Mercurial > repos > devteam > samtools_stats
comparison test-data/6.stats.expected @ 4:8d500e0e0dbe draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
author | iuc |
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date | Thu, 27 Sep 2018 08:59:54 -0400 |
parents | |
children | ab75c7ea49a5 |
comparison
equal
deleted
inserted
replaced
3:45c568e7f1f9 | 4:8d500e0e0dbe |
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1 # CHK, Checksum [2]Read Names [3]Sequences [4]Qualities | |
2 # CHK, CRC32 of reads which passed filtering followed by addition (32bit overflow) | |
3 CHK 1a1c1362 32507d92 7bab45da | |
4 # Summary Numbers. Use `grep ^SN | cut -f 2-` to extract this part. | |
5 SN raw total sequences: 2 | |
6 SN filtered sequences: 0 | |
7 SN sequences: 2 | |
8 SN is sorted: 1 | |
9 SN 1st fragments: 1 | |
10 SN last fragments: 1 | |
11 SN reads mapped: 2 | |
12 SN reads mapped and paired: 2 # paired-end technology bit set + both mates mapped | |
13 SN reads unmapped: 0 | |
14 SN reads properly paired: 2 # proper-pair bit set | |
15 SN reads paired: 2 # paired-end technology bit set | |
16 SN reads duplicated: 0 # PCR or optical duplicate bit set | |
17 SN reads MQ0: 0 # mapped and MQ=0 | |
18 SN reads QC failed: 0 | |
19 SN non-primary alignments: 0 | |
20 SN total length: 70 # ignores clipping | |
21 SN total first fragment length: 35 # ignores clipping | |
22 SN total last fragment length: 35 # ignores clipping | |
23 SN bases mapped: 70 # ignores clipping | |
24 SN bases mapped (cigar): 70 # more accurate | |
25 SN bases trimmed: 0 | |
26 SN bases duplicated: 0 | |
27 SN mismatches: 0 # from NM fields | |
28 SN error rate: 0.000000e+00 # mismatches / bases mapped (cigar) | |
29 SN average length: 35 | |
30 SN average first fragment length: 35 | |
31 SN average last fragment length: 35 | |
32 SN maximum length: 35 | |
33 SN maximum first fragment length: 35 | |
34 SN maximum last fragment length: 35 | |
35 SN average quality: 255.0 | |
36 SN insert size average: 100.0 | |
37 SN insert size standard deviation: 0.0 | |
38 SN inward oriented pairs: 1 | |
39 SN outward oriented pairs: 0 | |
40 SN pairs with other orientation: 0 | |
41 SN pairs on different chromosomes: 0 | |
42 SN percentage of properly paired reads (%): 100.0 | |
43 # First Fragment Qualities. Use `grep ^FFQ | cut -f 2-` to extract this part. | |
44 # Columns correspond to qualities and rows to cycles. First column is the cycle number. | |
45 FFQ 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 | |
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117 # Mismatches per cycle and quality. Use `grep ^MPC | cut -f 2-` to extract this part. | |
118 # Columns correspond to qualities, rows to cycles. First column is the cycle number, second | |
