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annotate test-data/12.2reads.overlap.expected @ 12:8fecc86e574a draft default tip

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 9c5a35ce695c3d134e41d8695487edd5f71ea33c
author iuc
date Sun, 08 Sep 2024 03:23:56 +0000
parents ab75c7ea49a5
children
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8fecc86e574a planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 9c5a35ce695c3d134e41d8695487edd5f71ea33c
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1 # This file was produced by samtools stats (1.20+htslib-1.20) and can be plotted using plot-bamstats
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ab75c7ea49a5 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 0f75269223c0821c6c82acf98fde947d0f816f2b"
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2 # This file contains statistics for all reads.
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8fecc86e574a planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 9c5a35ce695c3d134e41d8695487edd5f71ea33c
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3 # The command line was: stats -t /tmp/tmp5q_kwqc0/files/4/0/f/dataset_40fb1106-2fe0-491f-8790-2139e9b1b3bd.dat -@ 0 infile
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8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
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4 # CHK, Checksum [2]Read Names [3]Sequences [4]Qualities
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
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5 # CHK, CRC32 of reads which passed filtering followed by addition (32bit overflow)
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
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6 CHK 5b31676a b0edee94 471895da
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
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7 # Summary Numbers. Use `grep ^SN | cut -f 2-` to extract this part.
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ab75c7ea49a5 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 0f75269223c0821c6c82acf98fde947d0f816f2b"
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8 SN raw total sequences: 2 # excluding supplementary and secondary reads
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8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
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9 SN filtered sequences: 0
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
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10 SN sequences: 2
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
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11 SN is sorted: 1
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
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12 SN 1st fragments: 1
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
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13 SN last fragments: 1
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
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14 SN reads mapped: 2
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
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15 SN reads mapped and paired: 2 # paired-end technology bit set + both mates mapped
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
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16 SN reads unmapped: 0
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
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17 SN reads properly paired: 2 # proper-pair bit set
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
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18 SN reads paired: 2 # paired-end technology bit set
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
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19 SN reads duplicated: 0 # PCR or optical duplicate bit set
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
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20 SN reads MQ0: 0 # mapped and MQ=0
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
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21 SN reads QC failed: 0
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
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22 SN non-primary alignments: 0
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ab75c7ea49a5 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 0f75269223c0821c6c82acf98fde947d0f816f2b"
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23 SN supplementary alignments: 0
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8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
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24 SN total length: 200 # ignores clipping
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
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25 SN total first fragment length: 100 # ignores clipping
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
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26 SN total last fragment length: 100 # ignores clipping
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
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27 SN bases mapped: 200 # ignores clipping
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
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28 SN bases mapped (cigar): 199 # more accurate
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
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29 SN bases trimmed: 0
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
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30 SN bases duplicated: 0
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
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31 SN mismatches: 6 # from NM fields
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
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32 SN error rate: 3.015075e-02 # mismatches / bases mapped (cigar)
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
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33 SN average length: 100
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
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34 SN average first fragment length: 100
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
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35 SN average last fragment length: 100
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
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36 SN maximum length: 100
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
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37 SN maximum first fragment length: 100
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
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38 SN maximum last fragment length: 100
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39 SN average quality: 36.2
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
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40 SN insert size average: 165.0
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
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41 SN insert size standard deviation: 0.0
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
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42 SN inward oriented pairs: 1
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
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43 SN outward oriented pairs: 0
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
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44 SN pairs with other orientation: 0
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
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45 SN pairs on different chromosomes: 0
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46 SN percentage of properly paired reads (%): 100.0
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47 SN bases inside the target: 166
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
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48 SN percentage of target genome with coverage > 0 (%): 99.40
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
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49 # First Fragment Qualities. Use `grep ^FFQ | cut -f 2-` to extract this part.
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
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50 # Columns correspond to qualities and rows to cycles. First column is the cycle number.
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
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51 FFQ 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
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52 FFQ 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
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53 FFQ 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
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54 FFQ 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
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55 FFQ 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
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56 FFQ 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
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57 FFQ 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
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58 FFQ 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
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59 FFQ 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
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60 FFQ 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
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61 FFQ 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
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62 FFQ 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
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63 FFQ 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
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64 FFQ 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
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65 FFQ 15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
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66 FFQ 16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
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67 FFQ 17 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
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68 FFQ 18 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
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69 FFQ 19 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
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70 FFQ 20 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
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249 LFQ 97 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
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250 LFQ 98 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
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251 LFQ 99 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
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252 LFQ 100 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
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253 # GC Content of first fragments. Use `grep ^GCF | cut -f 2-` to extract this part.
