# HG changeset patch
# User iuc
# Date 1564339693 14400
# Node ID 56838051b6733fb8471deded964ba66945baae6c
# Parent  20fea18b28300119d23355e25e99ab8ab0b7aed8
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_idxstats commit a972815cbd43dea553b3c0e4ad548f35d0023228-dirty

diff -r 20fea18b2830 -r 56838051b673 samtools_idxstats.xml
--- a/samtools_idxstats.xml	Thu Sep 27 08:58:41 2018 -0400
+++ b/samtools_idxstats.xml	Sun Jul 28 14:48:13 2019 -0400
@@ -7,8 +7,9 @@
     <expand macro="stdio"/>
     <expand macro="version_command"/>
     <command><![CDATA[
-        @PREPARE_IDX@
-        samtools idxstats infile > '${output}'
+@ADDTHREADS@
+@PREPARE_IDX@
+samtools idxstats -@ \$addthreads infile  > '${output}'
     ]]></command>
     <inputs>
         <param name="input" type="data" format="bam,cram" label="BAM file" />