0	0	3	2	3	0	0	0	2	3	5	17	0	3	2	33	0	0	0	0
+FFQ	228	0	0	0	0	0	0	0	0	0	0	0	0	10	8	6	2	0	0	0	0	0	0	0	0	6	1	6	0	1	2	1	1	4	13	1	2	1	35	0	0	0	0
+FFQ	229	0	0	0	0	0	0	0	0	0	0	0	0	4	11	6	6	0	0	0	0	0	0	0	0	1	3	5	0	0	0	0	2	6	13	0	3	5	35	0	0	0	0
+FFQ	230	0	0	0	0	0	0	0	0	0	0	0	0	4	11	10	7	0	0	0	0	0	0	0	0	2	3	4	0	0	0	1	2	9	10	0	1	1	35	0	0	0	0
+FFQ	231	0	0	0	0	0	0	0	0	0	0	0	0	6	7	6	6	0	0	0	0	0	0	0	0	4	5	4	0	1	0	1	0	4	13	1	5	5	32	0	0	0	0
+FFQ	232	0	0	0	0	0	0	0	0	0	0	0	0	3	7	10	4	0	0	0	0	0	0	0	0	6	4	7	0	0	0	0	0	3	12	0	1	3	40	0	0	0	0
+FFQ	233	0	0	0	0	0	0	0	0	0	0	0	0	7	7	9	8	0	0	0	0	0	0	0	0	5	5	3	1	1	0	0	0	6	10	1	1	4	32	0	0	0	0
+FFQ	234	0	0	0	0	0	0	0	0	0	0	0	0	9	6	10	5	0	0	0	0	0	0	0	0	5	5	3	1	0	0	0	1	5	11	0	1	4	34	0	0	0	0
+FFQ	235	0	0	0	0	0	0	0	0	0	0	0	0	4	10	13	7	0	0	0	0	0	0	0	0	5	1	4	0	0	0	2	1	5	7	0	0	4	37	0	0	0	0
+FFQ	236	0	0	0	0	0	0	0	0	0	0	0	0	7	8	15	6	0	0	0	0	0	0	0	0	7	3	5	1	0	0	0	1	6	8	0	1	1	31	0	0	0	0
+FFQ	237	0	0	0	0	0	0	0	0	0	0	0	0	2	9	13	6	0	0	0	0	0	0	0	0	6	4	7	1	0	0	0	1	3	12	0	1	1	34	0	0	0	0
+FFQ	238	0	0	0	0	0	0	0	0	0	0	0	0	2	10	16	6	0	0	0	0	0	0	0	0	9	2	3	0	0	0	0	0	5	9	0	2	3	33	0	0	0	0
+FFQ	239	0	0	0	0	0	0	0	0	0	0	0	0	4	5	17	9	0	0	0	0	0	0	0	0	7	3	1	0	0	0	1	1	2	15	0	1	3	31	0	0	0	0
+FFQ	240	0	0	0	0	0	0	0	0	0	0	0	0	0	10	19	6	0	0	0	0	0	0	0	0	6	4	4	0	0	1	3	0	2	13	0	1	1	30	0	0	0	0
+FFQ	241	0	0	0	0	0	0	0	0	0	0	0	0	1	4	23	9	0	0	0	0	0	0	0	0	7	5	8	1	0	0	2	1	1	8	0	1	3	26	0	0	0	0
+FFQ	242	0	0	0	0	0	0	0	0	0	0	0	0	3	10	19	10	0	0	0	0	0	0	0	0	2	5	4	1	0	0	0	1	2	10	0	0	2	31	0	0	0	0
+FFQ	243	0	0	0	0	0	0	0	0	0	0	0	0	2	2	17	14	0	0	0	0	0	0	0	0	6	5	5	0	0	0	0	0	6	13	0	2	3	25	0	0	0	0
+FFQ	244	0	0	0	0	0	0	0	0	0	0	0	0	1	3	18	11	0	0	0	0	0	0	0	0	6	5	5	1	0	0	1	0	2	12	0	5	1	29	0	0	0	0
+FFQ	245	0	0	0	0	0	0	0	0	0	0	0	0	1	8	14	11	0	0	0	0	0	0	0	0	8	5	3	1	0	0	1	0	1	15	1	1	3	27	0	0	0	0
+FFQ	246	0	0	0	0	0	0	0	0	0	0	0	0	4	6	15	12	0	0	0	0	0	0	0	0	5	2	8	1	0	1	1	0	1	13	0	2	1	28	0	0	0	0
+FFQ	247	0	0	0	0	0	0	0	0	0	0	0	0	8	3	16	14	0	0	0	0	0	0	0	0	10	4	6	0	0	0	0	0	2	15	1	2	2	17	0	0	0	0
+FFQ	248	0	0	0	0	0	0	0	0	0	0	0	0	5	6	21	8	0	0	0	0	0	0	0	0	7	8	6	2	0	0	0	1	1	14	0	2	2	17	0	0	0	0
+FFQ	249	0	0	0	0	0	0	0	0	0	0	0	0	5	6	20	8	0	0	0	0	0	0	0	0	5	7	10	0	1	0	0	0	1	15	0	2	0	20	0	0	0	0
+FFQ	250	0	0	0	0	0	0	0	0	0	0	0	0	2	10	15	10	0	0	0	0	0	0	0	0	9	5	8	1	0	0	0	2	6	10	0	0	2	20	0	0	0	0
+FFQ	251	0	0	0	0	0	0	0	0	0	0	0	0	7	20	21	17	0	0	0	0	0	0	0	0	7	7	6	0	0	0	0	1	2	4	0	0	0	8	0	0	0	0
+FFQ	252	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
 # Last Fragment Qualitites. Use `grep ^LFQ | cut -f 2-` to extract this part.
 # Columns correspond to qualities and rows to cycles. First column is the cycle number.
-LFQ	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	500	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
-LFQ	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	500	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
-LFQ	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	500	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
-LFQ	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	500	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
-LFQ	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	500	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
-LFQ	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	500	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
-LFQ	7	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	500	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
-LFQ	8	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	500	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
-LFQ	9	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	500	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
-LFQ	10	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	500	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
-LFQ	11	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	500	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
-LFQ	12	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	500	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
-LFQ	13	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	500	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
-LFQ	14	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	500	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
-LFQ	15	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	500	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
-LFQ	16	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	500	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
-LFQ	17	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	500	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
-LFQ	18	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	500	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
-LFQ	19	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	500	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
-LFQ	20	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	500	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
-LFQ	21	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	500	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
-LFQ	22	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	500	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
-LFQ	23	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	500	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
-LFQ	24	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	500	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
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+LFQ	220	0	0	0	0	0	0	0	0	0	0	0	0	2	4	9	4	0	0	0	0	0	0	0	0	4	2	2	0	0	0	0	2	5	14	1	1	2	47	1	0	0	0
+LFQ	221	0	0	0	0	0	0	0	0	0	0	0	0	3	4	6	4	0	0	0	0	0	0	0	0	1	4	6	0	0	0	0	0	2	10	1	3	3	53	0	0	0	0
+LFQ	222	0	0	0	0	0	0	0	0	0	0	0	0	3	5	8	6	0	0	0	0	0	0	0	0	5	2	6	0	0	0	0	0	2	6	1	3	4	49	0	0	0	0
+LFQ	223	0	0	0	0	0	0	0	0	0	0	0	0	5	8	6	8	0	0	0	0	0	0	0	0	3	3	5	1	1	0	1	0	0	13	1	0	2	43	0	0	0	0
+LFQ	224	0	0	0	0	0	0	0	0	0	0	0	0	2	9	11	6	0	0	0	0	0	0	0	0	4	3	3	0	0	0	0	1	2	15	1	0	1	42	0	0	0	0
+LFQ	225	0	0	0	0	0	0	0	0	0	0	0	0	4	8	2	4	0	0	0	0	0	0	0	0	7	3	10	0	2	0	0	0	3	10	1	2	5	39	0	0	0	0
+LFQ	226	0	0	0	0	0	0	0	0	0	0	0	0	5	9	3	7	0	0	0	0	0	0	0	0	8	5	5	0	1	0	2	1	3	13	0	2	3	33	0	0	0	0
+LFQ	227	0	0	0	0	0	0	0	0	0	0	0	0	10	8	4	5	0	0	0	0	0	0	0	0	3	2	3	0	0	0	2	3	5	17	0	3	2	33	0	0	0	0
+LFQ	228	0	0	0	0	0	0	0	0	0	0	0	0	10	8	6	2	0	0	0	0	0	0	0	0	6	1	6	0	1	2	1	1	4	13	1	2	1	35	0	0	0	0
+LFQ	229	0	0	0	0	0	0	0	0	0	0	0	0	4	11	6	6	0	0	0	0	0	0	0	0	1	3	5	0	0	0	0	2	6	13	0	3	5	35	0	0	0	0
+LFQ	230	0	0	0	0	0	0	0	0	0	0	0	0	4	11	10	7	0	0	0	0	0	0	0	0	2	3	4	0	0	0	1	2	9	10	0	1	1	35	0	0	0	0
+LFQ	231	0	0	0	0	0	0	0	0	0	0	0	0	6	7	6	6	0	0	0	0	0	0	0	0	4	5	4	0	1	0	1	0	4	13	1	5	5	32	0	0	0	0
+LFQ	232	0	0	0	0	0	0	0	0	0	0	0	0	3	7	10	4	0	0	0	0	0	0	0	0	6	4	7	0	0	0	0	0	3	12	0	1	3	40	0	0	0	0
+LFQ	233	0	0	0	0	0	0	0	0	0	0	0	0	7	7	9	8	0	0	0	0	0	0	0	0	5	5	3	1	1	0	0	0	6	10	1	1	4	32	0	0	0	0
+LFQ	234	0	0	0	0	0	0	0	0	0	0	0	0	9	6	10	5	0	0	0	0	0	0	0	0	5	5	3	1	0	0	0	1	5	11	0	1	4	34	0	0	0	0
+LFQ	235	0	0	0	0	0	0	0	0	0	0	0	0	4	10	13	7	0	0	0	0	0	0	0	0	5	1	4	0	0	0	2	1	5	7	0	0	4	37	0	0	0	0
+LFQ	236	0	0	0	0	0	0	0	0	0	0	0	0	7	8	15	6	0	0	0	0	0	0	0	0	7	3	5	1	0	0	0	1	6	8	0	1	1	31	0	0	0	0
+LFQ	237	0	0	0	0	0	0	0	0	0	0	0	0	2	9	13	6	0	0	0	0	0	0	0	0	6	4	7	1	0	0	0	1	3	12	0	1	1	34	0	0	0	0
+LFQ	238	0	0	0	0	0	0	0	0	0	0	0	0	2	10	16	6	0	0	0	0	0	0	0	0	9	2	3	0	0	0	0	0	5	9	0	2	3	33	0	0	0	0
+LFQ	239	0	0	0	0	0	0	0	0	0	0	0	0	4	5	17	9	0	0	0	0	0	0	0	0	7	3	1	0	0	0	1	1	2	15	0	1	3	31	0	0	0	0
+LFQ	240	0	0	0	0	0	0	0	0	0	0	0	0	0	10	19	6	0	0	0	0	0	0	0	0	6	4	4	0	0	1	3	0	2	13	0	1	1	30	0	0	0	0
+LFQ	241	0	0	0	0	0	0	0	0	0	0	0	0	1	4	23	9	0	0	0	0	0	0	0	0	7	5	8	1	0	0	2	1	1	8	0	1	3	26	0	0	0	0
+LFQ	242	0	0	0	0	0	0	0	0	0	0	0	0	3	10	19	10	0	0	0	0	0	0	0	0	2	5	4	1	0	0	0	1	2	10	0	0	2	31	0	0	0	0
+LFQ	243	0	0	0	0	0	0	0	0	0	0	0	0	2	2	17	14	0	0	0	0	0	0	0	0	6	5	5	0	0	0	0	0	6	13	0	2	3	25	0	0	0	0
+LFQ	244	0	0	0	0	0	0	0	0	0	0	0	0	1	3	18	11	0	0	0	0	0	0	0	0	6	5	5	1	0	0	1	0	2	12	0	5	1	29	0	0	0	0
+LFQ	245	0	0	0	0	0	0	0	0	0	0	0	0	1	8	14	11	0	0	0	0	0	0	0	0	8	5	3	1	0	0	1	0	1	15	1	1	3	27	0	0	0	0
+LFQ	246	0	0	0	0	0	0	0	0	0	0	0	0	4	6	15	12	0	0	0	0	0	0	0	0	5	2	8	1	0	1	1	0	1	13	0	2	1	28	0	0	0	0
+LFQ	247	0	0	0	0	0	0	0	0	0	0	0	0	8	3	16	14	0	0	0	0	0	0	0	0	10	4	6	0	0	0	0	0	2	15	1	2	2	17	0	0	0	0
+LFQ	248	0	0	0	0	0	0	0	0	0	0	0	0	5	6	21	8	0	0	0	0	0	0	0	0	7	8	6	2	0	0	0	1	1	14	0	2	2	17	0	0	0	0
+LFQ	249	0	0	0	0	0	0	0	0	0	0	0	0	5	6	20	8	0	0	0	0	0	0	0	0	5	7	10	0	1	0	0	0	1	15	0	2	0	20	0	0	0	0
+LFQ	250	0	0	0	0	0	0	0	0	0	0	0	0	2	10	15	10	0	0	0	0	0	0	0	0	9	5	8	1	0	0	0	2	6	10	0	0	2	20	0	0	0	0
+LFQ	251	0	0	0	0	0	0	0	0	0	0	0	0	7	20	21	17	0	0	0	0	0	0	0	0	7	7	6	0	0	0	0	1	2	4	0	0	0	8	0	0	0	0
+LFQ	252	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
+# Mismatches per cycle and quality. Use `grep ^MPC | cut -f 2-` to extract this part.
+# Columns correspond to qualities, rows to cycles. First column is the cycle number, second
+# is the number of N's and the rest is the number of mismatches
+MPC	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	2	0	0	0	0	0	0
+MPC	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	1	0	0	0	0	0	0
+MPC	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	2	0	0	0	0	0	0
+MPC	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	2	0	0	0	0	0	0
+MPC	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
+MPC	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
+MPC	7	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
+MPC	8	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
+MPC	9	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
+MPC	10	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
+MPC	11	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
+MPC	12	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
+MPC	13	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
+MPC	14	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
+MPC	15	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
+MPC	16	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
+MPC	17	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
+MPC	18	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
+MPC	19	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
+MPC	20	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
+MPC	21	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
+MPC	22	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
+MPC	23	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
+MPC	24	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
+MPC	25	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
+MPC	26	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
+MPC	27	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
+MPC	28	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
+MPC	29	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
+MPC	30	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
+MPC	31	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
+MPC	32	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
+MPC	33	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
+MPC	34	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
+MPC	35	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
+MPC	36	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
+MPC	37	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
+MPC	38	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
+MPC	39	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
+MPC	40	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
+MPC	41	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
+MPC	42	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
+MPC	43	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
+MPC	44	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
+MPC	45	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
+MPC	46	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
+MPC	47	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
+MPC	48	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
+MPC	49	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
+MPC	50	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
+MPC	51	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
+MPC	52	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
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+MPC	230	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
+MPC	231	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
+MPC	232	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0
+MPC	233	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0
+MPC	234	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0
+MPC	235	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
+MPC	236	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0
+MPC	237	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0
+MPC	238	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
+MPC	239	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0
+MPC	240	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0
+MPC	241	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
+MPC	242	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0
+MPC	243	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
+MPC	244	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
+MPC	245	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
+MPC	246	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0
+MPC	247	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	0	0	0
+MPC	248	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	3	2	0	0	0	0	0	0	0	0	2	1	0	0	0	0	0	0	0	2	0	0	0	3	0	0	0
+MPC	249	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	1	1	0	0	0	0	0	0	0	0	2	0	5	0	0	0	0	0	0	2	0	0	0	0	0	0	0
+MPC	250	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	2	2	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	1	2	0	0	0	2	0	0	0
+MPC	251	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	2	2	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	2	0	0	0	0	3	0	0	0