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
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254 GCF 17.34 0
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
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255 GCF 35.18 1
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
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256 # GC Content of last fragments. Use `grep ^GCL | cut -f 2-` to extract this part.
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
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257 GCL 21.36 0
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
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258 GCL 43.22 1
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
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259 # ACGT content per cycle. Use `grep ^GCC | cut -f 2-` to extract this part. The columns are: cycle; A,C,G,T base counts as a percentage of all A/C/G/T bases [%]; and N and O counts as a percentage of all A/C/G/T bases [%]
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
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diff changeset
260 GCC 1 0.00 0.00 50.00 50.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
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diff changeset
261 GCC 2 0.00 0.00 100.00 0.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
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diff changeset
262 GCC 3 50.00 50.00 0.00 0.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
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diff changeset
263 GCC 4 0.00 0.00 100.00 0.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
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diff changeset
264 GCC 5 50.00 0.00 50.00 0.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
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diff changeset
265 GCC 6 0.00 50.00 0.00 50.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
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diff changeset
266 GCC 7 0.00 0.00 50.00 50.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
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diff changeset
267 GCC 8 50.00 0.00 50.00 0.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
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268 GCC 9 50.00 50.00 0.00 0.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
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diff changeset
269 GCC 10 50.00 50.00 0.00 0.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
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diff changeset
270 GCC 11 0.00 50.00 50.00 0.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
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diff changeset
271 GCC 12 0.00 0.00 0.00 100.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
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diff changeset
272 GCC 13 0.00 0.00 100.00 0.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
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diff changeset
273 GCC 14 100.00 0.00 0.00 0.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
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diff changeset
274 GCC 15 50.00 0.00 50.00 0.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
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diff changeset
275 GCC 16 0.00 100.00 0.00 0.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
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diff changeset
276 GCC 17 50.00 50.00 0.00 0.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
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diff changeset
277 GCC 18 50.00 0.00 0.00 50.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
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diff changeset
278 GCC 19 100.00 0.00 0.00 0.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
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diff changeset
279 GCC 20 0.00 0.00 100.00 0.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
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diff changeset
280 GCC 21 100.00 0.00 0.00 0.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
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diff changeset
281 GCC 22 0.00 0.00 50.00 50.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
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diff changeset
282 GCC 23 50.00 0.00 0.00 50.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
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diff changeset
283 GCC 24 0.00 0.00 100.00 0.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
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diff changeset
284 GCC 25 50.00 0.00 0.00 50.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
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diff changeset
285 GCC 26 50.00 0.00 50.00 0.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
286 GCC 27 0.00 50.00 50.00 0.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
287 GCC 28 50.00 0.00 0.00 50.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
288 GCC 29 50.00 50.00 0.00 0.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
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diff changeset
289 GCC 30 50.00 50.00 0.00 0.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
290 GCC 31 0.00 0.00 50.00 50.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
291 GCC 32 50.00 0.00 50.00 0.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
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diff changeset
292 GCC 33 50.00 50.00 0.00 0.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
293 GCC 34 100.00 0.00 0.00 0.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
294 GCC 35 0.00 0.00 50.00 50.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
295 GCC 36 0.00 50.00 50.00 0.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
296 GCC 37 50.00 50.00 0.00 0.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
297 GCC 38 0.00 50.00 0.00 50.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
298 GCC 39 50.00 0.00 0.00 50.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
299 GCC 40 0.00 50.00 50.00 0.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
300 GCC 41 50.00 50.00 0.00 0.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
301 GCC 42 0.00 50.00 0.00 50.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
302 GCC 43 0.00 50.00 0.00 50.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
303 GCC 44 0.00 0.00 50.00 50.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
304 GCC 45 50.00 50.00 0.00 0.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
305 GCC 46 0.00 0.00 50.00 50.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
306 GCC 47 50.00 50.00 0.00 0.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
307 GCC 48 0.00 100.00 0.00 0.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
308 GCC 49 0.00 0.00 0.00 100.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
309 GCC 50 50.00 0.00 50.00 0.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
310 GCC 51 0.00 50.00 50.00 0.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
311 GCC 52 0.00 0.00 50.00 50.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