119 # is the number of N's and the rest is the number of mismatches | |
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131 MPC 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 | |
132 MPC 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 | |
133 MPC 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 | |
134 MPC 15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 | |
135 MPC 16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 | |
136 MPC 17 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 | |
137 MPC 18 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 | |
138 MPC 19 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 | |
139 MPC 20 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 | |
140 MPC 21 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 | |
141 MPC 22 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 | |
142 MPC 23 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 | |
143 MPC 24 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 | |
144 MPC 25 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 | |
145 MPC 26 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 | |
146 MPC 27 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 | |
147 MPC 28 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 | |
148 MPC 29 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 | |
149 MPC 30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 | |
150 MPC 31 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 | |
151 MPC 32 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 | |
152 MPC 33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 | |
153 MPC 34 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 | |
154 MPC 35 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 | |
155 MPC 36 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 | |
156 # GC Content of first fragments. Use `grep ^GCF | cut -f 2-` to extract this part. | |
157 GCF 28.39 0 | |
158 GCF 58.29 1 | |
159 # GC Content of last fragments. Use `grep ^GCL | cut -f 2-` to extract this part. | |
160 GCL 21.36 0 | |
161 GCL 43.97 1 | |
162 # ACGT content per cycle. Use `grep ^GCC | cut -f 2-` to extract this part. The columns are: cycle; A,C,G,T base counts as a percentage of all A/C/G/T bases [%]; and N and O counts as a percentage of all A/C/G/T bases [%] | |
163 GCC 1 0.00 0.00 50.00 50.00 0.00 0.00 | |
164 GCC 2 0.00 0.00 50.00 50.00 0.00 0.00 | |
165 GCC 3 50.00 0.00 50.00 0.00 0.00 0.00 | |
166 GCC 4 0.00 50.00 50.00 0.00 0.00 0.00 | |
167 GCC 5 50.00 0.00 50.00 0.00 0.00 0.00 | |
168 GCC 6 0.00 0.00 100.00 0.00 0.00 0.00 | |
169 GCC 7 50.00 0.00 0.00 50.00 0.00 0.00 | |
170 GCC 8 50.00 0.00 50.00 0.00 0.00 0.00 | |
171 GCC 9 0.00 50.00 0.00 50.00 0.00 0.00 | |
172 GCC 10 0.00 100.00 0.00 0.00 0.00 0.00 | |
173 GCC 11 50.00 0.00 0.00 50.00 0.00 0.00 | |