+MPC	252	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
 # GC Content of first fragments. Use `grep ^GCF | cut -f 2-` to extract this part.
-GCF	14.82	0
-GCF	31.16	2
-GCF	33.42	6
-GCF	34.92	4
-GCF	36.18	6
-GCF	37.44	12
-GCF	38.94	28
-GCF	40.45	34
-GCF	41.96	37
-GCF	43.47	46
-GCF	44.72	55
-GCF	45.98	57
-GCF	47.49	68
-GCF	48.99	60
-GCF	50.50	27
-GCF	52.01	18
-GCF	53.52	15
-GCF	54.77	9
-GCF	56.03	4
-GCF	57.54	3
-GCF	59.05	2
-GCF	60.55	4
-GCF	62.06	0
-GCF	63.32	1
+GCF	21.86	0
+GCF	44.22	2
+GCF	44.97	8
+GCF	45.48	4
+GCF	45.98	3
+GCF	46.48	5
+GCF	46.98	2
+GCF	47.49	3
+GCF	47.99	12
+GCF	48.49	13
+GCF	48.99	9
+GCF	49.50	2
+GCF	50.25	3
+GCF	51.01	6
+GCF	51.51	4
+GCF	52.01	1
+GCF	52.51	0
+GCF	53.02	1
 # GC Content of last fragments. Use `grep ^GCL | cut -f 2-` to extract this part.
-GCL	14.07	0
-GCL	28.89	1
-GCL	30.40	3
-GCL	31.91	1
-GCL	33.42	2
-GCL	34.92	4
-GCL	36.18	8
-GCL	37.44	16
-GCL	38.94	31
-GCL	40.45	40
-GCL	41.96	39
-GCL	43.47	55
-GCL	44.72	46
-GCL	45.98	61
-GCL	47.49	53
-GCL	48.99	50
-GCL	50.50	32
-GCL	52.01	23
-GCL	53.52	11
-GCL	54.77	9
-GCL	56.03	8
-GCL	57.54	3
-GCL	61.06	1
+GCL	21.86	0
+GCL	44.22	2
+GCL	44.97	8
+GCL	45.48	4
+GCL	45.98	3
+GCL	46.48	5
+GCL	46.98	2
+GCL	47.49	3
+GCL	47.99	12
+GCL	48.49	13
+GCL	48.99	9
+GCL	49.50	2
+GCL	50.25	3
+GCL	51.01	6
+GCL	51.51	4
+GCL	52.01	1
+GCL	52.51	0
+GCL	53.02	1
 # ACGT content per cycle. Use `grep ^GCC | cut -f 2-` to extract this part. The columns are: cycle, and A,C,G,T counts [%]
-GCC	1	21.50	23.30	24.50	30.70
-GCC	2	21.10	22.20	22.50	34.20
-GCC	3	22.20	20.50	26.80	30.50
-GCC	4	24.40	21.50	21.50	32.60
-GCC	5	23.50	21.10	25.60	29.80
-GCC	6	26.30	21.80	20.40	31.50
-GCC	7	25.40	20.50	22.00	32.10
-GCC	8	23.90	19.20	27.00	29.90
-GCC	9	23.70	22.70	22.00	31.60
-GCC	10	22.50	22.00	24.10	31.40
-GCC	11	22.40	21.50	22.10	34.00
-GCC	12	25.20	18.00	24.50	32.30
-GCC	13	23.70	20.80	21.70	33.80
-GCC	14	24.60	23.00	22.40	30.00
-GCC	15	25.50	22.30	22.50	29.70
-GCC	16	24.10	21.40	23.60	30.90
-GCC	17	24.30	21.00	23.90	30.80
-GCC	18	24.40	22.10	22.70	30.80
-GCC	19	25.60	20.50	24.70	29.20
-GCC	20	25.80	19.60	22.00	32.60
-GCC	21	23.20	22.90	23.00	30.90
-GCC	22	23.90	22.70	22.60	30.80
-GCC	23	25.80	21.30	22.40	30.50
-GCC	24	23.50	22.00	22.70	31.80
-GCC	25	22.40	21.80	23.10	32.70
-GCC	26	22.90	19.90	24.30	32.90
-GCC	27	23.10	22.10	24.20	30.60
-GCC	28	23.50	22.10	22.90	31.50
-GCC	29	24.40	21.80	21.30	32.50
-GCC	30	21.90	22.50	22.60	33.00
-GCC	31	23.10	20.90	24.20	31.80
-GCC	32	24.60	22.10	23.60	29.70
-GCC	33	22.80	21.10	22.00	34.10
-GCC	34	21.70	22.10	23.60	32.60
-GCC	35	24.30	23.20	20.60	31.90
-GCC	36	21.60	22.70	24.50	31.20
-GCC	37	22.20	23.50	22.20	32.10
-GCC	38	24.10	20.80	22.00	33.10
-GCC	39	22.20	21.10	26.80	29.90
-GCC	40	21.80	24.00	22.90	31.30
-GCC	41	25.10	22.90	23.10	28.90
-GCC	42	25.50	22.70	22.20	29.60
-GCC	43	22.60	23.00	24.10	30.30
-GCC	44	21.70	21.60	24.20	32.50
-GCC	45	21.80	22.70	21.20	34.30
-GCC	46	22.80	22.00	23.80	31.40
-GCC	47	23.70	22.30	23.90	30.10
-GCC	48	24.30	21.70	24.80	29.20
-GCC	49	23.90	22.00	22.90	31.20
-GCC	50	23.50	22.40	22.80	31.30
-GCC	51	23.30	20.40	24.70	31.60
-GCC	52	23.30	20.20	25.10	31.40
-GCC	53	23.70	22.00	22.30	32.00
-GCC	54	23.30	21.30	25.40	30.00
-GCC	55	25.30	21.40	22.60	30.70
-GCC	56	24.40	24.10	19.20	32.30
-GCC	57	22.00	21.50	24.50	32.00
-GCC	58	24.90	21.20	24.20	29.70
-GCC	59	24.10	21.70	24.50	29.70
-GCC	60	24.80	20.90	25.10	29.20
-GCC	61	21.30	21.60	28.10	29.00
-GCC	62	23.80	21.80	21.70	32.70
-GCC	63	23.30	22.80	23.50	30.40
-GCC	64	24.00	21.40	23.50	31.10
-GCC	65	24.40	22.80	22.50	30.30
-GCC	66	24.70	22.30	21.40	31.60
-GCC	67	22.40	21.10	24.60	31.90
-GCC	68	24.60	22.90	20.60	31.90
-GCC	69	22.40	23.00	23.10	31.50
-GCC	70	23.50	19.50	23.90	33.10
-# Insert sizes. Use `grep ^IS | cut -f 2-` to extract this part. The columns are: pairs total, inward oriented pairs, outward oriented pairs, other pairs
-IS	0	0	0	0	0
-IS	1	0	0	0	0
-IS	2	0	0	0	0
-IS	3	0	0	0	0
-IS	4	0	0	0	0
-IS	5	0	0	0	0
-IS	6	0	0	0	0
-IS	7	0	0	0	0
-IS	8	0	0	0	0
-IS	9	0	0	0	0
-IS	10	0	0	0	0
-IS	11	0	0	0	0
-IS	12	0	0	0	0
-IS	13	0	0	0	0
-IS	14	0	0	0	0
-IS	15	0	0	0	0
-IS	16	0	0	0	0
-IS	17	0	0	0	0
-IS	18	0	0	0	0
-IS	19	0	0	0	0
-IS	20	0	0	0	0
-IS	21	0	0	0	0
-IS	22	0	0	0	0
-IS	23	0	0	0	0
-IS	24	0	0	0	0
-IS	25	0	0	0	0
-IS	26	0	0	0	0
-IS	27	0	0	0	0
-IS	28	0	0	0	0
-IS	29	0	0	0	0
-IS	30	0	0	0	0
-IS	31	0	0	0	0
-IS	32	0	0	0	0
-IS	33	0	0	0	0
-IS	34	0	0	0	0
-IS	35	0	0	0	0
-IS	36	0	0	0	0
-IS	37	0	0	0	0
-IS	38	0	0	0	0
-IS	39	0	0	0	0
-IS	40	0	0	0	0
-IS	41	0	0	0	0
-IS	42	0	0	0	0
-IS	43	0	0	0	0
-IS	44	0	0	0	0
-IS	45	0	0	0	0
-IS	46	0	0	0	0
-IS	47	0	0	0	0
-IS	48	0	0	0	0
-IS	49	0	0	0	0
-IS	50	0	0	0	0
-IS	51	0	0	0	0
-IS	52	0	0	0	0
-IS	53	0	0	0	0
-IS	54	0	0	0	0
-IS	55	0	0	0	0
-IS	56	0	0	0	0
-IS	57	0	0	0	0
-IS	58	0	0	0	0
-IS	59	0	0	0	0
-IS	60	0	0	0	0
-IS	61	0	0	0	0
-IS	62	0	0	0	0
-IS	63	0	0	0	0
-IS	64	0	0	0	0
-IS	65	0	0	0	0
-IS	66	0	0	0	0
-IS	67	0	0	0	0
-IS	68	0	0	0	0
-IS	69	0	0	0	0
-IS	70	0	0	0	0
-IS	71	0	0	0	0
-IS	72	0	0	0	0
-IS	73	0	0	0	0
-IS	74	0	0	0	0
-IS	75	0	0	0	0
-IS	76	0	0	0	0
-IS	77	0	0	0	0
-IS	78	0	0	0	0
-IS	79	0	0	0	0
-IS	80	0	0	0	0
-IS	81	0	0	0	0
-IS	82	0	0	0	0
-IS	83	0	0	0	0
-IS	84	0	0	0	0
-IS	85	0	0	0	0
-IS	86	0	0	0	0
-IS	87	0	0	0	0
-IS	88	0	0	0	0
-IS	89	0	0	0	0
-IS	90	0	0	0	0
-IS	91	0	0	0	0
-IS	92	0	0	0	0
-IS	93	0	0	0	0
-IS	94	0	0	0	0
-IS	95	0	0	0	0
-IS	96	0	0	0	0
-IS	97	0	0	0	0
-IS	98	0	0	0	0
-IS	99	0	0	0	0
-IS	100	0	0	0	0
-IS	101	0	0	0	0
-IS	102	0	0	0	0
-IS	103	0	0	0	0
-IS	104	0	0	0	0
-IS	105	0	0	0	0
-IS	106	0	0	0	0
-IS	107	0	0	0	0
-IS	108	0	0	0	0
-IS	109	0	0	0	0
-IS	110	0	0	0	0
-IS	111	0	0	0	0
-IS	112	0	0	0	0
-IS	113	0	0	0	0
-IS	114	0	0	0	0
-IS	115	0	0	0	0
-IS	116	0	0	0	0
-IS	117	0	0	0	0
-IS	118	0	0	0	0
-IS	119	0	0	0	0
-IS	120	0	0	0	0
-IS	121	0	0	0	0
-IS	122	0	0	0	0
-IS	123	0	0	0	0
-IS	124	0	0	0	0
-IS	125	0	0	0	0
-IS	126	0	0	0	0
-IS	127	0	0	0	0
-IS	128	0	0	0	0
-IS	129	0	0	0	0
-IS	130	0	0	0	0
-IS	131	0	0	0	0
-IS	132	0	0	0	0
-IS	133	0	0	0	0
-IS	134	0	0	0	0
-IS	135	0	0	0	0
-IS	136	0	0	0	0
-IS	137	0	0	0	0
-IS	138	0	0	0	0
-IS	139	0	0	0	0
-IS	140	0	0	0	0
-IS	141	0	0	0	0
-IS	142	0	0	0	0
-IS	143	0	0	0	0
-IS	144	0	0	0	0
-IS	145	0	0	0	0
-IS	146	0	0	0	0
-IS	147	0	0	0	0
-IS	148	0	0	0	0
-IS	149	0	0	0	0
-IS	150	0	0	0	0
-IS	151	0	0	0	0
-IS	152	0	0	0	0
-IS	153	0	0	0	0
-IS	154	0	0	0	0
-IS	155	0	0	0	0
-IS	156	0	0	0	0
-IS	157	0	0	0	0
-IS	158	0	0	0	0
-IS	159	0	0	0	0
-IS	160	0	0	0	0
-IS	161	0	0	0	0
-IS	162	0	0	0	0
-IS	163	0	0	0	0
-IS	164	0	0	0	0
-IS	165	0	0	0	0
-IS	166	0	0	0	0
-IS	167	0	0	0	0
-IS	168	0	0	0	0
-IS	169	0	0	0	0
-IS	170	0	0	0	0
-IS	171	0	0	0	0
-IS	172	0	0	0	0
-IS	173	0	0	0	0
-IS	174	0	0	0	0
-IS	175	0	0	0	0
-IS	176	0	0	0	0
-IS	177	0	0	0	0
-IS	178	0	0	0	0
-IS	179	0	0	0	0
-IS	180	0	0	0	0
-IS	181	0	0	0	0
-IS	182	0	0	0	0
-IS	183	0	0	0	0
-IS	184	0	0	0	0
-IS	185	0	0	0	0
-IS	186	0	0	0	0
-IS	187	0	0	0	0
-IS	188	0	0	0	0
-IS	189	0	0	0	0
-IS	190	0	0	0	0
-IS	191	0	0	0	0
-IS	192	0	0	0	0
-IS	193	0	0	0	0
-IS	194	0	0	0	0
-IS	195	0	0	0	0
-IS	196	0	0	0	0
-IS	197	0	0	0	0
-IS	198	0	0	0	0
-IS	199	0	0	0	0
-IS	200	0	0	0	0
-IS	201	0	0	0	0
-IS	202	0	0	0	0
-IS	203	0	0	0	0
-IS	204	0	0	0	0
-IS	205	0	0	0	0
-IS	206	0	0	0	0
-IS	207	0	0	0	0
-IS	208	0	0	0	0
-IS	209	0	0	0	0
-IS	210	0	0	0	0
-IS	211	0	0	0	0
-IS	212	0	0	0	0
-IS	213	0	0	0	0
-IS	214	0	0	0	0
-IS	215	0	0	0	0
-IS	216	0	0	0	0
-IS	217	0	0	0	0
-IS	218	0	0	0	0
-IS	219	0	0	0	0
-IS	220	0	0	0	0
-IS	221	0	0	0	0
-IS	222	0	0	0	0
-IS	223	0	0	0	0
-IS	224	0	0	0	0
-IS	225	0	0	0	0
-IS	226	0	0	0	0
-IS	227	0	0	0	0
-IS	228	0	0	0	0
-IS	229	0	0	0	0
-IS	230	0	0	0	0
-IS	231	0	0	0	0
-IS	232	0	0	0	0
-IS	233	0	0	0	0
-IS	234	0	0	0	0
-IS	235	0	0	0	0
-IS	236	0	0	0	0
-IS	237	0	0	0	0
-IS	238	0	0	0	0
-IS	239	0	0	0	0
-IS	240	0	0	0	0
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+GCC	135	16.50	23.50	30.50	29.50
+GCC	136	28.00	32.00	15.00	25.00
+GCC	137	22.50	21.50	30.50	25.50
+GCC	138	14.50	34.50	24.50	26.50
+GCC	139	20.50	29.50	24.50	25.50
+GCC	140	17.00	23.00	30.00	30.00
+GCC	141	20.50	23.50	25.50	30.50
+GCC	142	18.00	29.00	38.00	15.00
+GCC	143	22.00	24.00	27.00	27.00
+GCC	144	21.50	30.50	26.50	21.50
+GCC	145	22.00	21.00	29.00	28.00
+GCC	146	25.00	16.00	39.00	20.00
+GCC	147	26.50	22.50	30.50	20.50
+GCC	148	12.50	28.50	36.50	22.50
+GCC	149	26.50	23.50	23.50	26.50
+GCC	150	14.00	29.00	24.00	33.00
+GCC	151	19.50	30.50	32.50	17.50
+GCC	152	18.50	17.50	29.50	34.50
+GCC	153	22.50	22.50	31.50	23.50
+GCC	154	22.00	21.00	29.00	28.00
+GCC	155	21.00	26.00	19.00	34.00
+GCC	156	14.50	23.50	35.50	26.50
+GCC	157	22.00	31.00	23.00	24.00
+GCC	158	22.50	29.50	24.50	23.50
+GCC	159	17.50	12.50	46.50	23.50
+GCC	160	24.50	26.50	26.50	22.50
+GCC	161	13.00	23.00	45.00	19.00
+GCC	162	31.50	16.50	22.50	29.50
+GCC	163	19.50	21.50	35.50	23.50
+GCC	164	29.00	18.00	21.00	32.00
+GCC	165	14.50	17.50	35.50	32.50
+GCC	166	17.50	37.50	28.50	16.50
+GCC	167	16.50	21.50	31.50	30.50
+GCC	168	14.00	25.00	30.00	31.00
+GCC	169	18.50	20.50	23.50	37.50
+GCC	170	19.00	23.00	28.00	30.00
+GCC	171	20.00	28.00	33.00	19.00
+GCC	172	19.00	20.00	32.00	29.00
+GCC	173	24.50	16.50	33.50	25.50
+GCC	174	17.50	23.50	33.50	25.50
+GCC	175	33.50	17.50	35.50	13.50
+GCC	176	16.50	32.50	28.50	22.50
+GCC	177	19.00	22.00	27.00	32.00
+GCC	178	16.00	26.00	30.00	28.00
+GCC	179	18.00	18.00	22.00	42.00
+GCC	180	21.00	22.00	34.00	23.00
+GCC	181	20.50	19.50	35.50	24.50
+GCC	182	32.50	18.50	22.50	26.50
+GCC	183	24.50	13.50	28.50	33.50
+GCC	184	15.00	29.00	30.00	26.00
+GCC	185	15.00	32.00	33.00	20.00
+GCC	186	22.50	23.50	34.50	19.50
+GCC	187	19.00	14.00	40.00	27.00
+GCC	188	27.50	21.50	27.50	23.50
+GCC	189	17.00	22.00	34.00	27.00
+GCC	190	23.00	30.00	23.00	24.00
+GCC	191	25.00	22.00	28.00	25.00
+GCC	192	34.50	24.50	13.50	27.50
+GCC	193	18.50	25.50	25.50	30.50
+GCC	194	18.50	33.50	24.50	23.50
+GCC	195	16.00	26.00	23.00	35.00
+GCC	196	21.50	25.50	24.50	28.50
+GCC	197	20.00	21.00	23.00	36.00
+GCC	198	17.00	21.00	37.00	25.00
+GCC	199	20.50	18.50	25.50	35.50
+GCC	200	21.00	29.00	21.00	29.00
+GCC	201	27.00	21.00	23.00	29.00
+GCC	202	21.50	24.50	19.50	34.50
+GCC	203	21.50	24.50	26.50	27.50
+GCC	204	27.00	29.00	24.00	20.00
+GCC	205	19.50	21.50	22.50	36.50
+GCC	206	26.50	24.50	21.50	27.50
+GCC	207	22.50	21.50	19.50	36.50
+GCC	208	14.00	35.00	29.00	22.00
+GCC	209	16.00	23.00	12.00	49.00
+GCC	210	18.50	19.50	40.50	21.50
+GCC	211	26.00	20.00	22.00	32.00
+GCC	212	21.00	31.00	18.00	30.00
+GCC	213	24.00	15.00	31.00	30.00
+GCC	214	17.50	24.50	25.50	32.50
+GCC	215	26.00	24.00	23.00	27.00
+GCC	216	21.50	17.50	25.50	35.50
+GCC	217	26.00	29.00	17.00	28.00
+GCC	218	20.00	27.00	21.00	32.00
+GCC	219	17.00	21.00	21.00	41.00
+GCC	220	25.50	23.50	23.50	27.50
+GCC	221	21.50	23.50	20.50	34.50
+GCC	222	21.50	21.50	18.50	38.50
+GCC	223	20.00	27.00	28.00	25.00
+GCC	224	22.50	22.50	24.50	30.50
+GCC	225	14.50	35.50	30.50	19.50
+GCC	226	20.00	23.00	26.00	31.00
+GCC	227	20.50	24.50	23.50	31.50
+GCC	228	33.00	19.00	26.00	22.00
+GCC	229	22.50	24.50	18.50	34.50
+GCC	230	21.00	32.00	16.00	31.00
+GCC	231	23.00	28.00	30.00	19.00
+GCC	232	23.50	21.50	12.50	42.50
+GCC	233	21.00	27.00	25.00	27.00
+GCC	234	16.50	27.50	22.50	33.50
+GCC	235	20.00	15.00	28.00	37.00
+GCC	236	28.00	23.00	21.00	28.00
+GCC	237	20.50	19.50	22.50	37.50
+GCC	238	21.50	29.50	24.50	24.50
+GCC	239	20.00	8.00	17.00	55.00
+GCC	240	28.00	24.00	16.00	32.00
+GCC	241	22.50	22.50	16.50	38.50
+GCC	242	29.00	25.00	13.00	33.00
+GCC	243	22.50	15.50	23.50	38.50
+GCC	244	20.50	23.50	16.50	39.50
+GCC	245	28.00	23.00	19.00	30.00
+GCC	246	21.00	29.00	25.00	25.00
+GCC	247	32.00	14.00	13.00	41.00
+GCC	248	18.00	18.00	25.00	39.00
+GCC	249	25.00	23.00	21.00	31.00
+GCC	250	27.50	22.50	17.50	32.50
+GCC	251	13.50	20.50	36.50	29.50
+# Insert sizes. Use `grep ^IS | cut -f 2-` to extract this part. The columns are: insert size, pairs total, inward oriented pairs, outward oriented pairs, other pairs
 # Read lengths. Use `grep ^RL | cut -f 2-` to extract this part. The columns are: read length, count
-RL	70	1000
+RL	251	200
 # Indel distribution. Use `grep ^ID | cut -f 2-` to extract this part. The columns are: length, number of insertions, number of deletions
-ID	1	0	1
+ID	1	1	0
+ID	2	1	0
+ID	4	2	0
+ID	10	5	0
+ID	13	1	0
+ID	14	1	0
+ID	15	1	0
+ID	18	1	0
+ID	21	1	0
+ID	22	1	0
+ID	23	2	0
+ID	24	3	0
+ID	29	1	0
+ID	35	2	0
+ID	38	2	0
 # Indels per cycle. Use `grep ^IC | cut -f 2-` to extract this part. The columns are: cycle, number of insertions (fwd), .. (rev) , number of deletions (fwd), .. (rev)
-IC	8	0	0	1	0
+IC	2	1	0	0	0
+IC	4	2	0	0	0
+IC	5	3	0	0	0
+IC	210	2	0	0	0
+IC	219	1	0	0	0
+IC	220	1	0	0	0
+IC	224	2	0	0	0
+IC	225	2	0	0	0
+IC	226	1	0	0	0
+IC	228	1	0	0	0
+IC	230	1	0	0	0
+IC	233	1	0	0	0
+IC	234	1	0	0	0
+IC	235	1	0	0	0
+IC	236	1	0	0	0
+IC	239	1	0	0	0
+IC	240	1	0	0	0
+IC	241	1	0	0	0
+IC	247	1	0	0	0
 # Coverage distribution. Use `grep ^COV | cut -f 2-` to extract this part.
-COV	[1-1]	1	42
-COV	[2-2]	2	59
-COV	[3-3]	3	73
-COV	[4-4]	4	98
-COV	[5-5]	5	128
-COV	[6-6]	6	142
-COV	[7-7]	7	226
-COV	[8-8]	8	241
-COV	[9-9]	9	281
-COV	[10-10]	10	400
-COV	[11-11]	11	450
-COV	[12-12]	12	444
-COV	[13-13]	13	433
-COV	[14-14]	14	423
-COV	[15-15]	15	392
-COV	[16-16]	16	434
-COV	[17-17]	17	294
-COV	[18-18]	18	229
-COV	[19-19]	19	143
-COV	[20-20]	20	143
-COV	[21-21]	21	149
-COV	[22-22]	22	90
-COV	[23-23]	23	41
-COV	[24-24]	24	14
+COV	[1-1]	1	1
+COV	[7-7]	7	1
+COV	[18-18]	18	1
+COV	[24-24]	24	1
+COV	[25-25]	25	249
 # GC-depth. Use `grep ^GCD | cut -f 2-` to extract this part. The columns are: GC%, unique sequence percentiles, 10th, 25th, 50th, 75th and 90th depth percentile
-GCD	0.0	50.000	0.000	0.000	0.000	0.000	0.000
-GCD	44.0	75.000	14.875	14.875	14.875	14.875	14.875
-GCD	46.0	100.000	11.900	11.900	11.900	11.900	11.900
+GCD	0.0	100.000	0.000	0.000	0.000	0.000	0.000
diff -r cd6eb75c9819 -r cc56fc603e53 test-data/samtools_stats_out2.tab
--- a/test-data/samtools_stats_out2.tab	Mon Oct 20 14:56:49 2014 -0400
+++ b/test-data/samtools_stats_out2.tab	Tue Oct 13 12:56:27 2015 -0400
@@ -1,951 +1,1137 @@
-# This file was produced by samtools stats (1.1+htslib-1.1) and can be plotted using plot-bamstats
-# The command line was:  stats --coverage 1,1000,1 --GC-depth 2000.0 --insert-size 8000 --most-inserts 0.99 --trim-quality 0 /tmp/tmpFDCqQD/tmprMv9KZ/database/files/000/dataset_893.dat
+# This file was produced by samtools stats (1.2+htslib-1.2.1) and can be plotted using plot-bamstats
+# The command line was:  stats --coverage 1,1000,1 --GC-depth 20000.0 --insert-size 8000 --most-inserts 0.99 --trim-quality 0 --ref-seq /Users/anton/galaxy-git/database/files/000/dataset_9.dat /Users/anton/galaxy-git/database/files/000/dataset_10.dat
 # CHK, Checksum	[2]Read Names	[3]Sequences	[4]Qualities
 # CHK, CRC32 of reads which passed filtering followed by addition (32bit overflow)
-CHK	76594422	342222f2	06e86208
+CHK	1bd20fd8	58ad2167	29883386
 # Summary Numbers. Use `grep ^SN | cut -f 2-` to extract this part.
-SN	raw total sequences:	1000
+SN	raw total sequences:	200
 SN	filtered sequences:	0
-SN	sequences:	1000
+SN	sequences:	200
 SN	is sorted:	1
-SN	1st fragments:	500
-SN	last fragments:	500
-SN	reads mapped:	972
-SN	reads mapped and paired:	954	# paired-end technology bit set + both mates mapped
-SN	reads unmapped:	28
+SN	1st fragments:	100
+SN	last fragments:	100
+SN	reads mapped:	25
+SN	reads mapped and paired:	0	# paired-end technology bit set + both mates mapped
+SN	reads unmapped:	175
 SN	reads properly paired:	0	# proper-pair bit set
-SN	reads paired:	1000	# paired-end technology bit set
+SN	reads paired:	200	# paired-end technology bit set
 SN	reads duplicated:	0	# PCR or optical duplicate bit set
-SN	reads MQ0:	0	# mapped and MQ=0
+SN	reads MQ0:	6	# mapped and MQ=0
 SN	reads QC failed:	0
 SN	non-primary alignments:	0
-SN	total length:	70000	# ignores clipping
-SN	bases mapped:	68040	# ignores clipping
-SN	bases mapped (cigar):	68040	# more accurate
+SN	total length:	50200	# ignores clipping
+SN	bases mapped:	6275	# ignores clipping
+SN	bases mapped (cigar):	6275	# more accurate
 SN	bases trimmed:	0
 SN	bases duplicated:	0
-SN	mismatches:	1237	# from NM fields
-SN	error rate:	1.818048e-02	# mismatches / bases mapped (cigar)
-SN	average length:	70
-SN	maximum length:	70
-SN	average quality:	17.0
-SN	insert size average:	495.1
-SN	insert size standard deviation:	48.9
-SN	inward oriented pairs:	477
+SN	mismatches:	591	# from NM fields
+SN	error rate:	9.418327e-02	# mismatches / bases mapped (cigar)