312 GCC 53 0.00 0.00 50.00 50.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
313 GCC 54 0.00 0.00 50.00 50.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
314 GCC 55 100.00 0.00 0.00 0.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
315 GCC 56 0.00 100.00 0.00 0.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
316 GCC 57 50.00 0.00 0.00 50.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
317 GCC 58 0.00 0.00 50.00 50.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
318 GCC 59 50.00 0.00 0.00 50.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
319 GCC 60 0.00 0.00 50.00 50.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
320 GCC 61 50.00 0.00 0.00 50.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
321 GCC 62 0.00 0.00 100.00 0.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
322 GCC 63 100.00 0.00 0.00 0.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
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323 GCC 64 0.00 50.00 50.00 0.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
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324 GCC 65 50.00 0.00 50.00 0.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
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325 GCC 66 50.00 50.00 0.00 0.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
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326 GCC 67 50.00 0.00 0.00 50.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
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327 GCC 68 50.00 50.00 0.00 0.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
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328 GCC 69 50.00 50.00 0.00 0.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
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329 GCC 70 100.00 0.00 0.00 0.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
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330 GCC 71 50.00 0.00 0.00 50.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
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331 GCC 72 50.00 50.00 0.00 0.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
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332 GCC 73 50.00 0.00 0.00 50.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
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333 GCC 74 50.00 50.00 0.00 0.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
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334 GCC 75 100.00 0.00 0.00 0.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
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335 GCC 76 50.00 50.00 0.00 0.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
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336 GCC 77 100.00 0.00 0.00 0.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
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337 GCC 78 100.00 0.00 0.00 0.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
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338 GCC 79 100.00 0.00 0.00 0.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
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339 GCC 80 100.00 0.00 0.00 0.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
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340 GCC 81 100.00 0.00 0.00 0.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
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341 GCC 82 100.00 0.00 0.00 0.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
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342 GCC 83 100.00 0.00 0.00 0.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
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343 GCC 84 100.00 0.00 0.00 0.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
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344 GCC 85 100.00 0.00 0.00 0.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
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345 GCC 86 100.00 0.00 0.00 0.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
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346 GCC 87 100.00 0.00 0.00 0.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
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347 GCC 88 100.00 0.00 0.00 0.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
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348 GCC 89 100.00 0.00 0.00 0.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
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349 GCC 90 100.00 0.00 0.00 0.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
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350 GCC 91 50.00 50.00 0.00 0.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
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351 GCC 92 50.00 50.00 0.00 0.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
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352 GCC 93 50.00 50.00 0.00 0.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
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353 GCC 94 100.00 0.00 0.00 0.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
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354 GCC 95 50.00 50.00 0.00 0.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
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355 GCC 96 50.00 50.00 0.00 0.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
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356 GCC 97 50.00 50.00 0.00 0.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
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357 GCC 98 50.00 50.00 0.00 0.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
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358 GCC 99 50.00 50.00 0.00 0.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
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359 GCC 100 100.00 0.00 0.00 0.00 0.00 0.00
9
ab75c7ea49a5 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 0f75269223c0821c6c82acf98fde947d0f816f2b"
iuc
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diff changeset
360 # ACGT content per cycle, read oriented. Use `grep ^GCT | cut -f 2-` to extract this part. The columns are: cycle; A,C,G,T base counts as a percentage of all A/C/G/T bases [%]
ab75c7ea49a5 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 0f75269223c0821c6c82acf98fde947d0f816f2b"
iuc
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diff changeset
361 GCT 1 50.00 0.00 50.00 0.00
ab75c7ea49a5 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 0f75269223c0821c6c82acf98fde947d0f816f2b"
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362 GCT 2 0.00 50.00 50.00 0.00
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iuc
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363 GCT 3 0.00 50.00 0.00 50.00
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364 GCT 4 0.00 50.00 50.00 0.00
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366 GCT 6 0.00 0.00 50.00 50.00
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368 GCT 8 0.00 0.00 50.00 50.00
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369 GCT 9 0.00 50.00 0.00 50.00
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371 GCT 11 0.00 0.00 100.00 0.00
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372 GCT 12 50.00 0.00 0.00 50.00