174 GCC 12 0.00 50.00 0.00 50.00 0.00 0.00 | |
175 GCC 13 50.00 0.00 0.00 50.00 0.00 0.00 | |
176 GCC 14 50.00 0.00 50.00 0.00 0.00 0.00 | |
177 GCC 15 0.00 0.00 0.00 100.00 0.00 0.00 | |
178 GCC 16 100.00 0.00 0.00 0.00 0.00 0.00 | |
179 GCC 17 50.00 50.00 0.00 0.00 0.00 0.00 | |
180 GCC 18 0.00 50.00 0.00 50.00 0.00 0.00 | |
181 GCC 19 0.00 50.00 50.00 0.00 0.00 0.00 | |
182 GCC 20 50.00 50.00 0.00 0.00 0.00 0.00 | |
183 GCC 21 0.00 50.00 50.00 0.00 0.00 0.00 | |
184 GCC 22 0.00 0.00 100.00 0.00 0.00 0.00 | |
185 GCC 23 0.00 0.00 0.00 100.00 0.00 0.00 | |
186 GCC 24 0.00 0.00 0.00 100.00 0.00 0.00 | |
187 GCC 25 0.00 0.00 50.00 50.00 0.00 0.00 | |
188 GCC 26 0.00 50.00 50.00 0.00 0.00 0.00 | |
189 GCC 27 50.00 0.00 50.00 0.00 0.00 0.00 | |
190 GCC 28 100.00 0.00 0.00 0.00 0.00 0.00 | |
191 GCC 29 0.00 0.00 100.00 0.00 0.00 0.00 | |
192 GCC 30 50.00 0.00 0.00 50.00 0.00 0.00 | |
193 GCC 31 0.00 100.00 0.00 0.00 0.00 0.00 | |
194 GCC 32 0.00 100.00 0.00 0.00 0.00 0.00 | |
195 GCC 33 0.00 0.00 50.00 50.00 0.00 0.00 | |
196 GCC 34 100.00 0.00 0.00 0.00 0.00 0.00 | |
197 GCC 35 0.00 0.00 50.00 50.00 0.00 0.00 | |
198 # ACGT content per cycle for first fragments. Use `grep ^FBC | cut -f 2-` to extract this part. The columns are: cycle; A,C,G,T base counts as a percentage of all A/C/G/T bases [%]; and N and O counts as a percentage of all A/C/G/T bases [%] | |
199 FBC 1 0.00 0.00 0.00 100.00 0.00 0.00 | |
200 FBC 2 0.00 0.00 100.00 0.00 0.00 0.00 | |
201 FBC 3 0.00 0.00 100.00 0.00 0.00 0.00 | |
202 FBC 4 0.00 0.00 100.00 0.00 0.00 0.00 | |
203 FBC 5 0.00 0.00 100.00 0.00 0.00 0.00 | |
204 FBC 6 0.00 0.00 100.00 0.00 0.00 0.00 | |
205 FBC 7 0.00 0.00 0.00 100.00 0.00 0.00 | |
206 FBC 8 0.00 0.00 100.00 0.00 0.00 0.00 | |
207 FBC 9 0.00 0.00 0.00 100.00 0.00 0.00 | |
208 FBC 10 0.00 100.00 0.00 0.00 0.00 0.00 | |
209 FBC 11 100.00 0.00 0.00 0.00 0.00 0.00 | |
210 FBC 12 0.00 0.00 0.00 100.00 0.00 0.00 | |
211 FBC 13 100.00 0.00 0.00 0.00 0.00 0.00 | |
212 FBC 14 0.00 0.00 100.00 0.00 0.00 0.00 | |
213 FBC 15 0.00 0.00 0.00 100.00 0.00 0.00 | |
214 FBC 16 100.00 0.00 0.00 0.00 0.00 0.00 | |
215 FBC 17 100.00 0.00 0.00 0.00 0.00 0.00 | |
216 FBC 18 0.00 0.00 0.00 100.00 0.00 0.00 | |
217 FBC 19 0.00 100.00 0.00 0.00 0.00 0.00 | |
218 FBC 20 0.00 100.00 0.00 0.00 0.00 0.00 | |
219 FBC 21 0.00 0.00 100.00 0.00 0.00 0.00 | |
220 FBC 22 0.00 0.00 100.00 0.00 0.00 0.00 | |
221 FBC 23 0.00 0.00 0.00 100.00 0.00 0.00 | |
222 FBC 24 0.00 0.00 0.00 100.00 0.00 0.00 | |
223 FBC 25 0.00 0.00 100.00 0.00 0.00 0.00 | |
224 FBC 26 0.00 0.00 100.00 0.00 0.00 0.00 | |
225 FBC 27 0.00 0.00 100.00 0.00 0.00 0.00 | |
226 FBC 28 100.00 0.00 0.00 0.00 0.00 0.00 | |
227 FBC 29 0.00 0.00 100.00 0.00 0.00 0.00 | |
228 FBC 30 0.00 0.00 0.00 100.00 0.00 0.00 | |