+SN	average length:	251
+SN	maximum length:	251
+SN	average quality:	34.7
+SN	insert size average:	0.0
+SN	insert size standard deviation:	0.0
+SN	inward oriented pairs:	0
 SN	outward oriented pairs:	0
 SN	pairs with other orientation:	0
 SN	pairs on different chromosomes:	0
 # First Fragment Qualitites. Use `grep ^FFQ | cut -f 2-` to extract this part.
 # Columns correspond to qualities and rows to cycles. First column is the cycle number.
-FFQ	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	500	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
-FFQ	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	500	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
-FFQ	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	500	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
-FFQ	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	500	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
-FFQ	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	500	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
-FFQ	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	500	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
-FFQ	7	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	500	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
-FFQ	8	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	500	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
-FFQ	9	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	500	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
-FFQ	10	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	500	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
-FFQ	11	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	500	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
-FFQ	12	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	500	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
-FFQ	13	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	500	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
-FFQ	14	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	500	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
-FFQ	15	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	500	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
-FFQ	16	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	500	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
-FFQ	17	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	500	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
-FFQ	18	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	500	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
-FFQ	19	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	500	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
-FFQ	20	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	500	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
-FFQ	21	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	500	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
-FFQ	22	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	500	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
-FFQ	23	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	500	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
-FFQ	24	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	500	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
-FFQ	25	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	500	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
-FFQ	26	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	500	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
-FFQ	27	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	500	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
-FFQ	28	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	500	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
-FFQ	29	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	500	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
-FFQ	30	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	500	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
-FFQ	31	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	500	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
-FFQ	32	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	500	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
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+FFQ	228	0	0	0	0	0	0	0	0	0	0	0	0	10	8	6	2	0	0	0	0	0	0	0	0	6	1	6	0	1	2	1	1	4	13	1	2	1	35	0	0	0	0
+FFQ	229	0	0	0	0	0	0	0	0	0	0	0	0	4	11	6	6	0	0	0	0	0	0	0	0	1	3	5	0	0	0	0	2	6	13	0	3	5	35	0	0	0	0
+FFQ	230	0	0	0	0	0	0	0	0	0	0	0	0	4	11	10	7	0	0	0	0	0	0	0	0	2	3	4	0	0	0	1	2	9	10	0	1	1	35	0	0	0	0
+FFQ	231	0	0	0	0	0	0	0	0	0	0	0	0	6	7	6	6	0	0	0	0	0	0	0	0	4	5	4	0	1	0	1	0	4	13	1	5	5	32	0	0	0	0
+FFQ	232	0	0	0	0	0	0	0	0	0	0	0	0	3	7	10	4	0	0	0	0	0	0	0	0	6	4	7	0	0	0	0	0	3	12	0	1	3	40	0	0	0	0
+FFQ	233	0	0	0	0	0	0	0	0	0	0	0	0	7	7	9	8	0	0	0	0	0	0	0	0	5	5	3	1	1	0	0	0	6	10	1	1	4	32	0	0	0	0
+FFQ	234	0	0	0	0	0	0	0	0	0	0	0	0	9	6	10	5	0	0	0	0	0	0	0	0	5	5	3	1	0	0	0	1	5	11	0	1	4	34	0	0	0	0
+FFQ	235	0	0	0	0	0	0	0	0	0	0	0	0	4	10	13	7	0	0	0	0	0	0	0	0	5	1	4	0	0	0	2	1	5	7	0	0	4	37	0	0	0	0
+FFQ	236	0	0	0	0	0	0	0	0	0	0	0	0	7	8	15	6	0	0	0	0	0	0	0	0	7	3	5	1	0	0	0	1	6	8	0	1	1	31	0	0	0	0
+FFQ	237	0	0	0	0	0	0	0	0	0	0	0	0	2	9	13	6	0	0	0	0	0	0	0	0	6	4	7	1	0	0	0	1	3	12	0	1	1	34	0	0	0	0
+FFQ	238	0	0	0	0	0	0	0	0	0	0	0	0	2	10	16	6	0	0	0	0	0	0	0	0	9	2	3	0	0	0	0	0	5	9	0	2	3	33	0	0	0	0
+FFQ	239	0	0	0	0	0	0	0	0	0	0	0	0	4	5	17	9	0	0	0	0	0	0	0	0	7	3	1	0	0	0	1	1	2	15	0	1	3	31	0	0	0	0
+FFQ	240	0	0	0	0	0	0	0	0	0	0	0	0	0	10	19	6	0	0	0	0	0	0	0	0	6	4	4	0	0	1	3	0	2	13	0	1	1	30	0	0	0	0
+FFQ	241	0	0	0	0	0	0	0	0	0	0	0	0	1	4	23	9	0	0	0	0	0	0	0	0	7	5	8	1	0	0	2	1	1	8	0	1	3	26	0	0	0	0
+FFQ	242	0	0	0	0	0	0	0	0	0	0	0	0	3	10	19	10	0	0	0	0	0	0	0	0	2	5	4	1	0	0	0	1	2	10	0	0	2	31	0	0	0	0
+FFQ	243	0	0	0	0	0	0	0	0	0	0	0	0	2	2	17	14	0	0	0	0	0	0	0	0	6	5	5	0	0	0	0	0	6	13	0	2	3	25	0	0	0	0
+FFQ	244	0	0	0	0	0	0	0	0	0	0	0	0	1	3	18	11	0	0	0	0	0	0	0	0	6	5	5	1	0	0	1	0	2	12	0	5	1	29	0	0	0	0
+FFQ	245	0	0	0	0	0	0	0	0	0	0	0	0	1	8	14	11	0	0	0	0	0	0	0	0	8	5	3	1	0	0	1	0	1	15	1	1	3	27	0	0	0	0
+FFQ	246	0	0	0	0	0	0	0	0	0	0	0	0	4	6	15	12	0	0	0	0	0	0	0	0	5	2	8	1	0	1	1	0	1	13	0	2	1	28	0	0	0	0
+FFQ	247	0	0	0	0	0	0	0	0	0	0	0	0	8	3	16	14	0	0	0	0	0	0	0	0	10	4	6	0	0	0	0	0	2	15	1	2	2	17	0	0	0	0
+FFQ	248	0	0	0	0	0	0	0	0	0	0	0	0	5	6	21	8	0	0	0	0	0	0	0	0	7	8	6	2	0	0	0	1	1	14	0	2	2	17	0	0	0	0
+FFQ	249	0	0	0	0	0	0	0	0	0	0	0	0	5	6	20	8	0	0	0	0	0	0	0	0	5	7	10	0	1	0	0	0	1	15	0	2	0	20	0	0	0	0
+FFQ	250	0	0	0	0	0	0	0	0	0	0	0	0	2	10	15	10	0	0	0	0	0	0	0	0	9	5	8	1	0	0	0	2	6	10	0	0	2	20	0	0	0	0
+FFQ	251	0	0	0	0	0	0	0	0	0	0	0	0	7	20	21	17	0	0	0	0	0	0	0	0	7	7	6	0	0	0	0	1	2	4	0	0	0	8	0	0	0	0
+FFQ	252	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
 # Last Fragment Qualitites. Use `grep ^LFQ | cut -f 2-` to extract this part.
 # Columns correspond to qualities and rows to cycles. First column is the cycle number.
-LFQ	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	500	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
-LFQ	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	500	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
-LFQ	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	500	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
-LFQ	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	500	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
-LFQ	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	500	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
-LFQ	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	500	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
-LFQ	7	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	500	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
-LFQ	8	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	500	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
-LFQ	9	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	500	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
-LFQ	10	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	500	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
-LFQ	11	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	500	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
-LFQ	12	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	500	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
-LFQ	13	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	500	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
-LFQ	14	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	500	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
-LFQ	15	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	500	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
-LFQ	16	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	500	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
-LFQ	17	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	500	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
-LFQ	18	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	500	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
-LFQ	19	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	500	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
-LFQ	20	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	500	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
-LFQ	21	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	500	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
-LFQ	22	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	500	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
-LFQ	23	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	500	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
-LFQ	24	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	500	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
-LFQ	25	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	500	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
-LFQ	26	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	500	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
-LFQ	27	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	500	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
-LFQ	28	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	500	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
-LFQ	29	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	500	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
-LFQ	30	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	500	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
-LFQ	31	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	500	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
-LFQ	32	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	500	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
-LFQ	33	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	500	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
-LFQ	34	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	500	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
-LFQ	35	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	500	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
-LFQ	36	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	500	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
-LFQ	37	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	500	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
-LFQ	38	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	500	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
-LFQ	39	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	500	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
-LFQ	40	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	500	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
-LFQ	41	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	500	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
-LFQ	42	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	500	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
-LFQ	43	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	500	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
-LFQ	44	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	500	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
-LFQ	45	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	500	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
-LFQ	46	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	500	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
-LFQ	47	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	500	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
-LFQ	48	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	500	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
-LFQ	49	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	500	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
-LFQ	50	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	500	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
-LFQ	51	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	500	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
-LFQ	52	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	500	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
-LFQ	53	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	500	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
-LFQ	54	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	500	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
-LFQ	55	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	500	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
-LFQ	56	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	500	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
-LFQ	57	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	500	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
-LFQ	58	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	500	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
-LFQ	59	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	500	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
-LFQ	60	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	500	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
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+LFQ	168	0	0	0	0	0	0	0	0	0	0	0	0	3	1	1	1	0	0	0	0	0	0	0	0	0	2	1	1	0	1	2	1	3	3	10	2	4	37	11	16	0	0
+LFQ	169	0	0	0	0	0	0	0	0	0	0	0	0	6	6	3	1	1	0	0	0	0	0	0	0	0	4	3	0	1	0	2	3	3	4	3	0	2	35	9	14	0	0
+LFQ	170	0	0	0	0	0	0	0	0	0	0	0	0	2	6	1	0	0	0	0	0	0	0	0	0	0	5	5	0	0	2	1	2	2	6	5	3	3	39	8	10	0	0
+LFQ	171	0	0	0	0	0	0	0	0	0	0	0	0	2	2	1	0	0	0	0	0	0	0	0	0	0	3	2	0	0	0	3	3	2	5	8	5	7	36	10	11	0	0
+LFQ	172	0	0	0	0	0	0	0	0	0	0	0	0	6	5	0	1	0	0	0	0	0	0	0	0	0	0	3	1	0	0	3	0	3	4	5	6	4	32	15	12	0	0
+LFQ	173	0	0	0	0	0	0	0	0	0	0	0	0	4	1	1	0	0	0	0	0	0	0	0	0	1	0	4	0	0	0	0	0	6	4	4	5	4	37	18	11	0	0
+LFQ	174	0	0	0	0	0	0	0	0	0	0	0	0	4	2	1	1	0	0	0	0	0	0	0	0	1	1	2	1	0	0	0	3	3	4	7	3	5	36	12	14	0	0
+LFQ	175	0	0	0	0	0	0	0	0	0	0	0	0	4	2	0	2	0	0	0	0	0	0	0	0	0	2	2	1	0	0	3	3	6	3	10	3	4	30	13	12	0	0
+LFQ	176	0	0	0	0	0	0	0	0	0	0	0	0	3	1	1	5	0	0	0	0	0	0	0	0	0	1	4	1	1	3	2	1	2	3	4	3	2	42	7	14	0	0
+LFQ	177	0	0	0	0	0	0	0	0	0	0	0	0	3	3	2	4	0	0	0	0	0	0	0	0	1	2	2	0	0	1	2	1	1	5	5	7	3	33	11	14	0	0
+LFQ	178	0	0	0	0	0	0	0	0	0	0	0	0	1	3	1	3	0	0	0	0	0	0	0	0	1	3	1	0	0	0	0	0	3	6	9	2	8	39	10	10	0	0
+LFQ	179	0	0	0	0	0	0	0	0	0	0	0	0	2	4	2	3	0	0	0	0	0	0	0	0	1	1	2	0	0	0	1	1	1	7	8	2	6	36	10	13	0	0
+LFQ	180	0	0	0	0	0	0	0	0	0	0	0	0	1	4	3	3	0	0	0	0	0	0	0	0	3	1	1	0	0	0	3	0	4	3	4	2	8	41	13	6	0	0
+LFQ	181	0	0	0	0	0	0	0	0	0	0	0	0	3	0	1	2	0	0	0	0	0	0	0	0	1	1	2	0	0	0	2	1	6	10	5	5	4	39	10	8	0	0
+LFQ	182	0	0	0	0	0	0	0	0	0	0	0	0	4	0	0	1	0	0	0	0	0	0	0	0	5	1	2	0	0	0	2	1	2	5	4	2	3	46	19	3	0	0
+LFQ	183	0	0	0	0	0	0	0	0	0	0	0	0	4	1	0	3	0	0	0	0	0	0	0	0	1	0	0	1	0	2	1	0	1	8	6	4	7	43	14	4	0	0
+LFQ	184	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	4	0	0	0	0	0	0	0	0	2	1	1	0	1	0	0	3	3	4	6	3	5	55	8	2	0	0
+LFQ	185	0	0	0	0	0	0	0	0	0	0	0	0	3	2	1	3	0	0	0	0	0	0	0	0	0	1	2	0	1	1	1	1	2	7	2	4	8	47	9	5	0	0
+LFQ	186	0	0	0	0	0	0	0	0	0	0	0	0	1	1	4	6	0	0	0	0	0	0	0	0	2	0	5	0	0	0	1	1	3	11	5	5	4	37	11	3	0	0
+LFQ	187	0	0	0	0	0	0	0	0	0	0	0	0	4	1	3	3	0	0	0	0	0	0	0	0	5	1	1	0	2	0	1	1	6	10	3	2	3	41	10	3	0	0
+LFQ	188	0	0	0	0	0	0	0	0	0	0	0	0	0	5	1	3	0	0	0	0	0	0	0	0	2	4	7	0	1	0	3	2	7	7	6	3	4	34	9	2	0	0
+LFQ	189	0	0	0	0	0	0	0	0	0	0	0	0	3	4	3	4	0	0	0	0	0	0	0	0	4	0	5	2	0	0	5	0	6	8	3	8	8	30	6	1	0	0
+LFQ	190	0	0	0	0	0	0	0	0	0	0	0	0	5	5	3	6	0	0	0	0	0	0	0	0	2	1	3	0	1	0	2	2	7	11	1	8	3	34	6	0	0	0
+LFQ	191	0	0	0	0	0	0	0	0	0	0	0	0	5	7	2	4	0	0	0	0	0	0	0	0	3	0	3	0	0	0	1	0	4	5	9	6	12	33	6	0	0	0
+LFQ	192	0	0	0	0	0	0	0	0	0	0	0	0	3	3	2	6	0	0	0	0	0	0	0	0	3	3	6	0	1	0	0	1	5	9	4	4	5	38	7	0	0	0
+LFQ	193	0	0	0	0	0	0	0	0	0	0	0	0	1	1	2	7	0	0	0	0	0	0	0	0	4	3	3	0	0	0	0	0	5	10	4	2	11	43	4	0	0	0
+LFQ	194	0	0	0	0	0	0	0	0	0	0	0	0	1	1	1	6	0	0	0	0	0	0	0	0	5	1	8	0	1	0	1	0	4	8	2	7	3	43	8	0	0	0
+LFQ	195	0	0	0	0	0	0	0	0	0	0	0	0	4	1	2	8	0	0	0	0	0	0	0	0	0	0	4	0	1	0	3	0	2	13	1	4	8	39	10	0	0	0
+LFQ	196	0	0	0	0	0	0	0	0	0	0	0	0	1	6	1	3	0	0	0	0	0	0	0	0	1	1	3	0	2	0	1	1	4	11	2	1	9	43	10	0	0	0
+LFQ	197	0	0	0	0	0	0	0	0	0	0	0	0	2	0	2	10	0	0	0	0	0	0	0	0	3	0	1	0	0	0	2	1	6	10	2	0	4	47	10	0	0	0
+LFQ	198	0	0	0	0	0	0	0	0	0	0	0	0	2	4	4	7	0	0	0	0	0	0	0	0	1	0	5	1	2	1	0	0	1	7	4	2	4	47	8	0	0	0
+LFQ	199	0	0	0	0	0	0	0	0	0	0	0	0	1	4	5	6	0	0	0	0	0	0	0	0	3	2	7	0	0	0	1	0	3	7	3	3	7	39	9	0	0	0
+LFQ	200	0	0	0	0	0	0	0	0	0	0	0	0	0	5	2	8	0	0	0	0	0	0	0	0	5	1	1	0	1	0	2	0	5	12	5	5	3	40	5	0	0	0
+LFQ	201	0	0	0	0	0	0	0	0	0	0	0	0	2	1	6	7	0	0	0	0	0	0	0	0	5	0	4	0	0	0	1	1	7	8	1	0	4	47	6	0	0	0
+LFQ	202	0	0	0	0	0	0	0	0	0	0	0	0	6	7	3	8	0	0	0	0	0	0	0	0	3	3	1	0	0	0	1	0	4	12	2	3	2	34	11	0	0	0
+LFQ	203	0	0	0	0	0	0	0	0	0	0	0	0	8	5	2	5	0	0	0	0	0	0	0	0	2	0	4	0	1	0	1	1	4	9	7	2	2	37	10	0	0	0
+LFQ	204	0	0	0	0	0	0	0	0	0	0	0	0	2	5	1	6	0	0	0	0	0	0	0	0	4	3	5	0	0	0	0	0	5	11	3	3	5	41	6	0	0	0
+LFQ	205	0	0	0	0	0	0	0	0	0	0	0	0	5	11	1	5	0	0	0	0	0	0	0	0	3	0	3	0	0	0	2	0	4	18	2	4	4	33	5	0	0	0
+LFQ	206	0	0	0	0	0	0	0	0	0	0	0	0	3	7	2	5	0	0	0	0	0	0	0	0	4	5	7	0	0	0	0	0	2	13	0	3	4	37	8	0	0	0
+LFQ	207	0	0	0	0	0	0	0	0	0	0	0	0	1	6	5	6	0	0	0	0	0	0	0	0	4	2	4	0	2	0	4	1	3	10	4	2	3	36	7	0	0	0
+LFQ	208	0	0	0	0	0	0	0	0	0	0	0	0	1	4	3	4	0	0	0	0	0	0	0	0	6	4	4	0	0	0	1	0	9	11	2	5	3	36	7	0	0	0
+LFQ	209	0	0	0	0	0	0	0	0	0	0	0	0	2	7	4	8	0	0	0	0	0	0	0	0	3	2	4	0	0	0	3	0	8	14	2	1	2	33	7	0	0	0
+LFQ	210	0	0	0	0	0	0	0	0	0	0	0	0	1	5	6	7	0	0	0	0	0	0	0	0	4	3	3	0	0	0	3	0	6	6	0	3	5	43	5	0	0	0
+LFQ	211	0	0	0	0	0	0	0	0	0	0	0	0	2	5	6	4	0	0	0	0	0	0	0	0	6	3	5	0	0	0	0	2	5	11	4	3	3	35	6	0	0	0
+LFQ	212	0	0	0	0	0	0	0	0	0	0	0	0	0	3	6	7	0	0	0	0	0	0	0	0	3	4	8	0	0	0	0	0	5	17	1	1	4	35	6	0	0	0
+LFQ	213	0	0	0	0	0	0	0	0	0	0	0	0	6	6	10	5	0	0	0	0	0	0	0	0	5	3	1	0	0	0	0	1	4	7	1	5	2	43	1	0	0	0
+LFQ	214	0	0	0	0	0	0	0	0	0	0	0	0	4	9	4	10	0	0	0	0	0	0	0	0	4	1	6	0	2	0	1	1	3	9	0	2	3	39	2	0	0	0
+LFQ	215	0	0	0	0	0	0	0	0	0	0	0	0	5	6	5	6	0	0	0	0	0	0	0	0	5	5	8	0	0	0	1	2	5	12	0	0	4	34	2	0	0	0
+LFQ	216	0	0	0	0	0	0	0	0	0	0	0	0	3	3	6	5	0	0	0	0	0	0	0	0	3	6	5	1	3	0	1	0	5	15	1	3	2	37	1	0	0	0
+LFQ	217	0	0	0	0	0	0	0	0	0	0	0	0	3	7	6	4	0	0	0	0	0	0	0	0	4	1	2	0	0	1	1	0	10	15	1	3	2	39	1	0	0	0
+LFQ	218	0	0	0	0	0	0	0	0	0	0	0	0	2	4	7	2	0	0	0	0	0	0	0	0	6	4	10	0	0	0	1	0	3	13	1	5	3	35	4	0	0	0
+LFQ	219	0	0	0	0	0	0	0	0	0	0	0	0	2	5	4	4	0	0	0	0	0	0	0	0	5	1	5	0	0	1	0	0	4	13	1	6	3	45	1	0	0	0
+LFQ	220	0	0	0	0	0	0	0	0	0	0	0	0	2	4	9	4	0	0	0	0	0	0	0	0	4	2	2	0	0	0	0	2	5	14	1	1	2	47	1	0	0	0
+LFQ	221	0	0	0	0	0	0	0	0	0	0	0	0	3	4	6	4	0	0	0	0	0	0	0	0	1	4	6	0	0	0	0	0	2	10	1	3	3	53	0	0	0	0
+LFQ	222	0	0	0	0	0	0	0	0	0	0	0	0	3	5	8	6	0	0	0	0	0	0	0	0	5	2	6	0	0	0	0	0	2	6	1	3	4	49	0	0	0	0
+LFQ	223	0	0	0	0	0	0	0	0	0	0	0	0	5	8	6	8	0	0	0	0	0	0	0	0	3	3	5	1	1	0	1	0	0	13	1	0	2	43	0	0	0	0
+LFQ	224	0	0	0	0	0	0	0	0	0	0	0	0	2	9	11	6	0	0	0	0	0	0	0	0	4	3	3	0	0	0	0	1	2	15	1	0	1	42	0	0	0	0
+LFQ	225	0	0	0	0	0	0	0	0	0	0	0	0	4	8	2	4	0	0	0	0	0	0	0	0	7	3	10	0	2	0	0	0	3	10	1	2	5	39	0	0	0	0
+LFQ	226	0	0	0	0	0	0	0	0	0	0	0	0	5	9	3	7	0	0	0	0	0	0	0	0	8	5	5	0	1	0	2	1	3	13	0	2	3	33	0	0	0	0
+LFQ	227	0	0	0	0	0	0	0	0	0	0	0	0	10	8	4	5	0	0	0	0	0	0	0	0	3	2	3	0	0	0	2	3	5	17	0	3	2	33	0	0	0	0
+LFQ	228	0	0	0	0	0	0	0	0	0	0	0	0	10	8	6	2	0	0	0	0	0	0	0	0	6	1	6	0	1	2	1	1	4	13	1	2	1	35	0	0	0	0
+LFQ	229	0	0	0	0	0	0	0	0	0	0	0	0	4	11	6	6	0	0	0	0	0	0	0	0	1	3	5	0	0	0	0	2	6	13	0	3	5	35	0	0	0	0
+LFQ	230	0	0	0	0	0	0	0	0	0	0	0	0	4	11	10	7	0	0	0	0	0	0	0	0	2	3	4	0	0	0	1	2	9	10	0	1	1	35	0	0	0	0
+LFQ	231	0	0	0	0	0	0	0	0	0	0	0	0	6	7	6	6	0	0	0	0	0	0	0	0	4	5	4	0	1	0	1	0	4	13	1	5	5	32	0	0	0	0
+LFQ	232	0	0	0	0	0	0	0	0	0	0	0	0	3	7	10	4	0	0	0	0	0	0	0	0	6	4	7	0	0	0	0	0	3	12	0	1	3	40	0	0	0	0
+LFQ	233	0	0	0	0	0	0	0	0	0	0	0	0	7	7	9	8	0	0	0	0	0	0	0	0	5	5	3	1	1	0	0	0	6	10	1	1	4	32	0	0	0	0
+LFQ	234	0	0	0	0	0	0	0	0	0	0	0	0	9	6	10	5	0	0	0	0	0	0	0	0	5	5	3	1	0	0	0	1	5	11	0	1	4	34	0	0	0	0
+LFQ	235	0	0	0	0	0	0	0	0	0	0	0	0	4	10	13	7	0	0	0	0	0	0	0	0	5	1	4	0	0	0	2	1	5	7	0	0	4	37	0	0	0	0
+LFQ	236	0	0	0	0	0	0	0	0	0	0	0	0	7	8	15	6	0	0	0	0	0	0	0	0	7	3	5	1	0	0	0	1	6	8	0	1	1	31	0	0	0	0
+LFQ	237	0	0	0	0	0	0	0	0	0	0	0	0	2	9	13	6	0	0	0	0	0	0	0	0	6	4	7	1	0	0	0	1	3	12	0	1	1	34	0	0	0	0
+LFQ	238	0	0	0	0	0	0	0	0	0	0	0	0	2	10	16	6	0	0	0	0	0	0	0	0	9	2	3	0	0	0	0	0	5	9	0	2	3	33	0	0	0	0
+LFQ	239	0	0	0	0	0	0	0	0	0	0	0	0	4	5	17	9	0	0	0	0	0	0	0	0	7	3	1	0	0	0	1	1	2	15	0	1	3	31	0	0	0	0
+LFQ	240	0	0	0	0	0	0	0	0	0	0	0	0	0	10	19	6	0	0	0	0	0	0	0	0	6	4	4	0	0	1	3	0	2	13	0	1	1	30	0	0	0	0
+LFQ	241	0	0	0	0	0	0	0	0	0	0	0	0	1	4	23	9	0	0	0	0	0	0	0	0	7	5	8	1	0	0	2	1	1	8	0	1	3	26	0	0	0	0
+LFQ	242	0	0	0	0	0	0	0	0	0	0	0	0	3	10	19	10	0	0	0	0	0	0	0	0	2	5	4	1	0	0	0	1	2	10	0	0	2	31	0	0	0	0
+LFQ	243	0	0	0	0	0	0	0	0	0	0	0	0	2	2	17	14	0	0	0	0	0	0	0	0	6	5	5	0	0	0	0	0	6	13	0	2	3	25	0	0	0	0
+LFQ	244	0	0	0	0	0	0	0	0	0	0	0	0	1	3	18	11	0	0	0	0	0	0	0	0	6	5	5	1	0	0	1	0	2	12	0	5	1	29	0	0	0	0
+LFQ	245	0	0	0	0	0	0	0	0	0	0	0	0	1	8	14	11	0	0	0	0	0	0	0	0	8	5	3	1	0	0	1	0	1	15	1	1	3	27	0	0	0	0
+LFQ	246	0	0	0	0	0	0	0	0	0	0	0	0	4	6	15	12	0	0	0	0	0	0	0	0	5	2	8	1	0	1	1	0	1	13	0	2	1	28	0	0	0	0
+LFQ	247	0	0	0	0	0	0	0	0	0	0	0	0	8	3	16	14	0	0	0	0	0	0	0	0	10	4	6	0	0	0	0	0	2	15	1	2	2	17	0	0	0	0
+LFQ	248	0	0	0	0	0	0	0	0	0	0	0	0	5	6	21	8	0	0	0	0	0	0	0	0	7	8	6	2	0	0	0	1	1	14	0	2	2	17	0	0	0	0
+LFQ	249	0	0	0	0	0	0	0	0	0	0	0	0	5	6	20	8	0	0	0	0	0	0	0	0	5	7	10	0	1	0	0	0	1	15	0	2	0	20	0	0	0	0
+LFQ	250	0	0	0	0	0	0	0	0	0	0	0	0	2	10	15	10	0	0	0	0	0	0	0	0	9	5	8	1	0	0	0	2	6	10	0	0	2	20	0	0	0	0
+LFQ	251	0	0	0	0	0	0	0	0	0	0	0	0	7	20	21	17	0	0	0	0	0	0	0	0	7	7	6	0	0	0	0	1	2	4	0	0	0	8	0	0	0	0
+LFQ	252	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
+# Mismatches per cycle and quality. Use `grep ^MPC | cut -f 2-` to extract this part.