ab75c7ea49a5 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 0f75269223c0821c6c82acf98fde947d0f816f2b"
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373 GCT 13 0.00 50.00 50.00 0.00
ab75c7ea49a5 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 0f75269223c0821c6c82acf98fde947d0f816f2b"
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374 GCT 14 50.00 0.00 0.00 50.00
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ab75c7ea49a5 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 0f75269223c0821c6c82acf98fde947d0f816f2b"
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378 GCT 18 100.00 0.00 0.00 0.00
ab75c7ea49a5 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 0f75269223c0821c6c82acf98fde947d0f816f2b"
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379 GCT 19 50.00 0.00 0.00 50.00
ab75c7ea49a5 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 0f75269223c0821c6c82acf98fde947d0f816f2b"
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380 GCT 20 0.00 50.00 50.00 0.00
ab75c7ea49a5 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 0f75269223c0821c6c82acf98fde947d0f816f2b"
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ab75c7ea49a5 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 0f75269223c0821c6c82acf98fde947d0f816f2b"
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ab75c7ea49a5 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 0f75269223c0821c6c82acf98fde947d0f816f2b"
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ab75c7ea49a5 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 0f75269223c0821c6c82acf98fde947d0f816f2b"
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ab75c7ea49a5 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 0f75269223c0821c6c82acf98fde947d0f816f2b"
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387 GCT 27 0.00 100.00 0.00 0.00
ab75c7ea49a5 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 0f75269223c0821c6c82acf98fde947d0f816f2b"
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ab75c7ea49a5 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 0f75269223c0821c6c82acf98fde947d0f816f2b"
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461 # ACGT content per cycle for first fragments. Use `grep ^FBC | cut -f 2-` to extract this part. The columns are: cycle; A,C,G,T base counts as a percentage of all A/C/G/T bases [%]; and N and O counts as a percentage of all A/C/G/T bases [%]
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8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
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473 FBC 12 0.00 0.00 0.00 100.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
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8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
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475 FBC 14 100.00 0.00 0.00 0.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
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476 FBC 15 100.00 0.00 0.00 0.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
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477 FBC 16 0.00 100.00 0.00 0.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
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478 FBC 17 100.00 0.00 0.00 0.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
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479 FBC 18 0.00 0.00 0.00 100.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
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480 FBC 19 100.00 0.00 0.00 0.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
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481 FBC 20 0.00 0.00 100.00 0.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
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482 FBC 21 100.00 0.00 0.00 0.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
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483 FBC 22 0.00 0.00 100.00 0.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
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484 FBC 23 100.00 0.00 0.00 0.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
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485 FBC 24 0.00 0.00 100.00 0.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
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486 FBC 25 100.00 0.00 0.00 0.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
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487 FBC 26 100.00 0.00 0.00 0.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
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488 FBC 27 0.00 0.00 100.00 0.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
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489 FBC 28 100.00 0.00 0.00 0.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
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490 FBC 29 0.00 100.00 0.00 0.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
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491 FBC 30 100.00 0.00 0.00 0.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
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492 FBC 31 0.00 0.00 100.00 0.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
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493 FBC 32 100.00 0.00 0.00 0.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
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494 FBC 33 100.00 0.00 0.00 0.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
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495 FBC 34 100.00 0.00 0.00 0.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
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496 FBC 35 0.00 0.00 100.00 0.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
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497 FBC 36 0.00 0.00 100.00 0.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
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498 FBC 37 100.00 0.00 0.00 0.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
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499 FBC 38 0.00 0.00 0.00 100.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
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500 FBC 39 0.00 0.00 0.00 100.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
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501 FBC 40 0.00 100.00 0.00 0.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
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502 FBC 41 100.00 0.00 0.00 0.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
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503 FBC 42 0.00 0.00 0.00 100.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
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504 FBC 43 0.00 100.00 0.00 0.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
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505 FBC 44 0.00 0.00 0.00 100.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
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506 FBC 45 0.00 100.00 0.00 0.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
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507 FBC 46 0.00 0.00 0.00 100.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
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508 FBC 47 0.00 100.00 0.00 0.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