229 FBC 31 0.00 100.00 0.00 0.00 0.00 0.00 | |
230 FBC 32 0.00 100.00 0.00 0.00 0.00 0.00 | |
231 FBC 33 0.00 0.00 100.00 0.00 0.00 0.00 | |
232 FBC 34 100.00 0.00 0.00 0.00 0.00 0.00 | |
233 FBC 35 0.00 0.00 100.00 0.00 0.00 0.00 | |
234 # ACGT content per cycle for last fragments. Use `grep ^LBC | cut -f 2-` to extract this part. The columns are: cycle; A,C,G,T base counts as a percentage of all A/C/G/T bases [%]; and N and O counts as a percentage of all A/C/G/T bases [%] | |
235 LBC 1 0.00 0.00 100.00 0.00 0.00 0.00 | |
236 LBC 2 0.00 0.00 0.00 100.00 0.00 0.00 | |
237 LBC 3 100.00 0.00 0.00 0.00 0.00 0.00 | |
238 LBC 4 0.00 100.00 0.00 0.00 0.00 0.00 | |
239 LBC 5 100.00 0.00 0.00 0.00 0.00 0.00 | |
240 LBC 6 0.00 0.00 100.00 0.00 0.00 0.00 | |
241 LBC 7 100.00 0.00 0.00 0.00 0.00 0.00 | |
242 LBC 8 100.00 0.00 0.00 0.00 0.00 0.00 | |
243 LBC 9 0.00 100.00 0.00 0.00 0.00 0.00 | |
244 LBC 10 0.00 100.00 0.00 0.00 0.00 0.00 | |
245 LBC 11 0.00 0.00 0.00 100.00 0.00 0.00 | |
246 LBC 12 0.00 100.00 0.00 0.00 0.00 0.00 | |
247 LBC 13 0.00 0.00 0.00 100.00 0.00 0.00 | |
248 LBC 14 100.00 0.00 0.00 0.00 0.00 0.00 | |
249 LBC 15 0.00 0.00 0.00 100.00 0.00 0.00 | |
250 LBC 16 100.00 0.00 0.00 0.00 0.00 0.00 | |
251 LBC 17 0.00 100.00 0.00 0.00 0.00 0.00 | |
252 LBC 18 0.00 100.00 0.00 0.00 0.00 0.00 | |
253 LBC 19 0.00 0.00 100.00 0.00 0.00 0.00 | |
254 LBC 20 100.00 0.00 0.00 0.00 0.00 0.00 | |
255 LBC 21 0.00 100.00 0.00 0.00 0.00 0.00 | |
256 LBC 22 0.00 0.00 100.00 0.00 0.00 0.00 | |
257 LBC 23 0.00 0.00 0.00 100.00 0.00 0.00 | |
258 LBC 24 0.00 0.00 0.00 100.00 0.00 0.00 | |
259 LBC 25 0.00 0.00 0.00 100.00 0.00 0.00 | |
260 LBC 26 0.00 100.00 0.00 0.00 0.00 0.00 | |
261 LBC 27 100.00 0.00 0.00 0.00 0.00 0.00 | |
262 LBC 28 100.00 0.00 0.00 0.00 0.00 0.00 | |
263 LBC 29 0.00 0.00 100.00 0.00 0.00 0.00 | |
264 LBC 30 100.00 0.00 0.00 0.00 0.00 0.00 | |
265 LBC 31 0.00 100.00 0.00 0.00 0.00 0.00 | |
266 LBC 32 0.00 100.00 0.00 0.00 0.00 0.00 | |
267 LBC 33 0.00 0.00 0.00 100.00 0.00 0.00 | |
268 LBC 34 100.00 0.00 0.00 0.00 0.00 0.00 | |
269 LBC 35 0.00 0.00 0.00 100.00 0.00 0.00 | |
270 # Insert sizes. Use `grep ^IS | cut -f 2-` to extract this part. The columns are: insert size, pairs total, inward oriented pairs, outward oriented pairs, other pairs | |
271 IS 0 0 0 0 0 | |
272 IS 1 0 0 0 0 | |
273 IS 2 0 0 0 0 | |
274 IS 3 0 0 0 0 | |
275 IS 4 0 0 0 0 | |
276 IS 5 0 0 0 0 | |
277 IS 6 0 0 0 0 | |
278 IS 7 0 0 0 0 | |
279 IS 8 0 0 0 0 | |
280 IS 9 0 0 0 0 | |
281 IS 10 0 0 0 0 | |
282 IS 11 0 0 0 0 | |
283 IS 12 0 0 0 0 | |
284 IS 13 0 0 0 0 | |
285 IS 14 0 0 0 0 | |
286 IS 15 0 0 0 0 | |
287 IS 16 0 0 0 0 | |
288 IS 17 0 0 0 0 | |
289 IS 18 0 0 0 0 | |
290 IS 19 0 0 0 0 | |
291 IS 20 0 0 0 0 | |
292 IS 21 0 0 0 0 | |
293 IS 22 0 0 0 0 | |
294 IS 23 0 0 0 0 | |