+# Columns correspond to qualities, rows to cycles. First column is the cycle number, second
+# is the number of N's and the rest is the number of mismatches
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+MPC	179	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	0
+MPC	180	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
+MPC	181	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
+MPC	182	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
+MPC	183	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
+MPC	184	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
+MPC	185	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
+MPC	186	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
+MPC	187	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
+MPC	188	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
+MPC	189	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
+MPC	190	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
+MPC	191	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
+MPC	192	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
+MPC	193	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
+MPC	194	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
+MPC	195	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
+MPC	196	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
+MPC	197	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
+MPC	198	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
+MPC	199	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
+MPC	200	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
+MPC	201	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
+MPC	202	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
+MPC	203	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
+MPC	204	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
+MPC	205	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
+MPC	206	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
+MPC	207	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
+MPC	208	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
+MPC	209	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
+MPC	210	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
+MPC	211	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
+MPC	212	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
+MPC	213	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
+MPC	214	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
+MPC	215	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
+MPC	216	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
+MPC	217	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
+MPC	218	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
+MPC	219	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
+MPC	220	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
+MPC	221	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
+MPC	222	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
+MPC	223	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
+MPC	224	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
+MPC	225	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
+MPC	226	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
+MPC	227	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
+MPC	228	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
+MPC	229	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
+MPC	230	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
+MPC	231	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
+MPC	232	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0
+MPC	233	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0
+MPC	234	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0
+MPC	235	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
+MPC	236	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0
+MPC	237	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0
+MPC	238	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
+MPC	239	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0
+MPC	240	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0
+MPC	241	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
+MPC	242	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0
+MPC	243	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
+MPC	244	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
+MPC	245	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
+MPC	246	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0
+MPC	247	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	0	0	0
+MPC	248	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	3	2	0	0	0	0	0	0	0	0	2	1	0	0	0	0	0	0	0	2	0	0	0	3	0	0	0
+MPC	249	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	1	1	0	0	0	0	0	0	0	0	2	0	5	0	0	0	0	0	0	2	0	0	0	0	0	0	0
+MPC	250	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	2	2	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	1	2	0	0	0	2	0	0	0
+MPC	251	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	2	2	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	2	0	0	0	0	3	0	0	0
+MPC	252	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
 # GC Content of first fragments. Use `grep ^GCF | cut -f 2-` to extract this part.
-GCF	14.82	0
-GCF	31.16	2
-GCF	33.42	6
-GCF	34.92	4
-GCF	36.18	6
-GCF	37.44	12
-GCF	38.94	28
-GCF	40.45	34
-GCF	41.96	37
-GCF	43.47	46
-GCF	44.72	55
-GCF	45.98	57
-GCF	47.49	68
-GCF	48.99	60
-GCF	50.50	27
-GCF	52.01	18
-GCF	53.52	15
-GCF	54.77	9
-GCF	56.03	4
-GCF	57.54	3
-GCF	59.05	2
-GCF	60.55	4
-GCF	62.06	0
-GCF	63.32	1
+GCF	21.86	0
+GCF	44.22	2
+GCF	44.97	8
+GCF	45.48	4
+GCF	45.98	3
+GCF	46.48	5
+GCF	46.98	2
+GCF	47.49	3
+GCF	47.99	12
+GCF	48.49	13
+GCF	48.99	9
+GCF	49.50	2
+GCF	50.25	3
+GCF	51.01	6
+GCF	51.51	4
+GCF	52.01	1
+GCF	52.51	0
+GCF	53.02	1
 # GC Content of last fragments. Use `grep ^GCL | cut -f 2-` to extract this part.
-GCL	14.07	0
-GCL	28.89	1
-GCL	30.40	3
-GCL	31.91	1
-GCL	33.42	2
-GCL	34.92	4
-GCL	36.18	8
-GCL	37.44	16
-GCL	38.94	31
-GCL	40.45	40
-GCL	41.96	39
-GCL	43.47	55
-GCL	44.72	46
-GCL	45.98	61
-GCL	47.49	53
-GCL	48.99	50
-GCL	50.50	32
-GCL	52.01	23
-GCL	53.52	11
-GCL	54.77	9
-GCL	56.03	8
-GCL	57.54	3
-GCL	61.06	1
+GCL	21.86	0
+GCL	44.22	2
+GCL	44.97	8
+GCL	45.48	4
+GCL	45.98	3
+GCL	46.48	5
+GCL	46.98	2
+GCL	47.49	3
+GCL	47.99	12
+GCL	48.49	13
+GCL	48.99	9
+GCL	49.50	2
+GCL	50.25	3
+GCL	51.01	6
+GCL	51.51	4
+GCL	52.01	1
+GCL	52.51	0
+GCL	53.02	1
 # ACGT content per cycle. Use `grep ^GCC | cut -f 2-` to extract this part. The columns are: cycle, and A,C,G,T counts [%]
-GCC	1	21.50	23.30	24.50	30.70
-GCC	2	21.10	22.20	22.50	34.20
-GCC	3	22.20	20.50	26.80	30.50
-GCC	4	24.40	21.50	21.50	32.60
-GCC	5	23.50	21.10	25.60	29.80
-GCC	6	26.30	21.80	20.40	31.50
-GCC	7	25.40	20.50	22.00	32.10
-GCC	8	23.90	19.20	27.00	29.90
-GCC	9	23.70	22.70	22.00	31.60
-GCC	10	22.50	22.00	24.10	31.40
-GCC	11	22.40	21.50	22.10	34.00
-GCC	12	25.20	18.00	24.50	32.30
-GCC	13	23.70	20.80	21.70	33.80
-GCC	14	24.60	23.00	22.40	30.00
-GCC	15	25.50	22.30	22.50	29.70
-GCC	16	24.10	21.40	23.60	30.90
-GCC	17	24.30	21.00	23.90	30.80
-GCC	18	24.40	22.10	22.70	30.80
-GCC	19	25.60	20.50	24.70	29.20
-GCC	20	25.80	19.60	22.00	32.60
-GCC	21	23.20	22.90	23.00	30.90
-GCC	22	23.90	22.70	22.60	30.80
-GCC	23	25.80	21.30	22.40	30.50
-GCC	24	23.50	22.00	22.70	31.80
-GCC	25	22.40	21.80	23.10	32.70
-GCC	26	22.90	19.90	24.30	32.90
-GCC	27	23.10	22.10	24.20	30.60
-GCC	28	23.50	22.10	22.90	31.50
-GCC	29	24.40	21.80	21.30	32.50
-GCC	30	21.90	22.50	22.60	33.00
-GCC	31	23.10	20.90	24.20	31.80
-GCC	32	24.60	22.10	23.60	29.70
-GCC	33	22.80	21.10	22.00	34.10
-GCC	34	21.70	22.10	23.60	32.60
-GCC	35	24.30	23.20	20.60	31.90
-GCC	36	21.60	22.70	24.50	31.20
-GCC	37	22.20	23.50	22.20	32.10
-GCC	38	24.10	20.80	22.00	33.10
-GCC	39	22.20	21.10	26.80	29.90
-GCC	40	21.80	24.00	22.90	31.30
-GCC	41	25.10	22.90	23.10	28.90
-GCC	42	25.50	22.70	22.20	29.60
-GCC	43	22.60	23.00	24.10	30.30
-GCC	44	21.70	21.60	24.20	32.50
-GCC	45	21.80	22.70	21.20	34.30
-GCC	46	22.80	22.00	23.80	31.40
-GCC	47	23.70	22.30	23.90	30.10
-GCC	48	24.30	21.70	24.80	29.20
-GCC	49	23.90	22.00	22.90	31.20
-GCC	50	23.50	22.40	22.80	31.30
-GCC	51	23.30	20.40	24.70	31.60
-GCC	52	23.30	20.20	25.10	31.40
-GCC	53	23.70	22.00	22.30	32.00
-GCC	54	23.30	21.30	25.40	30.00
-GCC	55	25.30	21.40	22.60	30.70
-GCC	56	24.40	24.10	19.20	32.30
-GCC	57	22.00	21.50	24.50	32.00
-GCC	58	24.90	21.20	24.20	29.70
-GCC	59	24.10	21.70	24.50	29.70
-GCC	60	24.80	20.90	25.10	29.20
-GCC	61	21.30	21.60	28.10	29.00
-GCC	62	23.80	21.80	21.70	32.70
-GCC	63	23.30	22.80	23.50	30.40
-GCC	64	24.00	21.40	23.50	31.10
-GCC	65	24.40	22.80	22.50	30.30
-GCC	66	24.70	22.30	21.40	31.60
-GCC	67	22.40	21.10	24.60	31.90
-GCC	68	24.60	22.90	20.60	31.90
-GCC	69	22.40	23.00	23.10	31.50
-GCC	70	23.50	19.50	23.90	33.10
-# Insert sizes. Use `grep ^IS | cut -f 2-` to extract this part. The columns are: pairs total, inward oriented pairs, outward oriented pairs, other pairs
-IS	0	0	0	0	0
-IS	1	0	0	0	0
-IS	2	0	0	0	0
-IS	3	0	0	0	0
-IS	4	0	0	0	0
-IS	5	0	0	0	0
-IS	6	0	0	0	0
-IS	7	0	0	0	0
-IS	8	0	0	0	0
-IS	9	0	0	0	0
-IS	10	0	0	0	0
-IS	11	0	0	0	0
-IS	12	0	0	0	0
-IS	13	0	0	0	0
-IS	14	0	0	0	0
-IS	15	0	0	0	0
-IS	16	0	0	0	0
-IS	17	0	0	0	0
-IS	18	0	0	0	0
-IS	19	0	0	0	0
-IS	20	0	0	0	0
-IS	21	0	0	0	0
-IS	22	0	0	0	0
-IS	23	0	0	0	0
-IS	24	0	0	0	0
-IS	25	0	0	0	0
-IS	26	0	0	0	0
-IS	27	0	0	0	0
-IS	28	0	0	0	0
-IS	29	0	0	0	0
-IS	30	0	0	0	0
-IS	31	0	0	0	0
-IS	32	0	0	0	0
-IS	33	0	0	0	0
-IS	34	0	0	0	0
-IS	35	0	0	0	0
-IS	36	0	0	0	0
-IS	37	0	0	0	0
-IS	38	0	0	0	0
-IS	39	0	0	0	0
-IS	40	0	0	0	0
-IS	41	0	0	0	0
-IS	42	0	0	0	0
-IS	43	0	0	0	0
-IS	44	0	0	0	0
-IS	45	0	0	0	0
-IS	46	0	0	0	0
-IS	47	0	0	0	0
-IS	48	0	0	0	0
-IS	49	0	0	0	0
-IS	50	0	0	0	0
-IS	51	0	0	0	0
-IS	52	0	0	0	0
-IS	53	0	0	0	0
-IS	54	0	0	0	0
-IS	55	0	0	0	0
-IS	56	0	0	0	0
-IS	57	0	0	0	0
-IS	58	0	0	0	0
-IS	59	0	0	0	0
-IS	60	0	0	0	0
-IS	61	0	0	0	0
-IS	62	0	0	0	0
-IS	63	0	0	0	0
-IS	64	0	0	0	0
-IS	65	0	0	0	0
-IS	66	0	0	0	0
-IS	67	0	0	0	0
-IS	68	0	0	0	0
-IS	69	0	0	0	0
-IS	70	0	0	0	0
-IS	71	0	0	0	0
-IS	72	0	0	0	0
-IS	73	0	0	0	0
-IS	74	0	0	0	0
-IS	75	0	0	0	0
-IS	76	0	0	0	0
-IS	77	0	0	0	0
-IS	78	0	0	0	0
-IS	79	0	0	0	0
-IS	80	0	0	0	0
-IS	81	0	0	0	0
-IS	82	0	0	0	0
-IS	83	0	0	0	0
-IS	84	0	0	0	0
-IS	85	0	0	0	0
-IS	86	0	0	0	0
-IS	87	0	0	0	0
-IS	88	0	0	0	0
-IS	89	0	0	0	0
-IS	90	0	0	0	0
-IS	91	0	0	0	0
-IS	92	0	0	0	0
-IS	93	0	0	0	0
-IS	94	0	0	0	0
-IS	95	0	0	0	0
-IS	96	0	0	0	0
-IS	97	0	0	0	0
-IS	98	0	0	0	0
-IS	99	0	0	0	0
-IS	100	0	0	0	0
-IS	101	0	0	0	0
-IS	102	0	0	0	0
-IS	103	0	0	0	0
-IS	104	0	0	0	0
-IS	105	0	0	0	0
-IS	106	0	0	0	0
-IS	107	0	0	0	0
-IS	108	0	0	0	0
-IS	109	0	0	0	0
-IS	110	0	0	0	0
-IS	111	0	0	0	0
-IS	112	0	0	0	0
-IS	113	0	0	0	0
-IS	114	0	0	0	0
-IS	115	0	0	0	0
-IS	116	0	0	0	0
-IS	117	0	0	0	0
-IS	118	0	0	0	0
-IS	119	0	0	0	0
-IS	120	0	0	0	0
-IS	121	0	0	0	0
-IS	122	0	0	0	0
-IS	123	0	0	0	0
-IS	124	0	0	0	0
-IS	125	0	0	0	0
-IS	126	0	0	0	0
-IS	127	0	0	0	0
-IS	128	0	0	0	0
-IS	129	0	0	0	0
-IS	130	0	0	0	0
-IS	131	0	0	0	0
-IS	132	0	0	0	0
-IS	133	0	0	0	0
-IS	134	0	0	0	0
-IS	135	0	0	0	0
-IS	136	0	0	0	0
-IS	137	0	0	0	0
-IS	138	0	0	0	0
-IS	139	0	0	0	0
-IS	140	0	0	0	0
-IS	141	0	0	0	0
-IS	142	0	0	0	0
-IS	143	0	0	0	0
-IS	144	0	0	0	0
-IS	145	0	0	0	0
-IS	146	0	0	0	0
-IS	147	0	0	0	0
-IS	148	0	0	0	0
-IS	149	0	0	0	0
-IS	150	0	0	0	0
-IS	151	0	0	0	0
-IS	152	0	0	0	0
-IS	153	0	0	0	0
-IS	154	0	0	0	0
-IS	155	0	0	0	0
-IS	156	0	0	0	0
-IS	157	0	0	0	0
-IS	158	0	0	0	0
-IS	159	0	0	0	0
-IS	160	0	0	0	0
-IS	161	0	0	0	0
-IS	162	0	0	0	0
-IS	163	0	0	0	0
-IS	164	0	0	0	0
-IS	165	0	0	0	0
-IS	166	0	0	0	0
-IS	167	0	0	0	0
-IS	168	0	0	0	0
-IS	169	0	0	0	0
-IS	170	0	0	0	0
-IS	171	0	0	0	0
-IS	172	0	0	0	0
-IS	173	0	0	0	0
-IS	174	0	0	0	0
-IS	175	0	0	0	0
-IS	176	0	0	0	0
-IS	177	0	0	0	0
-IS	178	0	0	0	0
-IS	179	0	0	0	0
-IS	180	0	0	0	0
-IS	181	0	0	0	0
-IS	182	0	0	0	0
-IS	183	0	0	0	0
-IS	184	0	0	0	0
-IS	185	0	0	0	0
-IS	186	0	0	0	0
-IS	187	0	0	0	0
-IS	188	0	0	0	0
-IS	189	0	0	0	0
-IS	190	0	0	0	0
-IS	191	0	0	0	0
-IS	192	0	0	0	0
-IS	193	0	0	0	0
-IS	194	0	0	0	0
-IS	195	0	0	0	0
-IS	196	0	0	0	0
-IS	197	0	0	0	0
-IS	198	0	0	0	0
-IS	199	0	0	0	0
-IS	200	0	0	0	0
-IS	201	0	0	0	0