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509 FBC 48 0.00 100.00 0.00 0.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
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510 FBC 49 0.00 0.00 0.00 100.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
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511 FBC 50 100.00 0.00 0.00 0.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
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512 FBC 51 0.00 100.00 0.00 0.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
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513 FBC 52 0.00 0.00 0.00 100.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
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514 FBC 53 0.00 0.00 100.00 0.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
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515 FBC 54 0.00 0.00 0.00 100.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
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516 FBC 55 100.00 0.00 0.00 0.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
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517 FBC 56 0.00 100.00 0.00 0.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
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518 FBC 57 0.00 0.00 0.00 100.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
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519 FBC 58 0.00 0.00 0.00 100.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
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520 FBC 59 0.00 0.00 0.00 100.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
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521 FBC 60 0.00 0.00 0.00 100.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
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522 FBC 61 100.00 0.00 0.00 0.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
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523 FBC 62 0.00 0.00 100.00 0.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
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524 FBC 63 100.00 0.00 0.00 0.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
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525 FBC 64 0.00 100.00 0.00 0.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
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526 FBC 65 0.00 0.00 100.00 0.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
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527 FBC 66 100.00 0.00 0.00 0.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
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528 FBC 67 100.00 0.00 0.00 0.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
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529 FBC 68 100.00 0.00 0.00 0.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
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530 FBC 69 100.00 0.00 0.00 0.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
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531 FBC 70 100.00 0.00 0.00 0.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
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532 FBC 71 100.00 0.00 0.00 0.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
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533 FBC 72 100.00 0.00 0.00 0.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
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534 FBC 73 100.00 0.00 0.00 0.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
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535 FBC 74 100.00 0.00 0.00 0.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
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536 FBC 75 100.00 0.00 0.00 0.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
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537 FBC 76 100.00 0.00 0.00 0.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
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538 FBC 77 100.00 0.00 0.00 0.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
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539 FBC 78 100.00 0.00 0.00 0.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
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540 FBC 79 100.00 0.00 0.00 0.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
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541 FBC 80 100.00 0.00 0.00 0.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
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542 FBC 81 100.00 0.00 0.00 0.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
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543 FBC 82 100.00 0.00 0.00 0.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
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544 FBC 83 100.00 0.00 0.00 0.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
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545 FBC 84 100.00 0.00 0.00 0.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
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diff changeset
546 FBC 85 100.00 0.00 0.00 0.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
547 FBC 86 100.00 0.00 0.00 0.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
548 FBC 87 100.00 0.00 0.00 0.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
549 FBC 88 100.00 0.00 0.00 0.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
550 FBC 89 100.00 0.00 0.00 0.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
551 FBC 90 100.00 0.00 0.00 0.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
552 FBC 91 0.00 100.00 0.00 0.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
553 FBC 92 0.00 100.00 0.00 0.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
554 FBC 93 0.00 100.00 0.00 0.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
555 FBC 94 100.00 0.00 0.00 0.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
556 FBC 95 0.00 100.00 0.00 0.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
557 FBC 96 0.00 100.00 0.00 0.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
558 FBC 97 0.00 100.00 0.00 0.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
559 FBC 98 0.00 100.00 0.00 0.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
560 FBC 99 0.00 100.00 0.00 0.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
561 FBC 100 100.00 0.00 0.00 0.00 0.00 0.00
9
ab75c7ea49a5 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 0f75269223c0821c6c82acf98fde947d0f816f2b"
iuc
parents: 4
diff changeset
562 # ACGT raw counters for first fragments. Use `grep ^FTC | cut -f 2-` to extract this part. The columns are: A,C,G,T,N base counters
ab75c7ea49a5 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 0f75269223c0821c6c82acf98fde947d0f816f2b"
iuc
parents: 4
diff changeset
563 FTC 50 21 14 15 0
4
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
564 # ACGT content per cycle for last fragments. Use `grep ^LBC | cut -f 2-` to extract this part. The columns are: cycle; A,C,G,T base counts as a percentage of all A/C/G/T bases [%]; and N and O counts as a percentage of all A/C/G/T bases [%]
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
565 LBC 1 0.00 0.00 100.00 0.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
