comparison samtools_split.xml @ 5:3570a794565c draft

"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_split commit 0f75269223c0821c6c82acf98fde947d0f816f2b"

4:229681b8c662

<tool id="samtools_split" name="Split" version="@TOOL_VERSION@">
    <description>BAM dataset on readgroups</description>
    <macros>
        <import>macros.xml</import>
    </macros>
    <expand macro="requirements"/>

    </outputs>
    <tests>
        <test>
            <param name="input_bam" value="phiX.bam" ftype="bam" />
            <output name="output">
                <discovered_dataset designation="Mouse" ftype="bam" file="phiX_Mouse.bam" />
                <discovered_dataset designation="Elephant" ftype="bam" file="phiX_Elephant.bam" />
                <discovered_dataset designation="Human" ftype="bam" file="phiX_Human.bam" />
            </output>
        </test>
    </tests>
    <help><![CDATA[
**What it does**

5:3570a794565c

<tool id="samtools_split" name="Samtools split" version="@TOOL_VERSION@" profile="@PROFILE@">
    <description>BAM dataset on readgroups</description>
    <macros>
        <import>macros.xml</import>
    </macros>
    <expand macro="requirements"/>

    </outputs>
    <tests>
        <test>
            <param name="input_bam" value="phiX.bam" ftype="bam" />
            <output name="output">
                <discovered_dataset designation="Mouse" ftype="bam" file="phiX_Mouse.bam" lines_diff="4" />
                <discovered_dataset designation="Elephant" ftype="bam" file="phiX_Elephant.bam" lines_diff="4" />
                <discovered_dataset designation="Human" ftype="bam" file="phiX_Human.bam" lines_diff="4" />
            </output>
        </test>
    </tests>
    <help><![CDATA[
**What it does**