-IS	202	0	0	0	0
-IS	203	0	0	0	0
-IS	204	0	0	0	0
-IS	205	0	0	0	0
-IS	206	0	0	0	0
-IS	207	0	0	0	0
-IS	208	0	0	0	0
-IS	209	0	0	0	0
-IS	210	0	0	0	0
-IS	211	0	0	0	0
-IS	212	0	0	0	0
-IS	213	0	0	0	0
-IS	214	0	0	0	0
-IS	215	0	0	0	0
-IS	216	0	0	0	0
-IS	217	0	0	0	0
-IS	218	0	0	0	0
-IS	219	0	0	0	0
-IS	220	0	0	0	0
-IS	221	0	0	0	0
-IS	222	0	0	0	0
-IS	223	0	0	0	0
-IS	224	0	0	0	0
-IS	225	0	0	0	0
-IS	226	0	0	0	0
-IS	227	0	0	0	0
-IS	228	0	0	0	0
-IS	229	0	0	0	0
-IS	230	0	0	0	0
-IS	231	0	0	0	0
-IS	232	0	0	0	0
-IS	233	0	0	0	0
-IS	234	0	0	0	0
-IS	235	0	0	0	0
-IS	236	0	0	0	0
-IS	237	0	0	0	0
-IS	238	0	0	0	0
-IS	239	0	0	0	0
-IS	240	0	0	0	0
-IS	241	0	0	0	0
-IS	242	0	0	0	0
-IS	243	0	0	0	0
-IS	244	0	0	0	0
-IS	245	0	0	0	0
-IS	246	0	0	0	0
-IS	247	0	0	0	0
-IS	248	0	0	0	0
-IS	249	0	0	0	0
-IS	250	0	0	0	0
-IS	251	0	0	0	0
-IS	252	0	0	0	0
-IS	253	0	0	0	0
-IS	254	0	0	0	0
-IS	255	0	0	0	0
-IS	256	0	0	0	0
-IS	257	0	0	0	0
-IS	258	0	0	0	0
-IS	259	0	0	0	0
-IS	260	0	0	0	0
-IS	261	0	0	0	0
-IS	262	0	0	0	0
-IS	263	0	0	0	0
-IS	264	0	0	0	0
-IS	265	0	0	0	0
-IS	266	0	0	0	0
-IS	267	0	0	0	0
-IS	268	0	0	0	0
-IS	269	0	0	0	0
-IS	270	0	0	0	0
-IS	271	0	0	0	0
-IS	272	0	0	0	0
-IS	273	0	0	0	0
-IS	274	0	0	0	0
-IS	275	0	0	0	0
-IS	276	0	0	0	0
-IS	277	0	0	0	0
-IS	278	0	0	0	0
-IS	279	0	0	0	0
-IS	280	0	0	0	0
-IS	281	0	0	0	0
-IS	282	0	0	0	0
-IS	283	0	0	0	0
-IS	284	0	0	0	0
-IS	285	0	0	0	0
-IS	286	0	0	0	0
-IS	287	0	0	0	0
-IS	288	0	0	0	0
-IS	289	0	0	0	0
-IS	290	0	0	0	0
-IS	291	0	0	0	0
-IS	292	0	0	0	0
-IS	293	0	0	0	0
-IS	294	0	0	0	0
-IS	295	0	0	0	0
-IS	296	0	0	0	0
-IS	297	0	0	0	0
-IS	298	0	0	0	0
-IS	299	0	0	0	0
-IS	300	0	0	0	0
-IS	301	0	0	0	0
-IS	302	0	0	0	0
-IS	303	0	0	0	0
-IS	304	0	0	0	0
-IS	305	0	0	0	0
-IS	306	0	0	0	0
-IS	307	0	0	0	0
-IS	308	0	0	0	0
-IS	309	0	0	0	0
-IS	310	0	0	0	0
-IS	311	1	1	0	0
-IS	312	0	0	0	0
-IS	313	0	0	0	0
-IS	314	0	0	0	0
-IS	315	0	0	0	0
-IS	316	0	0	0	0
-IS	317	0	0	0	0
-IS	318	0	0	0	0
-IS	319	0	0	0	0
-IS	320	0	0	0	0
-IS	321	0	0	0	0
-IS	322	0	0	0	0
-IS	323	0	0	0	0
-IS	324	0	0	0	0
-IS	325	0	0	0	0
-IS	326	0	0	0	0
-IS	327	0	0	0	0
-IS	328	0	0	0	0
-IS	329	0	0	0	0
-IS	330	0	0	0	0
-IS	331	0	0	0	0
-IS	332	0	0	0	0
-IS	333	0	0	0	0
-IS	334	0	0	0	0
-IS	335	0	0	0	0
-IS	336	0	0	0	0
-IS	337	0	0	0	0
-IS	338	0	0	0	0
-IS	339	0	0	0	0
-IS	340	0	0	0	0
-IS	341	0	0	0	0
-IS	342	0	0	0	0
-IS	343	0	0	0	0
-IS	344	0	0	0	0
-IS	345	1	1	0	0
-IS	346	0	0	0	0
-IS	347	1	1	0	0
-IS	348	0	0	0	0
-IS	349	0	0	0	0
-IS	350	0	0	0	0
-IS	351	0	0	0	0
-IS	352	0	0	0	0
-IS	353	0	0	0	0
-IS	354	0	0	0	0
-IS	355	0	0	0	0
-IS	356	0	0	0	0
-IS	357	0	0	0	0
-IS	358	0	0	0	0
-IS	359	0	0	0	0
-IS	360	0	0	0	0
-IS	361	0	0	0	0
-IS	362	0	0	0	0
-IS	363	0	0	0	0
-IS	364	1	1	0	0
-IS	365	0	0	0	0
-IS	366	0	0	0	0
-IS	367	0	0	0	0
-IS	368	0	0	0	0
-IS	369	0	0	0	0
-IS	370	1	1	0	0
-IS	371	1	1	0	0
-IS	372	0	0	0	0
-IS	373	0	0	0	0
-IS	374	0	0	0	0
-IS	375	0	0	0	0
-IS	376	0	0	0	0
-IS	377	0	0	0	0
-IS	378	2	2	0	0
-IS	379	0	0	0	0
-IS	380	0	0	0	0
-IS	381	0	0	0	0
-IS	382	0	0	0	0
-IS	383	0	0	0	0
-IS	384	0	0	0	0
-IS	385	0	0	0	0
-IS	386	0	0	0	0
-IS	387	1	1	0	0
-IS	388	1	1	0	0
-IS	389	0	0	0	0
-IS	390	1	1	0	0
-IS	391	0	0	0	0
-IS	392	0	0	0	0
-IS	393	0	0	0	0
-IS	394	1	1	0	0
-IS	395	1	1	0	0
-IS	396	1	1	0	0
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-IS	398	1	1	0	0
-IS	399	0	0	0	0
-IS	400	1	1	0	0
-IS	401	0	0	0	0
-IS	402	0	0	0	0
-IS	403	1	1	0	0
-IS	404	0	0	0	0
-IS	405	0	0	0	0
-IS	406	0	0	0	0
-IS	407	1	1	0	0
-IS	408	1	1	0	0
-IS	409	3	3	0	0
-IS	410	4	4	0	0
-IS	411	0	0	0	0
-IS	412	0	0	0	0
-IS	413	1	1	0	0
-IS	414	1	1	0	0
-IS	415	1	1	0	0
-IS	416	1	1	0	0
-IS	417	0	0	0	0
-IS	418	1	1	0	0
-IS	419	0	0	0	0
-IS	420	1	1	0	0
-IS	421	1	1	0	0
-IS	422	0	0	0	0
-IS	423	0	0	0	0
-IS	424	3	3	0	0
-IS	425	3	3	0	0
-IS	426	0	0	0	0
-IS	427	1	1	0	0
-IS	428	1	1	0	0
-IS	429	0	0	0	0
-IS	430	0	0	0	0
-IS	431	4	4	0	0
-IS	432	1	1	0	0
-IS	433	1	1	0	0
-IS	434	3	3	0	0
-IS	435	1	1	0	0
-IS	436	1	1	0	0
-IS	437	0	0	0	0
-IS	438	1	1	0	0
-IS	439	0	0	0	0
-IS	440	3	3	0	0
-IS	441	1	1	0	0
-IS	442	4	4	0	0
-IS	443	3	3	0	0
-IS	444	1	1	0	0
-IS	445	4	4	0	0
-IS	446	1	1	0	0
-IS	447	1	1	0	0
-IS	448	1	1	0	0
-IS	449	2	2	0	0
-IS	450	3	3	0	0
-IS	451	5	5	0	0
-IS	452	2	2	0	0
-IS	453	3	3	0	0
-IS	454	4	4	0	0
-IS	455	7	7	0	0
-IS	456	3	3	0	0
-IS	457	4	4	0	0
-IS	458	2	2	0	0
-IS	459	3	3	0	0
-IS	460	2	2	0	0
-IS	461	2	2	0	0
-IS	462	2	2	0	0
-IS	463	2	2	0	0
-IS	464	1	1	0	0
-IS	465	6	6	0	0
-IS	466	4	4	0	0
-IS	467	6	6	0	0
-IS	468	1	1	0	0
-IS	469	1	1	0	0
-IS	470	1	1	0	0
-IS	471	3	3	0	0
-IS	472	8	8	0	0
-IS	473	4	4	0	0
-IS	474	2	2	0	0
-IS	475	2	2	0	0
-IS	476	4	4	0	0
-IS	477	6	6	0	0
-IS	478	3	3	0	0
-IS	479	6	6	0	0
-IS	480	7	7	0	0
-IS	481	3	3	0	0
-IS	482	2	2	0	0
-IS	483	1	1	0	0
-IS	484	6	6	0	0
-IS	485	6	6	0	0
-IS	486	6	6	0	0
-IS	487	2	2	0	0
-IS	488	4	4	0	0
-IS	489	3	3	0	0
-IS	490	6	6	0	0
-IS	491	3	3	0	0
-IS	492	5	5	0	0
-IS	493	2	2	0	0
-IS	494	4	4	0	0
-IS	495	0	0	0	0
-IS	496	7	7	0	0
-IS	497	5	5	0	0
-IS	498	4	4	0	0
-IS	499	6	6	0	0
-IS	500	0	0	0	0
-IS	501	2	2	0	0
-IS	502	2	2	0	0
-IS	503	4	4	0	0
-IS	504	3	3	0	0
-IS	505	3	3	0	0
-IS	506	2	2	0	0
-IS	507	4	4	0	0
-IS	508	3	3	0	0
-IS	509	1	1	0	0
-IS	510	7	7	0	0
-IS	511	2	2	0	0
-IS	512	3	3	0	0
-IS	513	7	7	0	0
-IS	514	4	4	0	0
-IS	515	2	2	0	0
-IS	516	2	2	0	0
-IS	517	1	1	0	0
-IS	518	0	0	0	0
-IS	519	2	2	0	0
-IS	520	2	2	0	0
-IS	521	5	5	0	0
-IS	522	6	6	0	0
-IS	523	4	4	0	0
-IS	524	2	2	0	0
-IS	525	1	1	0	0
-IS	526	5	5	0	0
-IS	527	6	6	0	0
-IS	528	0	0	0	0
-IS	529	5	5	0	0
-IS	530	7	7	0	0
-IS	531	4	4	0	0
-IS	532	5	5	0	0
-IS	533	1	1	0	0
-IS	534	5	5	0	0
-IS	535	3	3	0	0
-IS	536	2	2	0	0
-IS	537	3	3	0	0
-IS	538	2	2	0	0
-IS	539	4	4	0	0
-IS	540	2	2	0	0
-IS	541	2	2	0	0
-IS	542	3	3	0	0
-IS	543	4	4	0	0
-IS	544	2	2	0	0
-IS	545	1	1	0	0
-IS	546	2	2	0	0
-IS	547	2	2	0	0
-IS	548	3	3	0	0
-IS	549	5	5	0	0
-IS	550	1	1	0	0
-IS	551	0	0	0	0
-IS	552	0	0	0	0
-IS	553	4	4	0	0
-IS	554	1	1	0	0
-IS	555	5	5	0	0
-IS	556	5	5	0	0
-IS	557	2	2	0	0
-IS	558	2	2	0	0
-IS	559	3	3	0	0
-IS	560	1	1	0	0
-IS	561	1	1	0	0
-IS	562	4	4	0	0
-IS	563	1	1	0	0
-IS	564	1	1	0	0
-IS	565	0	0	0	0
-IS	566	1	1	0	0
-IS	567	1	1	0	0
-IS	568	0	0	0	0
-IS	569	2	2	0	0
-IS	570	1	1	0	0
-IS	571	2	2	0	0
-IS	572	4	4	0	0
-IS	573	0	0	0	0
-IS	574	0	0	0	0
-IS	575	0	0	0	0
-IS	576	1	1	0	0
-IS	577	2	2	0	0
-IS	578	1	1	0	0
-IS	579	2	2	0	0
-IS	580	0	0	0	0
-IS	581	1	1	0	0
-IS	582	0	0	0	0
-IS	583	1	1	0	0
-IS	584	2	2	0	0
-IS	585	0	0	0	0
-IS	586	3	3	0	0
-IS	587	0	0	0	0
-IS	588	0	0	0	0
-IS	589	0	0	0	0
-IS	590	0	0	0	0
-IS	591	0	0	0	0
-IS	592	0	0	0	0
-IS	593	0	0	0	0
-IS	594	2	2	0	0
-IS	595	0	0	0	0
-IS	596	0	0	0	0
-IS	597	1	1	0	0
-IS	598	0	0	0	0
-IS	599	0	0	0	0
-IS	600	1	1	0	0
-IS	601	1	1	0	0
-IS	602	0	0	0	0
-IS	603	0	0	0	0
-IS	604	0	0	0	0
-IS	605	1	1	0	0
-IS	606	0	0	0	0
-IS	607	1	1	0	0
-IS	608	0	0	0	0
-IS	609	0	0	0	0
-IS	610	0	0	0	0
-IS	611	1	1	0	0
+GCC	1	21.50	29.50	33.50	15.50
+GCC	2	30.00	16.00	11.00	43.00
+GCC	3	33.00	25.00	9.00	33.00
+GCC	4	17.00	29.00	13.00	41.00
+GCC	5	37.00	22.00	12.00	29.00
+GCC	6	36.00	26.00	17.00	21.00
+GCC	7	29.50	13.50	31.50	25.50
+GCC	8	50.50	14.50	19.50	15.50
+GCC	9	17.00	33.00	18.00	32.00
+GCC	10	37.00	14.00	21.00	28.00
+GCC	11	20.50	14.50	29.50	35.50
+GCC	12	30.00	24.00	22.00	24.00
+GCC	13	27.00	15.00	21.00	37.00
+GCC	14	24.00	22.00	26.00	28.00
+GCC	15	25.50	20.50	24.50	29.50
+GCC	16	31.00	15.00	20.00	34.00
+GCC	17	28.00	25.00	14.00	33.00
+GCC	18	30.50	28.50	19.50	21.50
+GCC	19	29.00	26.00	21.00	24.00
+GCC	20	22.50	23.50	17.50	36.50
+GCC	21	35.50	17.50	19.50	27.50
+GCC	22	37.50	28.50	15.50	18.50
+GCC	23	31.00	19.00	13.00	37.00
+GCC	24	37.00	12.00	22.00	29.00
+GCC	25	35.50	22.50	17.50	24.50
+GCC	26	33.50	18.50	15.50	32.50
+GCC	27	34.50	14.50	25.50	25.50
+GCC	28	31.00	14.00	24.00	31.00
+GCC	29	30.00	27.00	24.00	19.00
+GCC	30	31.00	20.00	14.00	35.00
+GCC	31	33.50	29.50	13.50	23.50
+GCC	32	42.50	20.50	19.50	17.50
+GCC	33	25.50	23.50	14.50	36.50
+GCC	34	39.50	16.50	20.50	23.50
+GCC	35	32.50	23.50	21.50	22.50
+GCC	36	42.00	25.00	16.00	17.00
+GCC	37	38.00	17.00	19.00	26.00
+GCC	38	24.00	26.00	25.00	25.00
+GCC	39	22.50	41.50	18.50	17.50
+GCC	40	32.00	16.00	21.00	31.00
+GCC	41	33.00	28.00	19.00	20.00
+GCC	42	30.50	25.50	19.50	24.50
+GCC	43	35.00	29.00	15.00	21.00
+GCC	44	20.00	27.00	22.00	31.00
+GCC	45	40.50	21.50	21.50	16.50
+GCC	46	26.50	20.50	22.50	30.50
+GCC	47	38.50	29.50	16.50	15.50
+GCC	48	27.50	24.50	17.50	30.50
+GCC	49	28.50	32.50	10.50	28.50
+GCC	50	46.50	20.50	9.50	23.50
+GCC	51	34.50	28.50	13.50	23.50
+GCC	52	41.50	23.50	20.50	14.50
+GCC	53	20.00	28.00	26.00	26.00
+GCC	54	31.50	18.50	24.50	25.50
+GCC	55	30.50	22.50	16.50	30.50
+GCC	56	33.50	22.50	13.50	30.50
+GCC	57	23.00	24.00	23.00	30.00
+GCC	58	25.00	37.00	19.00	19.00
+GCC	59	34.00	23.00	24.00	19.00
+GCC	60	29.00	28.00	17.00	26.00
+GCC	61	25.50	23.50	24.50	26.50
+GCC	62	31.50	22.50	16.50	29.50
+GCC	63	27.50	28.50	25.50	18.50
+GCC	64	33.50	21.50	25.50	19.50
+GCC	65	35.50	19.50	18.50	26.50
+GCC	66	34.00	25.00	15.00	26.00
+GCC	67	37.00	23.00	19.00	21.00
+GCC	68	36.50	29.50	13.50	20.50
+GCC	69	38.50	19.50	20.50	21.50
+GCC	70	38.50	16.50	18.50	26.50
+GCC	71	25.50	38.50	21.50	14.50
+GCC	72	29.00	29.00	25.00	17.00
+GCC	73	32.50	20.50	21.50	25.50
+GCC	74	28.50	32.50	12.50	26.50
+GCC	75	41.50	12.50	18.50	27.50
+GCC	76	24.50	29.50	23.50	22.50
+GCC	77	36.00	21.00	18.00	25.00
+GCC	78	27.00	34.00	22.00	17.00
+GCC	79	21.50	26.50	25.50	26.50
+GCC	80	34.00	19.00	28.00	19.00
+GCC	81	17.00	26.00	26.00	31.00
+GCC	82	31.00	30.00	23.00	16.00
+GCC	83	31.50	26.50	12.50	29.50
+GCC	84	19.00	41.00	21.00	19.00
+GCC	85	37.50	24.50	16.50	21.50
+GCC	86	15.00	48.00	15.00	22.00
+GCC	87	41.00	16.00	18.00	25.00
+GCC	88	23.50	27.50	27.50	21.50
+GCC	89	26.50	27.50	26.50	19.50
+GCC	90	18.50	23.50	24.50	33.50
+GCC	91	27.00	32.00	22.00	19.00
+GCC	92	23.50	17.50	27.50	31.50
+GCC	93	25.50	37.50	15.50	21.50
+GCC	94	27.00	17.00	24.00	32.00
+GCC	95	26.50	37.50	14.50	21.50
+GCC	96	29.50	25.50	16.50	28.50
+GCC	97	29.00	31.00	21.00	19.00
+GCC	98	18.00	33.00	22.00	27.00
+GCC	99	24.50	33.50	24.50	17.50
+GCC	100	24.50	16.50	24.50	34.50
+GCC	101	25.00	40.00	19.00	16.00
+GCC	102	17.50	17.50	32.50	32.50
+GCC	103	31.00	26.00	16.00	27.00
+GCC	104	26.50	29.50	20.50	23.50
+GCC	105	34.00	33.00	21.00	12.00
+GCC	106	23.00	31.00	26.00	20.00
+GCC	107	17.50	35.50	23.50	23.50
+GCC	108	24.50	30.50	23.50	21.50
+GCC	109	17.00	31.00	22.00	30.00
+GCC	110	16.00	35.00	24.00	25.00
+GCC	111	24.00	32.00	23.00	21.00
+GCC	112	37.00	28.00	16.00	19.00
+GCC	113	19.50	22.50	32.50	25.50
+GCC	114	17.00	31.00	35.00	17.00
+GCC	115	29.50	24.50	23.50	22.50
+GCC	116	22.00	30.00	34.00	14.00
+GCC	117	27.00	23.00	19.00	31.00
+GCC	118	25.50	14.50	34.50	25.50
+GCC	119	22.50	34.50	20.50	22.50
+GCC	120	17.50	24.50	26.50	31.50
+GCC	121	27.50	33.50	22.50	16.50
+GCC	122	17.00	23.00	25.00	35.00
+GCC	123	23.50	46.50	11.50	18.50
+GCC	124	9.00	32.00	34.00	25.00
+GCC	125	24.00	27.00	19.00	30.00
+GCC	126	26.00	17.00	28.00	29.00
+GCC	127	26.50	16.50	21.50	35.50
+GCC	128	18.00	34.00	31.00	17.00
+GCC	129	25.50	25.50	27.50	21.50
+GCC	130	25.00	20.00	22.00	33.00
+GCC	131	17.50	39.50	24.50	18.50
+GCC	132	21.00	28.00	23.00	28.00
+GCC	133	13.50	31.50	35.50	19.50
+GCC	134	24.50	19.50	30.50	25.50
+GCC	135	16.50	23.50	30.50	29.50
+GCC	136	28.00	32.00	15.00	25.00
+GCC	137	22.50	21.50	30.50	25.50
+GCC	138	14.50	34.50	24.50	26.50
+GCC	139	20.50	29.50	24.50	25.50
+GCC	140	17.00	23.00	30.00	30.00
+GCC	141	20.50	23.50	25.50	30.50
+GCC	142	18.00	29.00	38.00	15.00
+GCC	143	22.00	24.00	27.00	27.00
+GCC	144	21.50	30.50	26.50	21.50
+GCC	145	22.00	21.00	29.00	28.00
+GCC	146	25.00	16.00	39.00	20.00
+GCC	147	26.50	22.50	30.50	20.50
+GCC	148	12.50	28.50	36.50	22.50
+GCC	149	26.50	23.50	23.50	26.50
+GCC	150	14.00	29.00	24.00	33.00
+GCC	151	19.50	30.50	32.50	17.50
+GCC	152	18.50	17.50	29.50	34.50
+GCC	153	22.50	22.50	31.50	23.50
+GCC	154	22.00	21.00	29.00	28.00
+GCC	155	21.00	26.00	19.00	34.00
+GCC	156	14.50	23.50	35.50	26.50
+GCC	157	22.00	31.00	23.00	24.00
+GCC	158	22.50	29.50	24.50	23.50
+GCC	159	17.50	12.50	46.50	23.50
+GCC	160	24.50	26.50	26.50	22.50
+GCC	161	13.00	23.00	45.00	19.00
+GCC	162	31.50	16.50	22.50	29.50
+GCC	163	19.50	21.50	35.50	23.50
+GCC	164	29.00	18.00	21.00	32.00
+GCC	165	14.50	17.50	35.50	32.50
+GCC	166	17.50	37.50	28.50	16.50
+GCC	167	16.50	21.50	31.50	30.50
+GCC	168	14.00	25.00	30.00	31.00
+GCC	169	18.50	20.50	23.50	37.50