566 LBC 2 0.00 0.00 100.00 0.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
567 LBC 3 0.00 100.00 0.00 0.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
568 LBC 4 0.00 0.00 100.00 0.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
569 LBC 5 0.00 0.00 100.00 0.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
570 LBC 6 0.00 0.00 0.00 100.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
571 LBC 7 0.00 0.00 0.00 100.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
572 LBC 8 0.00 0.00 100.00 0.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
573 LBC 9 0.00 100.00 0.00 0.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
574 LBC 10 100.00 0.00 0.00 0.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
575 LBC 11 0.00 0.00 100.00 0.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
576 LBC 12 0.00 0.00 0.00 100.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
577 LBC 13 0.00 0.00 100.00 0.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
578 LBC 14 100.00 0.00 0.00 0.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
579 LBC 15 0.00 0.00 100.00 0.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
580 LBC 16 0.00 100.00 0.00 0.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
581 LBC 17 0.00 100.00 0.00 0.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
582 LBC 18 100.00 0.00 0.00 0.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
583 LBC 19 100.00 0.00 0.00 0.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
584 LBC 20 0.00 0.00 100.00 0.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
585 LBC 21 100.00 0.00 0.00 0.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
586 LBC 22 0.00 0.00 0.00 100.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
587 LBC 23 0.00 0.00 0.00 100.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
588 LBC 24 0.00 0.00 100.00 0.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
589 LBC 25 0.00 0.00 0.00 100.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
590 LBC 26 0.00 0.00 100.00 0.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
591 LBC 27 0.00 100.00 0.00 0.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
592 LBC 28 0.00 0.00 0.00 100.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
593 LBC 29 100.00 0.00 0.00 0.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
594 LBC 30 0.00 100.00 0.00 0.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
595 LBC 31 0.00 0.00 0.00 100.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
596 LBC 32 0.00 0.00 100.00 0.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
597 LBC 33 0.00 100.00 0.00 0.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
598 LBC 34 100.00 0.00 0.00 0.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
599 LBC 35 0.00 0.00 0.00 100.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
600 LBC 36 0.00 100.00 0.00 0.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
601 LBC 37 0.00 100.00 0.00 0.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
602 LBC 38 0.00 100.00 0.00 0.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
603 LBC 39 100.00 0.00 0.00 0.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
604 LBC 40 0.00 0.00 100.00 0.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
605 LBC 41 0.00 100.00 0.00 0.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
606 LBC 42 0.00 100.00 0.00 0.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
607 LBC 43 0.00 0.00 0.00 100.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
608 LBC 44 0.00 0.00 100.00 0.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
609 LBC 45 100.00 0.00 0.00 0.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
610 LBC 46 0.00 0.00 100.00 0.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
611 LBC 47 100.00 0.00 0.00 0.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
612 LBC 48 0.00 100.00 0.00 0.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
613 LBC 49 0.00 0.00 0.00 100.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
614 LBC 50 0.00 0.00 100.00 0.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
615 LBC 51 0.00 0.00 100.00 0.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
616 LBC 52 0.00 0.00 100.00 0.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
617 LBC 53 0.00 0.00 0.00 100.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
618 LBC 54 0.00 0.00 100.00 0.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
619 LBC 55 100.00 0.00 0.00 0.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
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620 LBC 56 0.00 100.00 0.00 0.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
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621 LBC 57 100.00 0.00 0.00 0.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
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622 LBC 58 0.00 0.00 100.00 0.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
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623 LBC 59 100.00 0.00 0.00 0.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
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diff changeset
624 LBC 60 0.00 0.00 100.00 0.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
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diff changeset
625 LBC 61 0.00 0.00 0.00 100.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
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diff changeset
626 LBC 62 0.00 0.00 100.00 0.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
627 LBC 63 100.00 0.00 0.00 0.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
628 LBC 64 0.00 0.00 100.00 0.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
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629 LBC 65 100.00 0.00 0.00 0.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
630 LBC 66 0.00 100.00 0.00 0.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
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631 LBC 67 0.00 0.00 0.00 100.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
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diff changeset
632 LBC 68 0.00 100.00 0.00 0.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
633 LBC 69 0.00 100.00 0.00 0.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
634 LBC 70 100.00 0.00 0.00 0.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
635 LBC 71 0.00 0.00 0.00 100.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
636 LBC 72 0.00 100.00 0.00 0.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
637 LBC 73 0.00 0.00 0.00 100.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
638 LBC 74 0.00 100.00 0.00 0.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
639 LBC 75 100.00 0.00 0.00 0.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
640 LBC 76 0.00 100.00 0.00 0.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
641 LBC 77 100.00 0.00 0.00 0.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
642 LBC 78 100.00 0.00 0.00 0.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
643 LBC 79 100.00 0.00 0.00 0.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
644 LBC 80 100.00 0.00 0.00 0.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
645 LBC 81 100.00 0.00 0.00 0.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
