Mercurial > repos > devteam > samtools_flagstat

view test-data/samtools_flagstat_out1.txt @ 4:10b658bef71a draft

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planemo upload commit 33927a87ba2eee9bf0ecdd376a66241b17b3d734
author devteam
date Tue, 13 Oct 2015 12:54:34 -0400
parents 480404be9626
children 28eb6a47be96
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200 + 0 in total (QC-passed reads + QC-failed reads)
0 + 0 secondary
0 + 0 supplementary
0 + 0 duplicates
25 + 0 mapped (12.50%:nan%)
200 + 0 paired in sequencing
100 + 0 read1
100 + 0 read2
0 + 0 properly paired (0.00%:nan%)
0 + 0 with itself and mate mapped
25 + 0 singletons (12.50%:nan%)
0 + 0 with mate mapped to a different chr
0 + 0 with mate mapped to a different chr (mapQ>=5)