+GCC	170	19.00	23.00	28.00	30.00
+GCC	171	20.00	28.00	33.00	19.00
+GCC	172	19.00	20.00	32.00	29.00
+GCC	173	24.50	16.50	33.50	25.50
+GCC	174	17.50	23.50	33.50	25.50
+GCC	175	33.50	17.50	35.50	13.50
+GCC	176	16.50	32.50	28.50	22.50
+GCC	177	19.00	22.00	27.00	32.00
+GCC	178	16.00	26.00	30.00	28.00
+GCC	179	18.00	18.00	22.00	42.00
+GCC	180	21.00	22.00	34.00	23.00
+GCC	181	20.50	19.50	35.50	24.50
+GCC	182	32.50	18.50	22.50	26.50
+GCC	183	24.50	13.50	28.50	33.50
+GCC	184	15.00	29.00	30.00	26.00
+GCC	185	15.00	32.00	33.00	20.00
+GCC	186	22.50	23.50	34.50	19.50
+GCC	187	19.00	14.00	40.00	27.00
+GCC	188	27.50	21.50	27.50	23.50
+GCC	189	17.00	22.00	34.00	27.00
+GCC	190	23.00	30.00	23.00	24.00
+GCC	191	25.00	22.00	28.00	25.00
+GCC	192	34.50	24.50	13.50	27.50
+GCC	193	18.50	25.50	25.50	30.50
+GCC	194	18.50	33.50	24.50	23.50
+GCC	195	16.00	26.00	23.00	35.00
+GCC	196	21.50	25.50	24.50	28.50
+GCC	197	20.00	21.00	23.00	36.00
+GCC	198	17.00	21.00	37.00	25.00
+GCC	199	20.50	18.50	25.50	35.50
+GCC	200	21.00	29.00	21.00	29.00
+GCC	201	27.00	21.00	23.00	29.00
+GCC	202	21.50	24.50	19.50	34.50
+GCC	203	21.50	24.50	26.50	27.50
+GCC	204	27.00	29.00	24.00	20.00
+GCC	205	19.50	21.50	22.50	36.50
+GCC	206	26.50	24.50	21.50	27.50
+GCC	207	22.50	21.50	19.50	36.50
+GCC	208	14.00	35.00	29.00	22.00
+GCC	209	16.00	23.00	12.00	49.00
+GCC	210	18.50	19.50	40.50	21.50
+GCC	211	26.00	20.00	22.00	32.00
+GCC	212	21.00	31.00	18.00	30.00
+GCC	213	24.00	15.00	31.00	30.00
+GCC	214	17.50	24.50	25.50	32.50
+GCC	215	26.00	24.00	23.00	27.00
+GCC	216	21.50	17.50	25.50	35.50
+GCC	217	26.00	29.00	17.00	28.00
+GCC	218	20.00	27.00	21.00	32.00
+GCC	219	17.00	21.00	21.00	41.00
+GCC	220	25.50	23.50	23.50	27.50
+GCC	221	21.50	23.50	20.50	34.50
+GCC	222	21.50	21.50	18.50	38.50
+GCC	223	20.00	27.00	28.00	25.00
+GCC	224	22.50	22.50	24.50	30.50
+GCC	225	14.50	35.50	30.50	19.50
+GCC	226	20.00	23.00	26.00	31.00
+GCC	227	20.50	24.50	23.50	31.50
+GCC	228	33.00	19.00	26.00	22.00
+GCC	229	22.50	24.50	18.50	34.50
+GCC	230	21.00	32.00	16.00	31.00
+GCC	231	23.00	28.00	30.00	19.00
+GCC	232	23.50	21.50	12.50	42.50
+GCC	233	21.00	27.00	25.00	27.00
+GCC	234	16.50	27.50	22.50	33.50
+GCC	235	20.00	15.00	28.00	37.00
+GCC	236	28.00	23.00	21.00	28.00
+GCC	237	20.50	19.50	22.50	37.50
+GCC	238	21.50	29.50	24.50	24.50
+GCC	239	20.00	8.00	17.00	55.00
+GCC	240	28.00	24.00	16.00	32.00
+GCC	241	22.50	22.50	16.50	38.50
+GCC	242	29.00	25.00	13.00	33.00
+GCC	243	22.50	15.50	23.50	38.50
+GCC	244	20.50	23.50	16.50	39.50
+GCC	245	28.00	23.00	19.00	30.00
+GCC	246	21.00	29.00	25.00	25.00
+GCC	247	32.00	14.00	13.00	41.00
+GCC	248	18.00	18.00	25.00	39.00
+GCC	249	25.00	23.00	21.00	31.00
+GCC	250	27.50	22.50	17.50	32.50
+GCC	251	13.50	20.50	36.50	29.50
+# Insert sizes. Use `grep ^IS | cut -f 2-` to extract this part. The columns are: insert size, pairs total, inward oriented pairs, outward oriented pairs, other pairs
 # Read lengths. Use `grep ^RL | cut -f 2-` to extract this part. The columns are: read length, count
-RL	70	1000
+RL	251	200
 # Indel distribution. Use `grep ^ID | cut -f 2-` to extract this part. The columns are: length, number of insertions, number of deletions
-ID	1	0	1
+ID	1	1	0
+ID	2	1	0
+ID	4	2	0
+ID	10	5	0
+ID	13	1	0
+ID	14	1	0
+ID	15	1	0
+ID	18	1	0
+ID	21	1	0
+ID	22	1	0
+ID	23	2	0
+ID	24	3	0
+ID	29	1	0
+ID	35	2	0
+ID	38	2	0
 # Indels per cycle. Use `grep ^IC | cut -f 2-` to extract this part. The columns are: cycle, number of insertions (fwd), .. (rev) , number of deletions (fwd), .. (rev)
-IC	8	0	0	1	0
+IC	2	1	0	0	0
+IC	4	2	0	0	0
+IC	5	3	0	0	0
+IC	210	2	0	0	0
+IC	219	1	0	0	0
+IC	220	1	0	0	0
+IC	224	2	0	0	0
+IC	225	2	0	0	0
+IC	226	1	0	0	0
+IC	228	1	0	0	0
+IC	230	1	0	0	0
+IC	233	1	0	0	0
+IC	234	1	0	0	0
+IC	235	1	0	0	0
+IC	236	1	0	0	0
+IC	239	1	0	0	0
+IC	240	1	0	0	0
+IC	241	1	0	0	0
+IC	247	1	0	0	0
 # Coverage distribution. Use `grep ^COV | cut -f 2-` to extract this part.
-COV	[1-1]	1	42
-COV	[2-2]	2	59
-COV	[3-3]	3	73
-COV	[4-4]	4	98
-COV	[5-5]	5	128
-COV	[6-6]	6	142
-COV	[7-7]	7	226
-COV	[8-8]	8	241
-COV	[9-9]	9	281
-COV	[10-10]	10	400
-COV	[11-11]	11	450
-COV	[12-12]	12	444
-COV	[13-13]	13	433
-COV	[14-14]	14	423
-COV	[15-15]	15	392
-COV	[16-16]	16	434
-COV	[17-17]	17	294
-COV	[18-18]	18	229
-COV	[19-19]	19	143
-COV	[20-20]	20	143
-COV	[21-21]	21	149
-COV	[22-22]	22	90
-COV	[23-23]	23	41
-COV	[24-24]	24	14
+COV	[1-1]	1	1
+COV	[7-7]	7	1
+COV	[18-18]	18	1
+COV	[24-24]	24	1
+COV	[25-25]	25	249
 # GC-depth. Use `grep ^GCD | cut -f 2-` to extract this part. The columns are: GC%, unique sequence percentiles, 10th, 25th, 50th, 75th and 90th depth percentile
-GCD	0.0	50.000	0.000	0.000	0.000	0.000	0.000
-GCD	44.0	75.000	14.875	14.875	14.875	14.875	14.875
-GCD	46.0	100.000	11.900	11.900	11.900	11.900	11.900
+GCD	0.0	100.000	0.000	0.000	0.000	0.000	0.000
diff -r cd6eb75c9819 -r cc56fc603e53 test-data/samtools_stats_out2/cov.tab
--- a/test-data/samtools_stats_out2/cov.tab	Mon Oct 20 14:56:49 2014 -0400
+++ /dev/null	Thu Jan 01 00:00:00 1970 +0000
@@ -1,24 +0,0 @@
-[1-1]	1	42
-[2-2]	2	59
-[3-3]	3	73
-[4-4]	4	98
-[5-5]	5	128
-[6-6]	6	142
-[7-7]	7	226
-[8-8]	8	241
-[9-9]	9	281
-[10-10]	10	400
-[11-11]	11	450
-[12-12]	12	444
-[13-13]	13	433
-[14-14]	14	423
-[15-15]	15	392
-[16-16]	16	434
-[17-17]	17	294
-[18-18]	18	229
-[19-19]	19	143
-[20-20]	20	143
-[21-21]	21	149
-[22-22]	22	90
-[23-23]	23	41
-[24-24]	24	14
diff -r cd6eb75c9819 -r cc56fc603e53 test-data/samtools_stats_out2/gcc.tab
--- a/test-data/samtools_stats_out2/gcc.tab	Mon Oct 20 14:56:49 2014 -0400
+++ b/test-data/samtools_stats_out2/gcc.tab	Tue Oct 13 12:56:27 2015 -0400
@@ -1,70 +1,252 @@
-1	21.50	23.30	24.50	30.70
-2	21.10	22.20	22.50	34.20
-3	22.20	20.50	26.80	30.50
-4	24.40	21.50	21.50	32.60
-5	23.50	21.10	25.60	29.80
-6	26.30	21.80	20.40	31.50
-7	25.40	20.50	22.00	32.10
-8	23.90	19.20	27.00	29.90
-9	23.70	22.70	22.00	31.60
-10	22.50	22.00	24.10	31.40
-11	22.40	21.50	22.10	34.00
-12	25.20	18.00	24.50	32.30
-13	23.70	20.80	21.70	33.80
-14	24.60	23.00	22.40	30.00
-15	25.50	22.30	22.50	29.70
-16	24.10	21.40	23.60	30.90
-17	24.30	21.00	23.90	30.80
-18	24.40	22.10	22.70	30.80
-19	25.60	20.50	24.70	29.20
-20	25.80	19.60	22.00	32.60
-21	23.20	22.90	23.00	30.90
-22	23.90	22.70	22.60	30.80
-23	25.80	21.30	22.40	30.50
-24	23.50	22.00	22.70	31.80
-25	22.40	21.80	23.10	32.70
-26	22.90	19.90	24.30	32.90
-27	23.10	22.10	24.20	30.60
-28	23.50	22.10	22.90	31.50
-29	24.40	21.80	21.30	32.50
-30	21.90	22.50	22.60	33.00
-31	23.10	20.90	24.20	31.80
-32	24.60	22.10	23.60	29.70
-33	22.80	21.10	22.00	34.10
-34	21.70	22.10	23.60	32.60
-35	24.30	23.20	20.60	31.90
-36	21.60	22.70	24.50	31.20
-37	22.20	23.50	22.20	32.10
-38	24.10	20.80	22.00	33.10
-39	22.20	21.10	26.80	29.90
-40	21.80	24.00	22.90	31.30
-41	25.10	22.90	23.10	28.90
-42	25.50	22.70	22.20	29.60
-43	22.60	23.00	24.10	30.30
-44	21.70	21.60	24.20	32.50
-45	21.80	22.70	21.20	34.30
-46	22.80	22.00	23.80	31.40
-47	23.70	22.30	23.90	30.10
-48	24.30	21.70	24.80	29.20
-49	23.90	22.00	22.90	31.20
-50	23.50	22.40	22.80	31.30
-51	23.30	20.40	24.70	31.60
-52	23.30	20.20	25.10	31.40
-53	23.70	22.00	22.30	32.00
-54	23.30	21.30	25.40	30.00
-55	25.30	21.40	22.60	30.70
-56	24.40	24.10	19.20	32.30
-57	22.00	21.50	24.50	32.00
-58	24.90	21.20	24.20	29.70
-59	24.10	21.70	24.50	29.70
-60	24.80	20.90	25.10	29.20
-61	21.30	21.60	28.10	29.00
-62	23.80	21.80	21.70	32.70
-63	23.30	22.80	23.50	30.40
-64	24.00	21.40	23.50	31.10
-65	24.40	22.80	22.50	30.30
-66	24.70	22.30	21.40	31.60
-67	22.40	21.10	24.60	31.90
-68	24.60	22.90	20.60	31.90
-69	22.40	23.00	23.10	31.50
-70	23.50	19.50	23.90	33.10
+# ACGT content per cycle. The columns are: cycle, and A,C,G,T counts (percent)
+1	21.50	29.50	33.50	15.50
+2	30.00	16.00	11.00	43.00
+3	33.00	25.00	9.00	33.00
+4	17.00	29.00	13.00	41.00
+5	37.00	22.00	12.00	29.00
+6	36.00	26.00	17.00	21.00
+7	29.50	13.50	31.50	25.50
+8	50.50	14.50	19.50	15.50
+9	17.00	33.00	18.00	32.00
+10	37.00	14.00	21.00	28.00
+11	20.50	14.50	29.50	35.50
+12	30.00	24.00	22.00	24.00
+13	27.00	15.00	21.00	37.00
+14	24.00	22.00	26.00	28.00
+15	25.50	20.50	24.50	29.50
+16	31.00	15.00	20.00	34.00
+17	28.00	25.00	14.00	33.00
+18	30.50	28.50	19.50	21.50
+19	29.00	26.00	21.00	24.00
+20	22.50	23.50	17.50	36.50
+21	35.50	17.50	19.50	27.50
+22	37.50	28.50	15.50	18.50
+23	31.00	19.00	13.00	37.00
+24	37.00	12.00	22.00	29.00
+25	35.50	22.50	17.50	24.50
+26	33.50	18.50	15.50	32.50
+27	34.50	14.50	25.50	25.50
+28	31.00	14.00	24.00	31.00
+29	30.00	27.00	24.00	19.00
+30	31.00	20.00	14.00	35.00
+31	33.50	29.50	13.50	23.50
+32	42.50	20.50	19.50	17.50
+33	25.50	23.50	14.50	36.50
+34	39.50	16.50	20.50	23.50
+35	32.50	23.50	21.50	22.50
+36	42.00	25.00	16.00	17.00
+37	38.00	17.00	19.00	26.00
+38	24.00	26.00	25.00	25.00
+39	22.50	41.50	18.50	17.50
+40	32.00	16.00	21.00	31.00
+41	33.00	28.00	19.00	20.00
+42	30.50	25.50	19.50	24.50
+43	35.00	29.00	15.00	21.00
+44	20.00	27.00	22.00	31.00
+45	40.50	21.50	21.50	16.50
+46	26.50	20.50	22.50	30.50
+47	38.50	29.50	16.50	15.50
+48	27.50	24.50	17.50	30.50
+49	28.50	32.50	10.50	28.50
+50	46.50	20.50	9.50	23.50
+51	34.50	28.50	13.50	23.50
+52	41.50	23.50	20.50	14.50
+53	20.00	28.00	26.00	26.00
+54	31.50	18.50	24.50	25.50
+55	30.50	22.50	16.50	30.50
+56	33.50	22.50	13.50	30.50
+57	23.00	24.00	23.00	30.00
+58	25.00	37.00	19.00	19.00
+59	34.00	23.00	24.00	19.00
+60	29.00	28.00	17.00	26.00
+61	25.50	23.50	24.50	26.50
+62	31.50	22.50	16.50	29.50
+63	27.50	28.50	25.50	18.50
+64	33.50	21.50	25.50	19.50
+65	35.50	19.50	18.50	26.50
+66	34.00	25.00	15.00	26.00
+67	37.00	23.00	19.00	21.00
+68	36.50	29.50	13.50	20.50
+69	38.50	19.50	20.50	21.50
+70	38.50	16.50	18.50	26.50
+71	25.50	38.50	21.50	14.50
+72	29.00	29.00	25.00	17.00
+73	32.50	20.50	21.50	25.50
+74	28.50	32.50	12.50	26.50
+75	41.50	12.50	18.50	27.50
+76	24.50	29.50	23.50	22.50
+77	36.00	21.00	18.00	25.00
+78	27.00	34.00	22.00	17.00
+79	21.50	26.50	25.50	26.50
+80	34.00	19.00	28.00	19.00
+81	17.00	26.00	26.00	31.00
+82	31.00	30.00	23.00	16.00
+83	31.50	26.50	12.50	29.50
+84	19.00	41.00	21.00	19.00
+85	37.50	24.50	16.50	21.50
+86	15.00	48.00	15.00	22.00
+87	41.00	16.00	18.00	25.00
+88	23.50	27.50	27.50	21.50
+89	26.50	27.50	26.50	19.50
+90	18.50	23.50	24.50	33.50
+91	27.00	32.00	22.00	19.00
+92	23.50	17.50	27.50	31.50
+93	25.50	37.50	15.50	21.50
+94	27.00	17.00	24.00	32.00
+95	26.50	37.50	14.50	21.50
+96	29.50	25.50	16.50	28.50
+97	29.00	31.00	21.00	19.00
+98	18.00	33.00	22.00	27.00
+99	24.50	33.50	24.50	17.50
+100	24.50	16.50	24.50	34.50
+101	25.00	40.00	19.00	16.00
+102	17.50	17.50	32.50	32.50
+103	31.00	26.00	16.00	27.00
+104	26.50	29.50	20.50	23.50
+105	34.00	33.00	21.00	12.00
+106	23.00	31.00	26.00	20.00
+107	17.50	35.50	23.50	23.50
+108	24.50	30.50	23.50	21.50
+109	17.00	31.00	22.00	30.00
+110	16.00	35.00	24.00	25.00
+111	24.00	32.00	23.00	21.00
+112	37.00	28.00	16.00	19.00
+113	19.50	22.50	32.50	25.50
+114	17.00	31.00	35.00	17.00
+115	29.50	24.50	23.50	22.50
+116	22.00	30.00	34.00	14.00
+117	27.00	23.00	19.00	31.00
+118	25.50	14.50	34.50	25.50
+119	22.50	34.50	20.50	22.50
+120	17.50	24.50	26.50	31.50
+121	27.50	33.50	22.50	16.50
+122	17.00	23.00	25.00	35.00
+123	23.50	46.50	11.50	18.50
+124	9.00	32.00	34.00	25.00
+125	24.00	27.00	19.00	30.00
+126	26.00	17.00	28.00	29.00
+127	26.50	16.50	21.50	35.50
+128	18.00	34.00	31.00	17.00
+129	25.50	25.50	27.50	21.50
+130	25.00	20.00	22.00	33.00
+131	17.50	39.50	24.50	18.50
+132	21.00	28.00	23.00	28.00
+133	13.50	31.50	35.50	19.50
+134	24.50	19.50	30.50	25.50
+135	16.50	23.50	30.50	29.50
+136	28.00	32.00	15.00	25.00
+137	22.50	21.50	30.50	25.50
+138	14.50	34.50	24.50	26.50
+139	20.50	29.50	24.50	25.50
+140	17.00	23.00	30.00	30.00
+141	20.50	23.50	25.50	30.50
+142	18.00	29.00	38.00	15.00
+143	22.00	24.00	27.00	27.00
+144	21.50	30.50	26.50	21.50
+145	22.00	21.00	29.00	28.00
+146	25.00	16.00	39.00	20.00
+147	26.50	22.50	30.50	20.50
+148	12.50	28.50	36.50	22.50
+149	26.50	23.50	23.50	26.50
+150	14.00	29.00	24.00	33.00
+151	19.50	30.50	32.50	17.50
+152	18.50	17.50	29.50	34.50
+153	22.50	22.50	31.50	23.50
+154	22.00	21.00	29.00	28.00
+155	21.00	26.00	19.00	34.00
+156	14.50	23.50	35.50	26.50
+157	22.00	31.00	23.00	24.00
+158	22.50	29.50	24.50	23.50