646 LBC 82 100.00 0.00 0.00 0.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
647 LBC 83 100.00 0.00 0.00 0.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
648 LBC 84 100.00 0.00 0.00 0.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
649 LBC 85 100.00 0.00 0.00 0.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
650 LBC 86 100.00 0.00 0.00 0.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
651 LBC 87 100.00 0.00 0.00 0.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
652 LBC 88 100.00 0.00 0.00 0.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
653 LBC 89 100.00 0.00 0.00 0.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
654 LBC 90 100.00 0.00 0.00 0.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
655 LBC 91 100.00 0.00 0.00 0.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
656 LBC 92 100.00 0.00 0.00 0.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
657 LBC 93 100.00 0.00 0.00 0.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
658 LBC 94 100.00 0.00 0.00 0.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
659 LBC 95 100.00 0.00 0.00 0.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
660 LBC 96 100.00 0.00 0.00 0.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
661 LBC 97 100.00 0.00 0.00 0.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
662 LBC 98 100.00 0.00 0.00 0.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
663 LBC 99 100.00 0.00 0.00 0.00 0.00 0.00
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
664 LBC 100 100.00 0.00 0.00 0.00 0.00 0.00
9
ab75c7ea49a5 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 0f75269223c0821c6c82acf98fde947d0f816f2b"
iuc
parents: 4
diff changeset
665 # ACGT raw counters for last fragments. Use `grep ^LTC | cut -f 2-` to extract this part. The columns are: A,C,G,T,N base counters
ab75c7ea49a5 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 0f75269223c0821c6c82acf98fde947d0f816f2b"
iuc
parents: 4
diff changeset
666 LTC 41 20 23 16 0
ab75c7ea49a5 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 0f75269223c0821c6c82acf98fde947d0f816f2b"
iuc
parents: 4
diff changeset
667 # ACGT content per cycle for barcodes. Use `grep ^BCC | cut -f 2-` to extract this part. The columns are: cycle; A,C,G,T base counts as a percentage of all A/C/G/T bases [%]; and N counts as a percentage of all A/C/G/T bases [%]
ab75c7ea49a5 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 0f75269223c0821c6c82acf98fde947d0f816f2b"
iuc
parents: 4
diff changeset
668 BCC1 2 0.00 0.00 100.00 0.00 0.00
ab75c7ea49a5 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 0f75269223c0821c6c82acf98fde947d0f816f2b"
iuc
parents: 4
diff changeset
669 BCC1 3 0.00 0.00 0.00 100.00 0.00
ab75c7ea49a5 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 0f75269223c0821c6c82acf98fde947d0f816f2b"
iuc
parents: 4
diff changeset
670 BCC1 4 0.00 100.00 0.00 0.00 0.00
ab75c7ea49a5 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 0f75269223c0821c6c82acf98fde947d0f816f2b"
iuc
parents: 4
diff changeset
671 BCC1 5 0.00 0.00 0.00 100.00 0.00
ab75c7ea49a5 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 0f75269223c0821c6c82acf98fde947d0f816f2b"
iuc
parents: 4
diff changeset
672 BCC1 6 100.00 0.00 0.00 0.00 0.00
ab75c7ea49a5 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 0f75269223c0821c6c82acf98fde947d0f816f2b"
iuc
parents: 4
diff changeset
673 BCC1 7 0.00 0.00 0.00 100.00 0.00
ab75c7ea49a5 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 0f75269223c0821c6c82acf98fde947d0f816f2b"
iuc
parents: 4
diff changeset
674 BCC1 8 0.00 100.00 0.00 0.00 0.00
ab75c7ea49a5 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 0f75269223c0821c6c82acf98fde947d0f816f2b"
iuc
parents: 4
diff changeset
675 # Barcode Qualities. Use `grep ^QTQ | cut -f 2-` to extract this part.
ab75c7ea49a5 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 0f75269223c0821c6c82acf98fde947d0f816f2b"
iuc
parents: 4
diff changeset
676 # Columns correspond to qualities and rows to barcode cycles. First column is the cycle number.
ab75c7ea49a5 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 0f75269223c0821c6c82acf98fde947d0f816f2b"
iuc
parents: 4
diff changeset
677 QTQ1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
ab75c7ea49a5 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 0f75269223c0821c6c82acf98fde947d0f816f2b"
iuc
parents: 4
diff changeset
678 QTQ1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
ab75c7ea49a5 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 0f75269223c0821c6c82acf98fde947d0f816f2b"
iuc
parents: 4
diff changeset
679 QTQ1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
ab75c7ea49a5 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 0f75269223c0821c6c82acf98fde947d0f816f2b"
iuc
parents: 4
diff changeset
680 QTQ1 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0
ab75c7ea49a5 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 0f75269223c0821c6c82acf98fde947d0f816f2b"
iuc
parents: 4
diff changeset
681 QTQ1 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0
ab75c7ea49a5 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 0f75269223c0821c6c82acf98fde947d0f816f2b"
iuc
parents: 4
diff changeset
682 QTQ1 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1
ab75c7ea49a5 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 0f75269223c0821c6c82acf98fde947d0f816f2b"
iuc
parents: 4
diff changeset
683 QTQ1 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1
ab75c7ea49a5 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 0f75269223c0821c6c82acf98fde947d0f816f2b"
iuc
parents: 4
diff changeset
684 QTQ1 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0
4
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
685 # Insert sizes. Use `grep ^IS | cut -f 2-` to extract this part. The columns are: insert size, pairs total, inward oriented pairs, outward oriented pairs, other pairs
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
686 IS 0 0 0 0 0
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
687 IS 1 0 0 0 0
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
688 IS 2 0 0 0 0
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
689 IS 3 0 0 0 0
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
690 IS 4 0 0 0 0
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
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691 IS 5 0 0 0 0
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diff changeset
777 IS 91 0 0 0 0
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
778 IS 92 0 0 0 0
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
779 IS 93 0 0 0 0
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
780 IS 94 0 0 0 0
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
781 IS 95 0 0 0 0
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
782 IS 96 0 0 0 0
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
783 IS 97 0 0 0 0
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
784 IS 98 0 0 0 0
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
785 IS 99 0 0 0 0
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
786 IS 100 0 0 0 0
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
787 IS 101 0 0 0 0
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
788 IS 102 0 0 0 0
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
789 IS 103 0 0 0 0
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