295 IS 24 0 0 0 0 | |
296 IS 25 0 0 0 0 | |
297 IS 26 0 0 0 0 | |
298 IS 27 0 0 0 0 | |
299 IS 28 0 0 0 0 | |
300 IS 29 0 0 0 0 | |
301 IS 30 0 0 0 0 | |
302 IS 31 0 0 0 0 | |
303 IS 32 0 0 0 0 | |
304 IS 33 0 0 0 0 | |
305 IS 34 0 0 0 0 | |
306 IS 35 0 0 0 0 | |
307 IS 36 0 0 0 0 | |
308 IS 37 0 0 0 0 | |
309 IS 38 0 0 0 0 | |
310 IS 39 0 0 0 0 | |
311 IS 40 0 0 0 0 | |
312 IS 41 0 0 0 0 | |
313 IS 42 0 0 0 0 | |
314 IS 43 0 0 0 0 | |
315 IS 44 0 0 0 0 | |
316 IS 45 0 0 0 0 | |
317 IS 46 0 0 0 0 | |
318 IS 47 0 0 0 0 | |
319 IS 48 0 0 0 0 | |
320 IS 49 0 0 0 0 | |
321 IS 50 0 0 0 0 | |
322 IS 51 0 0 0 0 | |
323 IS 52 0 0 0 0 | |
324 IS 53 0 0 0 0 | |
325 IS 54 0 0 0 0 | |
326 IS 55 0 0 0 0 | |
327 IS 56 0 0 0 0 | |
328 IS 57 0 0 0 0 | |
329 IS 58 0 0 0 0 | |
330 IS 59 0 0 0 0 | |
331 IS 60 0 0 0 0 | |
332 IS 61 0 0 0 0 | |
333 IS 62 0 0 0 0 | |
334 IS 63 0 0 0 0 | |
335 IS 64 0 0 0 0 | |
336 IS 65 0 0 0 0 | |
337 IS 66 0 0 0 0 | |
338 IS 67 0 0 0 0 | |
339 IS 68 0 0 0 0 | |
340 IS 69 0 0 0 0 | |
341 IS 70 0 0 0 0 | |
342 IS 71 0 0 0 0 | |
343 IS 72 0 0 0 0 | |
344 IS 73 0 0 0 0 | |
345 IS 74 0 0 0 0 | |
346 IS 75 0 0 0 0 | |
347 IS 76 0 0 0 0 | |
348 IS 77 0 0 0 0 | |
349 IS 78 0 0 0 0 | |
350 IS 79 0 0 0 0 | |
351 IS 80 0 0 0 0 | |
352 IS 81 0 0 0 0 | |
353 IS 82 0 0 0 0 | |
354 IS 83 0 0 0 0 | |
355 IS 84 0 0 0 0 | |
356 IS 85 0 0 0 0 | |
357 IS 86 0 0 0 0 | |
358 IS 87 0 0 0 0 | |
359 IS 88 0 0 0 0 | |
360 IS 89 0 0 0 0 | |
361 IS 90 0 0 0 0 | |
362 IS 91 0 0 0 0 | |
363 IS 92 0 0 0 0 | |
364 IS 93 0 0 0 0 | |
365 IS 94 0 0 0 0 | |
366 IS 95 0 0 0 0 | |
367 IS 96 0 0 0 0 | |
368 IS 97 0 0 0 0 | |
369 IS 98 0 0 0 0 | |
370 IS 99 0 0 0 0 | |
371 IS 100 1 1 0 0 | |
372 # Read lengths. Use `grep ^RL | cut -f 2-` to extract this part. The columns are: read length, count | |
373 RL 35 2 | |
374 # Read lengths - first fragments. Use `grep ^FRL | cut -f 2-` to extract this part. The columns are: read length, count | |
375 FRL 35 1 | |
376 # Read lengths - last fragments. Use `grep ^LRL | cut -f 2-` to extract this part. The columns are: read length, count | |
377 LRL 35 1 | |
378 # Indel distribution. Use `grep ^ID | cut -f 2-` to extract this part. The columns are: length, number of insertions, number of deletions | |
379 ID 1 1 0 | |
380 # Indels per cycle. Use `grep ^IC | cut -f 2-` to extract this part. The columns are: cycle, number of insertions (fwd), .. (rev) , number of deletions (fwd), .. (rev) | |
381 IC 2 1 0 0 0 | |
382 # Coverage distribution. Use `grep ^COV | cut -f 2-` to extract this part. | |
383 COV [1-1] 1 69 | |
384 # GC-depth. Use `grep ^GCD | cut -f 2-` to extract this part. The columns are: GC%, unique sequence percentiles, 10th, 25th, 50th, 75th and 90th depth percentile | |
385 GCD 0.0 100.000 0.000 0.000 0.000 0.000 0.000 |