+159	17.50	12.50	46.50	23.50
+160	24.50	26.50	26.50	22.50
+161	13.00	23.00	45.00	19.00
+162	31.50	16.50	22.50	29.50
+163	19.50	21.50	35.50	23.50
+164	29.00	18.00	21.00	32.00
+165	14.50	17.50	35.50	32.50
+166	17.50	37.50	28.50	16.50
+167	16.50	21.50	31.50	30.50
+168	14.00	25.00	30.00	31.00
+169	18.50	20.50	23.50	37.50
+170	19.00	23.00	28.00	30.00
+171	20.00	28.00	33.00	19.00
+172	19.00	20.00	32.00	29.00
+173	24.50	16.50	33.50	25.50
+174	17.50	23.50	33.50	25.50
+175	33.50	17.50	35.50	13.50
+176	16.50	32.50	28.50	22.50
+177	19.00	22.00	27.00	32.00
+178	16.00	26.00	30.00	28.00
+179	18.00	18.00	22.00	42.00
+180	21.00	22.00	34.00	23.00
+181	20.50	19.50	35.50	24.50
+182	32.50	18.50	22.50	26.50
+183	24.50	13.50	28.50	33.50
+184	15.00	29.00	30.00	26.00
+185	15.00	32.00	33.00	20.00
+186	22.50	23.50	34.50	19.50
+187	19.00	14.00	40.00	27.00
+188	27.50	21.50	27.50	23.50
+189	17.00	22.00	34.00	27.00
+190	23.00	30.00	23.00	24.00
+191	25.00	22.00	28.00	25.00
+192	34.50	24.50	13.50	27.50
+193	18.50	25.50	25.50	30.50
+194	18.50	33.50	24.50	23.50
+195	16.00	26.00	23.00	35.00
+196	21.50	25.50	24.50	28.50
+197	20.00	21.00	23.00	36.00
+198	17.00	21.00	37.00	25.00
+199	20.50	18.50	25.50	35.50
+200	21.00	29.00	21.00	29.00
+201	27.00	21.00	23.00	29.00
+202	21.50	24.50	19.50	34.50
+203	21.50	24.50	26.50	27.50
+204	27.00	29.00	24.00	20.00
+205	19.50	21.50	22.50	36.50
+206	26.50	24.50	21.50	27.50
+207	22.50	21.50	19.50	36.50
+208	14.00	35.00	29.00	22.00
+209	16.00	23.00	12.00	49.00
+210	18.50	19.50	40.50	21.50
+211	26.00	20.00	22.00	32.00
+212	21.00	31.00	18.00	30.00
+213	24.00	15.00	31.00	30.00
+214	17.50	24.50	25.50	32.50
+215	26.00	24.00	23.00	27.00
+216	21.50	17.50	25.50	35.50
+217	26.00	29.00	17.00	28.00
+218	20.00	27.00	21.00	32.00
+219	17.00	21.00	21.00	41.00
+220	25.50	23.50	23.50	27.50
+221	21.50	23.50	20.50	34.50
+222	21.50	21.50	18.50	38.50
+223	20.00	27.00	28.00	25.00
+224	22.50	22.50	24.50	30.50
+225	14.50	35.50	30.50	19.50
+226	20.00	23.00	26.00	31.00
+227	20.50	24.50	23.50	31.50
+228	33.00	19.00	26.00	22.00
+229	22.50	24.50	18.50	34.50
+230	21.00	32.00	16.00	31.00
+231	23.00	28.00	30.00	19.00
+232	23.50	21.50	12.50	42.50
+233	21.00	27.00	25.00	27.00
+234	16.50	27.50	22.50	33.50
+235	20.00	15.00	28.00	37.00
+236	28.00	23.00	21.00	28.00
+237	20.50	19.50	22.50	37.50
+238	21.50	29.50	24.50	24.50
+239	20.00	8.00	17.00	55.00
+240	28.00	24.00	16.00	32.00
+241	22.50	22.50	16.50	38.50
+242	29.00	25.00	13.00	33.00
+243	22.50	15.50	23.50	38.50
+244	20.50	23.50	16.50	39.50
+245	28.00	23.00	19.00	30.00
+246	21.00	29.00	25.00	25.00
+247	32.00	14.00	13.00	41.00
+248	18.00	18.00	25.00	39.00
+249	25.00	23.00	21.00	31.00
+250	27.50	22.50	17.50	32.50
+251	13.50	20.50	36.50	29.50
diff -r cd6eb75c9819 -r cc56fc603e53 test-data/samtools_stats_out2/gcd.tab
--- a/test-data/samtools_stats_out2/gcd.tab	Mon Oct 20 14:56:49 2014 -0400
+++ /dev/null	Thu Jan 01 00:00:00 1970 +0000
@@ -1,3 +0,0 @@
-0.0	50.000	0.000	0.000	0.000	0.000	0.000
-44.0	75.000	14.875	14.875	14.875	14.875	14.875
-46.0	100.000	11.900	11.900	11.900	11.900	11.900
diff -r cd6eb75c9819 -r cc56fc603e53 test-data/samtools_stats_out2/gcf.tab
--- a/test-data/samtools_stats_out2/gcf.tab	Mon Oct 20 14:56:49 2014 -0400
+++ /dev/null	Thu Jan 01 00:00:00 1970 +0000
@@ -1,24 +0,0 @@
-14.82	0
-31.16	2
-33.42	6
-34.92	4
-36.18	6
-37.44	12
-38.94	28
-40.45	34
-41.96	37
-43.47	46
-44.72	55
-45.98	57
-47.49	68
-48.99	60
-50.50	27
-52.01	18
-53.52	15
-54.77	9
-56.03	4
-57.54	3
-59.05	2
-60.55	4
-62.06	0
-63.32	1
diff -r cd6eb75c9819 -r cc56fc603e53 test-data/samtools_stats_out2/gcl.tab
--- a/test-data/samtools_stats_out2/gcl.tab	Mon Oct 20 14:56:49 2014 -0400
+++ /dev/null	Thu Jan 01 00:00:00 1970 +0000
@@ -1,23 +0,0 @@
-14.07	0
-28.89	1
-30.40	3
-31.91	1
-33.42	2
-34.92	4
-36.18	8
-37.44	16
-38.94	31
-40.45	40
-41.96	39
-43.47	55
-44.72	46
-45.98	61
-47.49	53
-48.99	50
-50.50	32
-52.01	23
-53.52	11
-54.77	9
-56.03	8
-57.54	3
-61.06	1
diff -r cd6eb75c9819 -r cc56fc603e53 test-data/samtools_stats_out2/mpc.tab
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/samtools_stats_out2/mpc.tab	Tue Oct 13 12:56:27 2015 -0400
@@ -0,0 +1,253 @@
+# Columns correspond to qualities, rows to cycles. First column is the cycle number, second is the number of N's and the rest is the number of mismatches
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diff -r cd6eb75c9819 -r cc56fc603e53 test-data/samtools_stats_out2/sn.tab
--- a/test-data/samtools_stats_out2/sn.tab	Mon Oct 20 14:56:49 2014 -0400
+++ b/test-data/samtools_stats_out2/sn.tab	Tue Oct 13 12:56:27 2015 -0400
@@ -1,31 +1,33 @@
-raw total sequences:	1000
+# Summary Numbers
+
+raw total sequences:	200
 filtered sequences:	0
-sequences:	1000
+sequences:	200
 is sorted:	1
-1st fragments:	500
-last fragments:	500
-reads mapped:	972
-reads mapped and paired:	954	# paired-end technology bit set + both mates mapped
-reads unmapped:	28
+1st fragments:	100
+last fragments:	100
+reads mapped:	25
+reads mapped and paired:	0	# paired-end technology bit set + both mates mapped
+reads unmapped:	175
 reads properly paired:	0	# proper-pair bit set
-reads paired:	1000	# paired-end technology bit set
+reads paired:	200	# paired-end technology bit set
 reads duplicated:	0	# PCR or optical duplicate bit set
-reads MQ0:	0	# mapped and MQ=0
+reads MQ0:	6	# mapped and MQ=0
 reads QC failed:	0
 non-primary alignments:	0
-total length:	70000	# ignores clipping
-bases mapped:	68040	# ignores clipping
-bases mapped (cigar):	68040	# more accurate
+total length:	50200	# ignores clipping
+bases mapped:	6275	# ignores clipping
+bases mapped (cigar):	6275	# more accurate
 bases trimmed:	0
 bases duplicated:	0
-mismatches:	1237	# from NM fields
-error rate:	1.818048e-02	# mismatches / bases mapped (cigar)
-average length:	70
-maximum length:	70
-average quality:	17.0
-insert size average:	495.1
-insert size standard deviation:	48.9
-inward oriented pairs:	477
+mismatches:	591	# from NM fields
+error rate:	9.418327e-02	# mismatches / bases mapped (cigar)
+average length:	251
+maximum length:	251
+average quality:	34.7
+insert size average:	0.0
+insert size standard deviation:	0.0
+inward oriented pairs:	0
 outward oriented pairs:	0
 pairs with other orientation:	0
 pairs on different chromosomes:	0
diff -r cd6eb75c9819 -r cc56fc603e53 test-data/samtools_stats_ref.fa
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/samtools_stats_ref.fa	Tue Oct 13 12:56:27 2015 -0400
@@ -0,0 +1,239 @@
+>chrM
+GATCACAGGTCTATCACCCTATTAACCACTCACGGGAGCTCTCCATGCATTTGGTATTTTCGTCTGGGGG
+GTATGCACGCGATAGCATTGCGAGACGCTGGAGCCGGAGCACCCTATGTCGCAGTATCTGTCTTTGATTC
+CTGCCTCATCCTATTATTTATCGCACCTACGTTCAATATTACAGGCGAACATACTTACTAAAGTGTGTTA
+ATTAATTAATGCTTGTAGGACATAATAATAACAATTGAATGTCTGCACAGCCACTTTCCACACAGACATC
+ATAACAAAAAATTTCCACCAAACCCCCCCTCCCCCGCTTCTGGCCACAGCACTTAAACACATCTCTGCCA
+AACCCCAAAAACAAAGAACCCTAACACCAGCCTAACCAGATTTCAAATTTTATCTTTTGGCGGTATGCAC
+TTTTAACAGTCACCCCCCAACTAACACATTATTTTCCCCTCCCACTCCCATACTACTAATCTCATCAATA
+CAACCCCCGCCCATCCTACCCAGCACACACACACCGCTGCTAACCCCATACCCCGAACCAACCAAACCCC
+AAAGACACCCCCCACAGTTTATGTAGCTTACCTCCTCAAAGCAATACACTGAAAATGTTTAGACGGGCTC
+ACATCACCCCATAAACAAATAGGTTTGGTCCTAGCCTTTCTATTAGCTCTTAGTAAGATTACACATGCAA
+GCATCCCCGTTCCAGTGAGTTCACCCTCTAAATCACCACGATCAAAAGGAACAAGCATCAAGCACGCAGC
+AATGCAGCTCAAAACGCTTAGCCTAGCCACACCCCCACGGGAAACAGCAGTGATTAACCTTTAGCAATAA
+ACGAAAGTTTAACTAAGCTATACTAACCCCAGGGTTGGTCAATTTCGTGCCAGCCACCGCGGTCACACGA
+TTAACCCAAGTCAATAGAAGCCGGCGTAAAGAGTGTTTTAGATCACCCCCTCCCCAATAAAGCTAAAACT
+CACCTGAGTTGTAAAAAACTCCAGTTGACACAAAATAGACTACGAAAGTGGCTTTAACATATCTGAACAC
+ACAATAGCTAAGACCCAAACTGGGATTAGATACCCCACTATGCTTAGCCCTAAACCTCAACAGTTAAATC
+AACAAAACTGCTCGCCAGAACACTACGAGCCACAGCTTAAAACTCAAAGGACCTGGCGGTGCTTCATATC
+CCTCTAGAGGAGCCTGTTCTGTAATCGATAAACCCCGATCAACCTCACCACCTCTTGCTCAGCCTATATA
+CCGCCATCTTCAGCAAACCCTGATGAAGGCTACAAAGTAAGCGCAAGTACCCACGTAAAGACGTTAGGTC
+AAGGTGTAGCCCATGAGGTGGCAAGAAATGGGCTACATTTTCTACCCCAGAAAACTACGATAGCCCTTAT
+GAAACTTAAGGGTCGAAGGTGGATTTAGCAGTAAACTAAGAGTAGAGTGCTTAGTTGAACAGGGCCCTGA
+AGCGCGTACACACCGCCCGTCACCCTCCTCAAGTATACTTCAAAGGACATTTAACTAAAACCCCTACGCA
+TTTATATAGAGGAGACAAGTCGTAACATGGTAAGTGTACTGGAAAGTGCACTTGGACGAACCAGAGTGTA
+GCTTAACACAAAGCACCCAACTTACACTTAGGAGATTTCAACTTAACTTGACCGCTCTGAGCTAAACCTA
+GCCCCAAACCCACTCCACCTTACTACCAGACAACCTTAGCCAAACCATTTACCCAAATAAAGTATAGGCG
+ATAGAAATTGAAACCTGGCGCAATAGATATAGTACCGCAAGGGAAAGATGAAAAATTATAACCAAGCATA
+ATATAGCAAGGACTAACCCCTATACCTTCTGCATAATGAATTAACTAGAAATAACTTTGCAAGGAGAGCC
+AAAGCTAAGACCCCCGAAACCAGACGAGCTACCTAAGAACAGCTAAAAGAGCACACCCGTCTATGTAGCA
+AAATAGTGGGAAGATTTATAGGTAGAGGCGACAAACCTACCGAGCCTGGTGATAGCTGGTTGTCCAAGAT
+AGAATCTTAGTTCAACTTTAAATTTGCCCACAGAACCCTCTAAATCCCCTTGTAAATTTAACTGTTAGTC
+CAAAGAGGAACAGCTCTTTGGACACTAGGAAAAAACCTTGTAGAGAGAGTAAAAAATTTAACACCCATAG
+TAGGCCTAAAAGCAGCCACCAATTAAGAAAGCGTTCAAGCTCAACACCCACTACCTAAAAAATCCCAAAC
+ATATAACTGAACTCCTCACACCCAATTGGACCAATCTATCACCCTATAGAAGAACTAATGTTAGTATAAG
+TAACATGAAAACATTCTCCTCCGCATAAGCCTGCGTCAGATTAAAACACTGAACTGACAATTAACAGCCC
+AATATCTACAATCAACCAACAAGTCATTATTACCCTCACTGTCAACCCAACACAGGCATGCTCATAAGGA
+AAGGTTAAAAAAAGTAAAAGGAACTCGGCAAATCTTACCCCGCCTGTTTACCAAAAACATCACCTCTAGC
+ATCACCAGTATTAGAGGCACCGCCTGCCCAGTGACACATGTTTAACGGCCGCGGTACCCTAACCGTGCAA
+AGGTAGCATAATCACTTGTTCCTTAAATAGGGACCTGTATGAATGGCTCCACGAGGGTTCAGCTGTCTCT
+TACTTTTAACCAGTGAAATTGACCTGCCCGTGAAGAGGCGGGCATAACACAGCAAGACGAGAAGACCCTA
+TGGAGCTTTAATTTATTAATGCAAACAGTACCTAACAAACCCACAGGTCCTAAACTACCAAACCTGCATT
+AAAAATTTCGGTTGGGGCGACCTCGGAGCAGAACCCAACCTCCGAGCAGTACATGCTAAGACTTCACCAG
+TCAAAGCGAACTACTATACTCAATTGATCCAATAACTTGACCAACGGAACAAGTTACCCTAGGGATAACA
+GCGCAATCCTATTCTAGAGTCCATATCAACAATAGGGTTTACGACCTCGATGTTGGATCAGGACATCCCG
+ATGGTGCAGCCGCTATTAAAGGTTCGTTTGTTCAACGATTAAAGTCCTACGTGATCTGAGTTCAGACCGG
+AGTAATCCAGGTCGGTTTCTATCTACNTTCAAATTCCTCCCTGTACGAAAGGACAAGAGAAATAAGGCCT
+ACTTCACAAAGCGCCTTCCCCCGTAAATGATATCATCTCAACTTAGTATTATACCCACACCCACCCAAGA
+ACAGGGTTTGTTAAGATGGCAGAGCCCGGTAATCGCATAAAACTTAAAACTTTACAGTCAGAGGTTCAAT
+TCCTCTTCTTAACAACATACCCATGGCCAACCTCCTACTCCTCATTGTACCCATTCTAATCGCAATGGCA
+TTCCTAATGCTTACCGAACGAAAAATTCTAGGCTATATACAACTACGCAAAGGCCCCAACGTTGTAGGCC
+CCTACGGGCTACTACAACCCTTCGCTGACGCCATAAAACTCTTCACCAAAGAGCCCCTAAAACCCGCCAC
+ATCTACCATCACCCTCTACATCACCGCCCCGACCTTAGCTCTCACCATCGCTCTTCTACTATGAACCCCC
+CTCCCCATACCCAACCCCCTGGTCAACCTCAACCTAGGCCTCCTATTTATTCTAGCCACCTCTAGCCTAG
+CCGTTTACTCAATCCTCTGATCAGGGTGAGCATCAAACTCAAACTACGCCCTGATCGGCGCACTGCGAGC
+AGTAGCCCAAACAATCTCATATGAAGTCACCCTAGCCATCATTCTACTATCAACATTACTAATAAGTGGC
+TCCTTTAACCTCTCCACCCTTATCACAACACAAGAACACCTCTGATTACTCCTGCCATCATGACCCTTGG
+CCATAATATGATTTATCTCCACACTAGCAGAGACCAACCGAACCCCCTTCGACCTTGCCGAAGGGGAGTC
+CGAACTAGTCTCAGGCTTCAACATCGAATACGCCGCAGGCCCCTTCGCCCTATTCTTCATAGCCGAATAC
+ACAAACATTATTATAATAAACACCCTCACCACTACAATCTTCCTAGGAACAACATATGACGCACTCTCCC
+CTGAACTCTACACAACATATTTTGTCACCAAGACCCTACTTCTAACCTCCCTGTTCTTATGAATTCGAAC
+AGCATACCCCCGATTCCGCTACGACCAACTCATACACCTCCTATGAAAAAACTTCCTACCACTCACCCTA
+GCATTACTTATATGATATGTCTCCATACCCATTACAATCTCCAGCATTCCCCCTCAAACCTAAGAAATAT
+GTCTGATAAAAGAGTTACTTTGATAGAGTAAATAATAGGAGCTTAAACCCCCTTATTTCTAGGACTATGA
+GAATCGAACCCATCCCTGAGAATCCAAAATTCTCCGTGCCACCTATCACACCCCATCCTAAAGTAAGGTC
+AGCTAAATAAGCTATCGGGCCCATACCCCGAAAATGTTGGTTATACCCTTCCCGTACTAATTAATCCCCT
+GGCCCAACCCGTCATCTACTCTACCATCTTTGCAGGCACACTCATCACAGCGCTAAGCTCGCACTGATTT
+TTTACCTGAGTAGGCCTAGAAATAAACATGCTAGCTTTTATTCCAGTTCTAACCAAAAAAATAAACCCTC
+GTTCCACAGAAGCTGCCATCAAGTATTTCCTCACGCAAGCAACCGCATCCATAATCCTTCTAATAGCTAT
+CCTCTTCAACAATATACTCTCCGGACAATGAACCATAACCAATACTACCAATCAATACTCATCATTAATA
+ATCATAATAGCTATAGCAATAAAACTAGGAATAGCCCCCTTTCACTTCTGAGTCCCAGAGGTTACCCAAG
+GCACCCCTCTGACATCCGGCCTGCTTCTTCTCACATGACAAAAACTAGCCCCCATCTCAATCATATACCA
+AATCTCTCCCTCACTAAACGTAAGCCTTCTCCTCACTCTCTCAATCTTATCCATCATAGCAGGCAGTTGA
+GGTGGATTAAACCAAACCCAGCTACGCAAAATCTTAGCATACTCCTCAATTACCCACATAGGATGAATAA
+TAGCAGTTCTACCGTACAACCCTAACATAACCATTCTTAATTTAACTATTTATATTATCCTAACTACTAC
+CGCATTCCTACTACTCAACTTAAACTCCAGCACCACGACCCTACTACTATCTCGCACCTGAAACAAGCTA
+ACATGACTAACACCCTTAATTCCATCCACCCTCCTCTCCCTAGGAGGCCTGCCCCCGCTAACCGGCTTTT
+TGCCCAAATGGGCCATTATCGAAGAATTCACAAAAAACAATAGCCTCATCATCCCCACCATCATAGCCAC
+CATCACCCTCCTTAACCTCTACTTCTACCTACGCCTAATCTACTCCACCTCAATCACACTACTCCCCATA
+TCTAACAACGTAAAAATAAAATGACAGTTTGAACATACAAAACCCACCCCATTCCTCCCCACACTCATCG