790 IS 104 0 0 0 0
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
791 IS 105 0 0 0 0
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
792 IS 106 0 0 0 0
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
793 IS 107 0 0 0 0
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
794 IS 108 0 0 0 0
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
795 IS 109 0 0 0 0
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
796 IS 110 0 0 0 0
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
797 IS 111 0 0 0 0
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
798 IS 112 0 0 0 0
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
799 IS 113 0 0 0 0
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
800 IS 114 0 0 0 0
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
801 IS 115 0 0 0 0
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
802 IS 116 0 0 0 0
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
803 IS 117 0 0 0 0
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
804 IS 118 0 0 0 0
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
805 IS 119 0 0 0 0
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
806 IS 120 0 0 0 0
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
807 IS 121 0 0 0 0
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
808 IS 122 0 0 0 0
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
809 IS 123 0 0 0 0
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
810 IS 124 0 0 0 0
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
811 IS 125 0 0 0 0
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
812 IS 126 0 0 0 0
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
813 IS 127 0 0 0 0
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
814 IS 128 0 0 0 0
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
815 IS 129 0 0 0 0
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
816 IS 130 0 0 0 0
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
817 IS 131 0 0 0 0
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
818 IS 132 0 0 0 0
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
819 IS 133 0 0 0 0
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
820 IS 134 0 0 0 0
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
821 IS 135 0 0 0 0
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
822 IS 136 0 0 0 0
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
823 IS 137 0 0 0 0
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
824 IS 138 0 0 0 0
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
825 IS 139 0 0 0 0
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
826 IS 140 0 0 0 0
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
827 IS 141 0 0 0 0
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
828 IS 142 0 0 0 0
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
829 IS 143 0 0 0 0
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
830 IS 144 0 0 0 0
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
831 IS 145 0 0 0 0
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
832 IS 146 0 0 0 0
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
833 IS 147 0 0 0 0
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
834 IS 148 0 0 0 0
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
835 IS 149 0 0 0 0
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
836 IS 150 0 0 0 0
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
837 IS 151 0 0 0 0
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
838 IS 152 0 0 0 0
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
839 IS 153 0 0 0 0
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
840 IS 154 0 0 0 0
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
841 IS 155 0 0 0 0
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
842 IS 156 0 0 0 0
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
843 IS 157 0 0 0 0
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
844 IS 158 0 0 0 0
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
845 IS 159 0 0 0 0
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
846 IS 160 0 0 0 0
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
847 IS 161 0 0 0 0
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
848 IS 162 0 0 0 0
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
849 IS 163 0 0 0 0
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
850 IS 164 0 0 0 0
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
851 IS 165 1 1 0 0
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
852 # Read lengths. Use `grep ^RL | cut -f 2-` to extract this part. The columns are: read length, count
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
853 RL 100 2
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
854 # Read lengths - first fragments. Use `grep ^FRL | cut -f 2-` to extract this part. The columns are: read length, count
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
855 FRL 100 1
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
856 # Read lengths - last fragments. Use `grep ^LRL | cut -f 2-` to extract this part. The columns are: read length, count
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
857 LRL 100 1
12
8fecc86e574a planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 9c5a35ce695c3d134e41d8695487edd5f71ea33c
iuc
parents: 9
diff changeset
858 # Mapping qualities for reads !(UNMAP|SECOND|SUPPL|QCFAIL|DUP). Use `grep ^MAPQ | cut -f 2-` to extract this part. The columns are: mapq, count
8fecc86e574a planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 9c5a35ce695c3d134e41d8695487edd5f71ea33c
iuc
parents: 9
diff changeset
859 MAPQ 7 1
8fecc86e574a planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 9c5a35ce695c3d134e41d8695487edd5f71ea33c
iuc
parents: 9
diff changeset
860 MAPQ 37 1
4
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
861 # Indel distribution. Use `grep ^ID | cut -f 2-` to extract this part. The columns are: length, number of insertions, number of deletions
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
862 ID 2 0 1
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
863 ID 3 1 0
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
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864 # Indels per cycle. Use `grep ^IC | cut -f 2-` to extract this part. The columns are: cycle, number of insertions (fwd), .. (rev) , number of deletions (fwd), .. (rev)
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
865 IC 90 1 0 0 0
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
866 IC 97 0 0 1 0
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
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diff changeset
867 # Coverage distribution. Use `grep ^COV | cut -f 2-` to extract this part.
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
868 COV [1-1] 1 134
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
869 COV [2-2] 2 31
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
parents:
diff changeset
870 # GC-depth. Use `grep ^GCD | cut -f 2-` to extract this part. The columns are: GC%, unique sequence percentiles, 10th, 25th, 50th, 75th and 90th depth percentile
8d500e0e0dbe planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 70b38ebad0d0936f102e3e7cb70f1060347ea8c4
iuc
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871 GCD 0.0 100.000 0.000 0.000 0.000 0.000 0.000