+CCCTTACCACGCTACTCCTACCTATCTCCCCTTTTATACTAATAATCTTATAGAAATTTAGGTTAAATAC
+AGACCAAGAGCCTTCAAAGCCCTCAGTAAGTTGCAATACTTAATTTCTGTAACAGCTAAGGACTGCAAAA
+CCCCACTCTGCATCAACTGAACGCAAATCAGCCACTTTAATTAAGCTAAGCCCTTACTAGACCAATGGGA
+CTTAAACCCACAAACACTTAGTTAACAGCTAAGCACCCTAATCAACTGGCTTCAATCTACTTCTCCCGCC
+GCCGGGAAAAAAGGCGGGAGAAGCCCCGGCAGGTTTGAAGCTGCTTCTTCGAATTTGCAATTCAATATGA
+AAATCACCTCGGAGCTGGTAAAAAGAGGCCTAACCCCTGTCTTTAGATTTACAGTCCAATGCTTCACTCA
+GCCATTTTACCTCACCCCCACTGATGTTCGCCGACCGTTGACTATTCTCTACAAACCACAAAGACATTGG
+AACACTATACCTATTATTCGGCGCATGAGCTGGAGTCCTAGGCACAGCTCTAAGCCTCCTTATTCGAGCC
+GAGCTGGGCCAGCCAGGCAACCTTCTAGGTAACGACCACATCTACAACGTTATCGTCACAGCCCATGCAT
+TTGTAATAATCTTCTTCATAGTAATACCCATCATAATCGGAGGCTTTGGCAACTGACTAGTTCCCCTAAT
+AATCGGTGCCCCCGATATGGCGTTTCCCCGCATAAACAACATAAGCTTCTGACTCTTACCTCCCTCTCTC
+CTACTCCTGCTCGCATCTGCTATAGTGGAGGCCGGAGCAGGAACAGGTTGAACAGTCTACCCTCCCTTAG
+CAGGGAACTACTCCCACCCTGGAGCCTCCGTAGACCTAACCATCTTCTCCTTACACCTAGCAGGTGTCTC
+CTCTATCTTAGGGGCCATCAATTTCATCACAACAATTATCAATATAAAACCCCCTGCCATAACCCAATAC
+CAAACGCCCCTCTTCGTCTGATCCGTCCTAATCACAGCAGTCCTACTTCTCCTATCTCTCCCAGTCCTAG
+CTGCTGGCATCACTATACTACTAACAGACCGCAACCTCAACACCACCTTCTTCGACCCCGCCGGAGGAGG
+AGACCCCATTCTATACCAACACCTATTCTGATTTTTCGGTCACCCTGAAGTTTATATTCTTATCCTACCA
+GGCTTCGGAATAATCTCCCATATTGTAACTTACTACTCCGGAAAAAAAGAACCATTTGGATACATAGGTA
+TGGTCTGAGCTATGATATCAATTGGCTTCCTAGGGTTTATCGTGTGAGCACACCATATATTTACAGTAGG
+AATAGACGTAGACACACGAGCATATTTCACCTCCGCTACCATAATCATCGCTATCCCCACCGGCGTCAAA
+GTATTTAGCTGACTCGCCACACTCCACGGAAGCAATATGAAATGATCTGCTGCAGTGCTCTGAGCCCTAG
+GATTCATCTTTCTTTTCACCGTAGGTGGCCTGACTGGCATTGTATTAGCAAACTCATCACTAGACATCGT
+ACTACACGACACGTACTACGTTGTAGCCCACTTCCACTATGTCCTATCAATAGGAGCTGTATTTGCCATC
+ATAGGAGGCTTCATTCACTGATTTCCCCTATTCTCAGGCTACACCCTAGACCAAACCTACGCCAAAATCC
+ATTTCACTATCATATTCATCGGCGTAAATCTAACTTTCTTCCCACAACACTTTCTCGGCCTATCCGGAAT
+GCCCCGACGTTACTCGGACTACCCCGATGCATACACCACATGAAACATCCTATCATCTGTAGGCTCATTC
+ATTTCTCTAACAGCAGTAATATTAATAATTTTCATGATTTGAGAAGCCTTCGCTTCGAAGCGAAAAGTCC
+TAATAGTAGAAGAACCCTCCATAAACCTGGAGTGACTATATGGATGCCCCCCACCCTACCACACATTCGA
+AGAACCCGTATACATAAAATCTAGACAAAAAAGGAAGGAATCGAACCCCCCAAAGCTGGTTTCAAGCCAA
+CCCCATGGCCTCCATGACTTTTTCAAAAAGGTATTAGAAAAACCATTTCATAACTTTGTCAAAGTTAAAT
+TATAGGCTAAATCCTATATATCTTAATGGCACATGCAGCGCAAGTAGGTCTACAAGACGCTACTTCCCCT
+ATCATAGAAGAGCTTATCACCTTTCATGATCACGCCCTCATAATCATTTTCCTTATCTGCTTCCTAGTCC
+TGTATGCCCTTTTCCTAACACTCACAACAAAACTAACTAATACTAACATCTCAGACGCTCAGGAAATAGA
+AACCGTCTGAACTATCCTGCCCGCCATCATCCTAGTCCTCATCGCCCTCCCATCCCTACGCATCCTTTAC
+ATAACAGACGAGGTCAACGATCCCTCCCTTACCATCAAATCAATTGGCCACCAATGGTACTGAACCTACG
+AGTACACCGACTACGGCGGACTAATCTTCAACTCCTACATACTTCCCCCATTATTCCTAGAACCAGGCGA
+CCTGCGACTCCTTGACGTTGACAATCGAGTAGTACTCCCGATTGAAGCCCCCATTCGTATAATAATTACA
+TCACAAGACGTCTTGCACTCATGAGCTGTCCCCACATTAGGCTTAAAAACAGATGCAATTCCCGGACGTC
+TAAACCAAACCACTTTCACCGCTACACGACCGGGGGTATACTACGGTCAATGCTCTGAAATCTGTGGAGC
+AAACCACAGTTTCATGCCCATCGTCCTAGAATTAATTCCCCTAAAAATCTTTGAAATAGGGCCCGTATTT
+ACCCTATAGCACCCCCTCTACCCCCTCTAGAGCCCACTGTAAAGCTAACTTAGCATTAACCTTTTAAGTT
+AAAGATTAAGAGAACCAACACCTCTTTACAGTGAAATGCCCCAACTAAATACTACCGTATGGCCCACCAT
+AATTACCCCCATACTCCTTACACTATTCCTCATCACCCAACTAAAAATATTAAACACAAACTACCACCTA
+CCTCCCTCACCAAAGCCCATAAAAATAAAAAATTATAACAAACCCTGAGAACCAAAATGAACGAAAATCT
+GTTCGCTTCATTCATTGCCCCCACAATCCTAGGCCTACCCGCCGCAGTACTGATCATTCTATTTCCCCCT
+CTATTGATCCCCACCTCCAAATATCTCATCAACAACCGACTAATCACCACCCAACAATGACTAATCAAAC
+TAACCTCAAAACAAATGATAACCATACACAACACTAAAGGACGAACCTGATCTCTTATACTAGTATCCTT
+AATCATTTTTATTGCCACAACTAACCTCCTCGGACTCCTGCCTCACTCATTTACACCAACCACCCAACTA
+TCTATAAACCTAGCCATGGCCATCCCCTTATGAGCGGGCACAGTGATTATAGGCTTTCGCTCTAAGATTA
+AAAATGCCCTAGCCCACTTCTTACCACAAGGCACACCTACACCCCTTATCCCCATACTAGTTATTATCGA
+AACCATCAGCCTACTCATTCAACCAATAGCCCTGGCCGTACGCCTAACCGCTAACATTACTGCAGGCCAC
+CTACTCATGCACCTAATTGGAAGCGCCACCCTAGCAATATCAACCATTAACCTTCCCTCTACACTTATCA
+TCTTCACAATTCTAATTCTACTGACTATCCTAGAAATCGCTGTCGCCTTAATCCAAGCCTACGTTTTCAC
+ACTTCTAGTAAGCCTCTACCTGCACGACAACACATAATGACCCACCAATCACATGCCTATCATATAGTAA
+AACCCAGCCCATGACCCCTAACAGGGGCCCTCTCAGCCCTCCTAATGACCTCCGGCCTAGCCATGTGATT
+TCACTTCCACTCCATAACGCTCCTCATACTAGGCCTACTAACCAACACACTAACCATATACCAATGATGG
+CGCGATGTAACACGAGAAAGCACATACCAAGGCCACCACACACCACCTGTCCAAAAAGGCCTTCGATACG
+GGATAATCCTATTTATTACCTCAGAAGTTTTTTTCTTCGCAGGATTTTTCTGAGCCTTTTACCACTCCAG
+CCTAGCCCCTACCCCCCAATTAGGAGGGCACTGGCCCCCAACAGGCATCACCCCGCTAAATCCCCTAGAA
+GTCCCACTCCTAAACACATCCGTATTACTCGCATCAGGAGTATCAATCACCTGAGCTCACCATAGTCTAA
+TAGAAAACAACCGAAACCAAATAATTCAAGCACTGCTTATTACAATTTTACTGGGTCTCTATTTTACCCT
+CCTACAAGCCTCAGAGTACTTCGAGTCTCCCTTCACCATTTCCGACGGCATCTACGGCTCAACATTTTTT
+GTAGCCACAGGCTTCCACGGACTTCACGTCATTATTGGCTCAACTTTCCTCACTATCTGCTTCATCCGCC
+AACTAATATTTCACTTTACATCCAAACATCACTTTGGCTTCGAAGCCGCCGCCTGATACTGGCATTTTGT
+AGATGTGGTTTGACTATTTCTGTATGTCTCCATCTATTGATGAGGGTCTTACTCTTTTAGTATAAATAGT
+ACCGTTAACTTCCAATTAACTAGTTTTGACAACATTCAAAAAAGAGTAATAAACTTCGCCTTAATTTTAA
+TAATCAACACCCTCCTAGCCTTACTACTAATAATTATTACATTTTGACTACCACAACTCAACGGCTACAT
+AGAAAAATCCACCCCTTACGAGTGCGGCTTCGACCCTATATCCCCCGCCCGCGTCCCTTTCTCCATAAAA
+TTCTTCTTAGTAGCTATTACCTTCTTATTATTTGATCTAGAAATTGCCCTCCTTTTACCCCTACCATGAG
+CCCTACAAACAACTAACCTGCCACTAATAGTTATGTCATCCCTCTTATTAATCATCATCCTAGCCCTAAG
+TCTGGCCTATGAGTGACTACAAAAAGGATTAGACTGAACCGAATTGGTATATAGTTTAAACAAAACGAAT
+GATTTCGACTCATTAAATTATGATAATCATATTTACCAAATGCCCCTCATTTACATAAATATTATACTAG
+CATTTACCATCTCACTTCTAGGAATACTAGTATATCGCTCACACCTCATATCCTCCCTACTATGCCTAGA
+AGGAATAATACTATCGCTGTTCATTATAGCTACTCTCATAACCCTCAACACCCACTCCCTCTTAGCCAAT
+ATTGTGCCTATTGCCATACTAGTCTTTGCCGCCTGCGAAGCAGCGGTGGGCCTAGCCCTACTAGTCTCAA
+TCTCCAACACATATGGCCTAGACTACGTACATAACCTAAACCTACTCCAATGCTAAAACTAATCGTCCCA
+ACAATTATATTACTACCACTGACATGACTTTCCAAAAAACACATAATTTGAATCAACACAACCACCCACA
+GCCTAATTATTAGCATCATCCCTCTACTATTTTTTAACCAAATCAACAACAACCTATTTAGCTGTTCCCC
+AACCTTTTCCTCCGACCCCCTAACAACCCCCCTCCTAATACTAACTACCTGACTCCTACCCCTCACAATC
+ATGGCAAGCCAACGCCACTTATCCAGTGAACCACTATCACGAAAAAAACTCTACCTCTCTATACTAATCT
+CCCTACAAATCTCCTTAATTATAACATTCACAGCCACAGAACTAATCATATTTTATATCTTCTTCGAAAC
+CACACTTATCCCCACCTTGGCTATCATCACCCGATGAGGCAACCAGCCAGAACGCCTGAACGCAGGCACA
+TACTTCCTATTCTACACCCTAGTAGGCTCCCTTCCCCTACTCATCGCACTAATTTACACTCACAACACCC
+TAGGCTCACTAAACATTCTACTACTCACTCTCACTGCCCAAGAACTATCAAACTCCTGAGCCAACAACTT
+AATATGACTAGCTTACACAATAGCTTTTATAGTAAAGATACCTCTTTACGGACTCCACTTATGACTCCCT
+AAAGCCCATGTCGAAGCCCCCATCGCTGGGTCAATAGTACTTGCCGCAGTACTCTTAAAACTAGGCGGCT
+ATGGTATAATACGCCTCACACTCATTCTCAACCCCCTGACAAAACACATAGCCTACCCCTTCCTTGTACT
+ATCCCTATGAGGCATAATTATAACAAGCTCCATCTGCCTACGACAAACAGACCTAAAATCGCTCATTGCA
+TACTCTTCAATCAGCCACATAGCCCTCGTAGTAACAGCCATTCTCATCCAAACCCCCTGAAGCTTCACCG
+GCGCAGTCATTCTCATAATCGCCCACGGGCTTACATCCTCATTACTATTCTGCCTAGCAAACTCAAACTA
+CGAACGCACTCACAGTCGCATCATAATCCTCTCTCAAGGACTTCAAACTCTACTCCCACTAATAGCTTTT
+TGATGACTTCTAGCAAGCCTCGCTAACCTCGCCTTACCCCCCACTATTAACCTACTGGGAGAACTCTCTG
+TGCTAGTAACCACGTTCTCCTGATCAAATATCACTCTCCTACTTACAGGACTCAACATACTAGTCACAGC
+CCTATACTCCCTCTACATATTTACCACAACACAATGGGGCTCACTCACCCACCACATTAACAACATAAAA
+CCCTCATTCACACGAGAAAACACCCTCATGTTCATACACCTATCCCCCATTCTCCTCCTATCCCTCAACC
+CCGACATCATTACCGGGTTTTCCTCTTGTAAATATAGTTTAACCAAAACATCAGATTGTGAATCTGACAA
+CAGAGGCTTACGACCCCTTATTTACCGAGAAAGCTCACAAGAACTGCTAACTCATGCCCCCATGTCTAAC
+AACATGGCTTTCTCAACTTTTAAAGGATAACAGCTATCCATTGGTCTTAGGCCCCAAAAATTTTGGTGCA
+ACTCCAAATAAAAGTAATAACCATGCACACTACTATAACCACCCTAACCCTGACTTCCCTAATTCCCCCC
+ATCCTTACCACCCTCGTTAACCCTAACAAAAAAAACTCATACCCCCATTATGTAAAATCCATTGTCGCAT
+CCACCTTTATTATCAGTCTCTTCCCCACAACAATATTCATGTGCCTAGACCAAGAAGTTATTATCTCGAA
+CTGACACTGAGCCACAACCCAAACAACCCAGCTCTCCCTAAGCTTCAAACTAGACTACTTCTCCATAATA
+TTCATCCCTGTAGCATTGTTCGTTACATGGTCCATCATAGAATTCTCACTGTGATATATAAACTCAGACC
+CAAACATTAATCAGTTCTTCAAATATCTACTCATCTTCCTAATTACCATACTAATCTTAGTTACCGCTAA
+CAACCTATTCCAACTGTTCATCGGCTGAGAGGGCGTAGGAATTATATCCTTCTTGCTCATCAGTTGATGA
+TACGCCCGAGCAGATGCCAACACAGCAGCCATTCAAGCAATCCTATACAACCGTATCGGCGATATCGGTT
+TCATCCTCGCCTTAGCATGATTTATCCTACACTCCAACTCATGAGACCCACAACAAATAGCCCTTCTAAA
+CGCTAATCCAAGCCTCACCCCACTACTAGGCCTCCTCCTAGCAGCAGCAGGCAAATCAGCCCAATTAGGT
+CTCCACCCCTGACTCCCCTCAGCCATAGAAGGCCCCACCCCAGTCTCAGCCCTACTCCACTCAAGCACTA
+TAGTTGTAGCAGGAATCTTCTTACTCATCCGCTTCCACCCCCTAGCAGAAAATAGCCCACTAATCCAAAC
+TCTAACACTATGCTTAGGCGCTATCACCACTCTGTTCGCAGCAGTCTGCGCCCTTACACAAAATGACATC
+AAAAAAATCGTAGCCTTCTCCACTTCAAGTCAACTAGGACTCATAATAGTTACAATCGGCATCAACCAAC
+CACACCTAGCATTCCTGCACATCTGTACCCACGCCTTCTTCAAAGCCATACTATTTATGTGCTCCGGGTC
+CATCATCCACAACCTTAACAATGAACAAGATATTCGAAAAATAGGAGGACTACTCAAAACCATACCTCTC
+ACTTCAACCTCCCTCACCATTGGCAGCCTAGCATTAGCAGGAATACCTTTCCTCACAGGTTTCTACTCCA
+AAGACCACATCATCGAAACCGCAAACATATCATACACAAACGCCTGAGCCCTATCTATTACTCTCATCGC
+TACCTCCCTGACAAGCGCCTATAGCACTCGAATAATTCTTCTCACCCTAACAGGTCAACCTCGCTTCCCC
+ACCCTTACTAACATTAACGAAAATAACCCCACCCTACTAAACCCCATTAAACGCCTGGCAGCCGGAAGCC
+TATTCGCAGGATTTCTCATTACTAACAACATTTCCCCCGCATCCCCCTTCCAAACAACAATCCCCCTCTA
+CCTAAAACTCACAGCCCTCGCTGTCACTTTCCTAGGACTTCTAACAGCCCTAGACCTCAACTACCTAACC
+AACAAACTTAAAATAAAATCCCCACTATGCACATTTTATTTCTCCAACATACTCGGATTCTACCCTAGCA
+TCACACACCGCACAATCCCCTATCTAGGCCTTCTTACGAGCCAAAACCTGCCCCTACTCCTCCTAGACCT
+AACCTGACTAGAAAAGCTATTACCTAAAACAATTTCACAGCACCAAATCTCCACCTCCATCATCACCTCA
+ACCCAAAAAGGCATAATTAAACTTTACTTCCTCTCTTTCTTCTTCCCACTCATCCTAACCCTACTCCTAA
+TCACATAACCTATTCCCCCGAGCAATCTCAATTACAATATATACACCAACAAACAATGTTCAACCAGTAA
+CTACTACTAATCAACGCCCATAATCATACAAAGCCCCCGCACCAATAGGATCCTCCCGAATCAACCCTGA
+CCCCTCTCCTTCATAAATTATTCAGCTTCCTACACTATTAAAGTTTACCACAACCACCACCCCATCATAC
+TCTTTCACCCACAGCACCAATCCTACCTCCATCGCTAACCCCACTAAAACACTCACCAAGACCTCAACCC
+CTGACCCCCATGCCTCAGGATACTCCTCAATAGCCATCGCTGTAGTATATCCAAAGACAACCATCATTCC
+CCCTAAATAAATTAAAAAAACTATTAAACCCATATAACCTCCCCCAAAATTCAGAATAATAACACACCCG
+ACCACACCGCTAACAATCAATACTAAACCCCCATAAATAGGAGAAGGCTTAGAAGAAAACCCCACAAACC
+CCATTACTAAACCCACACTCAACAGAAACAAAGCATACATCATTATTCTCGCACGGACTACAACCACGAC
+CAATGATATGAAAAACCATCGTTGTATTTCAACTACAAGAACACCAATGACCCCAATACGCAAAACTAAC
+CCCCTAATAAAATTAATTAACCACTCATTCATCGACCTCCCCACCCCATCCAACATCTCCGCATGATGAA
+ACTTCGGCTCACTCCTTGGCGCCTGCCTGATCCTCCAAATCACCACAGGACTATTCCTAGCCATGCACTA
+CTCACCAGACGCCTCAACCGCCTTTTCATCAATCGCCCACATCACTCGAGACGTAAATTATGGCTGAATC
+ATCCGCTACCTTCACGCCAATGGCGCCTCAATATTCTTTATCTGCCTCTTCCTACACATCGGGCGAGGCC
+TATATTACGGATCATTTCTCTACTCAGAAACCTGAAACATCGGCATTATCCTCCTGCTTGCAACTATAGC
+AACAGCCTTCATAGGCTATGTCCTCCCGTGAGGCCAAATATCATTCTGAGGGGCCACAGTAATTACAAAC
+TTACTATCCGCCATCCCATACATTGGGACAGACCTAGTTCAATGAATCTGAGGAGGCTACTCAGTAGACA
+GTCCCACCCTCACACGATTCTTTACCTTTCACTTCATCTTGCCCTTCATTATTGCAGCCCTAGCAACACT
+CCACCTCCTATTCTTGCACGAAACGGGATCAAACAACCCCCTAGGAATCACCTCCCATTCCGATAAAATC
+ACCTTCCACCCTTACTACACAATCAAAGACGCCCTCGGCTTACTTCTCTTCCTTCTCTCCTTAATGACAT
+TAACACTATTCTCACCAGACCTCCTAGGCGACCCAGACAATTATACCCTAGCCAACCCCTTAAACACCCC
+TCCCCACATCAAGCCCGAATGATATTTCCTATTCGCCTACACAATTCTCCGATCCGTCCCTAACAAACTA
+GGAGGCGTCCTTGCCCTATTACTATCCATCCTCATCCTAGCAATAATCCCCATCCTCCATATATCCAAAC
+AACAAAGCATAATATTTCGCCCACTAAGCCAATCACTTTATTGACTCCTAGCCGCAGACCTCCTCATTCT
+AACCTGAATCGGAGGACAACCAGTAAGCTACCCTTTTACCATCATTGGACAAGTAGCATCCGTACTATAC
+TTCACAACAATCCTAATCCTAATACCAACTATCTCCCTAATTGAAAACAAAATACTCAAATGGGCCTGTC
+CTTGTAGTATAAACTAATACACCAGTCTTGTAAACCGGAGATGAAAACCTTTTTCCAAGGACAAATCAGA
+GAAAAAGTCTTTAACTCCACCATTAGCACCCAAAGCTAAGATTCTAATTTAAACTATTCTCTGTTCTTTC
+ATGGGGAAGCAGATTTGGGTACCACCCAAGTATTGACTCACCCATCAACAACCGCTATGTATTTCGTACA
+TTACTGCCAGCCACCATGAATATTGTACGGTACCATAAATACTTGACCACCTGTAGTACATAAAAACCCA
+ATCCACATCAAAACCCCCTCCCCATGCTTACAAGCAAGTACAGCAATCAACCCTCAACTATCACACATCA
+ACTGCAACTCCAAAGCCACCCCTCACCCACTAGGATACCAACAAACCTACCCACCCTTAACAGTACATAG
+TACATAAAGCCATTTACCGTACATAGCACATTACAGTCAAATCCCTTCTCGTCCCCATGGATGACCCCCC
+TCAGATAGGGGTCCCTTGACCACCATCCTCCGTGAAATCAATATCCCGCACAAGAGTGCTACTCTCCTCG
+CTCCGGGCCCATAACACTTGGGGGTAGCTAAAGTGAACTGTATCCGACATCTGGTTCCTACTTCAGGGTC
+ATAAAGCCTAAATAGCCCACACGTTCCCCTTAAATAAGACATCACGATG
+
diff -r cd6eb75c9819 -r cc56fc603e53 tool_dependencies.xml
--- a/tool_dependencies.xml	Mon Oct 20 14:56:49 2014 -0400
+++ b/tool_dependencies.xml	Tue Oct 13 12:56:27 2015 -0400
@@ -1,6 +1,6 @@
 <?xml version="1.0"?>
 <tool_dependency>
-    <package name="samtools" version="1.1">
-        <repository changeset_revision="c01b111a243b" name="package_samtools_1_1" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" />
+    <package name="samtools" version="1.2">
+        <repository changeset_revision="192f00129358" name="package_samtools_1_2" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" />
     </package>
 </tool_dependency>